BLASTX nr result
ID: Ephedra26_contig00001680
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00001680
(2025 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002514631.1| pentatricopeptide repeat-containing protein,... 214 9e-53
gb|EPS61302.1| hypothetical protein M569_13492 [Genlisea aurea] 208 6e-51
ref|XP_006847921.1| hypothetical protein AMTR_s00029p00120280 [A... 201 1e-48
ref|XP_002302931.1| predicted protein [Populus trichocarpa] 197 1e-47
ref|XP_006345106.1| PREDICTED: pentatricopeptide repeat-containi... 194 1e-46
ref|XP_004236066.1| PREDICTED: pentatricopeptide repeat-containi... 194 2e-46
ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi... 194 2e-46
emb|CBI15328.3| unnamed protein product [Vitis vinifera] 194 2e-46
gb|EOY22114.1| Pentatricopeptide repeat-containing protein, puta... 193 2e-46
ref|XP_006477702.1| PREDICTED: pentatricopeptide repeat-containi... 192 4e-46
ref|NP_200904.1| pentatricopeptide repeat-containing protein [Ar... 192 5e-46
ref|XP_004301536.1| PREDICTED: pentatricopeptide repeat-containi... 192 6e-46
ref|XP_006440794.1| hypothetical protein CICLE_v10019809mg [Citr... 191 8e-46
gb|AAM63453.1| unknown [Arabidopsis thaliana] 191 1e-45
ref|XP_006282075.1| hypothetical protein CARUB_v10028321mg [Caps... 190 2e-45
ref|XP_003630353.1| Pentatricopeptide repeat-containing protein ... 190 2e-45
gb|AFK45023.1| unknown [Medicago truncatula] 190 2e-45
gb|ESW16823.1| hypothetical protein PHAVU_007G187600g [Phaseolus... 189 3e-45
ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containi... 187 2e-44
ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containi... 186 3e-44
>ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546235|gb|EEF47737.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 569
Score = 214 bits (546), Expect = 9e-53
Identities = 157/523 (30%), Positives = 247/523 (47%), Gaps = 6/523 (1%)
Frame = +2
Query: 41 PPCIRRFSAMPEMENPETLNSETINPETKSPKTKNP---EIKTPNSKNPERSGLGMFSEY 211
P +F+ +P + + +++T+NP + NP I KNP L +
Sbjct: 88 PTHFPKFAFLP-LSLSKPFSTQTLNPNNNVLEDPNPIAQSISAELIKNPNSDSLSI---- 142
Query: 212 SESKKKMMPYERIIELVNKDVSFIELKNTLVNSKLKTSPKSLIHILSKLPPEVGQKALVL 391
L ++ F + N++ +P ++ L+ L P+ G+ L
Sbjct: 143 ---------------LQRLNLHFSHINNSI-------TPSIILQTLN-LSPDAGRTVLGF 179
Query: 392 YNWATQLPECKPNLELFNSFAFWFSKVDDYRSVEYMLEKNSDKRENALELDGKTFECIVK 571
+ W ++ K E + F +F + D++S +L + D + K FE +V
Sbjct: 180 HQWLVKVANFKNTDETISFFIDYFGRRKDFQSTHELLCDSKDV------IGYKCFESMVN 233
Query: 572 GLIVGSGTIKAVRHAMILFNRME-EYGMERTPEAKNFLVKHLCDGGYGAETEELVKRYAD 748
L+ K M F+RME +YG +R E +VK LCD GY + E++VK A+
Sbjct: 234 RLVRAGRATKV----MGFFDRMERDYGFKRDRENLRLVVKMLCDNGYASYAEKMVKNLAN 289
Query: 749 RFYPDEQITSLIVRGYCRSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCID 928
+PDE I L+++G+C GKL DEA+R+ EM + VAYNA+L VCKLC +
Sbjct: 290 EIFPDENICDLLIKGWCVDGKL---DEAKRLAGEMYRGGFEIGTVAYNAILDCVCKLCRE 346
Query: 929 REPFLMAQEVCKLFDEMKAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPE 1108
++PF + EV K+ EM G+ N TFN+ + L +RKTQ A LF+RM E+G P+
Sbjct: 347 KDPFKIESEVEKVLVEMDTRGVPRNVETFNVLITNLCKMRKTQDALNLFNRMREWGCDPD 406
Query: 1109 QFTYETMIKALYYQCRTEDGHELRQKMYEAGYTGTLG--FYSASIVILTAKSRKEHALKV 1282
T+ +I++LY R +G E+ +M +GY L Y + IL R EHA+ V
Sbjct: 407 DTTFLVLIRSLYQAARVGEGDEMIDRMKSSGYGNKLDKKAYYGFLKILCGIERLEHAVSV 466
Query: 1283 FWAMKEKGVVPHKKIYSILVRRLWMDDDEARAEQLFDEALKDHVFTPDMRQKIMXXXXXX 1462
F MK G P K Y +L+ + + + LF+EAL++ V P ++
Sbjct: 467 FEMMKADGCKPGIKTYDLLIGKWCTRNRVDKGNALFNEALRNGV--PVAPKEYKVDEKYM 524
Query: 1463 XXXXXXXXXXRGPTIAEMKKIKIKRDTQKRLSYVRKPKKLSTR 1591
+ T+ E K +R Q RLS+V+KPKK+ R
Sbjct: 525 KKPKAVKKEKKRETLPEKMARKRRRLKQIRLSFVKKPKKMMRR 567
>gb|EPS61302.1| hypothetical protein M569_13492 [Genlisea aurea]
Length = 536
Score = 208 bits (530), Expect = 6e-51
Identities = 144/428 (33%), Positives = 216/428 (50%), Gaps = 4/428 (0%)
Frame = +2
Query: 308 SKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRS 487
S + +P L+ L+ + P+ G+ L WA P P E+F+ + +F + D+++
Sbjct: 118 SHVTVTPALLLATLN-ISPDAGRTVLDFLTWAKSRPGFSPTDEVFSYYVNYFGRRKDFKA 176
Query: 488 VEYMLEKNSDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTP 664
+L +D RE + K FE IV L+ KAV LF+RME +YG ER+
Sbjct: 177 AHEVL---ADNRE---AVGVKCFEAIVDRLVRAGRPNKAVE----LFDRMEADYGFERSF 226
Query: 665 EAKNFLVKHLCDGGYGAETEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVM 844
++ ++ LC+ G+ + E++VK A F+PD I ++ G+C GKL DEARR+M
Sbjct: 227 DSLKHIISCLCERGHASHAEKMVKSLASEFFPDAYICDALISGWCIDGKL---DEARRLM 283
Query: 845 KEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIA 1024
EM + T AYN+LL VC+LC +++ F + E KL EM+ G+ N TFN+
Sbjct: 284 NEMHRGGFEMTTFAYNSLLDCVCRLCREKDRFRLQSEAQKLLVEMERNGVPRNVDTFNVL 343
Query: 1025 LYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGY 1204
+ L +RKT+ A LF RM E+G P++ TY +IK+LY R +G ++ +M AGY
Sbjct: 344 ITNLCRIRKTEEAMNLFSRMGEWGCYPDETTYIVLIKSLYRAARISEGDDMMDRMKSAGY 403
Query: 1205 TGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARA 1378
L Y I +L R HAL VF MKE G P K Y +L+R+L +A
Sbjct: 404 GDALDKKVYYEFIRVLCGVERISHALAVFAKMKE-GCRPGIKTYDLLMRKLCAHGRVEKA 462
Query: 1379 EQLFDEALKDHVFTPDMRQKI-MXXXXXXXXXXXXXXXXRGPTIAEMKKIKIKRDTQKRL 1555
L+ EA ++ V ++ T+ E K +R Q RL
Sbjct: 463 NALYKEAERNGVAVEPKEYRVDPKFVPTAKSAAAAKKTTTRETLPEKMARKRRRLKQIRL 522
Query: 1556 SYVRKPKK 1579
S+V+KPKK
Sbjct: 523 SFVKKPKK 530
>ref|XP_006847921.1| hypothetical protein AMTR_s00029p00120280 [Amborella trichopoda]
gi|548851226|gb|ERN09502.1| hypothetical protein
AMTR_s00029p00120280 [Amborella trichopoda]
Length = 466
Score = 201 bits (510), Expect = 1e-48
Identities = 142/477 (29%), Positives = 234/477 (49%), Gaps = 7/477 (1%)
Frame = +2
Query: 182 RSGLGMFSEYSESKKKMMPYERIIELVNKDVSFIELKNTLVNSKLKTSPKSLIHILSKLP 361
RS L + S + + + + EL++ D L+ L S ++ +P+ L H+L+
Sbjct: 12 RSSLRFSTIASHELELPLSWVKASELLHSDSP---LEENLGQSNIEPTPELLSHLLNT-S 67
Query: 362 PEVGQKALVLYNWATQLPECK-PNLELFNSFAFWFSKVDDYRSVEYMLEKNSDKRENALE 538
P+ G+K L Y++A + P P+ E S +F + D++++ + +
Sbjct: 68 PKAGRKVLGFYSYALKHPSSFIPSDETSKSLVDYFGRRKDFKAINLLFSETPPAPTGP-- 125
Query: 539 LDGKTFECIVKGLIVGSGTIKAVRHAMILFNRMEEYGMERTPEAKNFLVKHLCDGGYGAE 718
KTF ++ L+ +AV F ME+ G + +A V LC+ G+ E
Sbjct: 126 ---KTFASVIDRLVRAGRAKQAVG----FFEDMEKLGFSKDKDALIVTVGSLCNHGFARE 178
Query: 719 TEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVMKEMAIAQLKPTYVAYNAL 898
EELVKR AD +PD+ I +V+G+C S KL DEA+R++ E+ + AYN++
Sbjct: 179 AEELVKRMADSIFPDQAICHALVKGWCVSEKL---DEAKRLVGEIYRGGFELGPTAYNSI 235
Query: 899 LKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIALYYLGLVRKTQVAFELFH 1078
L+ VCKLC R+P + E K+ EM+ G+ N TFN+ + +RKTQVA LF
Sbjct: 236 LECVCKLCRKRDPLRLESETEKVLLEMETSGVARNTETFNVLIKSYCKIRKTQVAMNLFE 295
Query: 1079 RMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGYTGTLGFYSASIVILTAKS 1258
M E+G SP+ TY +I++LY R +G E+ ++M +G+ + Y + +L
Sbjct: 296 SMSEWGCSPDSETYTLLIRSLYQAARLGEGDEMLEEMKASGFGVNIKTYYGFLKVLCGIE 355
Query: 1259 RKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARAEQLFDEA------LKDHVFT 1420
R +HA+K+F MK+ G P + +L+ +L + +A++L EA +K V+
Sbjct: 356 RIDHAMKLFEMMKKDGCEPGSMTFDLLIWKLCVHGRAEQADKLCKEAEERGVTIKSAVYE 415
Query: 1421 PDMRQKIMXXXXXXXXXXXXXXXXRGPTIAEMKKIKIKRDTQKRLSYVRKPKKLSTR 1591
D R + T+ + K KR + RLS+V+KPKKL R
Sbjct: 416 VDPR--------FVEKKKVKKEKPKRETLPMKMERKRKRLRKLRLSFVKKPKKLMRR 464
>ref|XP_002302931.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 197 bits (502), Expect = 1e-47
Identities = 131/419 (31%), Positives = 211/419 (50%), Gaps = 3/419 (0%)
Frame = +2
Query: 332 SLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRSVEYMLEKN 511
SL+ KL P+ G+ + +NW + + N E F +F + D+++ +L
Sbjct: 107 SLVLQTLKLSPDAGRTVIGFHNWLIKDANFEQNDESLALFVDYFGRRKDFKAAHDLLV-- 164
Query: 512 SDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTPEAKNFLVK 688
E K FE ++ L+ T + + F RME +YG +R E+ F+V+
Sbjct: 165 ----EGKSVAGVKCFESMIDRLVRAGRTTQVIG----FFERMERDYGFKRDKESLTFVVQ 216
Query: 689 HLCDGGYGAETEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVMKEMAIAQL 868
LC+ GY + E++VK A+ +PD+ I L+++G+C GKL +EA+R+ EM
Sbjct: 217 KLCENGYASYAEKMVKNLANEIFPDDGICDLLIKGWCVDGKL---EEAKRLAGEMYRGGF 273
Query: 869 KPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIALYYLGLVR 1048
+ +A+NA+L VCKLC +++PF + EV K+ EM G+ N TFN+ + L VR
Sbjct: 274 EIGTMAFNAMLDCVCKLCREKDPFRLESEVEKVLMEMDIRGVPRNVETFNVLISNLCKVR 333
Query: 1049 KTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGYTGTLG--F 1222
+T+ A +LF R+ E+G P++ T+ +I++LY R +G E+ +M AGY L
Sbjct: 334 RTEDAMKLFSRIGEWGCCPDETTFLVLIRSLYQAARVGEGDEMIDRMKSAGYGDKLDKKA 393
Query: 1223 YSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARAEQLFDEAL 1402
Y + IL R EHA+ VF MK G P K Y +L+ + + +A L++EAL
Sbjct: 394 YYGFLKILCGIERLEHAMSVFEMMKADGCKPGIKTYDLLMGKWCTHNRLDKANVLYNEAL 453
Query: 1403 KDHVFTPDMRQKIMXXXXXXXXXXXXXXXXRGPTIAEMKKIKIKRDTQKRLSYVRKPKK 1579
+ V ++ + T+ E K +R Q RLS+V+KPKK
Sbjct: 454 SNGVTVTPKEYRV--DPKFMKKPKAVKKEKKRETLPEKMARKRRRLKQIRLSFVKKPKK 510
>ref|XP_006345106.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
mitochondrial-like [Solanum tuberosum]
Length = 521
Score = 194 bits (493), Expect = 1e-46
Identities = 139/467 (29%), Positives = 232/467 (49%), Gaps = 4/467 (0%)
Frame = +2
Query: 203 SEYSESKKKMMPYERIIELVNKDVSFIELKNTLVNSKLKTSPKSLIHILSKLPPEVGQKA 382
S+ E+ + + E + EL + +S I L S + +P SLI L P+ G+
Sbjct: 70 SDQEETTAQSLSSELVKELDAESLS-IPQSLDLSFSHVNLTP-SLILTTLNLSPDAGRTV 127
Query: 383 LVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRSVEYMLEKNSDKRENALELDG-KTFE 559
L + W K + E+ + F +F + D+++ + +L + + L G KT E
Sbjct: 128 LGFFKWVKSKESFKVDDEVVSYFVDYFGRRKDFKAAQDVLI-------DGIGLAGRKTLE 180
Query: 560 CIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTPEAKNFLVKHLCDGGYGAETEELVK 736
+V L+ + + V F ME +YG+ R ++ +V LC+ G+ + E++VK
Sbjct: 181 SMVDRLVRAGRSTQTVA----FFENMEKDYGLVRDLDSLKLVVSRLCEHGFASYAEKMVK 236
Query: 737 RYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCK 916
A F+PDE I +++RG+C GKL DEA+R+ EM + AYNA+L VCK
Sbjct: 237 SLASEFFPDEYICDMLIRGWCIDGKL---DEAQRLAGEMYRGGFEIGASAYNAILDCVCK 293
Query: 917 LCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFG 1096
LC ++PF + E + EM+ G+ + TFN+ + L +RKT+ A LF+RM E+G
Sbjct: 294 LCRKKDPFRLQSEAENVLLEMEEKGVPRDVETFNVLITNLCKIRKTEDALNLFYRMGEWG 353
Query: 1097 VSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGYTGTLG--FYSASIVILTAKSRKEH 1270
+P++ T+ T+I++LY R +G E+ +M AG+ L Y + IL R +H
Sbjct: 354 CNPDETTFLTLIRSLYQAARVGEGDEMIDRMKSAGFGDALDKKAYYEFLKILCGIERLDH 413
Query: 1271 ALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARAEQLFDEALKDHVFTPDMRQKIMXX 1450
A+ VF MKE G P K Y +L+ ++ + +A L+ EA + + + + ++
Sbjct: 414 AMSVFAKMKEDGCKPGLKTYDLLIGKMVAHNRVDKANALYKEA-ESNELAVEPKAYMVHP 472
Query: 1451 XXXXXXXXXXXXXXRGPTIAEMKKIKIKRDTQKRLSYVRKPKKLSTR 1591
+ T E K + + RLSYV+KPKK++ R
Sbjct: 473 KYAKKKSAPAKKEKKRETFPEKMARKRTKLKKIRLSYVKKPKKMARR 519
>ref|XP_004236066.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Solanum lycopersicum]
Length = 522
Score = 194 bits (492), Expect = 2e-46
Identities = 130/424 (30%), Positives = 209/424 (49%), Gaps = 4/424 (0%)
Frame = +2
Query: 332 SLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRSVEYMLEKN 511
SLI L P+ G+ L + W K + E+ + F +F + D+++ + +L
Sbjct: 111 SLILTTLNLSPDAGRTVLGFFKWVKSKESFKVDDEVVSCFVDYFGRRKDFKAAQDVLI-- 168
Query: 512 SDKRENALELDG-KTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTPEAKNFLV 685
+ + L G KT E +V L+ + V F ME +YG+ R ++ +V
Sbjct: 169 -----DGIGLTGRKTLESMVDRLVRAGRPTQTVA----FFENMEKDYGLARDLDSLKLVV 219
Query: 686 KHLCDGGYGAETEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVMKEMAIAQ 865
LC+ G+ + E++VK A F+PDE I ++VRG+C GKL DEA+R+ EM
Sbjct: 220 SRLCEHGFASYAEKMVKSLACEFFPDEYICDMLVRGWCIDGKL---DEAQRLAGEMYRGG 276
Query: 866 LKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIALYYLGLV 1045
+ AYNA+L VCKLC ++PF + E + EM+ G+ + TFN+ + L +
Sbjct: 277 FEIGASAYNAILDCVCKLCRKKDPFRLQSEAENVLLEMEEKGVPRDVETFNVLITNLCKI 336
Query: 1046 RKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGYTGTLG-- 1219
RKT+ A LF+RM E+G +P++ T+ T+I++LY R +G E+ +M AG+ L
Sbjct: 337 RKTEDALNLFYRMGEWGCNPDETTFLTLIRSLYQAARVGEGDEMIDRMRSAGFGDALDKK 396
Query: 1220 FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARAEQLFDEA 1399
Y + IL R +HA+ VF MKE G P K Y +L+ ++ + +A L+ EA
Sbjct: 397 AYYEFLKILCGIERLDHAMSVFAKMKEDGCKPGLKTYDLLIGKMVAHNRVDKANALYKEA 456
Query: 1400 LKDHVFTPDMRQKIMXXXXXXXXXXXXXXXXRGPTIAEMKKIKIKRDTQKRLSYVRKPKK 1579
+ + + + T E K + + RLSYV+KPKK
Sbjct: 457 ESNDLAVEPKAYMVHPKYAKKKSAPAKKEEKKRETFPEKMARKRTKLKKIRLSYVKKPKK 516
Query: 1580 LSTR 1591
++ R
Sbjct: 517 MARR 520
>ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Vitis vinifera]
Length = 516
Score = 194 bits (492), Expect = 2e-46
Identities = 130/428 (30%), Positives = 212/428 (49%), Gaps = 3/428 (0%)
Frame = +2
Query: 308 SKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRS 487
S + SP ++ L+ P+ G+ L Y W + P+ + E + F +F + D+++
Sbjct: 101 SHITPSPPLILQTLNT-SPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKA 159
Query: 488 VEYMLEKNSDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTP 664
+ +L D R A KT E + L+ + V F+RME +YG R
Sbjct: 160 IHEVL---MDGRNFA---GAKTLESAIDRLVRAGRATQVVS----FFDRMEVDYGFRRDR 209
Query: 665 EAKNFLVKHLCDGGYGAETEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVM 844
E+ +V LC+ G+ + E++VK A+ +P+E I L+++G+C GKL DEARR+
Sbjct: 210 ESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKL---DEARRLA 266
Query: 845 KEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIA 1024
+EM + +AYN++L +CKLC ++PF + E K+ +M G+ N TFN+
Sbjct: 267 EEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGVPRNVETFNVL 326
Query: 1025 LYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGY 1204
+ L +RKT+ A +LF+RM E+G P + T+ + ++LY R +G E+ +M AG+
Sbjct: 327 ITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKSAGF 386
Query: 1205 TGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARA 1378
L Y I IL R +HA+ +F MKE G P K Y +L+ +L +A
Sbjct: 387 GNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGKLCAHGRLDKA 446
Query: 1379 EQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXXRGPTIAEMKKIKIKRDTQKRLS 1558
LF EA+ V K+ + T+ E K +R + RLS
Sbjct: 447 NALFSEAVNRGVPVESKAYKL--DPRFVKKPTVAKKEKKRETLPEKMARKRRRLRKIRLS 504
Query: 1559 YVRKPKKL 1582
+V+KPK++
Sbjct: 505 FVKKPKRM 512
>emb|CBI15328.3| unnamed protein product [Vitis vinifera]
Length = 532
Score = 194 bits (492), Expect = 2e-46
Identities = 130/428 (30%), Positives = 212/428 (49%), Gaps = 3/428 (0%)
Frame = +2
Query: 308 SKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRS 487
S + SP ++ L+ P+ G+ L Y W + P+ + E + F +F + D+++
Sbjct: 117 SHITPSPPLILQTLNT-SPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKA 175
Query: 488 VEYMLEKNSDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTP 664
+ +L D R A KT E + L+ + V F+RME +YG R
Sbjct: 176 IHEVL---MDGRNFA---GAKTLESAIDRLVRAGRATQVVS----FFDRMEVDYGFRRDR 225
Query: 665 EAKNFLVKHLCDGGYGAETEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVM 844
E+ +V LC+ G+ + E++VK A+ +P+E I L+++G+C GKL DEARR+
Sbjct: 226 ESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKL---DEARRLA 282
Query: 845 KEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIA 1024
+EM + +AYN++L +CKLC ++PF + E K+ +M G+ N TFN+
Sbjct: 283 EEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGVPRNVETFNVL 342
Query: 1025 LYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGY 1204
+ L +RKT+ A +LF+RM E+G P + T+ + ++LY R +G E+ +M AG+
Sbjct: 343 ITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKSAGF 402
Query: 1205 TGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARA 1378
L Y I IL R +HA+ +F MKE G P K Y +L+ +L +A
Sbjct: 403 GNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGKLCAHGRLDKA 462
Query: 1379 EQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXXRGPTIAEMKKIKIKRDTQKRLS 1558
LF EA+ V K+ + T+ E K +R + RLS
Sbjct: 463 NALFSEAVNRGVPVESKAYKL--DPRFVKKPTVAKKEKKRETLPEKMARKRRRLRKIRLS 520
Query: 1559 YVRKPKKL 1582
+V+KPK++
Sbjct: 521 FVKKPKRM 528
>gb|EOY22114.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 494
Score = 193 bits (491), Expect = 2e-46
Identities = 141/447 (31%), Positives = 219/447 (48%), Gaps = 6/447 (1%)
Frame = +2
Query: 257 LVNKDVSFIELKNTLVNSKLKTSPKSL-IHILSKLPPEVGQKALVLYNWATQLPECKPNL 433
L N D+ + + L S P SL I L PE G+ L +W P
Sbjct: 60 LKNPDLDPLPITQRLQLSFSHIKPTSLLISQTLNLSPEAGRTVLGFNDWLLSDPNFNHTD 119
Query: 434 ELFNSFAFWFSKVDDYRSVEYMLEKNSDKRENALELDGKTFECIVKGLIVGSGTIKAVRH 613
E + F +F + D+++ +L N KTFE V L+ +A R
Sbjct: 120 ETLSFFIDYFGRRKDFKAAHDLLVNNKSVA------GPKTFESSVDRLV------RAGRP 167
Query: 614 AMIL--FNRM-EEYGMERTPEAKNFLVKHLCDGGYGAETEELVKRYADRFYPDEQITSLI 784
A +L F M ++YG +R E+ +V+ LC+ GY + E++VK A+ +PDE I L+
Sbjct: 168 AQVLGFFEGMGKDYGFKRDKESLRLIVEKLCENGYASYAEKMVKNSANEIFPDEMICDLL 227
Query: 785 VRGYCRSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCK 964
++G+C GKL +EA+R+ EM + +AYNA+L VCKLC ++PF + E K
Sbjct: 228 IKGWCVDGKL---EEAKRLAGEMYRGGFEIGTMAYNAMLDCVCKLCRKKDPFRLHSEAEK 284
Query: 965 LFDEMKAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALY 1144
+ +M G+ N TFN+ + L +RKT+ A +LF+RM E+G P+ +Y +I++LY
Sbjct: 285 VLLDMDIYGVPRNVETFNVLMNNLCKIRKTEDAMKLFYRMGEWGCYPDAESYLILIRSLY 344
Query: 1145 YQCRTEDGHELRQKMYEAGYTGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPH 1318
R +G E+ +M AG+ LG Y + + IL R EHA+ VF MK G P
Sbjct: 345 QAARVAEGDEMIDRMKSAGFGDKLGEKEYYSFLKILCGVERVEHAIIVFKKMKADGCKPG 404
Query: 1319 KKIYSILVRRLWMDDDEARAEQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXXRG 1498
K Y +L+ + + RA L++EA+++ V P + +
Sbjct: 405 IKTYDLLMGKWCGHNRLDRANALYNEAVENGV--PVEPKPYRVDPRYMKKTKAVKEEKKR 462
Query: 1499 PTIAEMKKIKIKRDTQKRLSYVRKPKK 1579
T+ E K +R Q RLS+V+KPK+
Sbjct: 463 ETLPEKMARKRRRLKQIRLSFVKKPKR 489
>ref|XP_006477702.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
mitochondrial-like [Citrus sinensis]
Length = 503
Score = 192 bits (489), Expect = 4e-46
Identities = 135/451 (29%), Positives = 221/451 (49%), Gaps = 3/451 (0%)
Frame = +2
Query: 248 IIELVNKDVSFIELKNTLVNSKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKP 427
++E + D I + L+ S + +P SL+ PE G+ L +W TQ
Sbjct: 71 LLENLEADPLPISQRLHLIFSHVTPTP-SLVQSTLNFSPEAGRAILGFNHWLTQNANFSH 129
Query: 428 NLELFNSFAFWFSKVDDYRSVEYMLEKNSDKRENALELDGKTFECIVKGLIVGSGTIKAV 607
E + F +F + D++++ L N + L KT + L+ +A
Sbjct: 130 TDETLSFFTDYFGRRKDFKAIHDFLVDNKEV------LGPKTLASCIDRLV------RAG 177
Query: 608 RHAMIL--FNRME-EYGMERTPEAKNFLVKHLCDGGYGAETEELVKRYADRFYPDEQITS 778
R +L F RME +YG +R ++ +V+ LC+ GY + E+LVK A+ +PD++I
Sbjct: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICD 237
Query: 779 LIVRGYCRSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEV 958
L+++G+C GKL DEA+R+ +EM + VAYN +L V KLC ++PF + E
Sbjct: 238 LLIKGWCVDGKL---DEAKRLAREMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
Query: 959 CKLFDEMKAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKA 1138
K+ +M+ G+ N TFN+ + L +R+++ A +LF+RM E+G P + T+ +IK+
Sbjct: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRSEDAIKLFYRMGEWGCHPNETTFLVLIKS 354
Query: 1139 LYYQCRTEDGHELRQKMYEAGYTGTLGFYSASIVILTAKSRKEHALKVFWAMKEKGVVPH 1318
LY R +G E+ +M AGY Y + L R E A+ VF MK G P
Sbjct: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
Query: 1319 KKIYSILVRRLWMDDDEARAEQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXXRG 1498
+ Y +L+R+ + +A LFDEA+++ V ++ +
Sbjct: 415 TETYDLLMRKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV--DPRYLKKPIAVKKGKKR 472
Query: 1499 PTIAEMKKIKIKRDTQKRLSYVRKPKKLSTR 1591
T+ E K +R Q RLS+V+KPK+ R
Sbjct: 473 ETLPEKMARKRRRLKQIRLSFVKKPKRTMMR 503
>ref|NP_200904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262710|sp|Q9FME4.1|PP438_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein PNM1,
mitochondrial; AltName: Full=PPR PROTEIN LOCALIZED TO THE
NUCLEUS AND MITOCHONDRIA 1; Flags: Precursor
gi|10177319|dbj|BAB10645.1| unnamed protein product
[Arabidopsis thaliana] gi|332010020|gb|AED97403.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 521
Score = 192 bits (488), Expect = 5e-46
Identities = 139/433 (32%), Positives = 211/433 (48%), Gaps = 3/433 (0%)
Frame = +2
Query: 308 SKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRS 487
S + +P ++ L+ L PE G+ AL W E + F +F + D++
Sbjct: 103 SHITPNPDLILQTLN-LSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKG 161
Query: 488 VEYMLEKNSDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTP 664
MLE S + A GKT E + L V +G K V F +ME +YG++R
Sbjct: 162 ---MLEIISKYKGIA---GGKTLESAIDRL-VRAGRPKQVTD---FFEKMENDYGLKRDK 211
Query: 665 EAKNFLVKHLCDGGYGAETEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVM 844
E+ +VK LC+ G+ + E++VK A+ +PDE I L++ G+C + KL DEA R+
Sbjct: 212 ESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKL---DEATRLA 268
Query: 845 KEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIA 1024
EM+ + AYN +L VCKLC ++PF + EV K+ EM+ G+ N TFN+
Sbjct: 269 GEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVL 328
Query: 1025 LYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGY 1204
+ L +R+T+ A LF RM E+G P+ TY +I++LY R +G E+ KM AGY
Sbjct: 329 INNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGY 388
Query: 1205 TGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARA 1378
L Y + IL R EHA+ VF +MK G P K Y +L+ ++ ++ RA
Sbjct: 389 GELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRA 448
Query: 1379 EQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXXRGPTIAEMKKIKIKRDTQKRLS 1558
L+ EA K + ++ + T+ E K KR Q +S
Sbjct: 449 NGLYKEAAKKGIAVSPKEYRVDPRFMKKKTKEVDSNVKKRETLPEKTARKKKRLKQINMS 508
Query: 1559 YVRKPKKLSTRRI 1597
+V+KP RR+
Sbjct: 509 FVKKPHNKMRRRM 521
>ref|XP_004301536.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 517
Score = 192 bits (487), Expect = 6e-46
Identities = 135/436 (30%), Positives = 210/436 (48%), Gaps = 4/436 (0%)
Frame = +2
Query: 284 ELKNTLVNSKLKTSPK-SLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFW 460
++ TL +S +P SL+ + L E G+ L W P E + F +
Sbjct: 92 DVTKTLQSSFPNVTPTPSLVLSVLNLSAEAGRAVLGFNQWLIHNPRFDHTDETLSYFVDY 151
Query: 461 FSKVDDYRSVEYMLEKNSDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMILFNRME 640
F + D+++ ++ + D KT + L+ +AV +F +ME
Sbjct: 152 FGRRKDFKATHDVILSSRDVA------GPKTLAASIDRLVRAGRPAQAVS----MFEKME 201
Query: 641 E-YGMERTPEAKNFLVKHLCDGGYGAETEELVKRYADRFYPDEQITSLIVRGYCRSGKLG 817
E YG++R A +V+ LC+ G+ + E++VK + F+PDE + L+++G+C GKL
Sbjct: 202 EEYGIKRDKAALRLVVEKLCEYGFASNAEKMVKGLVNEFFPDEYMCDLLIKGWCVDGKL- 260
Query: 818 NYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGIT 997
DEARR+ EM + A+NA+L VCKLC ++PF + E ++ +M G+
Sbjct: 261 --DEARRLAGEMYRGGFEIGTSAFNAILDCVCKLCRKKDPFRLHSEAEQILVDMDYHGVP 318
Query: 998 PNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHEL 1177
N TFN+ + L +RKT A LFHRM E+G SP + T+ + ++LY R +G E+
Sbjct: 319 RNVETFNVLITNLCKIRKTNDALNLFHRMGEWGCSPNETTFLELTRSLYQAARVGEGDEM 378
Query: 1178 RQKMYEAGYTGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRL 1351
+M AG+ L Y + IL R +HAL VF MK+ G P K Y +L+ +L
Sbjct: 379 IDRMKSAGFGEALDKKAYFGFLKILCGIERIDHALSVFKKMKQDGCEPGIKTYDLLMGKL 438
Query: 1352 WMDDDEARAEQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXXRGPTIAEMKKIKI 1531
+ + RA LF+EA K V + K T+ E K
Sbjct: 439 YAQNRADRATALFNEAQKKEV---PVTHKTYQVDSKYLKKPKAKKENTRETLPEKMARKR 495
Query: 1532 KRDTQKRLSYVRKPKK 1579
+R Q RLS+V+KPKK
Sbjct: 496 RRLKQIRLSFVKKPKK 511
>ref|XP_006440794.1| hypothetical protein CICLE_v10019809mg [Citrus clementina]
gi|557543056|gb|ESR54034.1| hypothetical protein
CICLE_v10019809mg [Citrus clementina]
Length = 503
Score = 191 bits (486), Expect = 8e-46
Identities = 135/451 (29%), Positives = 220/451 (48%), Gaps = 3/451 (0%)
Frame = +2
Query: 248 IIELVNKDVSFIELKNTLVNSKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKP 427
++E + D I + L+ S + +P SL+ PE G+ L +W TQ
Sbjct: 71 LLENLEADPLPISQRLHLIFSHVTPTP-SLVQSTLNFSPEAGRAILGFNHWLTQNANFSH 129
Query: 428 NLELFNSFAFWFSKVDDYRSVEYMLEKNSDKRENALELDGKTFECIVKGLIVGSGTIKAV 607
E + F +F + D++++ L N + L KT + L+ +A
Sbjct: 130 TDETLSFFTDYFGRRKDFKAIHDFLVDNKEV------LGPKTLASCIDRLV------RAG 177
Query: 608 RHAMIL--FNRME-EYGMERTPEAKNFLVKHLCDGGYGAETEELVKRYADRFYPDEQITS 778
R +L F RME +YG +R ++ +V+ LC+ GY + E+LVK A+ +PD++I
Sbjct: 178 RPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICD 237
Query: 779 LIVRGYCRSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEV 958
L+++G+C GKL DEA+R+ EM + VAYN +L V KLC ++PF + E
Sbjct: 238 LLIKGWCVDGKL---DEAKRLAGEMYRGGFELGTVAYNCILDCVSKLCRKKDPFRLDSEA 294
Query: 959 CKLFDEMKAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKA 1138
K+ +M+ G+ N TFN+ + L +R+T+ A +LF+RM E+G P + T+ +IK+
Sbjct: 295 EKVLLDMEYNGVPRNVETFNVLISNLCKIRRTEDAVKLFYRMGEWGCHPNETTFLVLIKS 354
Query: 1139 LYYQCRTEDGHELRQKMYEAGYTGTLGFYSASIVILTAKSRKEHALKVFWAMKEKGVVPH 1318
LY R +G E+ +M AGY Y + L R E A+ VF MK G P
Sbjct: 355 LYQAARVGEGDEMIDRMKSAGYAIGKKDYYEFLTRLCGIERIEQAMSVFEKMKTDGHNPD 414
Query: 1319 KKIYSILVRRLWMDDDEARAEQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXXRG 1498
+ Y +L+ + + +A LFDEA+++ V ++ +
Sbjct: 415 SETYDLLMTKWCAHNRVDKANALFDEAVRNGVEVKPKEYRV--DPRYLKKPIAVKKGKKR 472
Query: 1499 PTIAEMKKIKIKRDTQKRLSYVRKPKKLSTR 1591
T+ E K +R Q RLS+V+KPK++ R
Sbjct: 473 ETLPEKMARKRRRLKQIRLSFVKKPKRMMMR 503
>gb|AAM63453.1| unknown [Arabidopsis thaliana]
Length = 521
Score = 191 bits (485), Expect = 1e-45
Identities = 135/433 (31%), Positives = 209/433 (48%), Gaps = 3/433 (0%)
Frame = +2
Query: 308 SKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRS 487
S + +P ++ L+ L PE G+ AL W E + F +F + D++
Sbjct: 103 SHITPNPDLILQTLN-LSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKG 161
Query: 488 VEYMLEKNSDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTP 664
+ ++ K GKT E + L V +G K V F +ME +YG++R
Sbjct: 162 MLGIISKYKGIA------GGKTLESAIDRL-VRAGRPKQVTD---FFEKMENDYGLKRDK 211
Query: 665 EAKNFLVKHLCDGGYGAETEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVM 844
E+ +VK LC+ G+ + E++VK A+ +PDE I L++ G+C + KL DEA R+
Sbjct: 212 ESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKL---DEATRLA 268
Query: 845 KEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIA 1024
EM+ + AYN +L VCKLC ++PF + EV K+ EM+ G+ N TFN+
Sbjct: 269 GEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVL 328
Query: 1025 LYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGY 1204
+ L +R+T+ A LF RM E+G P+ TY +I++LY R +G E+ KM AGY
Sbjct: 329 INNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGY 388
Query: 1205 TGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARA 1378
L Y + IL R EHA+ VF +MK G P K Y +L+ ++ ++ RA
Sbjct: 389 GELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRA 448
Query: 1379 EQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXXRGPTIAEMKKIKIKRDTQKRLS 1558
L+ EA K + ++ + T+ E K KR Q +S
Sbjct: 449 NGLYKEAAKKGIAVSPKEYRVDPRFMKKKTKEVDSNVKKRETLPEKTARKKKRLKQINMS 508
Query: 1559 YVRKPKKLSTRRI 1597
+V+KP RR+
Sbjct: 509 FVKKPHNKMRRRM 521
>ref|XP_006282075.1| hypothetical protein CARUB_v10028321mg [Capsella rubella]
gi|482550779|gb|EOA14973.1| hypothetical protein
CARUB_v10028321mg [Capsella rubella]
Length = 522
Score = 190 bits (482), Expect = 2e-45
Identities = 134/433 (30%), Positives = 210/433 (48%), Gaps = 3/433 (0%)
Frame = +2
Query: 308 SKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRS 487
S + +P ++ L+ L PE G+ AL W E + F +F + D++
Sbjct: 104 SHITPNPDLILQTLN-LSPEAGRAALGFNEWLDSSNGFSHTDETVSYFVDYFGRRKDFKG 162
Query: 488 VEYMLEKNSDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERTP 664
+ ++ K KT E + L V +G K V F +ME +YG++R
Sbjct: 163 MLEIISKYKGIS------GAKTLESAIDRL-VRAGRPKQVTD---FFEKMENDYGLKRDK 212
Query: 665 EAKNFLVKHLCDGGYGAETEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRVM 844
E+ +VK LC+ G+ + E++VK A+ +PDE I L++ G+C + KL DEA R+
Sbjct: 213 ESLTLVVKKLCEKGHASIAEKMVKNTANDIFPDENICDLLISGWCTAEKL---DEATRLA 269
Query: 845 KEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNIA 1024
EM+ + AYN +L VCKLC ++PF + EV K+ EM+ G+ N TFN+
Sbjct: 270 GEMSRGGFEIGTKAYNMILDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVL 329
Query: 1025 LYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAGY 1204
+ L +R+T+ A LF RM E+G P+ TY +IK+LY R +G E+ KM AGY
Sbjct: 330 INNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIKSLYQAARIGEGDEMIDKMKSAGY 389
Query: 1205 TGTL--GFYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEARA 1378
+ +L Y + IL R EHA+ VF MK G+ P K Y +L+ ++ ++ RA
Sbjct: 390 SESLTKKEYYGFLKILCGIERLEHAMSVFKNMKANGIKPGIKTYDLLMGKMCANNQLTRA 449
Query: 1379 EQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXXRGPTIAEMKKIKIKRDTQKRLS 1558
L+ EA K + ++ + T+ E K +R Q +S
Sbjct: 450 NGLYKEAAKKGIAVSPKEYRVDPRFLKKKTKEVDSNVKKRETLPEKTARKRRRLKQINMS 509
Query: 1559 YVRKPKKLSTRRI 1597
+V+KP RR+
Sbjct: 510 FVKKPHNKMRRRM 522
>ref|XP_003630353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524375|gb|AET04829.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 620
Score = 190 bits (482), Expect = 2e-45
Identities = 138/450 (30%), Positives = 214/450 (47%), Gaps = 11/450 (2%)
Frame = +2
Query: 263 NKDVSFIELKNTLVNSKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELF 442
+ D S + + L S + +P ++ L+ L E G+ L + W P+ E
Sbjct: 92 DSDPSSVTQRLNLSFSHITPTPNLILETLN-LSLEAGRNVLGFHQWLASNPKFTHTDETL 150
Query: 443 NSFAFWFSKVDDYRSVEYMLEKNSDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMI 622
+ F +F + D+++ + +L + KT V L+ +AV+
Sbjct: 151 SYFVDYFGRRKDFKATDKILSGGGGGQ--------KTLLSAVDRLVRAGRQSQAVQ---- 198
Query: 623 LFNRME-EYGMERTPEAKNFLVKHLCDGGYGAETEELVKRYADRFYPDEQITSLIVRGYC 799
F RME +YG++R + +V+ LC GY + E++ A F+PDE+I L+V GYC
Sbjct: 199 FFERMEKDYGLKRDRSSMKVVVEKLCLKGYASYAEKMTTDLAKEFFPDEEICDLLVAGYC 258
Query: 800 RSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEM 979
GK+ +EARR+ EM + AYNA+L VCK+C +++PF + E K+ EM
Sbjct: 259 IDGKI---EEARRLAGEMYRGGFELGVRAYNAMLDCVCKMCREKDPFQLHSESKKVLVEM 315
Query: 980 KAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRT 1159
+ G+ N TFN+ + +RKT A LF+ M ++ +P + T+ +IK+LY R
Sbjct: 316 DSHGVPRNLETFNVLITNFCKIRKTNDALGLFNFMRQWRCNPNETTFLVLIKSLYQAARL 375
Query: 1160 EDGHELRQKMYEAGYTGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYS 1333
E+G + M AGY L Y + IL R HALK+F MK G P K Y
Sbjct: 376 EEGDAMIDGMKSAGYGAFLDKKAYFDFLTILCGIERINHALKIFTMMKADGCEPGVKTYD 435
Query: 1334 ILVRRLWMDDDEARAEQLFDEA--------LKDHVFTPDMRQKIMXXXXXXXXXXXXXXX 1489
+L+++L D +A LF+EA LK+HV P +K
Sbjct: 436 LLMKKLGAHDRVDKANALFNEARSRGLDVTLKEHVVDPRFSKK--------KEKKAVKAE 487
Query: 1490 XRGPTIAEMKKIKIKRDTQKRLSYVRKPKK 1579
+ T+ E K +R Q RLS+V+KPKK
Sbjct: 488 KKRETLPEKMARKRRRLKQIRLSFVKKPKK 517
>gb|AFK45023.1| unknown [Medicago truncatula]
Length = 521
Score = 190 bits (482), Expect = 2e-45
Identities = 138/450 (30%), Positives = 214/450 (47%), Gaps = 11/450 (2%)
Frame = +2
Query: 263 NKDVSFIELKNTLVNSKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELF 442
+ D S + + L S + +P ++ L+ L E G+ L + W P+ E
Sbjct: 92 DSDPSSVTQRLNLSFSHITPTPNLILETLN-LSLEAGRNVLGFHQWLASNPKFTHTDETL 150
Query: 443 NSFAFWFSKVDDYRSVEYMLEKNSDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMI 622
+ F +F + D+++ + +L + KT V L+ +AV+
Sbjct: 151 SYFVDYFGRRKDFKATDKILSGGGGGQ--------KTLLSAVDRLVRAGRQSQAVQ---- 198
Query: 623 LFNRME-EYGMERTPEAKNFLVKHLCDGGYGAETEELVKRYADRFYPDEQITSLIVRGYC 799
F RME +YG++R + +V+ LC GY + E++ A F+PDE+I L+V GYC
Sbjct: 199 FFERMEKDYGLKRDRSSMKVVVEKLCLKGYASYAEKMTTDLAKEFFPDEEICDLLVAGYC 258
Query: 800 RSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEM 979
GK+ +EARR+ EM + AYNA+L VCK+C +++PF + E K+ EM
Sbjct: 259 IDGKI---EEARRLAGEMYRGGFELGVRAYNAMLDCVCKMCREKDPFQLHSESKKVLVEM 315
Query: 980 KAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRT 1159
+ G+ N TFN+ + +RKT A LF+ M ++ +P + T+ +IK+LY R
Sbjct: 316 DSHGVPRNLETFNVLITNFCKIRKTNDALGLFNFMRQWRCNPNETTFLVLIKSLYQAARL 375
Query: 1160 EDGHELRQKMYEAGYTGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYS 1333
E+G + M AGY L Y + IL R HALK+F MK G P K Y
Sbjct: 376 EEGDAMIDGMKSAGYGAFLDKKAYFDFLTILCGIERINHALKIFTMMKADGCEPGVKTYD 435
Query: 1334 ILVRRLWMDDDEARAEQLFDEA--------LKDHVFTPDMRQKIMXXXXXXXXXXXXXXX 1489
+L+++L D +A LF+EA LK+HV P +K
Sbjct: 436 LLMKKLGAHDRVDKANALFNEARSRGLDVTLKEHVVDPRFSKK--------KEKKAVKAE 487
Query: 1490 XRGPTIAEMKKIKIKRDTQKRLSYVRKPKK 1579
+ T+ E K +R Q RLS+V+KPKK
Sbjct: 488 KKRETLPEKMARKRRRLKQIRLSFVKKPKK 517
>gb|ESW16823.1| hypothetical protein PHAVU_007G187600g [Phaseolus vulgaris]
Length = 505
Score = 189 bits (481), Expect = 3e-45
Identities = 138/459 (30%), Positives = 223/459 (48%), Gaps = 11/459 (2%)
Frame = +2
Query: 248 IIELVNKDVSFIELKNTLVNSKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKP 427
+++ ++ D + + L S + +P ++ L+ L P+ G+ L + W + P+
Sbjct: 71 LLKELDSDPLSVSQRLHLSFSHITPTPNLILQTLN-LSPQAGRTVLGFHQWLSSNPQFTH 129
Query: 428 NLELFNSFAFWFSKVDDYRSVEYMLEKNSDKRENALELDGKTFECIVKGLIVGSGTIKAV 607
+ F +F + D+++ +L A KT E + L+ +AV
Sbjct: 130 TDHTLSYFVDYFGRRKDFKATHDLLSAA------AAASGPKTLESAIDRLVRAGRPSQAV 183
Query: 608 RHAMILFNRME-EYGMERTPEAKNFLVKHLCDGGYGAETEELVKRYADRFYPDEQITSLI 784
+ F RME +YG++R + +V+ LC G+ + E++VK A F+PDE L+
Sbjct: 184 Q----FFERMERDYGLKRDRCSLKVVVEKLCSKGFASYAEKMVKELAREFFPDEATCDLL 239
Query: 785 VRGYCRSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCK 964
+RG+C GKL +EA+R+ EM + AYNA+L VCKLC +++ F + E K
Sbjct: 240 IRGWCVDGKL---EEAQRLAGEMYRGGFELGVGAYNAMLDCVCKLCREKDLFRLDSEAEK 296
Query: 965 LFDEMKAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALY 1144
+ EM+ G+ N TFN+ + L +RKT+ A LF M E+G SP + T+ +I++LY
Sbjct: 297 VLVEMEYRGVPRNVETFNVLITNLCKIRKTEDALNLFSSMGEWGCSPNESTFLVLIRSLY 356
Query: 1145 YQCRTEDGHELRQKMYEAGYTGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPH 1318
R E+G E+ +M AGY L Y + IL R +HAL VF MK G VP
Sbjct: 357 QAARLEEGDEMIDRMRSAGYGEFLDKKAYYQFLKILCGIERIDHALSVFAMMKADGCVPG 416
Query: 1319 KKIYSILVRRLWMDDDEARAEQLFDEA--------LKDHVFTPDMRQKIMXXXXXXXXXX 1474
+ Y +L+ +L + RA LF+EA LKD+ P ++K
Sbjct: 417 VQTYDLLMGKLGAHNRIDRANALFNEAKTRGLPVILKDYAVDPRYQKK----------KR 466
Query: 1475 XXXXXXRGPTIAEMKKIKIKRDTQKRLSYVRKPKKLSTR 1591
+ T+ E K +R Q RLS+V+KP++ R
Sbjct: 467 VVKAVKKRETLPEKMARKRRRLNQIRLSFVKKPQRAMGR 505
>ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Cucumis sativus]
gi|449477122|ref|XP_004154936.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Cucumis sativus]
Length = 522
Score = 187 bits (474), Expect = 2e-44
Identities = 134/428 (31%), Positives = 209/428 (48%), Gaps = 4/428 (0%)
Frame = +2
Query: 308 SKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELFNSFAFWFSKVDDYRS 487
S +K +P+ + + L+ L E G+ L W P+ E + F +F + D+ +
Sbjct: 106 SHVKPNPELVRNTLN-LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNA 164
Query: 488 VEYMLEKNSDKRENALELDG-KTFECIVKGLIVGSGTIKAVRHAMILFNRME-EYGMERT 661
V+ +L K L ++G KT + + K + F ME YG++R
Sbjct: 165 VQEVLAKG-------LGINGPKTLKSSIHRFARAGRPTKLIS----FFETMETNYGLKRD 213
Query: 662 PEAKNFLVKHLCDGGYGAETEELVKRYADRFYPDEQITSLIVRGYCRSGKLGNYDEARRV 841
E+ +V+ LC+ G+G+ E++VK A+ F+PDE I +++G+C + KL DEA+R+
Sbjct: 214 KESLRMVVEKLCENGFGSHAEKMVKDLANEFFPDEAICDTLIKGWCVNEKL---DEAKRL 270
Query: 842 MKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEMKAVGITPNAMTFNI 1021
EM + AYNALL VCKLC ++PF + E ++ EM G+ N TFN+
Sbjct: 271 AGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETFNV 330
Query: 1022 ALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRTEDGHELRQKMYEAG 1201
+ L +R+T A LFHRM E+G P T+ +I++LY RT +G E+ +M G
Sbjct: 331 LINNLCKIRRTTDAVNLFHRMGEWGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVG 390
Query: 1202 YTGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYSILVRRLWMDDDEAR 1375
Y L Y + IL R +HAL VF MK+ G P K Y +L+ +L + +
Sbjct: 391 YGDALDKKAYYEFMNILCGIERIDHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDK 450
Query: 1376 AEQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXXRGPTIAEMKKIKIKRDTQKRL 1555
A LF+EA K V P + + T+ E K +R Q RL
Sbjct: 451 ANSLFNEAQKRGV--PVTPKAYQVDPKYVKKPKDKKVAKKRETLPEKMARKRRRLKQIRL 508
Query: 1556 SYVRKPKK 1579
S+V+KP++
Sbjct: 509 SFVKKPRR 516
>ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
mitochondrial-like [Glycine max]
Length = 509
Score = 186 bits (473), Expect = 3e-44
Identities = 131/446 (29%), Positives = 215/446 (48%), Gaps = 3/446 (0%)
Frame = +2
Query: 263 NKDVSFIELKNTLVNSKLKTSPKSLIHILSKLPPEVGQKALVLYNWATQLPECKPNLELF 442
+ D + + L S + +P ++ L+ L P+ G+ L + W + P+ +
Sbjct: 79 DSDALSVSQRLNLSFSHITPTPNLILQTLN-LSPQAGRTVLGFHQWLSSNPQFSHTDDTL 137
Query: 443 NSFAFWFSKVDDYRSVEYMLEKNSDKRENALELDGKTFECIVKGLIVGSGTIKAVRHAMI 622
+ F +F + D+++ +L S KT + L+ + +AV+
Sbjct: 138 SYFVDYFGRRKDFKATHDVLAAASPAA------GPKTLASAIDRLVRAGRSSQAVQ---- 187
Query: 623 LFNRME-EYGMERTPEAKNFLVKHLCDGGYGAETEELVKRYADRFYPDEQITSLIVRGYC 799
F RME +YG++R ++ +V+ LC G+ + E++VK A F+PDE +++RG+C
Sbjct: 188 FFERMERDYGLKRDRDSLKVVVEKLCSEGFASYAEKMVKDLAREFFPDEATCDMLIRGWC 247
Query: 800 RSGKLGNYDEARRVMKEMAIAQLKPTYVAYNALLKMVCKLCIDREPFLMAQEVCKLFDEM 979
GKL DEA+R+ EM AYNA+L VCKLC +++PF + E K+ EM
Sbjct: 248 IDGKL---DEAQRLAGEMYRGGFDLGVGAYNAMLDCVCKLCREKDPFQLHSEAEKVLVEM 304
Query: 980 KAVGITPNAMTFNIALYYLGLVRKTQVAFELFHRMEEFGVSPEQFTYETMIKALYYQCRT 1159
+ G+ N TFN+ + L +RKT+ A L H M E+G P + T+ +I++LY R
Sbjct: 305 EYRGVPRNTETFNVLITNLCKIRKTEDALGLLHSMGEWGCYPNETTFLVLIRSLYQAARL 364
Query: 1160 EDGHELRQKMYEAGYTGTLG--FYSASIVILTAKSRKEHALKVFWAMKEKGVVPHKKIYS 1333
E+G E+ +M AG+ L Y + IL R +HAL VF MK+ G P Y
Sbjct: 365 EEGDEMIDRMRSAGFGEFLDKKAYYQFLKILCGIERVDHALSVFAMMKDDGCEPGVITYD 424
Query: 1334 ILVRRLWMDDDEARAEQLFDEALKDHVFTPDMRQKIMXXXXXXXXXXXXXXXXRGPTIAE 1513
+L+ +L + + LF+EA K +++ + + T+ E
Sbjct: 425 LLMGKLGAHNRIDKVNALFNEA-KSRGLPVILKEYAVDPRYLKKKKKVVKGVKKRETLPE 483
Query: 1514 MKKIKIKRDTQKRLSYVRKPKKLSTR 1591
K R Q RLSYV+KPK++ R
Sbjct: 484 KMARKRSRLKQIRLSYVKKPKRVMGR 509