BLASTX nr result

ID: Ephedra26_contig00000947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00000947
         (505 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001760673.1| predicted protein [Physcomitrella patens] gi...    74   2e-11
ref|YP_007057552.1| putative membrane-associated Zn-dependent pr...    59   9e-07

>ref|XP_001760673.1| predicted protein [Physcomitrella patens]
           gi|162688033|gb|EDQ74412.1| predicted protein
           [Physcomitrella patens]
          Length = 728

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
 Frame = +2

Query: 8   LLRWPMVFPFPGLGAIGCVTSYKGCLPNRDCSLNLSLASVLSCVFVSSLACLIGYQMGIE 187
           ++R P   P P  GA G    YKGCLP+R   L+LSL+S  + + +S      G  MG  
Sbjct: 509 MVRLPFSLPVPHQGAFGTAVYYKGCLPDRTSLLDLSLSSAFASLAIS------GALMGAS 562

Query: 188 HV-FASRDS---VSFYGFFLVPXXXXXXXXXXXXXXXXXXXATFLDE-SQGLEYVVSPVE 352
           +  +AS +S   V F G  LVP                   AT   E  + L  V++P+ 
Sbjct: 563 YTSWASSNSSGVVGFDGLLLVPEHLFSYSQLFSWLIHNLSVATISGEFGEDLNLVLNPLA 622

Query: 353 LCGLIGLCFSCFNLVPLKRFDGVRILSAVLGREKASGLAVVLQYLV 490
           L G++GL  +   L+P+  FDG RI++ + GR+    +  V   LV
Sbjct: 623 LAGVLGLHSTALGLLPVGIFDGGRIVTGIFGRDAQHIVTTVTFILV 668


>ref|YP_007057552.1| putative membrane-associated Zn-dependent protease [Rivularia sp.
           PCC 7116] gi|504933465|ref|WP_015120567.1| putative
           membrane-associated Zn-dependent protease [Rivularia sp.
           PCC 7116] gi|427373049|gb|AFY57005.1| putative
           membrane-associated Zn-dependent protease [Rivularia sp.
           PCC 7116]
          Length = 495

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 1/166 (0%)
 Frame = +2

Query: 2   GELLRWPMVFPFPGLGAIGCVTSYKGCLPNRDCSLNLSLASVLSCVFVSSLACLIGYQMG 181
           G  L  P + P   +G+ G +T ++  LPNR    +++LA       VS L  ++G  + 
Sbjct: 279 GVKLSLPYLLPSVQIGSFGAITRFESLLPNRKALFDIALAGPAVGGIVSFLMLILGLLLS 338

Query: 182 IEHVFASRDSVSFYGFFLVPXXXXXXXXXXXXXXXXXXXATFLDESQGLEYV-VSPVELC 358
            E  F    +  F G  LV                      FL  +     V V+P+ + 
Sbjct: 339 HEGSFFQLPNEFFQGSILV----------------GILARVFLGNTLQSSLVDVNPLVII 382

Query: 359 GLIGLCFSCFNLVPLKRFDGVRILSAVLGREKASGLAVVLQYLVTG 496
           G +GL  S FNL+P  + DG RI+ A+ GR K +G       ++ G
Sbjct: 383 GWLGLVVSAFNLMPAGQLDGGRIVQAIYGR-KIAGRTTFATLIILG 427


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