BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00000960
         (2313 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006838283.1| hypothetical protein AMTR_s00103p00101630 [A...   392   e-106
ref|XP_006482851.1| PREDICTED: DNA topoisomerase 2-like [Citrus ...   377   e-101
ref|XP_006439079.1| hypothetical protein CICLE_v10030505mg [Citr...   377   e-101
gb|EOY18138.1| DNA topoisomerase 2 isoform 2 [Theobroma cacao]        374   e-100
ref|XP_006439078.1| hypothetical protein CICLE_v10030505mg [Citr...   372   e-100
ref|XP_001769043.1| predicted protein [Physcomitrella patens] gi...   372   e-100
ref|XP_001758663.1| predicted protein [Physcomitrella patens] gi...   371   e-100
gb|EOY18139.1| Topoisomerase II isoform 3 [Theobroma cacao]           371   e-100
gb|EOY18137.1| DNA topoisomerase 2 isoform 1 [Theobroma cacao]        371   e-100
ref|XP_002988023.1| hypothetical protein SELMODRAFT_127267 [Sela...   367   1e-98
emb|CAJ44361.1| putative DNA topoisomerase II [Malus domestica]       366   2e-98
gb|EMJ21781.1| hypothetical protein PRUPE_ppa000202mg [Prunus pe...   365   4e-98
ref|XP_002972906.1| hypothetical protein SELMODRAFT_98330 [Selag...   365   4e-98
ref|XP_002994651.1| hypothetical protein SELMODRAFT_138946 [Sela...   365   4e-98
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   365   6e-98
gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...   357   1e-95
ref|XP_004308680.1| PREDICTED: DNA topoisomerase 2-like [Fragari...   355   6e-95
ref|XP_002298421.2| DNA topoisomerase family protein [Populus tr...   350   2e-93
ref|XP_006345427.1| PREDICTED: DNA topoisomerase 2-like [Solanum...   348   6e-93
ref|XP_004229644.1| PREDICTED: DNA topoisomerase 2-like [Solanum...   348   6e-93

>ref|XP_006838283.1| hypothetical protein AMTR_s00103p00101630 [Amborella trichopoda]
            gi|548840751|gb|ERN00852.1| hypothetical protein
            AMTR_s00103p00101630 [Amborella trichopoda]
          Length = 1505

 Score =  392 bits (1006), Expect = e-106
 Identities = 189/325 (58%), Positives = 251/325 (77%), Gaps = 1/325 (0%)
 Frame = -1

Query: 2313 DPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMT 2134
            +PWYKGFKGTIE +ATK+ GV YT++GI+EE+N TTLRI ELPIR+WT+DYK +LE L T
Sbjct: 881  EPWYKGFKGTIEKSATKEGGVGYTVSGIVEEINETTLRITELPIRRWTEDYKVYLESLRT 940

Query: 2133 GNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFD 1954
            G++K KEPFI DYKE++T+ RV+F+V L EENM I++QEGL+K F+LTTTISTSNMHLF+
Sbjct: 941  GSEKTKEPFIVDYKEHNTDTRVHFDVLLPEENMKISQQEGLMKMFKLTTTISTSNMHLFN 1000

Query: 1953 RRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEII 1774
             +G+I+K+DTPEQIL+EFF +R ++Y KRKK  L +LE EL++L+NK RFILGVVNGEI+
Sbjct: 1001 AKGVIKKYDTPEQILEEFFHLRLDYYGKRKKVLLDNLELELLKLDNKARFILGVVNGEIV 1060

Query: 1773 VNNRKRKELAAELRQKGFTPISKSRKELEEAATAGAQVGETNEDDPSLDDNN-DLKDYEY 1597
            V+ RKR +L  ELR KGFTP  K  K +E A      V E  E+ P +DD   +  DY+Y
Sbjct: 1061 VSKRKRADLVLELRDKGFTPFPKKSKNVEAALAGATPVDEEGEESPEVDDRGINASDYDY 1120

Query: 1596 LMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELDNLERIEAS 1417
            L+SM IG+LT+E+VQ L  E+D+ E +V EL+  TP++LW KDLD F+ +LD     EA 
Sbjct: 1121 LLSMAIGTLTIEKVQELCAEKDKLEHDVKELRGLTPKALWIKDLDAFLAQLDAEAVQEAK 1180

Query: 1416 EDEKELNSMNAEAARVFKLVPKHQR 1342
            +DE ELN+M ++AA++F+ V K+ R
Sbjct: 1181 DDEYELNNMVSDAAKIFRQVGKNPR 1205


>ref|XP_006482851.1| PREDICTED: DNA topoisomerase 2-like [Citrus sinensis]
          Length = 1456

 Score =  377 bits (968), Expect = e-101
 Identities = 191/328 (58%), Positives = 246/328 (75%), Gaps = 5/328 (1%)
 Frame = -1

Query: 2310 PWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTG 2131
            PWY+GF+GTIE TA+K++GVTYT+TGIIEEVN TTLRI ELPIR+WTQDY+EFLE ++  
Sbjct: 869  PWYRGFRGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQ 928

Query: 2130 NDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFDR 1951
            ND     FIR +++YS +  V FEVFLSEE+M   +QEGLLKKF+LTTTISTSNMHLFD 
Sbjct: 929  NDS----FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDS 984

Query: 1950 RGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEIIV 1771
            +G+I+K+DTPEQIL+EFF IR EFYEKRKK +L++LE EL++LENKVRFILGVVNGEI+V
Sbjct: 985  KGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVV 1044

Query: 1770 NNRKRKELAAELRQKGFTPISKSRKELEEAATAGAQVGETNEDDPSLDDNNDLKDYEYLM 1591
            NNRKR +L  ELRQKGFTP  K+ K +E          E +E++P + +     DY+YL+
Sbjct: 1045 NNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLL 1104

Query: 1590 SMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELDNLERIEASED 1411
            SM IG+LTLE+VQ LL +RD+   EV +L+K TP SLW KDLD   ++LD L++ +A  +
Sbjct: 1105 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAE 1164

Query: 1410 EKEL-----NSMNAEAARVFKLVPKHQR 1342
            E+ +      + +A    V K  PK+ R
Sbjct: 1165 EERMKIKGNGNSDAGPKIVAKRAPKNAR 1192


>ref|XP_006439079.1| hypothetical protein CICLE_v10030505mg [Citrus clementina]
            gi|557541275|gb|ESR52319.1| hypothetical protein
            CICLE_v10030505mg [Citrus clementina]
          Length = 1456

 Score =  377 bits (968), Expect = e-101
 Identities = 191/328 (58%), Positives = 246/328 (75%), Gaps = 5/328 (1%)
 Frame = -1

Query: 2310 PWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTG 2131
            PWY+GF+GTIE TA+K++GVTYT+TGIIEEVN TTLRI ELPIR+WTQDY+EFLE ++  
Sbjct: 869  PWYRGFRGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQ 928

Query: 2130 NDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFDR 1951
            ND     FIR +++YS +  V FEVFLSEE+M   +QEGLLKKF+LTTTISTSNMHLFD 
Sbjct: 929  NDS----FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDS 984

Query: 1950 RGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEIIV 1771
            +G+I+K+DTPEQIL+EFF IR EFYEKRKK +L++LE EL++LENKVRFILGVVNGEI+V
Sbjct: 985  KGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVV 1044

Query: 1770 NNRKRKELAAELRQKGFTPISKSRKELEEAATAGAQVGETNEDDPSLDDNNDLKDYEYLM 1591
            NNRKR +L  ELRQKGFTP  K+ K +E          E +E++P + +     DY+YL+
Sbjct: 1045 NNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLL 1104

Query: 1590 SMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELDNLERIEASED 1411
            SM IG+LTLE+VQ LL +RD+   EV +L+K TP SLW KDLD   ++LD L++ +A  +
Sbjct: 1105 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAE 1164

Query: 1410 EKEL-----NSMNAEAARVFKLVPKHQR 1342
            E+ +      + +A    V K  PK+ R
Sbjct: 1165 EERMKIKGNGNSDAGPKIVAKRAPKNAR 1192


>gb|EOY18138.1| DNA topoisomerase 2 isoform 2 [Theobroma cacao]
          Length = 1285

 Score =  374 bits (960), Expect = e-100
 Identities = 209/410 (50%), Positives = 267/410 (65%), Gaps = 3/410 (0%)
 Frame = -1

Query: 2310 PWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTG 2131
            PWY+GFKG IE TA+K++GVTYT+TGIIEEV+ TTLRI ELP+R+WTQDY+EFLE ++TG
Sbjct: 681  PWYRGFKGNIEKTASKEAGVTYTITGIIEEVDETTLRITELPVRRWTQDYREFLESIITG 740

Query: 2130 NDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFDR 1951
            ND    PFI+++++YS +  V FEV L+EENM +A+QEGLLKKF+LTTTISTSNMHLFD 
Sbjct: 741  ND----PFIKEFRQYSDDTTVEFEVILTEENMMVAKQEGLLKKFKLTTTISTSNMHLFDS 796

Query: 1950 RGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEIIV 1771
            +G+I+K+DTPEQIL+EFF +RFEFYEKRKK  L +LE EL+++ENKVRFILGVV GEIIV
Sbjct: 797  KGMIKKYDTPEQILEEFFHLRFEFYEKRKKLLLDNLEMELLKMENKVRFILGVVKGEIIV 856

Query: 1770 NNRKRKELAAELRQKGFTPISKSRKELEEAATAGA--QVGETNEDDPSLDDNNDLKDYEY 1597
            NNRKR +L  EL+ KGFTP  K  K + E A AGA     ET E+           DY+Y
Sbjct: 857  NNRKRADLFLELQTKGFTPFPKKAKTV-EVAVAGATDDTEETEENSEVSAKGLQASDYDY 915

Query: 1596 LMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELDNLERIEAS 1417
            L+SM IGSLTLE+VQ L  +RD+ + EV +L+K TP+SLW KDLD   ++LD  ++   +
Sbjct: 916  LLSMAIGSLTLEKVQELCADRDKLQQEVEDLRKATPKSLWLKDLDNLEIQLDEQDKAAQA 975

Query: 1416 EDEKELNSMNAEAA-RVFKLVPKHQRTIKXXXXXXXXXXXXXXSTTQPSSSLATANTQPD 1240
            E+  +L     EA  R  +  PK  R I                ++  SS++ TA T P 
Sbjct: 976  EEAAKLVKGRGEAGKRAQRQAPKIPRKINKKEKNAETVTETTDISS--SSAMETAETAPA 1033

Query: 1239 VXXXXXXXXXXXXXXXXKMXXXXXXXXXXXIGLQQNRLAAYNEDSSPDGS 1090
                                          +   + RLA YN DSSPD S
Sbjct: 1034 AVKPKGRGGSRKAKKDDSDDDDDEDFGIPDL---RERLAKYNLDSSPDHS 1080


>ref|XP_006439078.1| hypothetical protein CICLE_v10030505mg [Citrus clementina]
            gi|557541274|gb|ESR52318.1| hypothetical protein
            CICLE_v10030505mg [Citrus clementina]
          Length = 1455

 Score =  372 bits (956), Expect = e-100
 Identities = 191/328 (58%), Positives = 246/328 (75%), Gaps = 5/328 (1%)
 Frame = -1

Query: 2310 PWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTG 2131
            PWY+GF+GTIE TA+K++GVTYT+TGIIEEVN TTLRI ELPIR+WTQDY+EFLE ++  
Sbjct: 869  PWYRGFRGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQ 928

Query: 2130 NDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFDR 1951
            ND     FIR +++YS +  V FEVFLSEE+M   +QEGLLKKF+LTTTISTSNMHLFD 
Sbjct: 929  NDS----FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDS 984

Query: 1950 RGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEIIV 1771
            +G+I+K+DTPEQIL+EFF IR EFYEKRKK +L++LE EL++LENKVRFILGVVNGEI+V
Sbjct: 985  KGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVV 1044

Query: 1770 NNRKRKELAAELRQKGFTPISKSRKELEEAATAGAQVGETNEDDPSLDDNNDLKDYEYLM 1591
            NNRKR +L  ELRQKGFTP  K+ K +E          E +E++P + +     DY+YL+
Sbjct: 1045 NNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLL 1104

Query: 1590 SMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELDNLERIEASED 1411
            SM IG+LTLE+VQ LL +RD+   EV +L+K TP SLW KDLD   ++LD L++ +A  +
Sbjct: 1105 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD-LDKSDARAE 1163

Query: 1410 EKEL-----NSMNAEAARVFKLVPKHQR 1342
            E+ +      + +A    V K  PK+ R
Sbjct: 1164 EERMKIKGNGNSDAGPKIVAKRAPKNAR 1191


>ref|XP_001769043.1| predicted protein [Physcomitrella patens] gi|162679677|gb|EDQ66121.1|
            predicted protein [Physcomitrella patens]
          Length = 1172

 Score =  372 bits (954), Expect = e-100
 Identities = 180/290 (62%), Positives = 232/290 (80%)
 Frame = -1

Query: 2310 PWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTG 2131
            PWYKGFKG+IE +ATKDSG TYT+TG I++++ TT++I ELP+RKWTQDYKEFL+V+MT 
Sbjct: 873  PWYKGFKGSIECSATKDSGFTYTITGAIDQIDETTIKISELPVRKWTQDYKEFLDVMMTP 932

Query: 2130 NDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFDR 1951
            +DK KEPFI+D++E++T+ +V+FE+ LSEENM IA  EGL+KKF+LTTTISTSNMHLFD 
Sbjct: 933  SDKNKEPFIKDFREHNTDTKVHFELSLSEENMAIALAEGLVKKFKLTTTISTSNMHLFDN 992

Query: 1950 RGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEIIV 1771
            +GII+K+DTPEQIL+EFF IR + Y KRK  +LQ+LE+EL +++NKVRFILGVV GEIIV
Sbjct: 993  KGIIKKYDTPEQILEEFFHIRLDMYVKRKAVQLQNLEYELHKVDNKVRFILGVVKGEIIV 1052

Query: 1770 NNRKRKELAAELRQKGFTPISKSRKELEEAATAGAQVGETNEDDPSLDDNNDLKDYEYLM 1591
            NNRKR +L A+L++KGFTP  K  K  +        + E +E D  +       DYEYL+
Sbjct: 1053 NNRKRADLLADLQKKGFTPFPKKSKSSDPPVVGADPLPEDDEQDEKVKGIR-AADYEYLL 1111

Query: 1590 SMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELD 1441
            SMPIG+LT E+VQ L  +RD+ EGEV ELKK TP +LW KDLDEF+++LD
Sbjct: 1112 SMPIGTLTFEKVQQLRGQRDKMEGEVEELKKATPEALWIKDLDEFLVKLD 1161


>ref|XP_001758663.1| predicted protein [Physcomitrella patens] gi|162690273|gb|EDQ76641.1|
            predicted protein [Physcomitrella patens]
          Length = 1238

 Score =  371 bits (953), Expect = e-100
 Identities = 185/316 (58%), Positives = 238/316 (75%)
 Frame = -1

Query: 2310 PWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTG 2131
            PWYK F GTIE +ATKD G+TYT+TG IE+++ TT++ILELP+RKWTQDYKEFL+ LMT 
Sbjct: 874  PWYKSFMGTIECSATKDIGLTYTITGTIEQIDETTIKILELPVRKWTQDYKEFLDALMTP 933

Query: 2130 NDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFDR 1951
            +DK KEPFI+D++E++T+ +V+FE+ LSEENM IA  EGL+KKF+LTTTISTSNMHLFD 
Sbjct: 934  SDKNKEPFIKDFREHNTDTKVHFELTLSEENMAIALAEGLVKKFKLTTTISTSNMHLFDA 993

Query: 1950 RGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEIIV 1771
            +GII+K+DTPEQIL+EFF IR + Y KRK  +LQ+L++ELV+++NKVRFILGVV GEIIV
Sbjct: 994  KGIIKKYDTPEQILEEFFHIRLDLYVKRKAVQLQNLQYELVKVDNKVRFILGVVKGEIIV 1053

Query: 1770 NNRKRKELAAELRQKGFTPISKSRKELEEAATAGAQVGETNEDDPSLDDNNDLKDYEYLM 1591
            NNRKR +L +EL+ KGF P  K  K  +        + E NE D  +     + DY+YL+
Sbjct: 1054 NNRKRIDLLSELQHKGFAPFPKKAKSPDPPVVGADPLPEDNEQDEKV-KGVKVADYDYLL 1112

Query: 1590 SMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELDNLERIEASED 1411
            SMPIGSLT E+VQ L  +RD+ E EV ELK+ TP +LW KDLDEF+++LD  E  EA + 
Sbjct: 1113 SMPIGSLTYEKVQQLRGQRDKMEEEVEELKRATPEALWIKDLDEFLVKLDAQEEQEAIDA 1172

Query: 1410 EKELNSMNAEAARVFK 1363
              E      E  + FK
Sbjct: 1173 VYEAKHSAKEGNQTFK 1188


>gb|EOY18139.1| Topoisomerase II isoform 3 [Theobroma cacao]
          Length = 1244

 Score =  371 bits (952), Expect = e-100
 Identities = 192/328 (58%), Positives = 244/328 (74%), Gaps = 3/328 (0%)
 Frame = -1

Query: 2310 PWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTG 2131
            PWY+GFKG IE TA+K++GVTYT+TGIIEEV+ TTLRI ELP+R+WTQDY+EFLE ++TG
Sbjct: 870  PWYRGFKGNIEKTASKEAGVTYTITGIIEEVDETTLRITELPVRRWTQDYREFLESIITG 929

Query: 2130 NDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFDR 1951
            ND    PFI+++++YS +  V FEV L+EENM +A+QEGLLKKF+LTTTISTSNMHLFD 
Sbjct: 930  ND----PFIKEFRQYSDDTTVEFEVILTEENMMVAKQEGLLKKFKLTTTISTSNMHLFDS 985

Query: 1950 RGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEIIV 1771
            +G+I+K+DTPEQIL+EFF +RFEFYEKRKK  L +LE EL+++ENKVRFILGVV GEIIV
Sbjct: 986  KGMIKKYDTPEQILEEFFHLRFEFYEKRKKLLLDNLEMELLKMENKVRFILGVVKGEIIV 1045

Query: 1770 NNRKRKELAAELRQKGFTPISKSRKELEEAATAGA--QVGETNEDDPSLDDNNDLKDYEY 1597
            NNRKR +L  EL+ KGFTP  K  K + E A AGA     ET E+           DY+Y
Sbjct: 1046 NNRKRADLFLELQTKGFTPFPKKAKTV-EVAVAGATDDTEETEENSEVSAKGLQASDYDY 1104

Query: 1596 LMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELDNLERIEAS 1417
            L+SM IGSLTLE+VQ L  +RD+ + EV +L+K TP+SLW KDLD   ++LD  ++   +
Sbjct: 1105 LLSMAIGSLTLEKVQELCADRDKLQQEVEDLRKATPKSLWLKDLDNLEIQLDEQDKAAQA 1164

Query: 1416 EDEKELNSMNAEAA-RVFKLVPKHQRTI 1336
            E+  +L     EA  R  +  PK  R I
Sbjct: 1165 EEAAKLVKGRGEAGKRAQRQAPKIPRKI 1192


>gb|EOY18137.1| DNA topoisomerase 2 isoform 1 [Theobroma cacao]
          Length = 1473

 Score =  371 bits (952), Expect = e-100
 Identities = 192/328 (58%), Positives = 244/328 (74%), Gaps = 3/328 (0%)
 Frame = -1

Query: 2310 PWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMTG 2131
            PWY+GFKG IE TA+K++GVTYT+TGIIEEV+ TTLRI ELP+R+WTQDY+EFLE ++TG
Sbjct: 870  PWYRGFKGNIEKTASKEAGVTYTITGIIEEVDETTLRITELPVRRWTQDYREFLESIITG 929

Query: 2130 NDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFDR 1951
            ND    PFI+++++YS +  V FEV L+EENM +A+QEGLLKKF+LTTTISTSNMHLFD 
Sbjct: 930  ND----PFIKEFRQYSDDTTVEFEVILTEENMMVAKQEGLLKKFKLTTTISTSNMHLFDS 985

Query: 1950 RGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEIIV 1771
            +G+I+K+DTPEQIL+EFF +RFEFYEKRKK  L +LE EL+++ENKVRFILGVV GEIIV
Sbjct: 986  KGMIKKYDTPEQILEEFFHLRFEFYEKRKKLLLDNLEMELLKMENKVRFILGVVKGEIIV 1045

Query: 1770 NNRKRKELAAELRQKGFTPISKSRKELEEAATAGA--QVGETNEDDPSLDDNNDLKDYEY 1597
            NNRKR +L  EL+ KGFTP  K  K + E A AGA     ET E+           DY+Y
Sbjct: 1046 NNRKRADLFLELQTKGFTPFPKKAKTV-EVAVAGATDDTEETEENSEVSAKGLQASDYDY 1104

Query: 1596 LMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELDNLERIEAS 1417
            L+SM IGSLTLE+VQ L  +RD+ + EV +L+K TP+SLW KDLD   ++LD  ++   +
Sbjct: 1105 LLSMAIGSLTLEKVQELCADRDKLQQEVEDLRKATPKSLWLKDLDNLEIQLDEQDKAAQA 1164

Query: 1416 EDEKELNSMNAEAA-RVFKLVPKHQRTI 1336
            E+  +L     EA  R  +  PK  R I
Sbjct: 1165 EEAAKLVKGRGEAGKRAQRQAPKIPRKI 1192


>ref|XP_002988023.1| hypothetical protein SELMODRAFT_127267 [Selaginella moellendorffii]
            gi|300144129|gb|EFJ10815.1| hypothetical protein
            SELMODRAFT_127267 [Selaginella moellendorffii]
          Length = 1151

 Score =  367 bits (942), Expect = 1e-98
 Identities = 177/290 (61%), Positives = 229/290 (78%)
 Frame = -1

Query: 2313 DPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMT 2134
            DPWYKGFKGTI  +ATK+SGV+YT+TGI+E+VN TT+R+LELPIRKWTQDYKEFLE L+ 
Sbjct: 860  DPWYKGFKGTIVKSATKESGVSYTVTGIVEQVNETTIRVLELPIRKWTQDYKEFLEALLC 919

Query: 2133 GNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFD 1954
            G +KIKEP I+DY+E++T+ RV+FE+ LSEE M  A  EGL KKF+L+TTISTSNM+LFD
Sbjct: 920  GTEKIKEPSIKDYREHNTDTRVHFEISLSEEKMAEALAEGLTKKFKLSTTISTSNMNLFD 979

Query: 1953 RRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEII 1774
            + G I+K+DTPEQIL++F+ IR E Y KRK+ ++++L++EL++L+NKVRFILGVV GEI+
Sbjct: 980  KDGHIRKYDTPEQILEDFYHIRLELYVKRKEVQVENLQYELLKLDNKVRFILGVVKGEIV 1039

Query: 1773 VNNRKRKELAAELRQKGFTPISKSRKELEEAATAGAQVGETNEDDPSLDDNNDLKDYEYL 1594
            VNNRKR EL  EL+ KGFTP  K  K  +     G       +D+  L+      DYEYL
Sbjct: 1040 VNNRKRAELLVELKTKGFTPFPKKAKASDLPVVGGDGSDVEADDEEKLNKGVRAGDYEYL 1099

Query: 1593 MSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILEL 1444
            +SMPIG+LTLE+VQ L +ERD+ EG+V ELKK TP+ LW+KDLD F+ +L
Sbjct: 1100 LSMPIGTLTLEKVQQLCNERDKLEGDVEELKKCTPKDLWEKDLDNFLEQL 1149


>emb|CAJ44361.1| putative DNA topoisomerase II [Malus domestica]
          Length = 1467

 Score =  366 bits (940), Expect = 2e-98
 Identities = 190/333 (57%), Positives = 244/333 (73%), Gaps = 6/333 (1%)
 Frame = -1

Query: 2313 DPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMT 2134
            DPWY+GF GTIE T  K+SGV+YT  GIIEEV+ T+LRI ELPIR+WTQDYKEFLE +  
Sbjct: 839  DPWYRGFTGTIEKTV-KESGVSYTACGIIEEVSETSLRISELPIRRWTQDYKEFLESISE 897

Query: 2133 GNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFD 1954
            GNDK K+PFI  + ++S ++ V   V L EE +  A+QEGLLKKF+LTT+ISTSNMHLFD
Sbjct: 898  GNDKAKDPFIEGFTQHSDHSTVDIIVHLREEKLMAAKQEGLLKKFKLTTSISTSNMHLFD 957

Query: 1953 RRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEII 1774
            R+G+I+K+DTPEQIL++FF +R EFYEKRKK  L+ LE EL++LENKVRFILGVVNGEII
Sbjct: 958  RKGVIKKYDTPEQILEDFFHLRLEFYEKRKKVLLEDLELELLKLENKVRFILGVVNGEII 1017

Query: 1773 VNNRKRKELAAELRQKGFTPISKSRKELEEAATAGAQVGETNED--DPSLDDNNDLKDYE 1600
            V+NRKR +L  EL+QKGFTP  K  K LE       +  E  E+  + +++    + DYE
Sbjct: 1018 VSNRKRADLFLELQQKGFTPFPKKTKALEPEVAGATENTEDAEENSEAAIEKGARISDYE 1077

Query: 1599 YLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELDNLERIEA 1420
            YL+SM IG+LT+ERVQ+LL +RD+   EV EL+K+TPRSLW KDLD   +ELD LE+ EA
Sbjct: 1078 YLISMAIGTLTIERVQALLADRDKANAEVDELRKSTPRSLWLKDLDALEMELDVLEKSEA 1137

Query: 1419 SEDEKELNS----MNAEAARVFKLVPKHQRTIK 1333
              +E +  +     N  A++  K  PK ++  K
Sbjct: 1138 LAEEAKKKARTQVKNVPASKASKQAPKPRKNTK 1170


>gb|EMJ21781.1| hypothetical protein PRUPE_ppa000202mg [Prunus persica]
          Length = 1471

 Score =  365 bits (938), Expect = 4e-98
 Identities = 212/422 (50%), Positives = 268/422 (63%), Gaps = 8/422 (1%)
 Frame = -1

Query: 2313 DPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMT 2134
            DPWY+GF GTIE T  K+SGV+YT+ G+IEE N TT+RI ELPIR+WTQDYKEFLE +  
Sbjct: 875  DPWYRGFSGTIEKTV-KESGVSYTVCGVIEEGNETTVRISELPIRRWTQDYKEFLESISQ 933

Query: 2133 GNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFD 1954
            GNDK K+PFI  + ++S ++ V   V L EEN+  ARQEGLLKKF+LTT+ISTSNMHLFD
Sbjct: 934  GNDKAKDPFIEGFTQHSDHSTVDIIVHLPEENLMAARQEGLLKKFKLTTSISTSNMHLFD 993

Query: 1953 RRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEII 1774
             +G+I+K+DTPEQIL+EFF +R EFYEKRKK  L +LE EL++LENKVRFIL VVNGEII
Sbjct: 994  PKGVIKKYDTPEQILEEFFHLRLEFYEKRKKVLLDNLEMELLKLENKVRFILAVVNGEII 1053

Query: 1773 VNNRKRKELAAELRQKGFTPISKSRKELE-EAATAGAQVGETNEDDPSLDDNN-DLKDYE 1600
            V+NR+R +L  EL+QKGFTP  K  K  E E A A     ET E+  S   N   + DYE
Sbjct: 1054 VSNRRRADLFLELQQKGFTPFPKKTKAQEPEVAGAIEDTEETEENSESASGNGARISDYE 1113

Query: 1599 YLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELDNLERIEA 1420
            YL+SM IG+LT+ERVQ+L  +RD+   EV EL+ +TPRSLW KDLD   +EL  LE+ EA
Sbjct: 1114 YLISMAIGTLTIERVQALCADRDKVNNEVAELRNSTPRSLWLKDLDALEMELGELEKSEA 1173

Query: 1419 SEDEKELNS----MNAEAARVFKLVPKHQRTIKXXXXXXXXXXXXXXSTTQPSSSLATAN 1252
              +E +  S     NA AA+V +  PK+ R  K                T  SS +    
Sbjct: 1174 LAEEAKKKSRNQVKNAPAAKVSRPAPKNPR--KNNKKANNAEAAAESRETS-SSFVFEME 1230

Query: 1251 TQPDVXXXXXXXXXXXXXXXXKMXXXXXXXXXXXIGLQQ--NRLAAYNEDSSPDGSVGNG 1078
              P++                K              + +  +RLAAYN DSSP+ S G  
Sbjct: 1231 KAPEIVKRKVGAVAKKAPAGKKQAKSAVVLSDDDDEVLELKDRLAAYNLDSSPENSAGKE 1290

Query: 1077 SD 1072
            ++
Sbjct: 1291 TE 1292


>ref|XP_002972906.1| hypothetical protein SELMODRAFT_98330 [Selaginella moellendorffii]
            gi|300159507|gb|EFJ26127.1| hypothetical protein
            SELMODRAFT_98330 [Selaginella moellendorffii]
          Length = 1151

 Score =  365 bits (938), Expect = 4e-98
 Identities = 176/290 (60%), Positives = 229/290 (78%)
 Frame = -1

Query: 2313 DPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMT 2134
            DPWYKGFKGTI  +A+K+SGV+YT+TGI+E+VN TT+R+LELPIRKWTQDYKEFLE L+ 
Sbjct: 860  DPWYKGFKGTIVKSASKESGVSYTVTGIVEQVNETTIRVLELPIRKWTQDYKEFLEALLC 919

Query: 2133 GNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFD 1954
            G +KIKEP I+DY+E++T+ RV+FE+ LSEE M  A  EGL KKF+L+TTISTSNM+LFD
Sbjct: 920  GTEKIKEPSIKDYREHNTDTRVHFEISLSEEKMAEALAEGLTKKFKLSTTISTSNMNLFD 979

Query: 1953 RRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEII 1774
            + G I+K+DTPEQIL++F+ IR E Y KRK+ ++++L++EL++L+NKVRFILGVV GEI+
Sbjct: 980  KDGHIRKYDTPEQILEDFYHIRLELYVKRKEVQVENLQYELLKLDNKVRFILGVVKGEIV 1039

Query: 1773 VNNRKRKELAAELRQKGFTPISKSRKELEEAATAGAQVGETNEDDPSLDDNNDLKDYEYL 1594
            VNNRKR EL  EL+ KGFTP  K  K  +     G       +D+  L+      DYEYL
Sbjct: 1040 VNNRKRAELLVELKTKGFTPFPKKAKASDLPVVGGDGSDVEADDEEKLNKGVRAGDYEYL 1099

Query: 1593 MSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILEL 1444
            +SMPIG+LTLE+VQ L +ERD+ EG+V ELKK TP+ LW+KDLD F+ +L
Sbjct: 1100 LSMPIGTLTLEKVQQLCNERDKLEGDVEELKKCTPKDLWEKDLDNFLEQL 1149


>ref|XP_002994651.1| hypothetical protein SELMODRAFT_138946 [Selaginella moellendorffii]
            gi|300137231|gb|EFJ04283.1| hypothetical protein
            SELMODRAFT_138946 [Selaginella moellendorffii]
          Length = 980

 Score =  365 bits (938), Expect = 4e-98
 Identities = 176/290 (60%), Positives = 229/290 (78%)
 Frame = -1

Query: 2313 DPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMT 2134
            DPWYKGFKGTI  +A+K+SGV+YT+TGI+E+VN TT+R+LELPIRKWTQDYKEFLE L+ 
Sbjct: 689  DPWYKGFKGTIVKSASKESGVSYTVTGIVEQVNETTIRVLELPIRKWTQDYKEFLEALLC 748

Query: 2133 GNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFD 1954
            G +KIKEP I+DY+E++T+ RV+FE+ LSEE M  A  EGL KKF+L+TTISTSNM+LFD
Sbjct: 749  GTEKIKEPSIKDYREHNTDTRVHFEISLSEEKMAEALAEGLTKKFKLSTTISTSNMNLFD 808

Query: 1953 RRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEII 1774
            + G I+K+DTPEQIL++F+ IR E Y KRK+ ++++L++EL++L+NKVRFILGVV GEI+
Sbjct: 809  KDGHIRKYDTPEQILEDFYHIRLELYVKRKEVQVENLQYELLKLDNKVRFILGVVKGEIV 868

Query: 1773 VNNRKRKELAAELRQKGFTPISKSRKELEEAATAGAQVGETNEDDPSLDDNNDLKDYEYL 1594
            VNNRKR EL  EL+ KGFTP  K  K  +     G       +D+  L+      DYEYL
Sbjct: 869  VNNRKRAELLVELKTKGFTPFPKKAKASDLPVVGGDGSDVEADDEEKLNKGVRAGDYEYL 928

Query: 1593 MSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILEL 1444
            +SMPIG+LTLE+VQ L +ERD+ EG+V ELKK TP+ LW+KDLD F+ +L
Sbjct: 929  LSMPIGTLTLEKVQQLCNERDKLEGDVEELKKCTPKDLWEKDLDNFLEQL 978


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  365 bits (936), Expect = 6e-98
 Identities = 207/416 (49%), Positives = 264/416 (63%), Gaps = 8/416 (1%)
 Frame = -1

Query: 2313 DPWYKGFKGTIEHT-ATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLM 2137
            DPWY+GF+GTIE T  TK   V YT+ GIIEEVN TTLRI ELP+RKWTQDYKEFLE +M
Sbjct: 872  DPWYRGFRGTIEKTDPTKQESVGYTVKGIIEEVNETTLRISELPVRKWTQDYKEFLESIM 931

Query: 2136 TGNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLF 1957
            TGNDKIK+PFI+DYKE++ +  V+FEV +SEEN+ +A+QEGLL+KF+LTT ISTSNMHLF
Sbjct: 932  TGNDKIKDPFIKDYKEHNDDTTVHFEVIMSEENLLMAKQEGLLQKFKLTTKISTSNMHLF 991

Query: 1956 DRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEI 1777
            D  G I+K++TPEQIL+EFF +R EFYEKRK+  L +LE EL++LENKVRFILGVV GEI
Sbjct: 992  DSNGTIKKYETPEQILEEFFHLRLEFYEKRKRVLLDNLELELLKLENKVRFILGVVRGEI 1051

Query: 1776 IVNNRKRKELAAELRQKGFTPISKSRKELEEAATAGAQVGETNEDDPSLDDNNDLK--DY 1603
            IV+NRKR +L  EL QKGFTP  K  K +E A        E  E++        ++  DY
Sbjct: 1052 IVSNRKRADLFHELHQKGFTPFPKKSKSVEIAVAGATDDTEEAEENTDAVSKGGVRATDY 1111

Query: 1602 EYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELDNLERIE 1423
            EYL+SM IG+LTLE+VQ L  +RD+    V +LKK TP++LW  DLD    ELD  ++ +
Sbjct: 1112 EYLLSMAIGTLTLEKVQELCADRDKLNKGVDDLKKATPKALWITDLDALERELDEQDKND 1171

Query: 1422 ASEDE--KELNS--MNAEAARVFKLVPKHQRTIKXXXXXXXXXXXXXXSTTQPSSSLATA 1255
            A  +E  K+L S  M+    +V +  PK+ R  K                   SS++   
Sbjct: 1172 ARAEETRKQLKSRVMSEAGMKVSRQAPKNPR--KNNKKANNAEPAAETMDVSASSAMEME 1229

Query: 1254 NTQPDVXXXXXXXXXXXXXXXXKMXXXXXXXXXXXIGLQ-QNRLAAYNEDSSPDGS 1090
            +    V                +M              + + RLAAYN +SSPDGS
Sbjct: 1230 SVPEVVKPKGRAAPRKAPAKKKEMPTSVLKDEDDDEVHELKERLAAYNLESSPDGS 1285


>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
            DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score =  357 bits (916), Expect = 1e-95
 Identities = 182/329 (55%), Positives = 237/329 (72%), Gaps = 2/329 (0%)
 Frame = -1

Query: 2313 DPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMT 2134
            DPWYKGFKGTIE TATK++G TYT+TGIIEEVN TTLRI ELP+R+WT+DYK+FLE +  
Sbjct: 868  DPWYKGFKGTIEKTATKEAGATYTVTGIIEEVNETTLRISELPVRRWTEDYKQFLESMTV 927

Query: 2133 GNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFD 1954
             NDK K+PFI++ + Y   N V FEV +SEEN+ +A+QEGLLKKF+L TTISTSNMHLFD
Sbjct: 928  SNDKAKDPFIKEVRAYGDENSVCFEVIMSEENLILAQQEGLLKKFKLATTISTSNMHLFD 987

Query: 1953 RRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEII 1774
              G I+K+D PE IL+EF+ +R E+YEKRKKA L+ LE EL+R+ENKV+FILGVV  EII
Sbjct: 988  SNGKIKKYDNPEDILEEFYHVRLEYYEKRKKALLEILELELLRIENKVKFILGVVKVEII 1047

Query: 1773 VNNRKRKELAAELRQKGFTPISKSRKELEEAATAGAQVGETNEDDPSLDDNNDLKDYEYL 1594
            VNNRKR +L  EL++KGFTP  K  K+  EA  A     +  + +  L+      DY+YL
Sbjct: 1048 VNNRKRADLLLELKEKGFTPFPK--KKAVEAVVADTS-DDAEDSEEELNRGVRAGDYDYL 1104

Query: 1593 MSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELDNLER--IEA 1420
            +SMPIG+LTLE+VQ L  ERD+  GEV +++  TP+ LW KDLD    +LD  ++  I+A
Sbjct: 1105 LSMPIGTLTLEKVQELCAERDQLNGEVEDMRNATPKLLWLKDLDVLEKQLDEQDKIDIQA 1164

Query: 1419 SEDEKELNSMNAEAARVFKLVPKHQRTIK 1333
             E  +++      AA +    PK ++ +K
Sbjct: 1165 EEAREKIKKKVMNAAGLKAPKPKPRKNVK 1193


>ref|XP_004308680.1| PREDICTED: DNA topoisomerase 2-like [Fragaria vesca subsp. vesca]
          Length = 1469

 Score =  355 bits (910), Expect = 6e-95
 Identities = 188/334 (56%), Positives = 241/334 (72%), Gaps = 7/334 (2%)
 Frame = -1

Query: 2313 DPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMT 2134
            DPWY+GF G IE T  K++G +YT  GIIEEVN TTLRI ELPIR+WTQDYKEFLE +  
Sbjct: 872  DPWYRGFTGFIEKTV-KETGTSYTACGIIEEVNETTLRISELPIRRWTQDYKEFLESISQ 930

Query: 2133 GNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFD 1954
            GNDK K+PFI  + ++S ++ V   V L EEN+  AR+EGLLKKFRLTT+I+T+NMHLFD
Sbjct: 931  GNDKAKDPFIEGFTQHSDHSTVEILVHLPEENLMAARKEGLLKKFRLTTSIATTNMHLFD 990

Query: 1953 RRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEII 1774
             +G+I+K+DT EQIL+EFF +R EFYEKRKK  L +LE EL+++ENKVRFILGVVNGEII
Sbjct: 991  PKGVIKKYDTAEQILEEFFPLRLEFYEKRKKVLLDNLELELLKMENKVRFILGVVNGEII 1050

Query: 1773 VNNRKRKELAAELRQKGFTPISKSRKELE-EAATAGAQVGETNEDDPSLDDNN-DLKDYE 1600
            V+NRKR +L  EL+QKGFTP  K  K +E E A A     ET E+  ++  N   + DYE
Sbjct: 1051 VSNRKRADLFLELQQKGFTPFPKKTKSVEPEVAGATEDTEETEENSETVISNGVRISDYE 1110

Query: 1599 YLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELDNLERIEA 1420
            YL+SM IG+LT+ERV++LL +RD+   +V +L+ +TP+SLW KDLD    EL+ LE+ EA
Sbjct: 1111 YLISMAIGTLTIERVEALLADRDKVNEQVNDLRGSTPKSLWLKDLDVLEAELNELEKSEA 1170

Query: 1419 SEDEKELNS-----MNAEAARVFKLVPKHQRTIK 1333
              DE +  S      NA   +V K  PK ++  K
Sbjct: 1171 LADEAKRKSRNNQIKNAPVGKVSKQAPKPRKNTK 1204


>ref|XP_002298421.2| DNA topoisomerase family protein [Populus trichocarpa]
            gi|550348289|gb|EEE83226.2| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 1485

 Score =  350 bits (898), Expect = 2e-93
 Identities = 186/333 (55%), Positives = 235/333 (70%), Gaps = 9/333 (2%)
 Frame = -1

Query: 2313 DPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMT 2134
            +PWY+GFKGTIE  A+K++G +YT+ G+I EVN TTLRI ELPIR+WT DYK FL  +  
Sbjct: 886  NPWYRGFKGTIEKGASKEAGCSYTVNGVINEVNETTLRITELPIRRWTDDYKAFLNSVTE 945

Query: 2133 GN-----DKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSN 1969
            GN     +  K+PFI+D+++Y  +  V FEV LSEENM IA+QEGLLKKF+LTTTISTSN
Sbjct: 946  GNRDENGNLPKDPFIKDFRKYGDDATVVFEVLLSEENMMIAKQEGLLKKFKLTTTISTSN 1005

Query: 1968 MHLFDRRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVV 1789
            MHLFD  G+I+K+D PEQIL+EFF +R E+YE+RKK  L++LEFEL++LENKVRFILGVV
Sbjct: 1006 MHLFDSAGVIKKYDNPEQILEEFFHLRLEYYERRKKVLLENLEFELLKLENKVRFILGVV 1065

Query: 1788 NGEIIVNNRKRKELAAELRQKGFTPISKSRKELEEAATAGAQVGETNEDDPSLDDNNDLK 1609
             GEIIVNNRKR +L  EL QKGFTPI K  K    A  AGA   +   +D          
Sbjct: 1066 RGEIIVNNRKRADLFLELHQKGFTPIPKKSK----AVVAGATDDKDEAEDSLEVSGVRAS 1121

Query: 1608 DYEYLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELDNLER 1429
            DY+YL+SM IG+LTLE+VQ L  + D+  GEV  L+KTTP  LW KDL+   ++LD L++
Sbjct: 1122 DYDYLLSMAIGTLTLEKVQQLCADHDKLNGEVDNLRKTTPIVLWVKDLEALEMQLDVLDK 1181

Query: 1428 IEASEDE---KELNSMNAEAA-RVFKLVPKHQR 1342
             +A  +E   K     N EA  +V K  PK+ R
Sbjct: 1182 YDAEAEEARKKLKGDANGEAGFKVSKQAPKNPR 1214


>ref|XP_006345427.1| PREDICTED: DNA topoisomerase 2-like [Solanum tuberosum]
          Length = 1485

 Score =  348 bits (893), Expect = 6e-93
 Identities = 171/304 (56%), Positives = 225/304 (74%), Gaps = 2/304 (0%)
 Frame = -1

Query: 2313 DPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMT 2134
            DPWYKGFKGTIE TATK++G TYT+TGIIEE + TTLRI ELP+R+WT+DYK+FLE +  
Sbjct: 869  DPWYKGFKGTIEKTATKETGATYTVTGIIEEFSETTLRISELPVRRWTEDYKQFLESMTV 928

Query: 2133 GNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFD 1954
              DK K+ FI++ + Y   N V FEV +SEEN+ +A+QEGLLKKF+LTTTISTSNMHLFD
Sbjct: 929  STDKSKDAFIKEVRAYGDENSVCFEVIMSEENLLLAQQEGLLKKFKLTTTISTSNMHLFD 988

Query: 1953 RRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEII 1774
             +G I+K+D PE+IL+EF+ +R E+YEKRKK  L+ LE EL+R+ENKVRFILGVV GEII
Sbjct: 989  SKGKIKKYDAPEEILEEFYHVRLEYYEKRKKTLLEILELELLRIENKVRFILGVVKGEII 1048

Query: 1773 VNNRKRKELAAELRQKGFTPISKSRKELEEAATAGAQVGETNEDDPSLDDNNDLK--DYE 1600
            VNNRKR +L  EL+ KGFTP  K +K +E          E +E+ P  + N  ++  DY+
Sbjct: 1049 VNNRKRADLLLELKNKGFTPFPK-KKPVEAVVADSTDDAEDSEESPE-ESNKGVRASDYD 1106

Query: 1599 YLMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELDNLERIEA 1420
            YL+SM IG+LTLE+VQ L  +RD+   EV +++  TP+ LW KDLD    +LD  ++++ 
Sbjct: 1107 YLLSMAIGTLTLEKVQELCADRDKLNAEVEDMRNATPKDLWMKDLDVLDKQLDEQDKLDI 1166

Query: 1419 SEDE 1408
              +E
Sbjct: 1167 QTEE 1170


>ref|XP_004229644.1| PREDICTED: DNA topoisomerase 2-like [Solanum lycopersicum]
          Length = 1477

 Score =  348 bits (893), Expect = 6e-93
 Identities = 177/330 (53%), Positives = 233/330 (70%), Gaps = 3/330 (0%)
 Frame = -1

Query: 2313 DPWYKGFKGTIEHTATKDSGVTYTLTGIIEEVNSTTLRILELPIRKWTQDYKEFLEVLMT 2134
            DPWYKGFKG IE TATK++G TYT+TGIIEEV+ TTLRI ELP+R+WT+DYK+FLE +  
Sbjct: 869  DPWYKGFKGKIEKTATKETGATYTVTGIIEEVSETTLRISELPVRRWTEDYKQFLESMTV 928

Query: 2133 GNDKIKEPFIRDYKEYSTNNRVYFEVFLSEENMNIARQEGLLKKFRLTTTISTSNMHLFD 1954
              DK K+ FI++ + Y   N V FEV +SE+N+ +A+QEGLLKKF+LTTTISTSNMHLFD
Sbjct: 929  STDKAKDSFIKEVRAYGDENSVCFEVIMSEDNLLLAQQEGLLKKFKLTTTISTSNMHLFD 988

Query: 1953 RRGIIQKFDTPEQILKEFFDIRFEFYEKRKKAKLQSLEFELVRLENKVRFILGVVNGEII 1774
             +G I+K+D PE+IL+EF+ +R E+YEKRKKA L+ LE EL+R+ENKV+FILGVV GEII
Sbjct: 989  SKGKIKKYDAPEEILEEFYHVRLEYYEKRKKALLEILELELLRIENKVKFILGVVKGEII 1048

Query: 1773 VNNRKRKELAAELRQKGFTPISKSRKELEEAATAGAQVGETNEDDPSLDDNN-DLKDYEY 1597
            VNNRKR EL  EL+ KGFTP  K +K +E          + +E+ P          DY+Y
Sbjct: 1049 VNNRKRAELLLELKNKGFTPFPK-KKPVEAVVADSTDDADDSEESPEESSRGVRASDYDY 1107

Query: 1596 LMSMPIGSLTLERVQSLLDERDRKEGEVVELKKTTPRSLWDKDLDEFILELDNLERIEAS 1417
            L+SM IG+LTLE+VQ L  +RD+   EV +++  TP+ LW KDLD    +LD  ++I+  
Sbjct: 1108 LLSMAIGTLTLEKVQELCADRDKLNAEVEDMRNATPKHLWMKDLDVLDKQLDEQDKIDIQ 1167

Query: 1416 EDE--KELNSMNAEAARVFKLVPKHQRTIK 1333
             +E  ++L      AA      PK ++T K
Sbjct: 1168 TEEAREKLKKKVMNAAGKAAPKPKPRKTNK 1197