BLASTX nr result
ID: Ephedra26_contig00002398
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00002398
(905 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002963163.1| hypothetical protein SELMODRAFT_141493 [Sela... 76 2e-11
ref|XP_002981625.1| hypothetical protein SELMODRAFT_114787 [Sela... 76 2e-11
ref|XP_001779367.1| predicted protein [Physcomitrella patens] gi... 64 1e-07
ref|NP_001141474.1| Replication protein A DNA-binding subunit [Z... 62 4e-07
ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [S... 61 5e-07
emb|CAN80780.1| hypothetical protein VITISV_011466 [Vitis vinifera] 61 5e-07
ref|XP_003633189.1| PREDICTED: LOW QUALITY PROTEIN: replication ... 61 7e-07
ref|XP_003633177.1| PREDICTED: LOW QUALITY PROTEIN: replication ... 61 7e-07
emb|CBI24098.3| unnamed protein product [Vitis vinifera] 61 7e-07
emb|CBI36562.3| unnamed protein product [Vitis vinifera] 61 7e-07
ref|XP_004985197.1| PREDICTED: replication protein A 70 kDa DNA-... 60 9e-07
gb|AFW77236.1| hypothetical protein ZEAMMB73_509278 [Zea mays] 60 9e-07
ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-... 60 9e-07
ref|XP_001951063.1| PREDICTED: replication protein A 70 kDa DNA-... 60 9e-07
ref|XP_006280119.1| hypothetical protein CARUB_v10026014mg, part... 60 1e-06
ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arab... 60 1e-06
gb|ACG44315.1| replication protein A 70 kDa DNA-binding subunit ... 60 1e-06
dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea... 60 1e-06
gb|EMT13867.1| Replication protein A 70 kDa DNA-binding subunit ... 60 1e-06
gb|EMS53693.1| Replication protein A 70 kDa DNA-binding subunit ... 60 1e-06
>ref|XP_002963163.1| hypothetical protein SELMODRAFT_141493 [Selaginella moellendorffii]
gi|300168431|gb|EFJ35034.1| hypothetical protein
SELMODRAFT_141493 [Selaginella moellendorffii]
Length = 566
Score = 75.9 bits (185), Expect = 2e-11
Identities = 38/100 (38%), Positives = 53/100 (53%)
Frame = -2
Query: 889 ASFLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCY 710
A F V A +S + WYTAC C +K ++ + ++C AC DT + Y
Sbjct: 411 AYFTVRACISYIKPDQTMWYTACSTCNRKVSE-------DSSRFWCEACQRHFDTASRRY 463
Query: 709 NLRVKLQDDNSDLWVTVFNDTAEQLLGVKASDLATLMETD 590
+ KL D + D WV+ FND AEQ+LGV A +LAT+ D
Sbjct: 464 IMLAKLTDHSGDAWVSFFNDQAEQILGVSADELATIKSQD 503
>ref|XP_002981625.1| hypothetical protein SELMODRAFT_114787 [Selaginella moellendorffii]
gi|300150791|gb|EFJ17440.1| hypothetical protein
SELMODRAFT_114787 [Selaginella moellendorffii]
Length = 566
Score = 75.9 bits (185), Expect = 2e-11
Identities = 38/100 (38%), Positives = 53/100 (53%)
Frame = -2
Query: 889 ASFLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCY 710
A F V A +S + WYTAC C +K ++ + ++C AC DT + Y
Sbjct: 411 AYFTVRACISYIKPDQTMWYTACSTCNRKVSE-------DSSRFWCEACQRHFDTASRRY 463
Query: 709 NLRVKLQDDNSDLWVTVFNDTAEQLLGVKASDLATLMETD 590
+ KL D + D WV+ FND AEQ+LGV A +LAT+ D
Sbjct: 464 IMLAKLTDHSGDAWVSFFNDQAEQILGVSADELATIKSQD 503
>ref|XP_001779367.1| predicted protein [Physcomitrella patens]
gi|162669165|gb|EDQ55757.1| predicted protein
[Physcomitrella patens]
Length = 451
Score = 63.5 bits (153), Expect = 1e-07
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F V A +S + WY AC C +K + S Y+C C N D + Y +
Sbjct: 299 FNVRAYISFIKPDQAMWYLACQTCNRKVVEQSSSS------YWCEGCQNHYDKCSRRYIM 352
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDLATLMET--DLPAYEDVYYKSRFQ 548
+ KL D + + WV+ FN+ AE LLGV A +L+ + D Y++ K+ +Q
Sbjct: 353 QAKLSDSSGEAWVSAFNEQAESLLGVSADNLSEMRNQAGDDNQYQNAVRKAMWQ 406
>ref|NP_001141474.1| Replication protein A DNA-binding subunit [Zea mays]
gi|194704722|gb|ACF86445.1| unknown [Zea mays]
gi|195647462|gb|ACG43199.1| replication protein A 70 kDa
DNA-binding subunit [Zea mays]
gi|413956552|gb|AFW89201.1| Replication protein A
DNA-binding subunit [Zea mays]
Length = 623
Score = 61.6 bits (148), Expect = 4e-07
Identities = 29/91 (31%), Positives = 46/91 (50%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F + A++S+ + WY AC C KK + G Y+C C +L Y +
Sbjct: 469 FSLYAIISHIKPDQNMWYRACTTCNKKVTEAFG------SGYWCEGCQKNYSECSLRYIM 522
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDL 611
+KL D + WV+VFN+ AE+++G A +L
Sbjct: 523 VIKLSDPTGEAWVSVFNEHAEKIIGCSADEL 553
>ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [Sorghum bicolor]
gi|241922132|gb|EER95276.1| hypothetical protein
SORBIDRAFT_01g042890 [Sorghum bicolor]
Length = 623
Score = 61.2 bits (147), Expect = 5e-07
Identities = 28/91 (30%), Positives = 47/91 (51%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F ++A++S+ + WY AC C KK + G Y+C C +L Y +
Sbjct: 469 FSLNAIISHIKPDQNMWYRACKTCNKKVTEAFG------SGYWCEGCQKNDSECSLRYIM 522
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDL 611
+K+ D + WV+VFN+ AE+++G A +L
Sbjct: 523 VLKISDPTGEAWVSVFNEHAEKIIGCSADEL 553
>emb|CAN80780.1| hypothetical protein VITISV_011466 [Vitis vinifera]
Length = 280
Score = 61.2 bits (147), Expect = 5e-07
Identities = 31/99 (31%), Positives = 46/99 (46%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F + A +S + WY AC C KK G Y+C C D +L Y +
Sbjct: 133 FSIRAYISFIKPDQTMWYRACKTCNKKVTDAIG------SEYWCEGCQKNDDECSLRYIM 186
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDLATLMETDL 587
VK+ D + + W+++FND AE++ G A +L L L
Sbjct: 187 VVKVSDASGEAWLSLFNDQAERIFGCSADELDKLKSQKL 225
>ref|XP_003633189.1| PREDICTED: LOW QUALITY PROTEIN: replication factor A protein 1-like
[Vitis vinifera]
Length = 390
Score = 60.8 bits (146), Expect = 7e-07
Identities = 30/94 (31%), Positives = 45/94 (47%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F + A +S + WY AC C KK G Y+C C D +L Y +
Sbjct: 234 FSIRAYISFIKPDQTMWYRACKTCNKKVTDAIG------SEYWCEGCQKNDDECSLRYIM 287
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDLATL 602
VK+ D + + W+++FND AE++ G A +L L
Sbjct: 288 VVKVSDASGEAWLSLFNDQAERIFGCSADELDKL 321
>ref|XP_003633177.1| PREDICTED: LOW QUALITY PROTEIN: replication factor A protein 1-like
[Vitis vinifera]
Length = 448
Score = 60.8 bits (146), Expect = 7e-07
Identities = 30/94 (31%), Positives = 45/94 (47%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F + A +S + WY AC C KK G Y+C C D +L Y +
Sbjct: 292 FSIRAYISFIKPDQTMWYRACKTCNKKVTDAIG------SGYWCEGCQKNDDECSLRYIM 345
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDLATL 602
VK+ D + + W+++FND AE++ G A +L L
Sbjct: 346 VVKVSDASGEAWLSLFNDQAERIFGCSADELDKL 379
>emb|CBI24098.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 60.8 bits (146), Expect = 7e-07
Identities = 30/94 (31%), Positives = 45/94 (47%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F + A +S + WY AC C KK G Y+C C D +L Y +
Sbjct: 25 FSIRAYISFIKPDQTMWYRACKTCNKKVTDAIG------SEYWCEGCQKNDDECSLRYIM 78
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDLATL 602
VK+ D + + W+++FND AE++ G A +L L
Sbjct: 79 VVKVSDASGEAWLSLFNDQAERIFGCSADELDKL 112
>emb|CBI36562.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 60.8 bits (146), Expect = 7e-07
Identities = 30/94 (31%), Positives = 45/94 (47%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F + A +S + WY AC C KK G Y+C C D +L Y +
Sbjct: 25 FSIRAYISFIKPDQTMWYRACKTCNKKVTDAIG------SGYWCEGCQKNDDECSLRYIM 78
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDLATL 602
VK+ D + + W+++FND AE++ G A +L L
Sbjct: 79 VVKVSDASGEAWLSLFNDQAERIFGCSADELDKL 112
>ref|XP_004985197.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Setaria italica]
Length = 623
Score = 60.5 bits (145), Expect = 9e-07
Identities = 28/91 (30%), Positives = 47/91 (51%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F ++A++S+ + WY AC C KK + G Y+C C +L Y +
Sbjct: 469 FSLNAIISHIKPDQNMWYRACKTCNKKVTEAVGGG------YWCEGCNKNDAECSLRYIM 522
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDL 611
+K+ D + WV+VFN+ AE+++G A +L
Sbjct: 523 VIKVSDPTGEAWVSVFNEHAERIIGCSADEL 553
>gb|AFW77236.1| hypothetical protein ZEAMMB73_509278 [Zea mays]
Length = 464
Score = 60.5 bits (145), Expect = 9e-07
Identities = 28/91 (30%), Positives = 48/91 (52%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F + A++S+ + WY AC+ C KK + + Y+C C +L Y +
Sbjct: 303 FSLYAIISHIKPDQIMWYRACMTCNKKVTEVF------RSGYWCEGCQKNDSECSLRYIM 356
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDL 611
+K+ D S+ WV+VFN+ AE+++G A +L
Sbjct: 357 VIKVSDPTSEAWVSVFNEHAEKIIGCNADEL 387
>ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Brachypodium distachyon]
Length = 635
Score = 60.5 bits (145), Expect = 9e-07
Identities = 27/91 (29%), Positives = 46/91 (50%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F ++A +S+ + WY AC C KK + G Y+C C + L Y +
Sbjct: 481 FSLNAYISHIKPDQTMWYRACKTCNKKVTEAVG------SGYWCEGCQKNYEECMLRYIM 534
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDL 611
+K+ D + W+++FND AE+++G A +L
Sbjct: 535 AIKVSDPTGEAWLSLFNDQAERIVGCSADEL 565
>ref|XP_001951063.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Acyrthosiphon pisum]
Length = 609
Score = 60.5 bits (145), Expect = 9e-07
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Frame = -2
Query: 796 KPDGPSKGEQQN---YFCYACTNTSDTTTLCYNLRVKLQDDNSDLWVTVFNDTAEQLLGV 626
KPD K +N Y C C + ++ L +L D + WVT+F +TAE LLG
Sbjct: 471 KPDCQKKVIDRNDGTYRCEKCNDETENFKYRLMLSAQLSDSTGNQWVTMFQETAESLLGT 530
Query: 625 KASDLATLMETDLPAYEDVYYKSRFQAINTHVIINVTPFEERDHKQFVMQSFRELDTNID 446
+++L LME Y DV+ F+ + + + + + S + +D +
Sbjct: 531 TSAELGRLMEESKEEYSDVFQNQMFKLFDIRARAKMETYNNETRLKVTLFSIKPIDYKVA 590
Query: 445 PVEEFEGIKLLMGL 404
+ IK L G+
Sbjct: 591 STKLIATIKRLSGI 604
>ref|XP_006280119.1| hypothetical protein CARUB_v10026014mg, partial [Capsella rubella]
gi|482548823|gb|EOA13017.1| hypothetical protein
CARUB_v10026014mg, partial [Capsella rubella]
Length = 680
Score = 60.1 bits (144), Expect = 1e-06
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F A VS + WY AC C KK ++ Y+C C + +L Y +
Sbjct: 523 FSTRAYVSFIKPDQTMWYQACKTCNKKV------TEALDSGYWCEGCQKKYEECSLRYIM 576
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDLATLMETDLPAYEDVYYKSRFQAI--NTHV 530
VK+ D + + W++ FND AE++LG A +L L + E Y++R + ++HV
Sbjct: 577 AVKVTDSSGETWISSFNDEAEKILGCSADELNKLRSEEGEVNE---YQTRLKEATWSSHV 633
Query: 529 I-INVTPFEERDHKQ 488
++VT E K+
Sbjct: 634 FRVSVTQNEYNGEKR 648
>ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
lyrata] gi|297312244|gb|EFH42668.1| hypothetical protein
ARALYDRAFT_496254 [Arabidopsis lyrata subsp. lyrata]
Length = 631
Score = 60.1 bits (144), Expect = 1e-06
Identities = 30/94 (31%), Positives = 45/94 (47%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F A +S + WY AC C KK ++ Y+C C + +L Y +
Sbjct: 474 FSTRAYISFIKPDQTMWYQACKTCNKKV------TEALDSGYWCEGCQKKYEECSLRYIM 527
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDLATL 602
VK+ D + + W++ FND AE++LG A DL L
Sbjct: 528 AVKVTDSSGETWISSFNDEAEKILGCSADDLNKL 561
>gb|ACG44315.1| replication protein A 70 kDa DNA-binding subunit [Zea mays]
Length = 618
Score = 60.1 bits (144), Expect = 1e-06
Identities = 29/91 (31%), Positives = 45/91 (49%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F + A +S+ + WY AC C KK + G Y+C C +L Y +
Sbjct: 464 FSLYATISHIKPDQNMWYRACKTCNKKVTETFG------SGYWCEGCQKNDSECSLRYIM 517
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDL 611
VK+ D + WV+VFN+ AE+++G A +L
Sbjct: 518 VVKVSDPTGEAWVSVFNEHAEKIIGCSADEL 548
>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
Length = 604
Score = 60.1 bits (144), Expect = 1e-06
Identities = 28/98 (28%), Positives = 48/98 (48%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F + A +S ++ WY AC C KK + G Y+C C +L Y +
Sbjct: 448 FSIKANISFIKPEQAMWYRACKTCNKKVTEAIG------SGYWCEGCQKNDTDCSLRYIV 501
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDLATLMETD 590
+++ D + + W++VFN+ AE+++G A +L L D
Sbjct: 502 AMRVSDTSGEAWLSVFNEQAEKIIGCSADELDRLRSQD 539
>gb|EMT13867.1| Replication protein A 70 kDa DNA-binding subunit [Aegilops
tauschii]
Length = 600
Score = 59.7 bits (143), Expect = 1e-06
Identities = 27/91 (29%), Positives = 46/91 (50%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F + A +SN + WY AC C KK + G ++C C + +L Y +
Sbjct: 446 FSLYANISNIKPDQTMWYRACTTCNKKVTEALG------SGFWCEGCQKNYEQCSLRYIM 499
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDL 611
+K+ D + W+++FND AE+++G A +L
Sbjct: 500 VIKVSDPTGEAWLSLFNDQAERIVGCSADEL 530
>gb|EMS53693.1| Replication protein A 70 kDa DNA-binding subunit [Triticum urartu]
Length = 592
Score = 59.7 bits (143), Expect = 1e-06
Identities = 27/91 (29%), Positives = 46/91 (50%)
Frame = -2
Query: 883 FLVSAMVSNFDMQRPQWYTACVLCKKKYNKPDGPSKGEQQNYFCYACTNTSDTTTLCYNL 704
F + A +SN + WY AC C KK + G ++C C + +L Y +
Sbjct: 438 FSLYANISNIKPDQTMWYRACTTCNKKVTEALG------SGFWCEGCQKNYEQCSLRYIM 491
Query: 703 RVKLQDDNSDLWVTVFNDTAEQLLGVKASDL 611
+K+ D + W+++FND AE+++G A +L
Sbjct: 492 VIKVSDPTGEAWLSLFNDQAERIVGCSADEL 522