BLASTX nr result
ID: Ephedra26_contig00001848
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00001848
(518 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006827229.1| hypothetical protein AMTR_s00010p00260490 [A... 124 1e-26
ref|XP_002318778.1| hypothetical protein POPTR_0012s11010g [Popu... 124 2e-26
gb|ACF86965.1| unknown [Zea mays] gi|195658269|gb|ACG48602.1| 60... 122 4e-26
ref|XP_006660622.1| PREDICTED: 60S ribosomal protein L34-like [O... 122 5e-26
gb|ESW11575.1| hypothetical protein PHAVU_008G041700g [Phaseolus... 122 5e-26
ref|XP_004956809.1| PREDICTED: 60S ribosomal protein L34-like is... 122 5e-26
gb|EMS57639.1| 60S ribosomal protein L34 [Triticum urartu] 122 5e-26
ref|XP_004138175.1| PREDICTED: 60S ribosomal protein L34-like [C... 122 5e-26
pdb|3J61|GG Chain g, Localization Of The Large Subunit Ribosomal... 122 5e-26
gb|ADR71242.1| 60S ribosomal protein L34B [Hevea brasiliensis] 122 5e-26
gb|ADR71241.1| 60S ribosomal protein L34A [Hevea brasiliensis] 122 5e-26
gb|AFK47541.1| unknown [Lotus japonicus] 122 5e-26
ref|XP_003573475.1| PREDICTED: 60S ribosomal protein L34-like [B... 122 5e-26
ref|XP_003573474.1| PREDICTED: 60S ribosomal protein L34-like [B... 122 5e-26
ref|NP_001236831.1| uncharacterized protein LOC100305798 [Glycin... 122 5e-26
ref|XP_002462376.1| hypothetical protein SORBIDRAFT_02g024610 [S... 122 5e-26
ref|NP_001132454.1| 60S ribosomal protein L34 [Zea mays] gi|1946... 122 5e-26
gb|EAZ09088.1| hypothetical protein OsI_31355 [Oryza sativa Indi... 122 5e-26
gb|EXC05421.1| 60S ribosomal protein L34 [Morus notabilis] 122 6e-26
gb|EXB64795.1| 60S ribosomal protein L34 [Morus notabilis] 122 6e-26
>ref|XP_006827229.1| hypothetical protein AMTR_s00010p00260490 [Amborella trichopoda]
gi|586644366|ref|XP_006827232.1| hypothetical protein
AMTR_s00010p00260730 [Amborella trichopoda]
gi|548831658|gb|ERM94466.1| hypothetical protein
AMTR_s00010p00260490 [Amborella trichopoda]
gi|548831661|gb|ERM94469.1| hypothetical protein
AMTR_s00010p00260730 [Amborella trichopoda]
Length = 120
Score = 124 bits (311), Expect = 1e-26
Identities = 67/95 (70%), Positives = 69/95 (72%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYR RHSYATKSNQTRVVKTPGGKLV+QTAKKRA GPKCP
Sbjct: 1 MVQRLTYRTRHSYATKSNQTRVVKTPGGKLVYQTAKKRASGPKCPVTGKRIQGIPHLRPT 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNR YGGVLSGGAVRERIIRAF
Sbjct: 61 EYKRTRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95
>ref|XP_002318778.1| hypothetical protein POPTR_0012s11010g [Populus trichocarpa]
gi|222859451|gb|EEE96998.1| hypothetical protein
POPTR_0012s11010g [Populus trichocarpa]
Length = 110
Score = 124 bits (310), Expect = 2e-26
Identities = 65/85 (76%), Positives = 67/85 (78%), Gaps = 8/85 (9%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------XXXXXRS 157
MVQRLTYRKRHSYATKSNQ RVVKTPGGKLV+QT KKRA GPKCP R+
Sbjct: 1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGRSRLSRN 60
Query: 156 RRTVNRPYGGVLSGGAVRERIIRAF 82
RRTVNR YGGVLSG AVRERIIRAF
Sbjct: 61 RRTVNRAYGGVLSGSAVRERIIRAF 85
>gb|ACF86965.1| unknown [Zea mays] gi|195658269|gb|ACG48602.1| 60S ribosomal
protein L34 [Zea mays] gi|414870397|tpg|DAA48954.1| TPA:
60S ribosomal protein L34 [Zea mays]
Length = 119
Score = 122 bits (307), Expect = 4e-26
Identities = 67/95 (70%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQTRVVKTPGGKLV+Q KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
RSRRTVNRPYGGVLSG AVRERIIRAF
Sbjct: 61 EYKRSRLPRSRRTVNRPYGGVLSGIAVRERIIRAF 95
>ref|XP_006660622.1| PREDICTED: 60S ribosomal protein L34-like [Oryza brachyantha]
Length = 119
Score = 122 bits (306), Expect = 5e-26
Identities = 66/95 (69%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQTRVVKTPGGKLV+Q KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNRPYGGVLSG AVRERIIRAF
Sbjct: 61 EYKRSRLYRNRRTVNRPYGGVLSGTAVRERIIRAF 95
>gb|ESW11575.1| hypothetical protein PHAVU_008G041700g [Phaseolus vulgaris]
Length = 120
Score = 122 bits (306), Expect = 5e-26
Identities = 66/95 (69%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQ RVVKTPGGKLV+QT KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNR YGGVLSGGAVRERIIRAF
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95
>ref|XP_004956809.1| PREDICTED: 60S ribosomal protein L34-like isoform X2 [Setaria
italica]
Length = 119
Score = 122 bits (306), Expect = 5e-26
Identities = 66/95 (69%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQTRVVKTPGGKLV+Q KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNRPYGGVLSG AVRERIIRAF
Sbjct: 61 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 95
>gb|EMS57639.1| 60S ribosomal protein L34 [Triticum urartu]
Length = 119
Score = 122 bits (306), Expect = 5e-26
Identities = 66/95 (69%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQTRVVKTPGGKLV+Q KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNRPYGGVLSG AVRERIIRAF
Sbjct: 61 EYKRSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 95
>ref|XP_004138175.1| PREDICTED: 60S ribosomal protein L34-like [Cucumis sativus]
gi|449477237|ref|XP_004154968.1| PREDICTED: 60S
ribosomal protein L34-like [Cucumis sativus]
Length = 120
Score = 122 bits (306), Expect = 5e-26
Identities = 66/95 (69%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQ RVVKTPGGKLV+QT KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNR YGGVLSGGAVRERIIRAF
Sbjct: 61 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAF 95
>pdb|3J61|GG Chain g, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome gi|57471712|gb|AAW50987.1| ribosomal protein
l34 [Triticum aestivum]
Length = 119
Score = 122 bits (306), Expect = 5e-26
Identities = 66/95 (69%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQTRVVKTPGGKLV+Q KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNRPYGGVLSG AVRERIIRAF
Sbjct: 61 EYKRPRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 95
>gb|ADR71242.1| 60S ribosomal protein L34B [Hevea brasiliensis]
Length = 120
Score = 122 bits (306), Expect = 5e-26
Identities = 66/95 (69%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQ RVVKTPGGKLV+QT KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNR YGGVLSGGAVRERIIRAF
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95
>gb|ADR71241.1| 60S ribosomal protein L34A [Hevea brasiliensis]
Length = 120
Score = 122 bits (306), Expect = 5e-26
Identities = 66/95 (69%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQ RVVKTPGGKLV+QT KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNR YGGVLSGGAVRERIIRAF
Sbjct: 61 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAF 95
>gb|AFK47541.1| unknown [Lotus japonicus]
Length = 120
Score = 122 bits (306), Expect = 5e-26
Identities = 66/95 (69%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQ RVVKTPGGKLV+QT KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNR YGGVLSGGAVRERIIRAF
Sbjct: 61 EYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAF 95
>ref|XP_003573475.1| PREDICTED: 60S ribosomal protein L34-like [Brachypodium distachyon]
Length = 118
Score = 122 bits (306), Expect = 5e-26
Identities = 66/95 (69%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQTRVVKTPGGKLV+Q KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNRPYGGVLSG AVRERIIRAF
Sbjct: 61 EYKRSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 95
>ref|XP_003573474.1| PREDICTED: 60S ribosomal protein L34-like [Brachypodium distachyon]
Length = 119
Score = 122 bits (306), Expect = 5e-26
Identities = 66/95 (69%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQTRVVKTPGGKLV+Q KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNRPYGGVLSG AVRERIIRAF
Sbjct: 61 EYKRSRLSRNRRTVNRPYGGVLSGPAVRERIIRAF 95
>ref|NP_001236831.1| uncharacterized protein LOC100305798 [Glycine max]
gi|356568648|ref|XP_003552522.1| PREDICTED: 60S
ribosomal protein L34-like [Glycine max]
gi|255626627|gb|ACU13658.1| unknown [Glycine max]
Length = 120
Score = 122 bits (306), Expect = 5e-26
Identities = 66/95 (69%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQ RVVKTPGGKLV+QT KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNR YGGVLSGGAVRERIIRAF
Sbjct: 61 EYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAF 95
>ref|XP_002462376.1| hypothetical protein SORBIDRAFT_02g024610 [Sorghum bicolor]
gi|241925753|gb|EER98897.1| hypothetical protein
SORBIDRAFT_02g024610 [Sorghum bicolor]
Length = 119
Score = 122 bits (306), Expect = 5e-26
Identities = 66/95 (69%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQTRVVKTPGGKLV+Q KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNRPYGGVLSG AVRERIIRAF
Sbjct: 61 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 95
>ref|NP_001132454.1| 60S ribosomal protein L34 [Zea mays] gi|194694430|gb|ACF81299.1|
unknown [Zea mays] gi|195605368|gb|ACG24514.1| 60S
ribosomal protein L34 [Zea mays]
gi|195605588|gb|ACG24624.1| 60S ribosomal protein L34
[Zea mays] gi|195611046|gb|ACG27353.1| 60S ribosomal
protein L34 [Zea mays] gi|414885417|tpg|DAA61431.1| TPA:
60S ribosomal protein L34 [Zea mays]
Length = 120
Score = 122 bits (306), Expect = 5e-26
Identities = 66/95 (69%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQTRVVKTPGGKLV+Q KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNRPYGGVLSG AVRERIIRAF
Sbjct: 61 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 95
>gb|EAZ09088.1| hypothetical protein OsI_31355 [Oryza sativa Indica Group]
gi|125605682|gb|EAZ44718.1| hypothetical protein
OsJ_29349 [Oryza sativa Japonica Group]
Length = 119
Score = 122 bits (306), Expect = 5e-26
Identities = 66/95 (69%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQTRVVKTPGGKLV+Q KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNRPYGGVLSG AVRERIIRAF
Sbjct: 61 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 95
>gb|EXC05421.1| 60S ribosomal protein L34 [Morus notabilis]
Length = 120
Score = 122 bits (305), Expect = 6e-26
Identities = 65/95 (68%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQ R+VKTPGGKLV+QT KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNR YGGVLSGGAVRERIIRAF
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95
>gb|EXB64795.1| 60S ribosomal protein L34 [Morus notabilis]
Length = 120
Score = 122 bits (305), Expect = 6e-26
Identities = 65/95 (68%), Positives = 68/95 (71%), Gaps = 18/95 (18%)
Frame = -3
Query: 312 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVFQTAKKRARGPKCP--------------- 178
MVQRLTYRKRHSYATKSNQ R+VKTPGGKLV+QT KKRA GPKCP
Sbjct: 1 MVQRLTYRKRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
Query: 177 ---XXXXXRSRRTVNRPYGGVLSGGAVRERIIRAF 82
R+RRTVNR YGGVLSGGAVRERIIRAF
Sbjct: 61 EYQRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95