BLASTX nr result

ID: Ephedra26_contig00001842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00001842
         (1222 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006852401.1| hypothetical protein AMTR_s00021p00026070 [A...    80   2e-12

>ref|XP_006852401.1| hypothetical protein AMTR_s00021p00026070 [Amborella trichopoda]
            gi|548856012|gb|ERN13868.1| hypothetical protein
            AMTR_s00021p00026070 [Amborella trichopoda]
          Length = 758

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 73/249 (29%), Positives = 99/249 (39%), Gaps = 30/249 (12%)
 Frame = -3

Query: 1190 RNFMMDRFLPAAKAMASESPHTRPN--TSISPRPNRH----REDPLPLQSR-------QY 1050
            R FM+DRFLPAA+AMASESP   P+    +   P R       D  PL +R       Q 
Sbjct: 236  RKFMIDRFLPAARAMASESPQYAPSRKPQVGNEPVRQVTNISRDGSPLVTRVPNHYLIQK 295

Query: 1049 AVKPVTKDFEEE------------AKYSPKACGLFPWRFRYALCXXXXXXXXXXXXXXXX 906
             ++     +EEE               S K CGLFPWR + ++C                
Sbjct: 296  HIQEQQAGYEEEDDDDDDDDGDYSVDSSRKVCGLFPWRLKNSICLLNPVIHAPRAKTSKQ 355

Query: 905  XXXXXXXSNAFHSDGDPLSATDTDDEELTWEAIYRQKIVNGARSNSTIAKRNAYQGQRHD 726
                     A +        T T  E+ TWEA+YR K+VNG++++  +           +
Sbjct: 356  MPLRDTSRPADYQIKTSSPVTLTQREQETWEAVYRHKLVNGSQTHEVV-----------E 404

Query: 725  DFSADTSPRRISCGSDSHLSKAARNHHHQLVNSNGWSASPSYRTASQTPP-----RPRSA 561
            D S  T        SDS  + +             +   P+Y + SQTP      R    
Sbjct: 405  DASKPT--------SDSASTPSV------------YGKQPNYSSDSQTPDDMSPYRHSMG 444

Query: 560  GISPYRNGA 534
            GISPYRN A
Sbjct: 445  GISPYRNEA 453


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