BLASTX nr result

ID: Ephedra26_contig00001267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00001267
         (530 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006846966.1| hypothetical protein AMTR_s00017p00069600 [A...    64   2e-08
gb|ABK25845.1| unknown [Picea sitchensis]                              59   7e-07
ref|XP_006351183.1| PREDICTED: uncharacterized protein LOC102597...    57   3e-06
gb|ABR18400.1| unknown [Picea sitchensis]                              57   3e-06
ref|XP_004250357.1| PREDICTED: uncharacterized protein LOC101259...    56   4e-06

>ref|XP_006846966.1| hypothetical protein AMTR_s00017p00069600 [Amborella trichopoda]
           gi|548849995|gb|ERN08547.1| hypothetical protein
           AMTR_s00017p00069600 [Amborella trichopoda]
          Length = 105

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/54 (53%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
 Frame = +3

Query: 6   ELTNSMMSSRVVPQPT-QISQGPQGSPRLIRCHAVRRDIFRDWHFDDASDEN*R 164
           ++ N+MM+S+V PQP    +QG  G+PRL+R HAVRRD+FRDW+FD+  +E  R
Sbjct: 48  DMANTMMTSKVAPQPPISETQGLTGAPRLVRSHAVRRDLFRDWNFDNILEEGQR 101


>gb|ABK25845.1| unknown [Picea sitchensis]
          Length = 95

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = +3

Query: 12  TNSMMSSRVVPQPTQISQGPQGSPRLIRCHAVRRDIFRDWHFDDASDE 155
           TNS MSS+V PQPT        +PRL+RC A+RRDIFRDWHF++ + E
Sbjct: 49  TNSTMSSKVAPQPTV-------TPRLLRCPALRRDIFRDWHFEEMAIE 89


>ref|XP_006351183.1| PREDICTED: uncharacterized protein LOC102597749 isoform X1 [Solanum
           tuberosum] gi|565369118|ref|XP_006351184.1| PREDICTED:
           uncharacterized protein LOC102597749 isoform X2 [Solanum
           tuberosum]
          Length = 99

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = +3

Query: 3   PELTNSMMSSRVVPQPTQISQGPQGSPRLIRCHAVRRDIFRDWHFDDASDE 155
           P     + +S+V PQP+  S G  G PRL+R  AVRRDI RDW+FD+ + E
Sbjct: 48  PAANGGITTSKVTPQPSDTSNGITGPPRLVRSRAVRRDIVRDWNFDEVALE 98


>gb|ABR18400.1| unknown [Picea sitchensis]
          Length = 115

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 12/64 (18%)
 Frame = +3

Query: 3   PELTNSMMSSRVVPQP------------TQISQGPQGSPRLIRCHAVRRDIFRDWHFDDA 146
           P    + + +RV P P            +  +Q P  +P+L+RCHAVRRDIFRDWHF+D 
Sbjct: 46  PPAAENTLRTRVAPVPPSGGGISNNITGSSSNQAPDSNPKLMRCHAVRRDIFRDWHFEDF 105

Query: 147 SDEN 158
            + N
Sbjct: 106 PEGN 109


>ref|XP_004250357.1| PREDICTED: uncharacterized protein LOC101259108 [Solanum
           lycopersicum]
          Length = 99

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/47 (51%), Positives = 31/47 (65%)
 Frame = +3

Query: 3   PELTNSMMSSRVVPQPTQISQGPQGSPRLIRCHAVRRDIFRDWHFDD 143
           P     + +S+V PQPT  + G  G PRL+R  AVRRDI RDW+FD+
Sbjct: 48  PAANGGITTSKVTPQPTDTNNGITGPPRLVRSRAVRRDIVRDWNFDE 94


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