BLASTX nr result
ID: Ephedra26_contig00000755
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00000755
(842 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR18422.1| unknown [Picea sitchensis] 171 2e-40
gb|ABK25253.1| unknown [Picea sitchensis] 171 2e-40
ref|XP_001777334.1| predicted protein [Physcomitrella patens] gi... 166 1e-38
ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding prote... 164 5e-38
emb|CBI16387.3| unnamed protein product [Vitis vinifera] 164 5e-38
ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding prote... 164 5e-38
ref|XP_001784132.1| predicted protein [Physcomitrella patens] gi... 164 5e-38
ref|XP_004486967.1| PREDICTED: polyadenylate-binding protein RBP... 163 8e-38
ref|XP_004486966.1| PREDICTED: polyadenylate-binding protein RBP... 163 8e-38
ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 162 1e-37
ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP... 162 1e-37
ref|XP_006850190.1| hypothetical protein AMTR_s00022p00247520 [A... 161 3e-37
ref|XP_006470600.1| PREDICTED: polyadenylate-binding protein RBP... 160 5e-37
ref|XP_006446110.1| hypothetical protein CICLE_v10015576mg [Citr... 160 5e-37
ref|XP_002313332.2| hypothetical protein POPTR_0009s05920g [Popu... 159 9e-37
ref|XP_004232721.1| PREDICTED: polyadenylate-binding protein RBP... 159 9e-37
gb|ESW22363.1| hypothetical protein PHAVU_005G147800g [Phaseolus... 159 1e-36
ref|XP_004248403.1| PREDICTED: polyadenylate-binding protein RBP... 158 2e-36
ref|XP_002513488.1| nuclear acid binding protein, putative [Rici... 158 3e-36
ref|XP_003597428.1| RNA-binding protein [Medicago truncatula] gi... 158 3e-36
>gb|ABR18422.1| unknown [Picea sitchensis]
Length = 418
Score = 171 bits (434), Expect = 2e-40
Identities = 84/134 (62%), Positives = 96/134 (71%), Gaps = 20/134 (14%)
Frame = +2
Query: 500 TSPDDIRTLWVGDLQYWMDXXXXXXXXX--------------------GYGFVEFHSHAA 619
TS D++RTLWVGDLQYWMD GYGFVEF SHA
Sbjct: 73 TSADEVRTLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFASHAG 132
Query: 620 AEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETF 799
AE+ LQ++NG QMPNTEQ++RLNWATFGIGEKRP+ GPD+PIFVGDLA+DV DYLLQETF
Sbjct: 133 AERFLQNHNGAQMPNTEQFYRLNWATFGIGEKRPEMGPDYPIFVGDLASDVTDYLLQETF 192
Query: 800 RQRYPSVKGAKVVT 841
R RY +VKGAKVV+
Sbjct: 193 RSRYQTVKGAKVVS 206
>gb|ABK25253.1| unknown [Picea sitchensis]
Length = 487
Score = 171 bits (434), Expect = 2e-40
Identities = 84/134 (62%), Positives = 96/134 (71%), Gaps = 20/134 (14%)
Frame = +2
Query: 500 TSPDDIRTLWVGDLQYWMDXXXXXXXXX--------------------GYGFVEFHSHAA 619
TS D++RTLWVGDLQYWMD GYGFVEF SHA
Sbjct: 73 TSADEVRTLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFASHAG 132
Query: 620 AEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETF 799
AE+ LQ++NG QMPNTEQ++RLNWATFGIGEKRP+ GPD+PIFVGDLA+DV DYLLQETF
Sbjct: 133 AERFLQNHNGAQMPNTEQFYRLNWATFGIGEKRPEMGPDYPIFVGDLASDVTDYLLQETF 192
Query: 800 RQRYPSVKGAKVVT 841
R RY +VKGAKVV+
Sbjct: 193 RSRYQTVKGAKVVS 206
>ref|XP_001777334.1| predicted protein [Physcomitrella patens]
gi|168061528|ref|XP_001782740.1| predicted protein
[Physcomitrella patens] gi|162665773|gb|EDQ52446.1|
predicted protein [Physcomitrella patens]
gi|162671310|gb|EDQ57864.1| predicted protein
[Physcomitrella patens]
Length = 416
Score = 166 bits (420), Expect = 1e-38
Identities = 83/133 (62%), Positives = 94/133 (70%), Gaps = 20/133 (15%)
Frame = +2
Query: 503 SPDDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAAA 622
S ++++TLWVGDLQYWMD GYGFVEF SHAAA
Sbjct: 3 SHEEVKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHAAA 62
Query: 623 EKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETFR 802
EK+LQ+YNG QMPNTEQ FRLNWA+FGIGE+RP+ GP+ IFVGDLA DV DY+LQETFR
Sbjct: 63 EKILQAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFR 122
Query: 803 QRYPSVKGAKVVT 841
RYPSVKGAKVVT
Sbjct: 123 TRYPSVKGAKVVT 135
>ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 164 bits (414), Expect = 5e-38
Identities = 81/134 (60%), Positives = 94/134 (70%), Gaps = 20/134 (14%)
Frame = +2
Query: 500 TSPDDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAA 619
TS +++RTLW+GDLQYW+D GYGFVEF SHAA
Sbjct: 35 TSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAA 94
Query: 620 AEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETF 799
AE++LQ+YNG QMP TEQ FRLNWA+FGIGE+RPD GP+ IFVGDLA DV DYLLQETF
Sbjct: 95 AERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETF 154
Query: 800 RQRYPSVKGAKVVT 841
R +YPSV+GAKVVT
Sbjct: 155 RAQYPSVRGAKVVT 168
>emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 164 bits (414), Expect = 5e-38
Identities = 81/134 (60%), Positives = 94/134 (70%), Gaps = 20/134 (14%)
Frame = +2
Query: 500 TSPDDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAA 619
TS +++RTLW+GDLQYW+D GYGFVEF SHAA
Sbjct: 35 TSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAA 94
Query: 620 AEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETF 799
AE++LQ+YNG QMP TEQ FRLNWA+FGIGE+RPD GP+ IFVGDLA DV DYLLQETF
Sbjct: 95 AERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETF 154
Query: 800 RQRYPSVKGAKVVT 841
R +YPSV+GAKVVT
Sbjct: 155 RAQYPSVRGAKVVT 168
>ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 164 bits (414), Expect = 5e-38
Identities = 81/134 (60%), Positives = 94/134 (70%), Gaps = 20/134 (14%)
Frame = +2
Query: 500 TSPDDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAA 619
TS +++RTLW+GDLQYW+D GYGFVEF SHAA
Sbjct: 35 TSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAA 94
Query: 620 AEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETF 799
AE++LQ+YNG QMP TEQ FRLNWA+FGIGE+RPD GP+ IFVGDLA DV DYLLQETF
Sbjct: 95 AERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETF 154
Query: 800 RQRYPSVKGAKVVT 841
R +YPSV+GAKVVT
Sbjct: 155 RAQYPSVRGAKVVT 168
>ref|XP_001784132.1| predicted protein [Physcomitrella patens]
gi|162664332|gb|EDQ51056.1| predicted protein
[Physcomitrella patens]
Length = 453
Score = 164 bits (414), Expect = 5e-38
Identities = 81/131 (61%), Positives = 92/131 (70%), Gaps = 20/131 (15%)
Frame = +2
Query: 509 DDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAAAEK 628
++++TLWVGDLQYWMD GYGFVEF SH AAEK
Sbjct: 40 EEVKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHVAAEK 99
Query: 629 VLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETFRQR 808
+LQ+YNG QMPNTEQ FRLNWA+FGIGE+RP+ GP+ IFVGDLA DV DY+LQETFR R
Sbjct: 100 ILQAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTR 159
Query: 809 YPSVKGAKVVT 841
YPSVKGAKVVT
Sbjct: 160 YPSVKGAKVVT 170
>ref|XP_004486967.1| PREDICTED: polyadenylate-binding protein RBP47B'-like isoform X2
[Cicer arietinum]
Length = 427
Score = 163 bits (412), Expect = 8e-38
Identities = 82/134 (61%), Positives = 92/134 (68%), Gaps = 20/134 (14%)
Frame = +2
Query: 500 TSPDDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAA 619
+S +++RTLW+GDLQYW+D GYGFVEF SH A
Sbjct: 9 SSLEEVRTLWIGDLQYWVDETYLTHCFSHTGEVISIKIIRNKITGQPEGYGFVEFVSHTA 68
Query: 620 AEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETF 799
AE+VLQSYNG QMP TEQ FRLNWA+FGIGE+RPD GPD IFVGDLA DV DYLLQETF
Sbjct: 69 AERVLQSYNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETF 128
Query: 800 RQRYPSVKGAKVVT 841
R YPSV+GAKVVT
Sbjct: 129 RTHYPSVRGAKVVT 142
>ref|XP_004486966.1| PREDICTED: polyadenylate-binding protein RBP47B'-like isoform X1
[Cicer arietinum]
Length = 429
Score = 163 bits (412), Expect = 8e-38
Identities = 82/134 (61%), Positives = 92/134 (68%), Gaps = 20/134 (14%)
Frame = +2
Query: 500 TSPDDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAA 619
+S +++RTLW+GDLQYW+D GYGFVEF SH A
Sbjct: 9 SSLEEVRTLWIGDLQYWVDETYLTHCFSHTGEVISIKIIRNKITGQPEGYGFVEFVSHTA 68
Query: 620 AEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETF 799
AE+VLQSYNG QMP TEQ FRLNWA+FGIGE+RPD GPD IFVGDLA DV DYLLQETF
Sbjct: 69 AERVLQSYNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETF 128
Query: 800 RQRYPSVKGAKVVT 841
R YPSV+GAKVVT
Sbjct: 129 RTHYPSVRGAKVVT 142
>ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
RBP47B'-like [Cucumis sativus]
Length = 427
Score = 162 bits (411), Expect = 1e-37
Identities = 80/134 (59%), Positives = 94/134 (70%), Gaps = 20/134 (14%)
Frame = +2
Query: 500 TSPDDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAA 619
T+ +++RTLW+GDLQYW+D GYGFVEF SHAA
Sbjct: 14 TTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAA 73
Query: 620 AEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETF 799
AE++LQ+YNG QMP TEQ FRLNWA+FGIGE+RPD GP+ IFVGDLA DV DYLLQETF
Sbjct: 74 AERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETF 133
Query: 800 RQRYPSVKGAKVVT 841
R +YPSV+GAKVVT
Sbjct: 134 RAQYPSVRGAKVVT 147
>ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 162 bits (411), Expect = 1e-37
Identities = 80/134 (59%), Positives = 94/134 (70%), Gaps = 20/134 (14%)
Frame = +2
Query: 500 TSPDDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAA 619
T+ +++RTLW+GDLQYW+D GYGFVEF SHAA
Sbjct: 14 TTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAA 73
Query: 620 AEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETF 799
AE++LQ+YNG QMP TEQ FRLNWA+FGIGE+RPD GP+ IFVGDLA DV DYLLQETF
Sbjct: 74 AERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETF 133
Query: 800 RQRYPSVKGAKVVT 841
R +YPSV+GAKVVT
Sbjct: 134 RAQYPSVRGAKVVT 147
>ref|XP_006850190.1| hypothetical protein AMTR_s00022p00247520 [Amborella trichopoda]
gi|548853788|gb|ERN11771.1| hypothetical protein
AMTR_s00022p00247520 [Amborella trichopoda]
Length = 451
Score = 161 bits (407), Expect = 3e-37
Identities = 80/134 (59%), Positives = 93/134 (69%), Gaps = 20/134 (14%)
Frame = +2
Query: 500 TSPDDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAA 619
TS ++IRTLW+GDLQYW+D GYGFVEF SHAA
Sbjct: 39 TSVEEIRTLWIGDLQYWVDENYLHTCFSHTGEVISIKIIRNKITGQPEGYGFVEFVSHAA 98
Query: 620 AEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETF 799
AE++LQ+YNG MP TEQ FR+NWA+FGIGE+RPD GP+ IFVGDLA DV DYLLQETF
Sbjct: 99 AERILQTYNGTPMPGTEQCFRMNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETF 158
Query: 800 RQRYPSVKGAKVVT 841
R +YPSV+GAKVVT
Sbjct: 159 RAQYPSVRGAKVVT 172
>ref|XP_006470600.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Citrus
sinensis]
Length = 424
Score = 160 bits (405), Expect = 5e-37
Identities = 80/131 (61%), Positives = 90/131 (68%), Gaps = 20/131 (15%)
Frame = +2
Query: 509 DDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAAAEK 628
+++RTLW+GDLQYW D GYGFVEF SHAAAE+
Sbjct: 21 EEVRTLWIGDLQYWFDENYLSSCFAHTGEVVSIKIIRNKITGQPEGYGFVEFVSHAAAER 80
Query: 629 VLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETFRQR 808
VLQ+YNG MP TEQ FRLNWA+FGIGEKRPD GP+ IFVGDLA DV DYLLQETFR +
Sbjct: 81 VLQTYNGTPMPGTEQNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQ 140
Query: 809 YPSVKGAKVVT 841
YPSV+GAKVVT
Sbjct: 141 YPSVRGAKVVT 151
>ref|XP_006446110.1| hypothetical protein CICLE_v10015576mg [Citrus clementina]
gi|557548721|gb|ESR59350.1| hypothetical protein
CICLE_v10015576mg [Citrus clementina]
Length = 385
Score = 160 bits (405), Expect = 5e-37
Identities = 80/131 (61%), Positives = 90/131 (68%), Gaps = 20/131 (15%)
Frame = +2
Query: 509 DDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAAAEK 628
+++RTLW+GDLQYW D GYGFVEF SHAAAE+
Sbjct: 21 EEVRTLWIGDLQYWFDENYLSSCFAHTGEVVSIKIIRNKITGQPEGYGFVEFVSHAAAER 80
Query: 629 VLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETFRQR 808
VLQ+YNG MP TEQ FRLNWA+FGIGEKRPD GP+ IFVGDLA DV DYLLQETFR +
Sbjct: 81 VLQTYNGTPMPGTEQNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQ 140
Query: 809 YPSVKGAKVVT 841
YPSV+GAKVVT
Sbjct: 141 YPSVRGAKVVT 151
>ref|XP_002313332.2| hypothetical protein POPTR_0009s05920g [Populus trichocarpa]
gi|550331124|gb|EEE87287.2| hypothetical protein
POPTR_0009s05920g [Populus trichocarpa]
Length = 416
Score = 159 bits (403), Expect = 9e-37
Identities = 79/131 (60%), Positives = 90/131 (68%), Gaps = 20/131 (15%)
Frame = +2
Query: 509 DDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAAAEK 628
+++RTLW+GDLQYW D GYGFVEF SHAAAE+
Sbjct: 17 EEVRTLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQPEGYGFVEFVSHAAAER 76
Query: 629 VLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETFRQR 808
+LQ+YNG QMP TEQ FRLNWA+FGIGE+RPD GP+ IFVGDLA DV DYLLQETFR
Sbjct: 77 ILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVH 136
Query: 809 YPSVKGAKVVT 841
YPSV+GAKVVT
Sbjct: 137 YPSVRGAKVVT 147
>ref|XP_004232721.1| PREDICTED: polyadenylate-binding protein RBP45-like isoform 2
[Solanum lycopersicum]
Length = 413
Score = 159 bits (403), Expect = 9e-37
Identities = 80/134 (59%), Positives = 92/134 (68%), Gaps = 20/134 (14%)
Frame = +2
Query: 500 TSPDDIRTLWVGDLQYWMDXXXXXXXXX--------------------GYGFVEFHSHAA 619
TS D+IR+LW+GDLQ+WMD GYGF+EF SHAA
Sbjct: 73 TSADEIRSLWIGDLQFWMDEQYLLNCFAQTGEVTSAKVIRNKQSGQSEGYGFIEFISHAA 132
Query: 620 AEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETF 799
AE+ LQ+YNG MPN EQ FRLNWA+ G GEKR DNGP++ IFVGDLAADV+DY+LQETF
Sbjct: 133 AERNLQAYNGTLMPNIEQNFRLNWASLGSGEKRSDNGPEYTIFVGDLAADVSDYMLQETF 192
Query: 800 RQRYPSVKGAKVVT 841
R YPSVKGAKVVT
Sbjct: 193 RANYPSVKGAKVVT 206
>gb|ESW22363.1| hypothetical protein PHAVU_005G147800g [Phaseolus vulgaris]
Length = 424
Score = 159 bits (402), Expect = 1e-36
Identities = 78/131 (59%), Positives = 92/131 (70%), Gaps = 20/131 (15%)
Frame = +2
Query: 509 DDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAAAEK 628
+++RTLW+GDLQYW+D GYGFVEF SHA+AE+
Sbjct: 15 EEVRTLWIGDLQYWVDEAYLSHCFAHTGEVLSIKIIRNKMTGQPEGYGFVEFVSHASAER 74
Query: 629 VLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETFRQR 808
VLQ+YNG+QMP TEQ FRLNWA+FGIGE+RPD GP+ IFVGDLA +V DYLLQETFR
Sbjct: 75 VLQTYNGMQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPEVTDYLLQETFRAH 134
Query: 809 YPSVKGAKVVT 841
YPSV+GAKVVT
Sbjct: 135 YPSVRGAKVVT 145
>ref|XP_004248403.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Solanum
lycopersicum]
Length = 410
Score = 158 bits (400), Expect = 2e-36
Identities = 78/134 (58%), Positives = 91/134 (67%), Gaps = 20/134 (14%)
Frame = +2
Query: 500 TSPDDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAA 619
TS D++RTLW+GDLQ+WMD GYGF+EF+SHAA
Sbjct: 70 TSADEVRTLWIGDLQFWMDEQYLYSCFAQTGEVVSAKVIRNKQTQQSEGYGFIEFNSHAA 129
Query: 620 AEKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETF 799
AE+ LQ+YNG MPN EQ FRLNWA+ G GEKR DN P++ IFVGDLAADV DY+LQETF
Sbjct: 130 AERNLQAYNGTLMPNIEQNFRLNWASLGSGEKRSDNTPEYTIFVGDLAADVTDYMLQETF 189
Query: 800 RQRYPSVKGAKVVT 841
R YPS+KGAKVVT
Sbjct: 190 RPNYPSIKGAKVVT 203
>ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding
protein, putative [Ricinus communis]
Length = 412
Score = 158 bits (399), Expect = 3e-36
Identities = 77/131 (58%), Positives = 90/131 (68%), Gaps = 20/131 (15%)
Frame = +2
Query: 509 DDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAAAEK 628
+++RTLW+GDLQYW+D GYGFVEF SH AAE+
Sbjct: 19 EEVRTLWIGDLQYWVDENYLSSCFAHTGEVLSIKIIRNKITGQPEGYGFVEFVSHVAAER 78
Query: 629 VLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETFRQR 808
+LQ+YNG QMP TEQ FRLNWA+FGIGE+RPD GP+ IFVGDL+ DV DYLLQETFR
Sbjct: 79 ILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLSPDVTDYLLQETFRAN 138
Query: 809 YPSVKGAKVVT 841
YPSV+GAKVVT
Sbjct: 139 YPSVRGAKVVT 149
>ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
gi|355486476|gb|AES67679.1| RNA-binding protein
[Medicago truncatula]
Length = 428
Score = 158 bits (399), Expect = 3e-36
Identities = 79/133 (59%), Positives = 91/133 (68%), Gaps = 20/133 (15%)
Frame = +2
Query: 503 SPDDIRTLWVGDLQYWMD--------------------XXXXXXXXXGYGFVEFHSHAAA 622
S +++RTLW+GDLQYW+D GYGF+EF SH+AA
Sbjct: 10 SLEEVRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAA 69
Query: 623 EKVLQSYNGIQMPNTEQYFRLNWATFGIGEKRPDNGPDFPIFVGDLAADVNDYLLQETFR 802
E+VLQ+YNG QMP TEQ FRLNWA+FGIGE+RPD GPD IFVGDLA DV DYLLQETFR
Sbjct: 70 ERVLQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETFR 129
Query: 803 QRYPSVKGAKVVT 841
Y SV+GAKVVT
Sbjct: 130 THYGSVRGAKVVT 142