BLASTX nr result

ID: Ephedra26_contig00001147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00001147
         (501 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24608.1| unknown [Picea sitchensis]                              70   2e-10
ref|XP_006488736.1| PREDICTED: rRNA-processing protein fcf2-like...    56   4e-06
ref|XP_006419236.1| hypothetical protein CICLE_v10005920mg [Citr...    56   4e-06
ref|XP_004140538.1| PREDICTED: rRNA-processing protein fcf2-like...    56   6e-06
ref|XP_002519321.1| conserved hypothetical protein [Ricinus comm...    56   6e-06

>gb|ABK24608.1| unknown [Picea sitchensis]
          Length = 347

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 37/46 (80%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
 Frame = -1

Query: 501 EFYS-RLTKKERKPTIADELLSDRDFNQYRKRKHLEIEKQYNPPRK 367
           EFYS RLTKKERKPTIADELLSD  F QYRKRKHLEIE+  NP  K
Sbjct: 288 EFYSGRLTKKERKPTIADELLSDSAFQQYRKRKHLEIERVNNPVGK 333


>ref|XP_006488736.1| PREDICTED: rRNA-processing protein fcf2-like [Citrus sinensis]
          Length = 202

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/41 (70%), Positives = 30/41 (73%)
 Frame = -1

Query: 498 FYSRLTKKERKPTIADELLSDRDFNQYRKRKHLEIEKQYNP 376
           F SRLTKKERK T+ADELLSD    QYRKRK  EIE Q  P
Sbjct: 140 FSSRLTKKERKATLADELLSDPTLGQYRKRKVREIESQNRP 180


>ref|XP_006419236.1| hypothetical protein CICLE_v10005920mg [Citrus clementina]
           gi|557521109|gb|ESR32476.1| hypothetical protein
           CICLE_v10005920mg [Citrus clementina]
          Length = 202

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/41 (70%), Positives = 30/41 (73%)
 Frame = -1

Query: 498 FYSRLTKKERKPTIADELLSDRDFNQYRKRKHLEIEKQYNP 376
           F SRLTKKERK T+ADELLSD    QYRKRK  EIE Q  P
Sbjct: 140 FSSRLTKKERKATLADELLSDPTLGQYRKRKVREIESQNRP 180


>ref|XP_004140538.1| PREDICTED: rRNA-processing protein fcf2-like [Cucumis sativus]
           gi|449523942|ref|XP_004168982.1| PREDICTED:
           rRNA-processing protein fcf2-like [Cucumis sativus]
          Length = 197

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/41 (68%), Positives = 31/41 (75%)
 Frame = -1

Query: 498 FYSRLTKKERKPTIADELLSDRDFNQYRKRKHLEIEKQYNP 376
           F  RLTKKERK T+ADELLSD+   QYRKRK  EIE+Q  P
Sbjct: 135 FSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRP 175


>ref|XP_002519321.1| conserved hypothetical protein [Ricinus communis]
           gi|223541636|gb|EEF43185.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 200

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = -1

Query: 498 FYSRLTKKERKPTIADELLSDRDFNQYRKRKHLEIEKQYNPPRKSRF 358
           F  RLTKKERKPT+A+E+LSDR    YRKRK  EIE+Q  P    R+
Sbjct: 138 FSGRLTKKERKPTLAEEILSDRTLAAYRKRKVREIEEQDGPGGNERW 184


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