BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00002029
         (3823 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                               794   0.0  
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...   748   0.0  
emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He...   632   e-178
gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   627   e-177
gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   627   e-177
emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-dir...   605   e-170
gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]       587   e-164
gb|EHJ71507.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   538   e-150
ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366...   537   e-149
emb|CDJ96637.1| Endonuclease exonuclease phosphatase and RNA-dir...   493   e-136
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   489   e-135
emb|CDJ97473.1| Endonuclease exonuclease phosphatase and RNA-dir...   453   e-124
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...   433   e-118
gb|EMT31191.1| Disease resistance RPP8-like protein 3 [Aegilops ...   411   e-111
emb|CDJ81301.1| unnamed protein product [Haemonchus contortus]        403   e-109
ref|XP_003638432.1| Craniofacial development protein [Medicago t...   369   4e-99
emb|CCH50954.1| T1.2 [Malus x robusta]                                363   4e-97
emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcripta...   361   1e-96
emb|CDJ93360.1| RNA-directed DNA polymerase (reverse transcripta...   354   2e-94
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]         349   5e-93

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  794 bits (2051), Expect = 0.0
 Identities = 393/725 (54%), Positives = 501/725 (69%), Gaps = 39/725 (5%)
 Frame = +2

Query: 1529 MNPIITYTDARAFPVSDALRLPPGV-SKNGQGASHRRPGAMINEQG-------------- 1663
            MNP      ARA PVS AL  P  V S+ G    HR P A++NEQG              
Sbjct: 1    MNPEQNRAKARASPVSGALCGPSTVISEQGSLYLHRHPDAVLNEQGGHRNFFSNDSTQSC 60

Query: 1664 ----------------FLHQSGRVRVKK-----QVQDSSLRLATWNIGTLSGKGMELVDT 1780
                            +     R RVKK     +VQ S +RL TWNIGTL+GK ME+V+ 
Sbjct: 61   LGAYAPINFTRDTQKKYFDPIRRGRVKKLGQKGRVQKSKMRLGTWNIGTLTGKSMEVVEV 120

Query: 1781 MLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHRNGVGIVVDKNLKNDIVTVIR 1960
            M+RR++NI CLQETKWVG KA+++EN+GFK++Y+G HR RNGVGI+VDK L  D+V V R
Sbjct: 121  MVRRRINIMCLQETKWVGSKAKDLENSGFKLWYSGTHRTRNGVGIIVDKTLVQDVVDVKR 180

Query: 1961 RGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQMDELIQEIPASEKIYIGGDF 2140
             GDR++ +K+V+ + +IN+ISAYAPQVGLD  +K +FWE + +L+Q I  +EK++IGGD 
Sbjct: 181  VGDRIMAIKIVIRQELINVISAYAPQVGLDTSSKEKFWEDLGDLVQGIAQTEKLFIGGDL 240

Query: 2141 NGHVGEDHLGYEMVHGGYGIGDRNDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSGT 2320
            NGHVG +   Y   HGG+G G+RN+ GE+ILDFAMAY L L NT+FKKR EH+IT+KSG+
Sbjct: 241  NGHVGRETGNYRGFHGGHGFGERNEDGEAILDFAMAYDLFLANTFFKKREEHVITYKSGS 300

Query: 2321 NKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDIKIKKQYRARKEKINPRTKWW 2500
            +K+QIDF + RKGDR+TCKDCKVIPGES+  QHR++VMD+ IK+  +  K    PRT+WW
Sbjct: 301  SKTQIDFLLMRKGDRITCKDCKVIPGESVANQHRLLVMDVLIKRVRQKNKTWKCPRTRWW 360

Query: 2501 NLKGEKLELFKNKILKEAPWNIEDETNTMWNKMAACIRGVSKEILGESKGRGPQFKETWW 2680
            NLK EK  +FK K++ +  W+ E E + MW+ MA+CIR V+KE+LGESKG  P  KE+WW
Sbjct: 361  NLKEEKQAIFKEKVITQCVWDREGEASQMWDSMASCIRKVAKEVLGESKGFAPHQKESWW 420

Query: 2681 WNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTL 2860
            WNEEVQ  VK K+EC K   + R+ E+ E            V EAK  AYDD+Y +L T 
Sbjct: 421  WNEEVQTKVKAKKECCKALYKDRTDENGERYRKAKQEAKKAVREAKLAAYDDMYKRLDTK 480

Query: 2861 EGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEIKERWKSYFEKLLN---EENG 3031
            EGE  IYK+A+ R++KT+DL+ ++CIK ED +VL  +  +K+RW+ YF  L N   E + 
Sbjct: 481  EGELDIYKLARAREKKTRDLNQVRCIKDEDGKVLATENAVKDRWRGYFHNLFNEGHERSA 540

Query: 3032 DRQNMEEPREIRPNTFFRRIRTSEVRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWIT 3211
                +    E R  +F+RRIR  EV  ALKKMK  +A+GPD IPIEVWK LGE G++W+T
Sbjct: 541  SLWELSNSEECRNYSFYRRIRKEEVVVALKKMKHRKAIGPDDIPIEVWKVLGETGITWLT 600

Query: 3212 KMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKLISHTMKLWERVIEHRLRM 3391
             +FN+I+ TK+MP+EWR S LVPIYKNKGD+Q C NYRGIKL+SHTMKLWERVIEHRLR 
Sbjct: 601  DLFNRILKTKKMPNEWRTSTLVPIYKNKGDVQNCMNYRGIKLMSHTMKLWERVIEHRLRQ 660

Query: 3392 ETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXXDLHMIFIDLEKAYDRVPRDLIWWV 3571
            ET VS+NQFGFMPGRST EAI               DLHM+FIDLEKAYDRVPRD++W +
Sbjct: 661  ETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAYDRVPRDILWRI 720

Query: 3572 LNKKG 3586
            L KKG
Sbjct: 721  LEKKG 725


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score =  748 bits (1932), Expect = 0.0
 Identities = 387/778 (49%), Positives = 503/778 (64%), Gaps = 11/778 (1%)
 Frame = +2

Query: 1523 YDMNPIITYTDARAFPVSDALRLPPGVSKNGQGASHRRPGAMINEQGFLHQSGRVRVKKQ 1702
            +DMN       AR+ P S+A      VSK  Q   HR P  ++NEQGF     R RV K 
Sbjct: 428  HDMNQRHYCAKARSLPGSNAPYGSSTVSK--QEPLHRCPDVVLNEQGFSRFRERTRVNKL 485

Query: 1703 VQ--------DSSLRLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAREIEN 1858
            V         D  LR  TWNIGTL+GK ME+VDTM RRK+NI CLQETKWVG KARE++ 
Sbjct: 486  VHKGKGKGRSDRRLRFGTWNIGTLTGKSMEVVDTMTRRKINIMCLQETKWVGAKARELDT 545

Query: 1859 TGFKIFYTGKHRHRNGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQ 2038
            +GFK++YTGK ++RNGVGI+VDK  K D+V V R GDR+I +KLV+     ++ISAYAPQ
Sbjct: 546  SGFKLWYTGKVKNRNGVGIIVDKQWKKDVVDVKRVGDRIISIKLVVEGGAFHVISAYAPQ 605

Query: 2039 VGLDEFTKVQFWEQMDELIQEIPASEKIYIGGDFNGHVGEDHLGYEMVHGGYGIGDRNDL 2218
            VG DE  K+ FWE ++ L+Q IP  +KI++GGD NGHVG +  GY  +HGG+G G  N  
Sbjct: 606  VGSDEQHKISFWEDLESLVQGIPLGDKIFLGGDLNGHVGREVTGYGSIHGGHGFGVINAE 665

Query: 2219 GESILDFAMAYGLVLVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPG 2398
            G++ILDF+  + L++ NT FKKR EHLIT+KSG   SQIDFF+ R+ DR  C +CK+IPG
Sbjct: 666  GKTILDFSSTFDLLIANTCFKKRDEHLITYKSGMTSSQIDFFLLRRVDRKFCINCKIIPG 725

Query: 2399 ESLTTQHRIMVMDIKIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDET 2578
            ESLTTQHR++V+D +++++ R R    NPRT+WW +KGE+   F  ++ +EA W+     
Sbjct: 726  ESLTTQHRVLVLDFRVEQKLRKRHHTKNPRTRWWRMKGEEQRSFLRRVGEEAKWDGNGSA 785

Query: 2579 NTMWNKMAACIRGVSKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKE 2758
              MW +MA  IR  +KE  GESKG GP+ KE+WWWN  +Q  +K KRECFK W   R+ +
Sbjct: 786  EEMWREMAEVIRRTAKESFGESKGIGPRDKESWWWNASIQEKIKIKRECFKEWSLCRNVD 845

Query: 2759 SFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCI 2938
            ++E            VSEA+++AY+ LY  L T EGEK IY+IAK R+R+T+DL  +KCI
Sbjct: 846  NWEKYKAAKKETKVAVSEARTRAYEGLYQSLDTKEGEKGIYRIAKSRERRTRDLDQVKCI 905

Query: 2939 KSEDSRVLVKDEEIKERWKSYFEKLLNEENGDRQNMEE--PREIRPN-TFFRRIRTSEVR 3109
            K +D  VL ++E+I ERWKSYF +L NE      ++     RE   N  ++RRIR  EV+
Sbjct: 906  KDKDREVLAQEEKINERWKSYFYELFNEGQKTLPSLGRLCTREEDQNFNYYRRIRDFEVK 965

Query: 3110 AALKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYK 3289
             ALK+MK GRA+GPD IPIEVWK LG  G++W+TK+F +I+ +K+MPDEWRKS LVPIY+
Sbjct: 966  EALKQMKNGRAVGPDNIPIEVWKGLGGKGINWLTKLFYEILRSKKMPDEWRKSTLVPIYR 1025

Query: 3290 NKGDIQCCSNYRGIKLISHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAIXXXXX 3469
             KGDIQ C NYRGIKL+SHTMKLW +                     G  T         
Sbjct: 1026 IKGDIQSCGNYRGIKLMSHTMKLWGK---------------------GDRT--------- 1055

Query: 3470 XXXXXXXXXXDLHMIFIDLEKAYDRVPRDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVR 3649
                             ++EK   R     +W VL K+ V   YI  IKDMY+GA T V+
Sbjct: 1056 -----------------EVEKRDTRYQGRFLWKVLEKRRVRIAYIRAIKDMYEGATTSVK 1098

Query: 3650 TTAGESREFPITVGLHQGSALSPYLFALIMDELTRQIQDEVPQCMLFADDIVLVDETK 3823
            T  G + EFPI +GLHQGS+LSPYLF L+++ LT  IQ+ VP CMLFADDIVL+ E++
Sbjct: 1099 TQGGVTEEFPIGIGLHQGSSLSPYLFTLVLEVLTEHIQEPVPWCMLFADDIVLMGESR 1156


>emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene]
          Length = 990

 Score =  632 bits (1629), Expect = e-178
 Identities = 323/738 (43%), Positives = 459/738 (62%), Gaps = 4/738 (0%)
 Frame = +2

Query: 1622 ASHRRPGAMINEQGFLHQSGRVRVKKQVQDSSLRLATWNIGTLSGKGMELVDTMLRRKVN 1801
            A   RP   I+ QG   Q  R R+K +V    LR ATWNIG+L+G+  EL D ++RR+V 
Sbjct: 20   AQAHRPTPAISGQGLPCQV-RARLKTRVPRQKLRFATWNIGSLTGRCRELADVLMRRRVQ 78

Query: 1802 IACLQETKWVGEKAREIENTGFKIFYTGKHRHRNGVGIVVDKNLKNDIVTVIRRGDRLIL 1981
             A LQET+W G K+R I   G+++ YTG    RNGV +V+ + L+N ++ V RR DRL+ 
Sbjct: 79   CAFLQETRWKGNKSRNI-GQGYRLIYTGSPSGRNGVAVVLSEELQNGLLEVDRRSDRLMR 137

Query: 1982 VKLVLGENIINIISAYAPQVGLDEFTKVQFWEQMDELIQEIPASEKIYIGGDFNGHVGED 2161
            V++++   I N+ISAYAPQ G     K  FWEQ + ++  +P++E + +GGD NGHVG  
Sbjct: 138  VRVLIEGVITNLISAYAPQAGCSASEKETFWEQYEGVLLAVPSTELVLVGGDLNGHVGRA 197

Query: 2162 HLGYEMVHGGYGIGDRNDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSGTNKSQIDF 2341
               YE VHGG+G G RN  GE+IL   +A  L +VNT+F+K  +HLIT+K G++ +QID+
Sbjct: 198  AEPYERVHGGFGHGLRNAEGENILRTCIASDLAVVNTFFQKNSQHLITYKCGSHSTQIDY 257

Query: 2342 FITRKGDRLTCKDCKVIPGESLTTQHRIMVMDIKIKKQYRARKEKINPRTKWWNLKGEKL 2521
             +TR+       +CKVIPGESLT QHR++VMD  +  + R   EK  PR KWW L G   
Sbjct: 258  LLTRRCHMGRVTNCKVIPGESLTAQHRLLVMDFNVTPK-RKVAEKRRPRIKWWLLNGPMQ 316

Query: 2522 ELFKNKILKEAPWNIEDETNT---MWNKMAACIRGVSKEILGESKGRGPQFKETWWWNEE 2692
              F  ++      N+   T T    W++  + I    + +LG S+G     KETWWWN+E
Sbjct: 317  TDFLAEVKSH---NLSTNTETAQEAWDRAQSAIIAAGRRVLGVSRGGRVIDKETWWWNDE 373

Query: 2693 VQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEK 2872
            VQ V + K+  FK WQ++ S E               V+ A+S++   LY KL T+EG+K
Sbjct: 374  VQEVTREKKAAFKKWQESNSPEDRLEYTVAKRASKRAVARARSESLSPLYDKLETVEGQK 433

Query: 2873 IIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEIKERWKSYFEKLLNEENGDRQNMEE 3052
            +IYK+A+ RD+ T+D+    C++     +L   + +KERW+SYF++LLN ++    + + 
Sbjct: 434  LIYKLARSRDKVTQDIAKCLCVRDSQGTLLCNHDSVKERWRSYFQELLNTQHPCSLHHDP 493

Query: 3053 PREIRPNT-FFRRIRTSEVRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKI 3229
            P    PN      I   E R  L++MK G+A+GPD IPIE WK LG  GV  +T +FN I
Sbjct: 494  P----PNLGLIAPITLDETRNCLRRMKNGKAVGPDDIPIEAWKSLGSLGVLMLTDLFNHI 549

Query: 3230 IMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKLISHTMKLWERVIEHRLRMETNVSE 3409
            + T +MP +WR S + PIYK +G +Q C +YRGIKL+SHTMKL+ER+I+ RLR E  VSE
Sbjct: 550  LNTGKMPHQWRLSFITPIYKGRGSVQDCGSYRGIKLMSHTMKLFERMIDLRLRRECTVSE 609

Query: 3410 NQFGFMPGRSTTEAIXXXXXXXXXXXXXXXDLHMIFIDLEKAYDRVPRDLIWWVLNKKGV 3589
            +Q+GF PG  T +AI                LH+ F+DL+KA+D VPR  IWW L  KG+
Sbjct: 610  SQYGFQPGSGTMDAIFALRTLMEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRSKGI 669

Query: 3590 TSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFALIMDELTRQIQDE 3769
               YI++I+ MY  + ++VRT  G++R FPITVG+HQGSALSP+LF +++D ++  IQD+
Sbjct: 670  PEAYIEIIRGMYHDSASMVRTAVGDTRPFPITVGVHQGSALSPFLFNVVLDTVSAHIQDQ 729

Query: 3770 VPQCMLFADDIVLVDETK 3823
             P  M++ADDI L+ E +
Sbjct: 730  PPWLMMYADDIALIAENR 747


>gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 1253

 Score =  627 bits (1618), Expect = e-177
 Identities = 326/760 (42%), Positives = 465/760 (61%), Gaps = 4/760 (0%)
 Frame = +2

Query: 1556 ARAFPVSDALRLPPGVSKNGQGASHRRPGAMINEQGFLHQSGRVRVKKQVQDSSLRLATW 1735
            ARA P++DA    P  + +GQG               L    R R+K  V    LR ATW
Sbjct: 279  ARASPINDAQAHRPTPAISGQG---------------LPCQVRARLKTLVPQRKLRFATW 323

Query: 1736 NIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHRNGVGI 1915
            NIG+L+G+  EL D ++RR+V  A LQET+W G K+R I   G+++ YTG    + GV +
Sbjct: 324  NIGSLTGRCRELADVLMRRRVQCAFLQETRWKGNKSRNI-GQGYRLIYTGSPSGKAGVAV 382

Query: 1916 VVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQMDELI 2095
            V+ + L+N ++ V RR DRL+ V++++   I N+ISAY PQ G     K  FWEQ +E++
Sbjct: 383  VLSEELRNGLLEVDRRCDRLMRVRVLIEGVITNLISAYTPQAGCSGSEKESFWEQFEEVL 442

Query: 2096 QEIPASEKIYIGGDFNGHVGEDHLGYEMVHGGYGIGDRNDLGESILDFAMAYGLVLVNTY 2275
            + IPA+E I +GGD NGHVG     ++ VHGG+G G RN  GE+IL   +A  L +VNT+
Sbjct: 443  RAIPAAEVIIVGGDLNGHVGRAAETFDRVHGGFGYGRRNAEGENILRTCIASDLAVVNTF 502

Query: 2276 FKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDIKIKKQ 2455
            F+K  +HLIT+KSG++ +QID+ +TR+       +CKVIPGESLT QHR++VMD  +  +
Sbjct: 503  FQKTPQHLITYKSGSHSTQIDYLLTRRCHISKVTNCKVIPGESLTAQHRLLVMDYVVTPK 562

Query: 2456 YRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNT---MWNKMAACIRGVSK 2626
             +   EK  PR +WW L G     F+ ++  +   N+   T T   +W++  + I    K
Sbjct: 563  KKV-AEKRKPRIRWWLLNGTMQTSFRAEVESQ---NLSTNTETAQEVWDRAQSAIITAGK 618

Query: 2627 EILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXXMV 2806
             +LG SKG     KETWWWN+EVQ V++ K+  FK WQQ+ S E               V
Sbjct: 619  RVLGLSKGGRVIDKETWWWNDEVQEVIREKKTAFKKWQQSNSPEDRLEYIAAKRASKRAV 678

Query: 2807 SEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEIKE 2986
            + A+S     LY  L T EG+K+IYK+A+ RD+ T+D+     +K     +L     +KE
Sbjct: 679  ARARSDRLSPLYDTLETAEGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKE 738

Query: 2987 RWKSYFEKLLNEENGDRQNMEEPREIRPNT-FFRRIRTSEVRAALKKMKPGRALGPDGIP 3163
            RW+ YF++LLN ++        P EI PN      I   E R  L++MK  +A+GPD IP
Sbjct: 739  RWRCYFKELLNTQH----PCSLPTEIPPNLGLIAPITPDETRNCLRRMKNRKAVGPDDIP 794

Query: 3164 IEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKLIS 3343
            IE WK LG  GV  +T +FN+++ T  MP +WR S + PIYK +G +Q C +YRG+K++S
Sbjct: 795  IEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDCGSYRGVKIMS 854

Query: 3344 HTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXXDLHMIFID 3523
            HTMKL+ER+I+ RLR E  VSE Q+GF PG  T +AI                LH+ F+D
Sbjct: 855  HTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKRRALHVAFLD 914

Query: 3524 LEKAYDRVPRDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQG 3703
            L+KA+D VPR  IWW L  KG+   YID+I+DMY  ++++VRT  G+++ FPI+VGLHQG
Sbjct: 915  LQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQG 974

Query: 3704 SALSPYLFALIMDELTRQIQDEVPQCMLFADDIVLVDETK 3823
            SALSP+LF +++D ++  IQD+ P  M++ADDI L+DE++
Sbjct: 975  SALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESR 1014


>gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 985

 Score =  627 bits (1618), Expect = e-177
 Identities = 326/760 (42%), Positives = 465/760 (61%), Gaps = 4/760 (0%)
 Frame = +2

Query: 1556 ARAFPVSDALRLPPGVSKNGQGASHRRPGAMINEQGFLHQSGRVRVKKQVQDSSLRLATW 1735
            ARA P++DA    P  + +GQG               L    R R+K  V    LR ATW
Sbjct: 11   ARASPINDAQAHRPTPAISGQG---------------LPCQVRARLKTLVPQRKLRFATW 55

Query: 1736 NIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHRNGVGI 1915
            NIG+L+G+  EL D ++RR+V  A LQET+W G K+R I   G+++ YTG    + GV +
Sbjct: 56   NIGSLTGRCRELADVLMRRRVQCAFLQETRWKGNKSRNI-GQGYRLIYTGSPSGKAGVAV 114

Query: 1916 VVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQMDELI 2095
            V+ + L+N ++ V RR DRL+ V++++   I N+ISAY PQ G     K  FWEQ +E++
Sbjct: 115  VLSEELRNGLLEVDRRCDRLMRVRVLIEGVITNLISAYTPQAGCSGSEKESFWEQFEEVL 174

Query: 2096 QEIPASEKIYIGGDFNGHVGEDHLGYEMVHGGYGIGDRNDLGESILDFAMAYGLVLVNTY 2275
            + IPA+E I +GGD NGHVG     ++ VHGG+G G RN  GE+IL   +A  L +VNT+
Sbjct: 175  RAIPAAEVIIVGGDLNGHVGRAAETFDRVHGGFGYGRRNAEGENILRTCIASDLAVVNTF 234

Query: 2276 FKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDIKIKKQ 2455
            F+K  +HLIT+KSG++ +QID+ +TR+       +CKVIPGESLT QHR++VMD  +  +
Sbjct: 235  FQKTPQHLITYKSGSHSTQIDYLLTRRCHISKVTNCKVIPGESLTAQHRLLVMDYVVTPK 294

Query: 2456 YRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNT---MWNKMAACIRGVSK 2626
             +   EK  PR +WW L G     F+ ++  +   N+   T T   +W++  + I    K
Sbjct: 295  KKV-AEKRKPRIRWWLLNGTMQTSFRAEVESQ---NLSTNTETAQEVWDRAQSAIITAGK 350

Query: 2627 EILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXXMV 2806
             +LG SKG     KETWWWN+EVQ V++ K+  FK WQQ+ S E               V
Sbjct: 351  RVLGLSKGGRVIDKETWWWNDEVQEVIREKKTAFKKWQQSNSPEDRLEYIAAKRASKRAV 410

Query: 2807 SEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEIKE 2986
            + A+S     LY  L T EG+K+IYK+A+ RD+ T+D+     +K     +L     +KE
Sbjct: 411  ARARSDRLSPLYDTLETAEGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKE 470

Query: 2987 RWKSYFEKLLNEENGDRQNMEEPREIRPNT-FFRRIRTSEVRAALKKMKPGRALGPDGIP 3163
            RW+ YF++LLN ++        P EI PN      I   E R  L++MK  +A+GPD IP
Sbjct: 471  RWRCYFKELLNTQH----PCSLPTEIPPNLGLIAPITPDETRNCLRRMKNRKAVGPDDIP 526

Query: 3164 IEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKLIS 3343
            IE WK LG  GV  +T +FN+++ T  MP +WR S + PIYK +G +Q C +YRG+K++S
Sbjct: 527  IEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDCGSYRGVKIMS 586

Query: 3344 HTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXXDLHMIFID 3523
            HTMKL+ER+I+ RLR E  VSE Q+GF PG  T +AI                LH+ F+D
Sbjct: 587  HTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKRRALHVAFLD 646

Query: 3524 LEKAYDRVPRDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQG 3703
            L+KA+D VPR  IWW L  KG+   YID+I+DMY  ++++VRT  G+++ FPI+VGLHQG
Sbjct: 647  LQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQG 706

Query: 3704 SALSPYLFALIMDELTRQIQDEVPQCMLFADDIVLVDETK 3823
            SALSP+LF +++D ++  IQD+ P  M++ADDI L+DE++
Sbjct: 707  SALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESR 746


>emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-directed DNA polymerase
            (reverse transcriptase) domain containing protein
            [Haemonchus contortus]
          Length = 816

 Score =  605 bits (1560), Expect = e-170
 Identities = 310/721 (42%), Positives = 439/721 (60%), Gaps = 2/721 (0%)
 Frame = +2

Query: 1667 LHQSGRVRVKKQVQDSSLRLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAR 1846
            L +S R R KK V     R+ T N+G+L+GK  E+ D M RR + + CLQET+W G KAR
Sbjct: 4    LPRSERPRSKKLV-----RIGTLNVGSLTGKSREVADLMKRRNIQVLCLQETRWKGAKAR 58

Query: 1847 EIENTGFKIFYTGKHRHRNGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISA 2026
            EI   G K++Y G    RNGV I V ++LK+ +  V R   R++ V++   E    IIS 
Sbjct: 59   EI-GEGVKLYYNGDDTKRNGVAIAVAESLKDSVSVVSRISSRIMAVRIETKEGYWTIISV 117

Query: 2027 YAPQVGLDEFTKVQFWEQMDELIQEIPASEKIYIGGDFNGHVGEDHLGYEMVHGGYGIGD 2206
            YAPQ G   + K +F+  +DE I+ +P  + + I GD NGHVG +  G E VHGG GIG 
Sbjct: 118  YAPQAGCPAYEKDEFYLNLDEAIRSVPEGDYLTIAGDMNGHVGSERRGLERVHGGRGIGV 177

Query: 2207 RNDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCK 2386
            RN+ GE +LD AMA+ L + +T+F KR    +T+ SG N+++ID  + R+    T KD K
Sbjct: 178  RNEEGERVLDLAMAHDLAVCSTFFAKRRSQKVTYSSGGNETEIDHVLVRRSSLKTVKDIK 237

Query: 2387 VIPGESLTTQHRIMVMDIKIK--KQYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPW 2560
            V+PGE L TQHR ++ DI I+  K+ R R E+   R +WW L   + E  K KIL+    
Sbjct: 238  VLPGEELATQHRPLLADIAIELPKKSRTRTER---RIRWWKLHRLERENLKEKILEVGLP 294

Query: 2561 NIEDETNTMWNKMAACIRGVSKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQ 2740
            + E      W+     I G +KE LGE++G     KE W+WN+EVQ VV+ K+  +K WQ
Sbjct: 295  DPEGPIQQTWSNAVKVILGCAKETLGETRGGLRGNKEAWFWNDEVQRVVREKKLAYKRWQ 354

Query: 2741 QTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDL 2920
            +TR+ E               V++AK+   D LY KL + EGEK ++++AK R R T+D+
Sbjct: 355  KTRALEDLAAYKTSKRLAKAAVAKAKNIEMDALYEKLDSREGEKFVFRLAKARHRATQDI 414

Query: 2921 HSIKCIKSEDSRVLVKDEEIKERWKSYFEKLLNEENGDRQNMEEPREIRPNTFFRRIRTS 3100
              +K +++ +  +L K  E++ RWK YF++LLNEE     +        P   +      
Sbjct: 415  RVVKAVRNSEGAILRKPGEVRRRWKEYFDRLLNEEFARENSSHSEATAGPIKLWTE---D 471

Query: 3101 EVRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVP 3280
            EVR A+ KMK G+A GPDG+PIE WK LGE G+ W+T+  N +    R+PD WR+S +VP
Sbjct: 472  EVRKAIGKMKVGKATGPDGVPIEAWKALGEHGIKWLTRFLNTVTAEGRIPDAWRRSTIVP 531

Query: 3281 IYKNKGDIQCCSNYRGIKLISHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAIXX 3460
            I+K KGD   CSNYRGI+L +HTMKL+ER+++ RLR    +SE QFGFMP RSTT+AI  
Sbjct: 532  IFKQKGDAMDCSNYRGIRLTAHTMKLYERLVDSRLRELVPISEGQFGFMPERSTTDAIFI 591

Query: 3461 XXXXXXXXXXXXXDLHMIFIDLEKAYDRVPRDLIWWVLNKKGVTSRYIDVIKDMYDGAMT 3640
                           ++ F+DLEKA+DR+PR+++W  L K+ V    I ++KDMYDG+ T
Sbjct: 592  ARQIMEKYREKRRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTT 651

Query: 3641 IVRTTAGESREFPITVGLHQGSALSPYLFALIMDELTRQIQDEVPQCMLFADDIVLVDET 3820
             +RT  G++    +TVG+HQGSALSP+LF L MD +T ++ D   + +L+ADDI L+ E+
Sbjct: 652  TIRTAHGQTGAIDVTVGVHQGSALSPFLFLLTMDVITEELMDGPLKTILYADDIALIAES 711

Query: 3821 K 3823
            K
Sbjct: 712  K 712


>gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 996

 Score =  587 bits (1514), Expect = e-164
 Identities = 306/736 (41%), Positives = 434/736 (58%), Gaps = 2/736 (0%)
 Frame = +2

Query: 1622 ASHRRPGAMINEQGFLHQSGRVRVKKQVQDSSL--RLATWNIGTLSGKGMELVDTMLRRK 1795
            A   RP +  N  G L   GR R+ K V + SL  R AT N+GTL+GK  EL     RRK
Sbjct: 20   AQKYRPTSANNILG-LPSHGRARLMKLVPNCSLKFRFATLNVGTLTGKTKELASLFKRRK 78

Query: 1796 VNIACLQETKWVGEKAREIENTGFKIFYTGKHRHRNGVGIVVDKNLKNDIVTVIRRGDRL 1975
            V+ ACLQET+W G KA  I   G+K+ Y G    RNGV I V      + + V R  DRL
Sbjct: 79   VDFACLQETRWTGAKALNI-GEGYKLMYVGARHGRNGVAIAVKAEHLENFLEVNRINDRL 137

Query: 1976 ILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQMDELIQEIPASEKIYIGGDFNGHVG 2155
            + +K+++   +IN+ISAYAPQ G     K  FW  +++ +++IP+ E + +GGD NGH+G
Sbjct: 138  MSLKVLVEGEVINVISAYAPQAGCSRAEKDSFWTTLEDHLRQIPSKETMLLGGDLNGHIG 197

Query: 2156 EDHLGYEMVHGGYGIGDRNDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSGTNKSQI 2335
             ++  ++ VHGG+G G  N+ GE IL  A A+ L + NT+F K+ EH IT+KSG   SQI
Sbjct: 198  TENKAFKRVHGGHGFGTINEEGEVILSTAAAFDLAITNTFFAKKPEHTITYKSGQTTSQI 257

Query: 2336 DFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDIKIKKQYRARKEKINPRTKWWNLKGE 2515
            D+ +  +       +CKVIPGE   TQHRI+VMD+  KK  + +       TKWWNLKG+
Sbjct: 258  DYILVNRAYIGRVTNCKVIPGECAVTQHRIVVMDMLFKKTSKTKTSHTPEITKWWNLKGD 317

Query: 2516 KLELFKNKILKEAPWNIEDETNTMWNKMAACIRGVSKEILGESKGRGPQFKETWWWNEEV 2695
            K+  F N  L     + E + + +W+ ++  I       LG +KG     KETWWW E V
Sbjct: 318  KIPEFCNH-LSNLKVDTELDIDNIWDHLSKSIVKAGNITLGRTKGGRINNKETWWWTEAV 376

Query: 2696 QNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKI 2875
            QN ++ K++ FKTWQ T++ E  E           +V+  ++ A   +Y +L T EG+K 
Sbjct: 377  QNAIQKKKDAFKTWQSTQTSEDQERYKRIKKETKKIVAVERAVALKTMYEQLETKEGQKC 436

Query: 2876 IYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEIKERWKSYFEKLLNEENGDRQNMEEP 3055
            I+K+AK R   T+D    + +K  +  +L  D ++   W  Y+E+LLN      Q  +  
Sbjct: 437  IFKLAKQRCWSTRDPTRCRAVKDPNGELLYGDSDVLSAWHQYYEQLLNPTQAAIQLTKVV 496

Query: 3056 REIRPNTFFRRIRTSEVRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIM 3235
            R I        IR +E + AL+KM   +A GPDGIP+E WKCL E G+  +TK+FN ++ 
Sbjct: 497  RNI---GLIPPIRPNEFKMALEKMPNKKATGPDGIPVEAWKCLREHGIETLTKLFNCVLR 553

Query: 3236 TKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKLISHTMKLWERVIEHRLRMETNVSENQ 3415
            + +MP  WR S +VPIYK KG    CSNYRGIKL+SHTMKL+ERVI+ RLR E ++S+N 
Sbjct: 554  SSKMPAAWRLSTIVPIYKGKGSKYECSNYRGIKLLSHTMKLYERVIDSRLRSECSLSKNH 613

Query: 3416 FGFMPGRSTTEAIXXXXXXXXXXXXXXXDLHMIFIDLEKAYDRVPRDLIWWVLNKKGVTS 3595
            +GF+ G STT+ +                L++ F+D+EKA+DRVPRD IWW L KK V  
Sbjct: 614  YGFVQGLSTTDPMFALNTIAEEYREKLRPLYVAFLDMEKAFDRVPRDTIWWSLRKKNVPE 673

Query: 3596 RYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFALIMDELTRQIQDEVP 3775
             Y++VI DMY  A ++VRT  G+++   +  GLHQGS LSP+LF +++D LT   Q    
Sbjct: 674  HYVNVIIDMYRDARSMVRTVVGQTKPIAVAEGLHQGSVLSPFLFGMVIDSLTEVAQSSAS 733

Query: 3776 QCMLFADDIVLVDETK 3823
               ++ADD+ +  E++
Sbjct: 734  WTFIYADDVAICTESR 749


>gb|EHJ71507.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 1470

 Score =  538 bits (1385), Expect = e-150
 Identities = 294/719 (40%), Positives = 416/719 (57%), Gaps = 4/719 (0%)
 Frame = +2

Query: 1445 LPVPSPDKGGGLR*VADSQRKTLSDFYDMNPIITYTDARAFPVSDALRLPPGVSKNGQGA 1624
            +P+ S  +G G R V     KT      +  +     ARA P++DA    P  + +GQG 
Sbjct: 765  IPLSSVHEGDGSRSV-----KTTPATLMVAKVYGLGTARASPINDAQAHRPTPAISGQG- 818

Query: 1625 SHRRPGAMINEQGFLHQSGRVRVKKQVQDSSLRLATWNIGTLSGKGMELVDTMLRRKVNI 1804
                          L    R R+K  V    LR ATWNIG+L+G+  EL D ++RR+V  
Sbjct: 819  --------------LPCQVRARLKTLVPQRKLRFATWNIGSLTGRCRELADVLMRRRVQC 864

Query: 1805 ACLQETKWVGEKAREIENTGFKIFYTGKHRHRNGVGIVVDKNLKNDIVTVIRRGDRLILV 1984
            A LQET+W G K+R I   G+++ YTG    + GV +V+ + L+N ++ V RR DRL+ V
Sbjct: 865  AFLQETRWKGNKSRNI-GQGYRLIYTGSPSGKAGVAVVLSEELRNGLLEVDRRCDRLMRV 923

Query: 1985 KLVLGENIINIISAYAPQVGLDEFTKVQFWEQMDELIQEIPASEKIYIGGDFNGHVGEDH 2164
            ++++   I N+ISAY PQ G     K  FWEQ +E+++ IPA+E I +GGD NGHVG   
Sbjct: 924  RVLIEGVITNLISAYTPQAGCSGSEKESFWEQFEEVLRAIPAAEVIIVGGDLNGHVGRAA 983

Query: 2165 LGYEMVHGGYGIGDRNDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSGTNKSQIDFF 2344
              ++ VHGG+G G RN  GE+IL   +A  L +VNT+F+K  +HLIT+KSG++ +QID+ 
Sbjct: 984  ETFDRVHGGFGYGRRNAEGENILRTCIASDLAVVNTFFQKTPQHLITYKSGSHSTQIDYL 1043

Query: 2345 ITRKGDRLTCKDCKVIPGESLTTQHRIMVMDIKIKKQYRARKEKINPRTKWWNLKGEKLE 2524
            +TR+       +CKVIPGESLT QHR++VMD  +  + +   EK  PR +WW L G    
Sbjct: 1044 LTRRCHIGKVTNCKVIPGESLTAQHRLLVMDYVVTPKKKV-AEKRKPRIRWWLLNGTMQT 1102

Query: 2525 LFKNKILKEAPWNIEDETNT---MWNKMAACIRGVSKEILGESKGRGPQFKETWWWNEEV 2695
             F+ ++  +   N+   T T   +W++  + I    K +LG SKG     KETWWWN+EV
Sbjct: 1103 SFRAEVESQ---NLSTNTETAQEVWDRAQSAIITAGKRVLGLSKGGRVIDKETWWWNDEV 1159

Query: 2696 QNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKI 2875
            Q V++ K+  FK WQQ+ S E               V+ A+S     LY  L T EG+K+
Sbjct: 1160 QEVIREKKTAFKKWQQSNSPEDRLEYIAAKRASKRAVARARSDRLSPLYDTLETAEGQKL 1219

Query: 2876 IYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEIKERWKSYFEKLLNEENGDRQNMEEP 3055
            IYK+A+ RD+ T+D+     +K     +L     +KERW+ YF++LLN ++        P
Sbjct: 1220 IYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFKELLNTQH----PCSLP 1275

Query: 3056 REIRPNT-FFRRIRTSEVRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKII 3232
             EI PN      I   E R  L++MK  +A+GPD IPIE WK LG  GV  +T +FN+++
Sbjct: 1276 TEIPPNLGLIAPITPDETRNCLRRMKNRKAVGPDDIPIEAWKSLGSLGVLILTDLFNRVL 1335

Query: 3233 MTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKLISHTMKLWERVIEHRLRMETNVSEN 3412
             T  MP +WR S + PIYK +G +Q C +YRG+K++SHTMKL+ER+I+ RLR E  VSE 
Sbjct: 1336 NTGTMPHQWRYSYITPIYKGRGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSEC 1395

Query: 3413 QFGFMPGRSTTEAIXXXXXXXXXXXXXXXDLHMIFIDLEKAYDRVPRDLIWWVLNKKGV 3589
            Q+GF PG  T +AI                LH+ F+DL+KA+D VPR  IWW L  KG+
Sbjct: 1396 QYGFQPGSGTLDAIFAIRTLMEAYREKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGI 1454


>ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria chalumnae]
          Length = 1500

 Score =  537 bits (1384), Expect = e-149
 Identities = 282/639 (44%), Positives = 395/639 (61%), Gaps = 8/639 (1%)
 Frame = +2

Query: 1931 LKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQMDELIQEIPA 2110
            +K  +V V R  DR++ V+L LG  +++++SA+APQ+G  +  K +F E +D  +Q I  
Sbjct: 1    MKTKVVEVTRVSDRIMTVRLALGFGVVSVVSAFAPQMGCGDKEKEEFQEGLDRELQRIAR 60

Query: 2111 SEKIYIGGDFNGHVGEDHLGYEMVHGGYGIGDRNDLGESILDFAMAYGLVLVNTYFKKRF 2290
            ++ I +G D NG VG D  GYE  HGG G G+RN  GE++L  A A+ L +VNTYFKK+ 
Sbjct: 61   NDTIIVGVDLNGRVGRDRCGYEGNHGGQGYGERNTEGENVLRMAQAHNLAVVNTYFKKQE 120

Query: 2291 EHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDIKIK--KQYRA 2464
             +L+T++SG  +SQID+ + ++      K+CKVI GE LT QHR++VMD K +  K+ +A
Sbjct: 121  RYLVTYRSGNTQSQIDYILVKRQLLKRVKNCKVILGECLTGQHRLLVMDYKTECAKKNKA 180

Query: 2465 RKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNTMWNKMAACIRGVSKEILGES 2644
            + E +  + KWW LK  K E F  ++     W  E+     W      I+          
Sbjct: 181  KLE-MERKIKWWCLKDRK-EKFTEQVADN--WRREN-----WEAKEEDIK---------- 221

Query: 2645 KGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXXMVSEAKSK 2824
                   +   WWNE+VQ V K+K+  FK WQ+TR KE  +           +V++AK  
Sbjct: 222  -------ENMRWWNEDVQEVTKDKKIKFKRWQKTRQKEDLDEYVIVKRQTKRVVAKAKVM 274

Query: 2825 AYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEIKERWKSYF 3004
            AY +LY KL + EGEK++Y+IA+ R+RK +D   +K IK  + +V++ + ++KERW+ YF
Sbjct: 275  AYVELYQKLDSREGEKMVYRIARARERKKRDFDQVKVIKDSEGQVILDENKVKERWREYF 334

Query: 3005 EKLLNEENGDRQNMEEPREIRP------NTFFRRIRTSEVRAALKKMKPGRALGPDGIPI 3166
            EKLLNEEN        PRE  P      +T    I   EV  A+KKMK  +A GPD +PI
Sbjct: 335  EKLLNEEN--------PREELPEGLPENHTAVEGITKEEVIQAMKKMKNRKATGPDEVPI 386

Query: 3167 EVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKLISH 3346
            E +K + E G+  +T+++  I    +MP EWR+S LVP++K KGD+Q C+NYRGI L+SH
Sbjct: 387  ETFKEMKEMGLVVLTRLYRAIWEEGKMPTEWRESTLVPVFKRKGDVQDCNNYRGIALMSH 446

Query: 3347 TMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXXDLHMIFIDL 3526
             MKLWER+IE RLR    +SENQFGF  GRST +AI               DLHM+F+DL
Sbjct: 447  AMKLWERIIEKRLRKLVQISENQFGFCQGRSTIDAIFALKILMEKYKEKRKDLHMVFVDL 506

Query: 3527 EKAYDRVPRDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQGS 3706
            EKAYDRVPR LIWW + K+G+   YI ++KDMY G+   VR+  G +  FP+ VG+ QGS
Sbjct: 507  EKAYDRVPRGLIWWCMRKRGIPEVYIRLVKDMYQGSKIWVRSACGTTTSFPVKVGVRQGS 566

Query: 3707 ALSPYLFALIMDELTRQIQDEVPQCMLFADDIVLVDETK 3823
            ALSP+LF L++D LT+ IQ E P CMLFADDI+L  E++
Sbjct: 567  ALSPFLFILVLDTLTKDIQKEPPWCMLFADDIMLCAESR 605


>emb|CDJ96637.1| Endonuclease exonuclease phosphatase and RNA-directed DNA polymerase
            (reverse transcriptase) domain containing protein
            [Haemonchus contortus]
          Length = 854

 Score =  493 bits (1269), Expect = e-136
 Identities = 270/720 (37%), Positives = 413/720 (57%), Gaps = 2/720 (0%)
 Frame = +2

Query: 1670 HQSGRVRVKKQVQDSSLRLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKARE 1849
            H+     V+K      +R+AT N+GTL+G+  +L + + RR+++   +Q T+W   K+R+
Sbjct: 10   HRGATKLVRKPRNVWKIRVATLNVGTLTGRLYDLAEALERRRIDFCAVQGTRWSCCKSRD 69

Query: 1850 IENTGFKIFYTGKHRHRNGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAY 2029
            I   GFK    G  +  NGVGI+V +  ++ IV+V R  DRL+ + +V+     ++ SAY
Sbjct: 70   I-GLGFKAVLCGGPKTTNGVGIIVSERFRDSIVSVERFDDRLMKIVVVIERQKYHLFSAY 128

Query: 2030 APQVGLDEFTKVQFWEQMDELIQEIPASEKIYIGGDFNGHVGEDHLGYEMVHGGYGIGDR 2209
            APQ G  E TK +FW  +DE   E+P  E I + GD NGHVG    GY   HGG+G G R
Sbjct: 129  APQTGCSEQTKDKFWNLLDEKTAEVPLQEAIVVAGDLNGHVGATKDGYSC-HGGFGYGSR 187

Query: 2210 NDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKV 2389
            N  GE IL++A ++ L +VNT F+KR  HLITF SG N++QIDF + R  D+    D K 
Sbjct: 188  NTDGERILEYADSHNLAIVNTRFRKRDSHLITFYSGENRTQIDFVLVRHRDQGLVTDAKT 247

Query: 2390 IPGESLTTQHRIMVMDIKIKKQYRARKEKINP-RTKWWNLKGEKLELFKNKILKEAPWNI 2566
            +P E++ TQHR ++  +KI        E+  P R KWW LK EK E   + IL  A   +
Sbjct: 248  VPYETVATQHRPLICTLKIAPPKPKLAERSGPARIKWWRLK-EKEETVVSSILLPAVTTV 306

Query: 2567 EDETNTMWNKMAACIRGVSKEILGESK-GRGPQFKETWWWNEEVQNVVKNKRECFKTWQQ 2743
             DET   W   A  I  V++  LG +K GR    K+TW W + V++ V  K++ +  +  
Sbjct: 307  -DET---WKGAAEAITRVARSKLGVTKPGRRKLDKQTWLWTDHVRDKVHEKKKQYHAFLI 362

Query: 2744 TRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLH 2923
             ++ ++++            V+  K+  + +L  KL + EGE+ IY++AK R+R+T+D+ 
Sbjct: 363  EKTDDNWQRYQIAKKEAKKAVASEKAAHFAELNKKLESREGERYIYRLAKTRNRQTEDIE 422

Query: 2924 SIKCIKSEDSRVLVKDEEIKERWKSYFEKLLNEENGDRQNMEEPREIRPNTFFRRIRTSE 3103
                I  E+ R+L    ++ ERW+ YF  +   E         P    P    ++I  SE
Sbjct: 423  KFFGINDENGRLLTDRRQVLERWREYFANISTVEFAHPAIPCAPPVHGP---VQKITVSE 479

Query: 3104 VRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPI 3283
               ALKKMK G+A GPD +  ++WK  G     W+T+ FN+ +  K++P+ W++S  +PI
Sbjct: 480  TITALKKMKSGKATGPDDVAADLWKSKGWNPAGWLTEFFNQAVAEKKVPESWQQSTTIPI 539

Query: 3284 YKNKGDIQCCSNYRGIKLISHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAIXXX 3463
            +K KG +  C+ YR I+L+SH+MK +ER+++ R+R    +  NQ  F+ G ST +AI   
Sbjct: 540  WKKKGSLGDCACYRPIRLLSHSMKFFERIVDSRIRDIVELITNQCVFVAGCSTIDAIHAT 599

Query: 3464 XXXXXXXXXXXXDLHMIFIDLEKAYDRVPRDLIWWVLNKKGVTSRYIDVIKDMYDGAMTI 3643
                         +H+ F+DLEKA+ RVPRD+IW+ L + GV   +I+ ++ +Y    + 
Sbjct: 600  SLLLEKHHEKRRPIHLAFLDLEKAFGRVPRDVIWYALRQHGVPEEHIEWVRILYTSPKSR 659

Query: 3644 VRTTAGESREFPITVGLHQGSALSPYLFALIMDELTRQIQDEVPQCMLFADDIVLVDETK 3823
            V+  AG   EFPI+VG+HQGSALSP LF ++MD +T+ +Q   P  +L+ADD++L  E K
Sbjct: 660  VQMAAGTLTEFPISVGVHQGSALSPLLFVVVMDTITKDLQKPAPWTLLYADDVMLASEDK 719


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
            domestica]
          Length = 622

 Score =  489 bits (1259), Expect = e-135
 Identities = 244/415 (58%), Positives = 297/415 (71%), Gaps = 6/415 (1%)
 Frame = +2

Query: 2597 MAACIRGVSKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXX 2776
            MA+CIR V+KE+LGESKG     KE+WWWNEEV    K K+EC K   + R+ E+ E   
Sbjct: 1    MASCIRKVAKEVLGESKGFATHQKESWWWNEEV----KAKKECCKALYKDRTDENGERYR 56

Query: 2777 XXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSR 2956
                     V EAK  AYDD+Y +L T EGE  IYK+A+ R++KT+DL+ ++CIK ED +
Sbjct: 57   KAKQEAKKAVREAKLAAYDDMYKRLDTKEGELDIYKLARAREKKTRDLNQVRCIKDEDGK 116

Query: 2957 VLVKDEEIKERWKSYFEKLLNEEN------GDRQNMEEPREIRPNTFFRRIRTSEVRAAL 3118
            VL  +  +K++W+ YF  L NE +      G+  N EE R     +F+RRIR  EV  AL
Sbjct: 117  VLATENAVKDKWRGYFHNLFNEGHERSASLGELSNSEECRNY---SFYRRIRKEEVVVAL 173

Query: 3119 KKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKG 3298
            KKMK  +A+GPD IPIEVWK LGE G++W+  +FN+I+ TK+MP+EWR S LVPIYKNKG
Sbjct: 174  KKMKHRKAVGPDDIPIEVWKVLGETGITWLIDLFNRILKTKKMPNEWRTSPLVPIYKNKG 233

Query: 3299 DIQCCSNYRGIKLISHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXX 3478
            D+Q C NYRGIKL+SHTMKLWERVIEHRLR ET VS+NQFGFMPGRST EAI        
Sbjct: 234  DVQNCMNYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLME 293

Query: 3479 XXXXXXXDLHMIFIDLEKAYDRVPRDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTA 3658
                   DLHM+FIDLEKAYDRV RD+IW +L KKGV   YI  IKDMY+GA T VRT  
Sbjct: 294  RYRDGKKDLHMVFIDLEKAYDRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYE 353

Query: 3659 GESREFPITVGLHQGSALSPYLFALIMDELTRQIQDEVPQCMLFADDIVLVDETK 3823
            G++  FPITVGLHQGS+LSPYLFAL+MDELT  IQD++P CMLFA DIVL+DET+
Sbjct: 354  GQTESFPITVGLHQGSSLSPYLFALVMDELTGHIQDDIPWCMLFAYDIVLIDETQ 408


>emb|CDJ97473.1| Endonuclease exonuclease phosphatase and RNA-directed DNA polymerase
            (reverse transcriptase) domain containing protein
            [Haemonchus contortus]
          Length = 778

 Score =  453 bits (1165), Expect = e-124
 Identities = 261/720 (36%), Positives = 394/720 (54%), Gaps = 2/720 (0%)
 Frame = +2

Query: 1670 HQSGRVRVKKQVQDSSLRLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKARE 1849
            H+     V+K       R+AT N+GTL+G+  EL + + RR+++   +QET+W   K+R+
Sbjct: 5    HRGATKLVRKPRNVWKTRVATLNVGTLTGRSYELAEALERRRIDFCAVQETRWSCCKSRD 64

Query: 1850 IENTGFKIFYTGKHRHRNGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAY 2029
            I   GFK    G  +  NGVGI+V +  ++ IV+V R  DRL+ + +V+ E   ++ SAY
Sbjct: 65   I-GLGFKAVLCGGPKTTNGVGIIVSERFRDSIVSVERFDDRLMKIVVVI-EQKYHLFSAY 122

Query: 2030 APQVGLDEFTKVQFWEQMDELIQEIPASEKIYIGGDFNGHVGEDHLGYEMVHGGYGIGDR 2209
            APQ G  E TK  FW  +DE   E+P  E I + GD NGHVG    GY   HGG+G G R
Sbjct: 123  APQTGCSEQTKDTFWNLLDEKTAEVPLQEAIVVAGDLNGHVGATKDGYSC-HGGFGYGSR 181

Query: 2210 NDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKV 2389
            N  GE IL++A ++ L +VNT F+KR  HLITF SG N++QIDF + R  D+    D K 
Sbjct: 182  NTDGERILEYADSHNLTIVNTRFRKRDSHLITFYSGENRTQIDFVLVRHRDQGLVTDAKT 241

Query: 2390 IPGESLTTQHRIMVMDIKIKKQYRARKEKINP-RTKWWNLKGEKLELFKNKILKEAPWNI 2566
            +P E++ TQHR ++  +KI        E+  P R KWW LK EK E   + IL  A   +
Sbjct: 242  VPYETVATQHRPLICTLKIAPPKPKIAERCGPARIKWWRLK-EKEEAVVSSILLPAVTTV 300

Query: 2567 EDETNTMWNKMAACIRGVSKEILGESK-GRGPQFKETWWWNEEVQNVVKNKRECFKTWQQ 2743
             DET   W      I  V++  LG +K GR    K+TW W + V++ V+ K++ +  +  
Sbjct: 301  -DET---WKGAVEAITRVARSKLGVTKPGRRKLDKQTWLWTDHVRDKVREKKKQYHAFVI 356

Query: 2744 TRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLH 2923
             ++ ++++            V+  K+  Y DL  KL + +GE+ +Y++AK R+R+T+D+ 
Sbjct: 357  EKTADNWQRYQIAKKEAKKAVASEKAAQYADLNKKLESRDGERYVYRLAKTRNRQTEDIE 416

Query: 2924 SIKCIKSEDSRVLVKDEEIKERWKSYFEKLLNEENGDRQNMEEPREIRPNTFFRRIRTSE 3103
                I  E+ R+L +  ++ +RW+ YF  +   E         P    P    ++I  +E
Sbjct: 417  KFFGINDENGRLLTERRQVLKRWREYFANISTVEFAHPAIPCAPAVHGP---VQKITVNE 473

Query: 3104 VRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPI 3283
               ALKKMK                                        + W++S  +PI
Sbjct: 474  TITALKKMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESWQQSSTIPI 533

Query: 3284 YKNKGDIQCCSNYRGIKLISHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAIXXX 3463
            +K KG    C+ YR I+L+SH+MK++ER+++ R+R    ++ NQ GF+ G ST +AI   
Sbjct: 534  WKKKGSPGDCTCYRPIRLLSHSMKIFERIVDSRIRDIVELTTNQCGFVAGCSTIDAIHAA 593

Query: 3464 XXXXXXXXXXXXDLHMIFIDLEKAYDRVPRDLIWWVLNKKGVTSRYIDVIKDMYDGAMTI 3643
                         LH+ F+DLEKA+DRVPRD+IW+ L + GV    I+ ++ +Y    + 
Sbjct: 594  RLLLEKHREKRRPLHLAFLDLEKAFDRVPRDVIWYALRQHGVPEELIEWVRILYTSPKSR 653

Query: 3644 VRTTAGESREFPITVGLHQGSALSPYLFALIMDELTRQIQDEVPQCMLFADDIVLVDETK 3823
            V+T AG S EFPI+VG+HQGSALSP LF ++MD +T+ +Q   P  +L+ADD++L  E K
Sbjct: 654  VQTAAGISTEFPISVGVHQGSALSPLLFVVVMDAITKDLQKPAPWTLLYADDVMLASEDK 713


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 517

 Score =  433 bits (1114), Expect = e-118
 Identities = 215/413 (52%), Positives = 280/413 (67%)
 Frame = +2

Query: 2585 MWNKMAACIRGVSKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESF 2764
            MW +MA  I+ V+KE LGES+G GP+ KE+WWWN+ VQ+ V+ KR+CFK W + ++ E++
Sbjct: 1    MWERMAHEIKKVAKETLGESRGFGPRGKESWWWNDNVQSKVRIKRDCFKDWSRCKNVETW 60

Query: 2765 EXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKS 2944
            +           +VSEA+++A++ LY  LGT EGEK IYK++K R+RKT+DL  +KCIK 
Sbjct: 61   DKYKIARKEAKKVVSEARTQAFEGLYQSLGTKEGEKSIYKLSKGRERKTRDLDQVKCIKD 120

Query: 2945 EDSRVLVKDEEIKERWKSYFEKLLNEENGDRQNMEEPREIRPNTFFRRIRTSEVRAALKK 3124
            E+ RVLV+                +   G   N           ++RRI+  EVR ALK+
Sbjct: 121  EEGRVLVR----------------HRRGGPNYN-----------YYRRIQEHEVREALKR 153

Query: 3125 MKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDI 3304
            M    A+GPD IPIEVWK LG+ G  W+  +FN+II TK+M DEWR+S L+PI KNKGDI
Sbjct: 154  MGSDEAVGPDNIPIEVWKSLGDRGTVWLANLFNEIIRTKKMSDEWRRSTLIPIDKNKGDI 213

Query: 3305 QCCSNYRGIKLISHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXX 3484
            Q C+NYRGIKL+SHTMKLWERVI+ RLR ET V++NQFGFM GRST EAI          
Sbjct: 214  QNCANYRGIKLMSHTMKLWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERY 273

Query: 3485 XXXXXDLHMIFIDLEKAYDRVPRDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGE 3664
                 DLH++F DLEK YDRVPR+++W  L KK V   YI  IKDMY+ A T V+T  G 
Sbjct: 274  RTDKKDLHLVFFDLEKGYDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVKTQDGT 333

Query: 3665 SREFPITVGLHQGSALSPYLFALIMDELTRQIQDEVPQCMLFADDIVLVDETK 3823
            + +FPIT+GLHQGS L+PYLF L++D LT  IQ+  P+CMLFADD+VLV E++
Sbjct: 334  TEDFPITIGLHQGSTLTPYLFTLVLDVLTEHIQELAPRCMLFADDVVLVGESR 386


>gb|EMT31191.1| Disease resistance RPP8-like protein 3 [Aegilops tauschii]
          Length = 1358

 Score =  411 bits (1057), Expect = e-111
 Identities = 212/520 (40%), Positives = 303/520 (58%), Gaps = 81/520 (15%)
 Frame = +2

Query: 1535 PIITYTDARAF---------------PVSDALRLPPGVSKNGQG---------------- 1621
            PI+T+T   A                P+SDA    PGV +NGQG                
Sbjct: 826  PILTFTQTDAVDSSIIIIFQFSLGRNPLSDAPHRNPGVLENGQGLGRHPPSGAPYLDPDT 885

Query: 1622 --------------ASHRRPGAMINEQGFLHQSGRVR-VKKQVQDSSLRLATWNIGTLSG 1756
                          A HRRP  + NE G  H + RVR V+K  +   +RL +WN+G+L+G
Sbjct: 886  VASERGSGRHILSGALHRRPDVVENEHGSSHLTRRVRRVRKLAEPRRIRLGSWNVGSLTG 945

Query: 1757 KGMELVDTMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHRNGVGIVVDKNLK 1936
            K  ELVD  +RR V+I C+QETKW G+KA+E+E+TGFK++Y G   +RNGVGI+++K+LK
Sbjct: 946  KLRELVDAAVRRGVDILCVQETKWRGQKAKEVEDTGFKLWYMGTAANRNGVGILINKSLK 1005

Query: 1937 ND-----------------------------------IVTVIRRGDRLILVKLVLGENII 2011
                                                 +V V RRG  +ILVKLV+ + ++
Sbjct: 1006 GQKAKEVEDTGFKLWYMGTAANRNGVGILINKSLKYGVVDVKRRG--IILVKLVVEDLVL 1063

Query: 2012 NIISAYAPQVGLDEFTKVQFWEQMDELIQEIPASEKIYIGGDFNGHVGEDHLGYEMVHGG 2191
            N+ISAYAPQVG +E TK +FWE ++++++ +P  EK++IGGD NGHVG  + G+E  HG 
Sbjct: 1064 NVISAYAPQVGHNENTKREFWEGLEDMVRSVPIGEKLFIGGDLNGHVGTSNTGFEGAHGS 1123

Query: 2192 YGIGDRNDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLT 2371
            +G G RN  GE +L FA+AY +++ NT F+KR  HL+TF SG + SQIDF ++R+ DR  
Sbjct: 1124 FGYGIRNQEGEDVLSFALAYNMIVANTLFRKRESHLVTFSSGQHSSQIDFILSRREDRRA 1183

Query: 2372 CKDCKVIPGESLTTQHRIMVMDIKIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILKE 2551
            C DCKVIPGES+  QH+++V D + + + +  K     RTKWW LKGE  ++FK +++KE
Sbjct: 1184 CLDCKVIPGESVVPQHKLVVADFRFRIRVQRDKRAKVARTKWWKLKGEVAQVFKERVIKE 1243

Query: 2552 APWNIEDETNTMWNKMAACIRGVSKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFK 2731
             PW    + + +W KMA CIR V+ E  G S+GR  + K+TWWWN++VQ  +K  ++CF+
Sbjct: 1244 GPWEEGGDADNVWTKMATCIRKVASEEFGVSRGRRSEDKDTWWWNDDVQKAIKEMKDCFR 1303

Query: 2732 TWQQTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKL 2851
                 RS ++ E            V EA+S+AY+DLY +L
Sbjct: 1304 RLYLNRSADNIEKYKMAKKAAKRAVGEARSRAYEDLYQRL 1343


>emb|CDJ81301.1| unnamed protein product [Haemonchus contortus]
          Length = 499

 Score =  403 bits (1036), Expect = e-109
 Identities = 209/523 (39%), Positives = 304/523 (58%), Gaps = 3/523 (0%)
 Frame = +2

Query: 2243 MAYGLVLVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHR 2422
            MA+ L + +T+F KR    +T+ SG N+++ID  + R+    T KD KV+PGE L TQHR
Sbjct: 1    MAHDLAVCSTFFAKRRSQKVTYSSGGNETEIDHVLIRRSSLKTVKDIKVLPGEELATQHR 60

Query: 2423 IMVMDIKIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNTMWNKMA 2602
            +          +R  +E +                 K +IL     + E     +W+   
Sbjct: 61   L----------HRLEREHL-----------------KKRILGVGLLDPEGPIQQIWSNAV 93

Query: 2603 ACIRGVSKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXX 2782
              I G +KE LGE++G     KE W+WN+EVQ VV+ K+  ++ WQ+TR+ E        
Sbjct: 94   KVILGCAKETLGETRGGLRGDKEAWFWNDEVQRVVREKKLAYERWQKTRALEDLAAYKTS 153

Query: 2783 XXXXXXMVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVL 2962
                   V++AK+   D LY KL + EGEK ++++AK R R T+D+  +K +++ +  +L
Sbjct: 154  KRLAKAAVAKAKNMEMDALYEKLDSREGEKFVFRLAKARHRATQDIGVVKSVRNSEGAIL 213

Query: 2963 VKDEEIKERWKSYFEKLLNEENGDRQNMEEPREIRPNTFFRR---IRTSEVRAALKKMKP 3133
             K  E++ RWK YF+K LNEE   R+N     E       +    +   EVR A+ KMK 
Sbjct: 214  RKPGEVRRRWKEYFDKFLNEEFA-RENSSHLEETAGPIKLKMKCDVTEDEVRIAIGKMKV 272

Query: 3134 GRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCC 3313
            G+A GP G+PIE WK LGE G+ W+TK  N +    R+PD WR+S +VPI+K KGD   C
Sbjct: 273  GKATGPGGVPIEAWKALGEHGIKWLTKFLNTVTAEGRIPDAWRRSTIVPIFKRKGDPMDC 332

Query: 3314 SNYRGIKLISHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXX 3493
            SNYRGI+L +HTMKL+ER+++ RLR    +SE  FGFMP RSTT+AI             
Sbjct: 333  SNYRGIRLTAHTMKLYERMVDSRLRGLVPISEKLFGFMPERSTTDAIFIARQIMGKYREM 392

Query: 3494 XXDLHMIFIDLEKAYDRVPRDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESRE 3673
                ++ F+DLEKA+DR+PR+++W  L K+ V    I ++KDMYDG+ T +RT  G +  
Sbjct: 393  RRPCYLAFLDLEKAFDRLPREVLWSALRKRNVPEHLISLVKDMYDGSTTTIRTAHGHTGA 452

Query: 3674 FPITVGLHQGSALSPYLFALIMDELTRQIQDEVPQCMLFADDI 3802
              +TVG+HQGSALSP+LF + MD +T ++ D   + +L+ADDI
Sbjct: 453  IDVTVGVHQGSALSPFLFLITMDIITEKLMDGPLKTILYADDI 495


>ref|XP_003638432.1| Craniofacial development protein [Medicago truncatula]
            gi|355504367|gb|AES85570.1| Craniofacial development
            protein [Medicago truncatula]
          Length = 349

 Score =  369 bits (948), Expect = 4e-99
 Identities = 185/336 (55%), Positives = 243/336 (72%), Gaps = 11/336 (3%)
 Frame = +2

Query: 1529 MNPIITYTDARAFPVSDALRLPPGVSKNGQGASHRRPGAMINEQGFLHQSGRVRVKKQVQ 1708
            M+ I    +AR+ P S+AL     VS N QG  HRR   + N+QGF H   RVRVKK V 
Sbjct: 1    MDQIRNSVNARSLPRSNALYGSSAVS-NEQGPLHRRLDVVKNKQGFPHLHERVRVKKLVH 59

Query: 1709 DSSLRLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGK 1888
            ++ +R  TWNIGTL+GK ME+VDTM RR++N  CLQETKWVG+KA+E++++GFK++YTG+
Sbjct: 60   ENRIRFGTWNIGTLTGKSMEVVDTMTRRRINFMCLQETKWVGKKAKELDSSGFKLWYTGE 119

Query: 1889 HRHRNGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQ 2068
             R RNGVGI+VDK  K DIV V R GDR+I +K+V+ ++  ++ISA APQVGL+   KV+
Sbjct: 120  VRSRNGVGIIVDKEWKKDIVDVNRIGDRIIALKIVVEQDTFDVISANAPQVGLEAHLKVK 179

Query: 2069 FWEQMDELIQEIPASEKIYIGGDFNGHVGEDHLGYEMVHGGYGIGDRNDLGESILDFAMA 2248
            FWE+++ LIQEIP  EKI++GGD NGHVG    G+E +HGGYG+G+ N  G+SILDF+ A
Sbjct: 180  FWEELEGLIQEIPLGEKIFLGGDLNGHVGSVSRGFEGLHGGYGLGEINAEGKSILDFSSA 239

Query: 2249 YGLVLVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIM 2428
            + L + NT F+KR EHLIT+KSG + SQIDFF+ RK DR  C DCKVIPGES TTQHR+M
Sbjct: 240  FDLTIANTCFRKREEHLITYKSGVSCSQIDFFLIRKSDRKICLDCKVIPGESSTTQHRVM 299

Query: 2429 VMDIKIKKQYRARKEK--------INPRTK---WWN 2503
            VMD+++K++ + R +           PR K   WWN
Sbjct: 300  VMDVRVKRRAKRRSQNGTLGESRGFGPRGKESWWWN 335


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score =  363 bits (931), Expect = 4e-97
 Identities = 193/359 (53%), Positives = 234/359 (65%), Gaps = 6/359 (1%)
 Frame = +2

Query: 2675 WWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLG 2854
            WWWNEEVQ  VK K+EC K   +  + E+ E              EAK KA D       
Sbjct: 64   WWWNEEVQTKVKAKKECCKALYKDMTDENGERYRRAK-------QEAK-KALD------- 108

Query: 2855 TLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEIKERWKSYFEKLLNEEN-- 3028
                   IYK+AK+R++KT+DL+ ++CIK ED +VL  +  +K+R + YF  L NE +  
Sbjct: 109  -------IYKLAKVREKKTRDLNQVRCIKDEDGKVLATENAVKDRLRDYFHNLFNEGHEW 161

Query: 3029 ----GDRQNMEEPREIRPNTFFRRIRTSEVRAALKKMKPGRALGPDGIPIEVWKCLGEAG 3196
                G+  N EE R      F+RRIR  EV  ALKKMK  +A+GP+ IPI+VWK LGE G
Sbjct: 162  STSLGELSNSEEYRNY---FFYRRIRKEEVVVALKKMKHIKAVGPNDIPIKVWKVLGETG 218

Query: 3197 VSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKLISHTMKLWERVIE 3376
            ++W+T +FN+I+  K+M +EWR S LVPIYKNKGDIQ C NYRGIKL+SHTMKL  RVIE
Sbjct: 219  ITWLTDLFNRILKMKKMSNEWRNSTLVPIYKNKGDIQNCMNYRGIKLMSHTMKLLARVIE 278

Query: 3377 HRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXXDLHMIFIDLEKAYDRVPRD 3556
            HRLR +T VS+NQF FMPG ST EAI               DLHM+FIDLEK YDRVPRD
Sbjct: 279  HRLRQKTRVSDNQFKFMPGCSTMEAIYLLRKLMEKYRDGKNDLHMVFIDLEKVYDRVPRD 338

Query: 3557 LIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFAL 3733
            ++W +L KKGV   YI  IKDMYDGA T VRT  G+   FPITV LHQGS+LSPYLFAL
Sbjct: 339  ILWRILEKKGVRVAYIQAIKDMYDGAKTAVRTYEGQIESFPITVRLHQGSSLSPYLFAL 397


>emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 1526

 Score =  361 bits (927), Expect = 1e-96
 Identities = 181/434 (41%), Positives = 259/434 (59%)
 Frame = +2

Query: 2522 ELFKNKILKEAPWNIEDETNTMWNKMAACIRGVSKEILGESKGRGPQFKETWWWNEEVQN 2701
            E  K KIL+    N E      W+     I   +KE LGE++G     KE W+WN+ VQ 
Sbjct: 345  EHLKEKILEAGLPNPEGPIQQTWSNAVEVILRCAKETLGETRGGFRGDKEAWFWNDGVQR 404

Query: 2702 VVKNKRECFKTWQQTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKIIY 2881
            VV+ K+  +K WQ+TR+ E               V++AK+   D LY  L + EGEK ++
Sbjct: 405  VVRQKKSAYKRWQRTRAPEDLSAYRTSKRLAKAAVAKAKNTEMDALYEILDSREGEKFVF 464

Query: 2882 KIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEIKERWKSYFEKLLNEENGDRQNMEEPRE 3061
            ++AK R   T+D+  +K +K+ +  +L         W+ YF+ LLNEE   + + +    
Sbjct: 465  RLAKARHLATQDIGVVKSVKNSEGAILTXXXXXXXXWEEYFDGLLNEEFARQNSSQLEAT 524

Query: 3062 IRPNTFFRRIRTSEVRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTK 3241
              P   +     +EVR A+ KMK G+A GPDG+PI+ WK LGE GV W+T+  N +    
Sbjct: 525  AGPINLWTE---NEVRRAMGKMKVGKATGPDGVPIKAWKALGEHGVKWLTRFLNTVTAKG 581

Query: 3242 RMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKLISHTMKLWERVIEHRLRMETNVSENQFG 3421
            R+PD WR+S +VPI+K KGD   CSNYRGI+L +HTMKL+ER+++ RLR    +SE QFG
Sbjct: 582  RIPDAWRRSTIVPIFKQKGDAMDCSNYRGIRLAAHTMKLYERLVDSRLRELVPISEKQFG 641

Query: 3422 FMPGRSTTEAIXXXXXXXXXXXXXXXDLHMIFIDLEKAYDRVPRDLIWWVLNKKGVTSRY 3601
            FMPGRSTT+AI                 ++ F+DLEKA+DR+PR ++W  L K+ V    
Sbjct: 642  FMPGRSTTDAIFITRQVMGKYREKRRPCYIAFLDLEKAFDRLPRQVLWRALRKRKVPEHL 701

Query: 3602 IDVIKDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFALIMDELTRQIQDEVPQC 3781
            I ++KDMYDG+ T +RT  G++    +TVG+HQGSALSP+LF L MD +T ++ D   + 
Sbjct: 702  ISLVKDMYDGSTTTIRTPHGQTGAIDVTVGVHQGSALSPFLFLLTMDVITEELMDGPLKT 761

Query: 3782 MLFADDIVLVDETK 3823
            +L+ADDI L+ E+K
Sbjct: 762  ILYADDIALIAESK 775



 Score =  184 bits (466), Expect = 3e-43
 Identities = 96/263 (36%), Positives = 146/263 (55%)
 Frame = +2

Query: 2438 IKIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNTMWNKMAACIRG 2617
            I + K+ R R E+   R +WW L   + E  K KIL+    N E      W+     I  
Sbjct: 52   IDLPKKSRTRTER---RIRWWKLHQSEREHLKEKILEAGLPNPEGPIQQTWSNAVEVILR 108

Query: 2618 VSKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXX 2797
             +KE LGE++G     KE W+WN+EVQ VV+ K+  +K WQ+TR+ E             
Sbjct: 109  CAKETLGETRGGFRGDKEAWFWNDEVQRVVRQKKSAYKRWQKTRAPEDLAAYRTSKRLAK 168

Query: 2798 XMVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEE 2977
              V++AK+   D LY KL + EGEK ++++AK R R T+D+  +K +++ +  +L K  E
Sbjct: 169  AAVAKAKNTEMDALYEKLDSREGEKFVFRLAKARHRATRDIGVVKSVRNSEGAILRKPGE 228

Query: 2978 IKERWKSYFEKLLNEENGDRQNMEEPREIRPNTFFRRIRTSEVRAALKKMKPGRALGPDG 3157
            ++ RW+ YF+ LLNEE   + + +      P   +     +EVR A+ KMK G+A GPDG
Sbjct: 229  VRRRWEEYFDGLLNEEFARQNSSQLEATAGPINLWTE---NEVRRAMGKMKVGKATGPDG 285

Query: 3158 IPIEVWKCLGEAGVSWITKMFNK 3226
            +PIE WK LGE GV  + + +++
Sbjct: 286  VPIEAWKALGEYGVKCMEEKYHR 308


>emb|CDJ93360.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 506

 Score =  354 bits (908), Expect = 2e-94
 Identities = 181/461 (39%), Positives = 264/461 (57%)
 Frame = +2

Query: 2201 GDRNDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKD 2380
            G RND G  +L  A+A+ L + +T+  +R    +T+ SG  +++ID  + R+    T KD
Sbjct: 47   GVRNDEGARVLALAIAHDLAVCSTFLAERKSQEVTYSSGGKETEIDHVLVRRSSLKTVKD 106

Query: 2381 CKVIPGESLTTQHRIMVMDIKIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPW 2560
             KV+PGE L  QHR ++ DI I    ++R   +  R +WW L     E  K KIL+    
Sbjct: 107  IKVLPGEDLAPQHRPLLADIAIDLPKKSRTS-LERRIRWWKLHQSGREHLKEKILEAGFP 165

Query: 2561 NIEDETNTMWNKMAACIRGVSKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQ 2740
            N E      W      I   ++E LGE++G     KE W+WN+EVQ VV+ K+   K WQ
Sbjct: 166  NPEGPIQQTWCNAVEVILRCARETLGETRGGFRGDKEAWFWNDEVQRVVRQKKSACKRWQ 225

Query: 2741 QTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDL 2920
            +TR+ E               V++AK+   D LY KL T EG K ++++AK R R T+D+
Sbjct: 226  RTRAPEDLSAYRTSKRLAKAAVAKAKNTEMDALYEKLDTREGGKFVFRLAKARHRATQDI 285

Query: 2921 HSIKCIKSEDSRVLVKDEEIKERWKSYFEKLLNEENGDRQNMEEPREIRPNTFFRRIRTS 3100
              +K +++ +  +L K  +++ RWK YF+ L NEE   + + +      P   +     +
Sbjct: 286  GVVKSVRNSEGAILRKPGDVRRRWKEYFDGLFNEEFARQNSSQLEATAGPINLWTE---N 342

Query: 3101 EVRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVP 3280
            EVR A+ KMK G+A G DG+PIE WK LGE GV W+T+  N +   +R+PD WR+S +VP
Sbjct: 343  EVRRAMGKMKVGKATGSDGVPIEAWKALGEHGVKWLTRFLNTVTAERRIPDAWRRSTIVP 402

Query: 3281 IYKNKGDIQCCSNYRGIKLISHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAIXX 3460
            I+K KGD   CSNYRGI+L +HTMKL+ER+++ RLR    +S  QFGFMP RSTT+AI  
Sbjct: 403  IFKQKGDAMECSNYRGIRLTAHTMKLYERLVDSRLRELVPISHEQFGFMPERSTTDAIFI 462

Query: 3461 XXXXXXXXXXXXXDLHMIFIDLEKAYDRVPRDLIWWVLNKK 3583
                           ++ F+DLEKA+DR+PR ++W  L K+
Sbjct: 463  ARQVMEKYREKRGPCYIAFLDLEKAFDRLPRQVLWRALRKR 503


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score =  349 bits (896), Expect = 5e-93
 Identities = 175/296 (59%), Positives = 214/296 (72%), Gaps = 3/296 (1%)
 Frame = +2

Query: 2945 EDSRVLVKDEEIKERWKSYFEKLLNEENGDRQNMEE--PREIRPN-TFFRRIRTSEVRAA 3115
            +D  VL ++E+I ERWKSYF +L NE      ++     RE   N  ++RRIR  EV+ A
Sbjct: 3    KDGEVLAQEEKINERWKSYFYELFNEGQKTLSSLGRLCTREKDKNFDYYRRIRDFEVKEA 62

Query: 3116 LKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNK 3295
            L +MK  RA+GPD IPIEVWK LGE  ++W+TK+FN+I+ +K+MP EWRKS LVPIYKNK
Sbjct: 63   LNQMKNDRAVGPDNIPIEVWKDLGEKDINWLTKLFNEILRSKKMPGEWRKSTLVPIYKNK 122

Query: 3296 GDIQCCSNYRGIKLISHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXX 3475
            GDIQ C NYRGIKL++HTMKLWERVIE  LR ET V+ENQFGFM GRS TEAI       
Sbjct: 123  GDIQSCENYRGIKLMTHTMKLWERVIERGLRKETQVTENQFGFMSGRSITEAIYLLRRMM 182

Query: 3476 XXXXXXXXDLHMIFIDLEKAYDRVPRDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTT 3655
                    DLHM+FIDLEKAYDRVPR+++W VL K  V   YI  IKDMYDGA T V+T 
Sbjct: 183  ERYRSNKRDLHMVFIDLEKAYDRVPREVLWKVLEKMRVRIAYIRAIKDMYDGATTSVKTQ 242

Query: 3656 AGESREFPITVGLHQGSALSPYLFALIMDELTRQIQDEVPQCMLFADDIVLVDETK 3823
             G + EFPI +GLHQGS+LSPYLF ++++ LT  IQ+ VP C+LFADDIVL+ E +
Sbjct: 243  GGVTEEFPIGIGLHQGSSLSPYLFTIVLEVLTEHIQEPVPWCILFADDIVLMGELR 298