BLASTX nr result
ID: Ephedra26_contig00000694
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00000694
(861 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK24055.1| unknown [Picea sitchensis] 197 5e-48
gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativ... 187 4e-45
ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group] g... 187 6e-45
gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indi... 187 6e-45
dbj|BAJ86334.1| predicted protein [Hordeum vulgare subsp. vulgare] 186 7e-45
ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 182 1e-43
ref|XP_003557886.1| PREDICTED: ribonucleoprotein At2g37220, chlo... 181 3e-43
ref|XP_006658862.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 180 5e-43
ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [A... 179 9e-43
ref|XP_004958419.1| PREDICTED: ribonucleoprotein At2g37220, chlo... 179 1e-42
ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp... 179 1e-42
ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr... 178 2e-42
ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citr... 178 2e-42
ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citr... 178 2e-42
ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citr... 178 2e-42
ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citr... 178 2e-42
ref|NP_001151728.1| ribonucleoprotein A [Zea mays] gi|195649373|... 178 2e-42
gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus pe... 178 3e-42
ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 178 3e-42
ref|XP_003535181.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 177 3e-42
>gb|ABK24055.1| unknown [Picea sitchensis]
Length = 299
Score = 197 bits (500), Expect = 5e-48
Identities = 108/206 (52%), Positives = 134/206 (65%), Gaps = 2/206 (0%)
Frame = -2
Query: 614 PRLCLSFRHNLSHVVARRVSMAPESALAAXXXXXXXXXXXXXXXERNEPSPVMDDSGYKL 435
P + + N + +AR V+MAP A E + PS + K+
Sbjct: 68 PLFSSTHKKNNNSFLARSVTMAPRQA-------SEWEEDEEEDIENSSPS-----ANLKV 115
Query: 434 FVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFERFN 255
FVGNL ++VDS +LA LF+++G+V MVEVIYDR TGRSRGF FVTMAT+ A E+FN
Sbjct: 116 FVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAVEKFN 175
Query: 254 GYELDGRALRVNSGPPPPKDFSSPRGSPR--EXXXXXDSENRIFVGNLPWSADDLSLQQL 81
GYE GR LRVNSGPPPPKD +PRG R + +S NR+FVGNLPW ADDLSL+QL
Sbjct: 176 GYEYQGRTLRVNSGPPPPKDSFAPRGGFRNEKPSGNYNSANRVFVGNLPWGADDLSLEQL 235
Query: 80 FNDYGTVLNTRVVTDRATGRSRGFGF 3
F+D+G V+ +VV DR TGRSRGFGF
Sbjct: 236 FSDHGKVMEAKVVYDRETGRSRGFGF 261
Score = 77.0 bits (188), Expect = 8e-12
Identities = 38/96 (39%), Positives = 56/96 (58%)
Frame = -2
Query: 479 RNEPSPVMDDSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVT 300
RNE +S ++FVGNL + D L LF + G+V +V+YDR TGRSRGFGFVT
Sbjct: 204 RNEKPSGNYNSANRVFVGNLPWGADDLSLEQLFSDHGKVMEAKVVYDRETGRSRGFGFVT 263
Query: 299 MATEEGCKTAFERFNGYELDGRALRVNSGPPPPKDF 192
+++ + + A +G ++DGR ++V P F
Sbjct: 264 LSSPQEIEEAISSLDGSDMDGRQIKVTLAETKPASF 299
>gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 205
Score = 187 bits (475), Expect = 4e-45
Identities = 90/146 (61%), Positives = 112/146 (76%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
K+FVGNL ++VDS QLAGLF++AG V MVEV+YDR TGRSRGFGFVTM+T E A E+
Sbjct: 22 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAIEQ 81
Query: 260 FNGYELDGRALRVNSGPPPPKDFSSPRGSPREXXXXXDSENRIFVGNLPWSADDLSLQQL 81
FNGY GR LRVNSGPPPP+D +PR SPR DS N+++VGNL W D+ +L+ L
Sbjct: 82 FNGYTFQGRPLRVNSGPPPPRDDFAPR-SPRGGGSNFDSSNKLYVGNLAWGVDNSTLENL 140
Query: 80 FNDYGTVLNTRVVTDRATGRSRGFGF 3
F++ GTVL+ +V+ DR +GRSRGFGF
Sbjct: 141 FSEQGTVLDAKVIYDRESGRSRGFGF 166
Score = 82.0 bits (201), Expect = 3e-13
Identities = 41/85 (48%), Positives = 52/85 (61%)
Frame = -2
Query: 452 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 273
DS KL+VGNL++ VD+ L LF E G V +VIYDR +GRSRGFGFVT + E
Sbjct: 118 DSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNN 177
Query: 272 AFERFNGYELDGRALRVNSGPPPPK 198
A +G +LDGR +RV P+
Sbjct: 178 AISNLDGVDLDGRQIRVTVAESKPR 202
>ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|22296371|dbj|BAC10140.1| putative 29 kDa
ribonucleoprotein A, chloroplast precursor [Oryza sativa
Japonica Group] gi|113611900|dbj|BAF22278.1|
Os07g0631900 [Oryza sativa Japonica Group]
gi|125601192|gb|EAZ40768.1| hypothetical protein
OsJ_25244 [Oryza sativa Japonica Group]
Length = 264
Score = 187 bits (474), Expect = 6e-45
Identities = 90/146 (61%), Positives = 112/146 (76%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
K+FVGNL ++VDS QLAGLF++AG V MVEV+YDR TGRSRGFGFVTM+T E A E+
Sbjct: 81 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 140
Query: 260 FNGYELDGRALRVNSGPPPPKDFSSPRGSPREXXXXXDSENRIFVGNLPWSADDLSLQQL 81
FNGY GR LRVNSGPPPP+D +PR SPR DS N+++VGNL W D+ +L+ L
Sbjct: 141 FNGYTFQGRPLRVNSGPPPPRDDFAPR-SPRGGGSNFDSSNKLYVGNLAWGVDNSTLENL 199
Query: 80 FNDYGTVLNTRVVTDRATGRSRGFGF 3
F++ GTVL+ +V+ DR +GRSRGFGF
Sbjct: 200 FSEQGTVLDAKVIYDRESGRSRGFGF 225
Score = 82.0 bits (201), Expect = 3e-13
Identities = 41/85 (48%), Positives = 52/85 (61%)
Frame = -2
Query: 452 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 273
DS KL+VGNL++ VD+ L LF E G V +VIYDR +GRSRGFGFVT + E
Sbjct: 177 DSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNN 236
Query: 272 AFERFNGYELDGRALRVNSGPPPPK 198
A +G +LDGR +RV P+
Sbjct: 237 AISNLDGVDLDGRQIRVTVAESKPR 261
>gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indica Group]
Length = 259
Score = 187 bits (474), Expect = 6e-45
Identities = 90/146 (61%), Positives = 112/146 (76%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
K+FVGNL ++VDS QLAGLF++AG V MVEV+YDR TGRSRGFGFVTM+T E A E+
Sbjct: 76 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 135
Query: 260 FNGYELDGRALRVNSGPPPPKDFSSPRGSPREXXXXXDSENRIFVGNLPWSADDLSLQQL 81
FNGY GR LRVNSGPPPP+D +PR SPR DS N+++VGNL W D+ +L+ L
Sbjct: 136 FNGYTFQGRPLRVNSGPPPPRDDFAPR-SPRGGGSNFDSSNKLYVGNLAWGVDNSTLENL 194
Query: 80 FNDYGTVLNTRVVTDRATGRSRGFGF 3
F++ GTVL+ +V+ DR +GRSRGFGF
Sbjct: 195 FSEQGTVLDAKVIYDRESGRSRGFGF 220
Score = 82.0 bits (201), Expect = 3e-13
Identities = 41/85 (48%), Positives = 52/85 (61%)
Frame = -2
Query: 452 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 273
DS KL+VGNL++ VD+ L LF E G V +VIYDR +GRSRGFGFVT + E
Sbjct: 172 DSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNN 231
Query: 272 AFERFNGYELDGRALRVNSGPPPPK 198
A +G +LDGR +RV P+
Sbjct: 232 AISNLDGVDLDGRQIRVTVAESKPR 256
>dbj|BAJ86334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 186 bits (473), Expect = 7e-45
Identities = 93/154 (60%), Positives = 113/154 (73%), Gaps = 8/154 (5%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
++FVGNL ++VDS QLAGLF++AG V MVEVIYD+ TGRSRGFGFVTM+T E + A ER
Sbjct: 75 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 134
Query: 260 FNGYELDGRALRVNSGPPPPKDFSSPRG--------SPREXXXXXDSENRIFVGNLPWSA 105
NGY LDGRAL+VNSGPPPPKD SSPRG + +NR++VGNL W+
Sbjct: 135 LNGYVLDGRALKVNSGPPPPKDQSSPRGFREQSGGFRQQSSRGPSGGDNRVYVGNLSWNV 194
Query: 104 DDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGF 3
DD +L LFN+ G+VL RV+ DR +GRSRGFGF
Sbjct: 195 DDSALANLFNEQGSVLGARVIYDRESGRSRGFGF 228
Score = 79.3 bits (194), Expect = 2e-12
Identities = 38/73 (52%), Positives = 49/73 (67%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
+++VGNLS+NVD LA LF E G V VIYDR +GRSRGFGFVT T + + A
Sbjct: 184 RVYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRESGRSRGFGFVTYGTSDEVQKAVSN 243
Query: 260 FNGYELDGRALRV 222
+G ++DGR +RV
Sbjct: 244 LDGTDMDGRQIRV 256
>ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 277
Score = 182 bits (463), Expect = 1e-43
Identities = 93/150 (62%), Positives = 110/150 (73%), Gaps = 4/150 (2%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
KLFVGNL + VDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVTM++ + + A +
Sbjct: 88 KLFVGNLPFTVDSAQLAELFEGAGNVEMVEVIYDKTTGRSRGFGFVTMSSAQEVEAAARQ 147
Query: 260 FNGYELDGRALRVNSGPPPPKDFSSPR----GSPREXXXXXDSENRIFVGNLPWSADDLS 93
FNGYELDGRALRVN GPPPP+ S R GSPR DS NR++VGNL W D+L+
Sbjct: 148 FNGYELDGRALRVNYGPPPPRTEDSFRGARGGSPRGGGGYGDSSNRLYVGNLAWGVDNLA 207
Query: 92 LQQLFNDYGTVLNTRVVTDRATGRSRGFGF 3
L+ LFN+ G VL +VV DR +GRSRGFGF
Sbjct: 208 LENLFNEQGKVLEAKVVFDRDSGRSRGFGF 237
Score = 82.4 bits (202), Expect = 2e-13
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = -2
Query: 452 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 273
DS +L+VGNL++ VD+ L LF E G+V +V++DR +GRSRGFGFVT + E +
Sbjct: 189 DSSNRLYVGNLAWGVDNLALENLFNEQGKVLEAKVVFDRDSGRSRGFGFVTYGSAEEMNS 248
Query: 272 AFERFNGYELDGRALRVNSGPPPP 201
A E +G +L GR++RV + P P
Sbjct: 249 AIESLDGVDLGGRSIRVTAAEPRP 272
>ref|XP_003557886.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
[Brachypodium distachyon]
Length = 272
Score = 181 bits (459), Expect = 3e-43
Identities = 89/155 (57%), Positives = 112/155 (72%), Gaps = 9/155 (5%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
++FVGNL ++VDS QLAGLF++AG V MVEVIYD+ TGRSRGFGFVTM+T E + A E+
Sbjct: 78 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVEQ 137
Query: 260 FNGYELDGRALRVNSGPPPPKDFSSPRG---------SPREXXXXXDSENRIFVGNLPWS 108
NGY LDGR ++VNSGPPPP+D SSPRG + +NR++VGNL W+
Sbjct: 138 LNGYVLDGRTIKVNSGPPPPRDQSSPRGFREQSSGGFRQQSSRGPSGGDNRVYVGNLSWN 197
Query: 107 ADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGF 3
DD +L LFN+ G+VL RV+ DR +GRSRGFGF
Sbjct: 198 VDDSALANLFNEQGSVLGARVIYDRESGRSRGFGF 232
Score = 79.7 bits (195), Expect = 1e-12
Identities = 39/73 (53%), Positives = 49/73 (67%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
+++VGNLS+NVD LA LF E G V VIYDR +GRSRGFGFVT + E + A
Sbjct: 188 RVYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRESGRSRGFGFVTYGSSEEVEKAVSN 247
Query: 260 FNGYELDGRALRV 222
+G +LDGR +RV
Sbjct: 248 LDGTDLDGRQIRV 260
>ref|XP_006658862.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like, partial
[Oryza brachyantha]
Length = 211
Score = 180 bits (457), Expect = 5e-43
Identities = 87/146 (59%), Positives = 109/146 (74%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
K+FVGNL ++VDS QLAGLF++AG V MVEV+YDR TGRSRGFGFVTM++ E A E+
Sbjct: 28 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSSSEEAGAAVEQ 87
Query: 260 FNGYELDGRALRVNSGPPPPKDFSSPRGSPREXXXXXDSENRIFVGNLPWSADDLSLQQL 81
FNGY GR LRVNSGPPP +D SPR PR DS N+++VGNL W D+ +L+ L
Sbjct: 88 FNGYTFQGRPLRVNSGPPPARDEFSPR-PPRGGGNNFDSSNKVYVGNLSWGVDNSTLENL 146
Query: 80 FNDYGTVLNTRVVTDRATGRSRGFGF 3
F++ G VL+ +V+ DR +GRSRGFGF
Sbjct: 147 FSEQGNVLDAKVIYDRESGRSRGFGF 172
Score = 82.0 bits (201), Expect = 3e-13
Identities = 41/85 (48%), Positives = 52/85 (61%)
Frame = -2
Query: 452 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 273
DS K++VGNLS+ VD+ L LF E G V +VIYDR +GRSRGFGFVT + E
Sbjct: 124 DSSNKVYVGNLSWGVDNSTLENLFSEQGNVLDAKVIYDRESGRSRGFGFVTYGSAEEVTN 183
Query: 272 AFERFNGYELDGRALRVNSGPPPPK 198
A +G +LDGR +RV P+
Sbjct: 184 AISNLDGVDLDGRQIRVTVAESKPR 208
>ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [Amborella trichopoda]
gi|548849631|gb|ERN08390.1| hypothetical protein
AMTR_s00148p00072380 [Amborella trichopoda]
Length = 272
Score = 179 bits (455), Expect = 9e-43
Identities = 90/151 (59%), Positives = 113/151 (74%), Gaps = 5/151 (3%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
KLFVGNL ++VDS +LA LF++AG V MVEVIYD+ TGRSRGFGFVTM+T E + A ++
Sbjct: 85 KLFVGNLPFSVDSARLAELFEQAGNVEMVEVIYDKQTGRSRGFGFVTMSTVEEVEAAVQQ 144
Query: 260 FNGYELDGRALRVNSGPPPPKDFSSPRG-----SPREXXXXXDSENRIFVGNLPWSADDL 96
FNG++ +GR LRVNSGPPP +D SPRG SPR DS NR++VGNL W DDL
Sbjct: 145 FNGHDFEGRQLRVNSGPPPARDEMSPRGSRGFDSPR--PRSFDSPNRVYVGNLSWGVDDL 202
Query: 95 SLQQLFNDYGTVLNTRVVTDRATGRSRGFGF 3
+L+ LF++ G V+ +VV DR +GRSRGFGF
Sbjct: 203 ALENLFSEQGKVMEAKVVYDRESGRSRGFGF 233
Score = 86.3 bits (212), Expect = 1e-14
Identities = 43/93 (46%), Positives = 57/93 (61%)
Frame = -2
Query: 476 NEPSPVMDDSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTM 297
+ P P DS +++VGNLS+ VD L LF E G+V +V+YDR +GRSRGFGFVT
Sbjct: 177 DSPRPRSFDSPNRVYVGNLSWGVDDLALENLFSEQGKVMEAKVVYDRESGRSRGFGFVTY 236
Query: 296 ATEEGCKTAFERFNGYELDGRALRVNSGPPPPK 198
+T E +A NG +LDGR +RV P+
Sbjct: 237 STAEEVTSAISTLNGADLDGRPIRVTPAEAKPR 269
>ref|XP_004958419.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Setaria
italica]
Length = 265
Score = 179 bits (454), Expect = 1e-42
Identities = 89/149 (59%), Positives = 112/149 (75%), Gaps = 3/149 (2%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
KLFVGNL ++VDS QLAGLF++AG V MVEV+YDR TGRSRGFGFVTM++ E A E+
Sbjct: 79 KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAGAAVEQ 138
Query: 260 FNGYELDGRALRVNSGPPPPKDFSSPRGSPR---EXXXXXDSENRIFVGNLPWSADDLSL 90
FNGY GR LRVNSGPPPP+D S+PR +PR DS N+++VGNL W D+ +L
Sbjct: 139 FNGYTFQGRPLRVNSGPPPPRDDSAPR-APRGGGGGGNFVDSGNKVYVGNLSWGVDNSTL 197
Query: 89 QQLFNDYGTVLNTRVVTDRATGRSRGFGF 3
+ LF++ G VL+ +V+ DR +GRSRGFGF
Sbjct: 198 ENLFSEQGQVLDAKVIYDRESGRSRGFGF 226
Score = 85.5 bits (210), Expect = 2e-14
Identities = 42/85 (49%), Positives = 54/85 (63%)
Frame = -2
Query: 452 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 273
DSG K++VGNLS+ VD+ L LF E G+V +VIYDR +GRSRGFGFVT + E
Sbjct: 178 DSGNKVYVGNLSWGVDNSTLENLFSEQGQVLDAKVIYDRESGRSRGFGFVTYGSAEEVNN 237
Query: 272 AFERFNGYELDGRALRVNSGPPPPK 198
A +G +LDGR +RV P+
Sbjct: 238 AISNLDGIDLDGRQIRVTVAESKPR 262
>ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein
[Populus trichocarpa]
Length = 273
Score = 179 bits (454), Expect = 1e-42
Identities = 92/146 (63%), Positives = 111/146 (76%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
KLFVGNL +NVDS +LAGLF+ AG V MVEVIYD+ TGRSRGFGFVTM T E + A ++
Sbjct: 91 KLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVEAASKQ 150
Query: 260 FNGYELDGRALRVNSGPPPPKDFSSPRGSPREXXXXXDSENRIFVGNLPWSADDLSLQQL 81
FNGYELDGR LRVN GPPP K+ S RG PR DS NR++VGNL W+ D+L+L+ L
Sbjct: 151 FNGYELDGRTLRVNFGPPPQKESSFSRG-PR-GGETFDSGNRVYVGNLSWNVDNLALETL 208
Query: 80 FNDYGTVLNTRVVTDRATGRSRGFGF 3
F + G V++ +VV DR +GRSRGFGF
Sbjct: 209 FREKGRVMDAKVVYDRDSGRSRGFGF 234
Score = 90.1 bits (222), Expect = 9e-16
Identities = 44/85 (51%), Positives = 59/85 (69%)
Frame = -2
Query: 452 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 273
DSG +++VGNLS+NVD+ L LF+E G V +V+YDR +GRSRGFGFVT ++ E
Sbjct: 186 DSGNRVYVGNLSWNVDNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFVTYSSAEEVDN 245
Query: 272 AFERFNGYELDGRALRVNSGPPPPK 198
A + NG ELDGRA+RV+ P+
Sbjct: 246 AIDSLNGAELDGRAIRVSVAEAKPR 270
>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|568855826|ref|XP_006481497.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like [Citrus
sinensis] gi|557530828|gb|ESR42011.1| hypothetical
protein CICLE_v10012331mg [Citrus clementina]
Length = 282
Score = 178 bits (452), Expect = 2e-42
Identities = 93/149 (62%), Positives = 112/149 (75%), Gaps = 3/149 (2%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
KLFVGNL ++VDS QLAGLF+ AG V MVEVIYD+ TGRSRGFGFVTM++ E + A ++
Sbjct: 95 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQ 154
Query: 260 FNGYELDGRALRVNSGPPPP-KDFSSPRGSPREXXXXXDSE--NRIFVGNLPWSADDLSL 90
FNGYEL+GR LRVNSGPPPP ++ SPRG PR S NR++VGNL W DDL+L
Sbjct: 155 FNGYELEGRPLRVNSGPPPPRREEFSPRG-PRGGGAGAPSSGGNRVYVGNLSWGVDDLAL 213
Query: 89 QQLFNDYGTVLNTRVVTDRATGRSRGFGF 3
+ LF + G VL +VV DR +GRSRGFGF
Sbjct: 214 ETLFREQGKVLEAKVVYDRESGRSRGFGF 242
Score = 79.3 bits (194), Expect = 2e-12
Identities = 39/83 (46%), Positives = 55/83 (66%)
Frame = -2
Query: 446 GYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAF 267
G +++VGNLS+ VD L LF+E G+V +V+YDR +GRSRGFGFVT ++ E A
Sbjct: 196 GNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 255
Query: 266 ERFNGYELDGRALRVNSGPPPPK 198
+ NG +L GRA+RV+ P+
Sbjct: 256 DSLNGVDLAGRAIRVSVAEARPQ 278
>ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530827|gb|ESR42010.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 266
Score = 178 bits (452), Expect = 2e-42
Identities = 93/149 (62%), Positives = 112/149 (75%), Gaps = 3/149 (2%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
KLFVGNL ++VDS QLAGLF+ AG V MVEVIYD+ TGRSRGFGFVTM++ E + A ++
Sbjct: 95 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQ 154
Query: 260 FNGYELDGRALRVNSGPPPP-KDFSSPRGSPREXXXXXDSE--NRIFVGNLPWSADDLSL 90
FNGYEL+GR LRVNSGPPPP ++ SPRG PR S NR++VGNL W DDL+L
Sbjct: 155 FNGYELEGRPLRVNSGPPPPRREEFSPRG-PRGGGAGAPSSGGNRVYVGNLSWGVDDLAL 213
Query: 89 QQLFNDYGTVLNTRVVTDRATGRSRGFGF 3
+ LF + G VL +VV DR +GRSRGFGF
Sbjct: 214 ETLFREQGKVLEAKVVYDRESGRSRGFGF 242
Score = 68.2 bits (165), Expect = 4e-09
Identities = 34/71 (47%), Positives = 46/71 (64%)
Frame = -2
Query: 446 GYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAF 267
G +++VGNLS+ VD L LF+E G+V +V+YDR +GRSRGFGFVT ++ E A
Sbjct: 196 GNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 255
Query: 266 ERFNGYELDGR 234
+ NG GR
Sbjct: 256 DSLNGVVRFGR 266
>ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530826|gb|ESR42009.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 263
Score = 178 bits (452), Expect = 2e-42
Identities = 93/149 (62%), Positives = 112/149 (75%), Gaps = 3/149 (2%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
KLFVGNL ++VDS QLAGLF+ AG V MVEVIYD+ TGRSRGFGFVTM++ E + A ++
Sbjct: 95 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQ 154
Query: 260 FNGYELDGRALRVNSGPPPP-KDFSSPRGSPREXXXXXDSE--NRIFVGNLPWSADDLSL 90
FNGYEL+GR LRVNSGPPPP ++ SPRG PR S NR++VGNL W DDL+L
Sbjct: 155 FNGYELEGRPLRVNSGPPPPRREEFSPRG-PRGGGAGAPSSGGNRVYVGNLSWGVDDLAL 213
Query: 89 QQLFNDYGTVLNTRVVTDRATGRSRGFGF 3
+ LF + G VL +VV DR +GRSRGFGF
Sbjct: 214 ETLFREQGKVLEAKVVYDRESGRSRGFGF 242
Score = 68.2 bits (165), Expect = 4e-09
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = -2
Query: 446 GYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAF 267
G +++VGNLS+ VD L LF+E G+V +V+YDR +GRSRGFGFVT ++ E A
Sbjct: 196 GNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 255
Query: 266 ERFNGY 249
+ NG+
Sbjct: 256 DSLNGF 261
>ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530825|gb|ESR42008.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 271
Score = 178 bits (452), Expect = 2e-42
Identities = 93/149 (62%), Positives = 112/149 (75%), Gaps = 3/149 (2%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
KLFVGNL ++VDS QLAGLF+ AG V MVEVIYD+ TGRSRGFGFVTM++ E + A ++
Sbjct: 95 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQ 154
Query: 260 FNGYELDGRALRVNSGPPPP-KDFSSPRGSPREXXXXXDSE--NRIFVGNLPWSADDLSL 90
FNGYEL+GR LRVNSGPPPP ++ SPRG PR S NR++VGNL W DDL+L
Sbjct: 155 FNGYELEGRPLRVNSGPPPPRREEFSPRG-PRGGGAGAPSSGGNRVYVGNLSWGVDDLAL 213
Query: 89 QQLFNDYGTVLNTRVVTDRATGRSRGFGF 3
+ LF + G VL +VV DR +GRSRGFGF
Sbjct: 214 ETLFREQGKVLEAKVVYDRESGRSRGFGF 242
Score = 65.5 bits (158), Expect = 2e-08
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = -2
Query: 446 GYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAF 267
G +++VGNLS+ VD L LF+E G+V +V+YDR +GRSRGFGFVT ++ E
Sbjct: 196 GNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAE------ 249
Query: 266 ERFNGYELDGRALRVNSGPPPPK 198
+L GRA+RV+ P+
Sbjct: 250 -----EDLAGRAIRVSVAEARPQ 267
>ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530824|gb|ESR42007.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 297
Score = 178 bits (452), Expect = 2e-42
Identities = 93/149 (62%), Positives = 112/149 (75%), Gaps = 3/149 (2%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
KLFVGNL ++VDS QLAGLF+ AG V MVEVIYD+ TGRSRGFGFVTM++ E + A ++
Sbjct: 95 KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQ 154
Query: 260 FNGYELDGRALRVNSGPPPP-KDFSSPRGSPREXXXXXDSE--NRIFVGNLPWSADDLSL 90
FNGYEL+GR LRVNSGPPPP ++ SPRG PR S NR++VGNL W DDL+L
Sbjct: 155 FNGYELEGRPLRVNSGPPPPRREEFSPRG-PRGGGAGAPSSGGNRVYVGNLSWGVDDLAL 213
Query: 89 QQLFNDYGTVLNTRVVTDRATGRSRGFGF 3
+ LF + G VL +VV DR +GRSRGFGF
Sbjct: 214 ETLFREQGKVLEAKVVYDRESGRSRGFGF 242
Score = 67.0 bits (162), Expect = 8e-09
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = -2
Query: 446 GYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAF 267
G +++VGNLS+ VD L LF+E G+V +V+YDR +GRSRGFGFVT ++ E A
Sbjct: 196 GNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAI 255
Query: 266 ERFNG 252
+ NG
Sbjct: 256 DSLNG 260
>ref|NP_001151728.1| ribonucleoprotein A [Zea mays] gi|195649373|gb|ACG44154.1|
ribonucleoprotein A [Zea mays]
gi|414591006|tpg|DAA41577.1| TPA: ribonucleoprotein A
[Zea mays]
Length = 268
Score = 178 bits (452), Expect = 2e-42
Identities = 87/150 (58%), Positives = 110/150 (73%), Gaps = 4/150 (2%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
KLFVGNL ++VDS QLAGLF++AG V MVEV+YDR TGRSRGFGFVTM++ E + A E+
Sbjct: 80 KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAEAAVEQ 139
Query: 260 FNGYELDGRALRVNSGPPPPKDFSSPR----GSPREXXXXXDSENRIFVGNLPWSADDLS 93
FNGY GR LRVN GPPPP+D S+PR G DS N+++VGNL W D+ +
Sbjct: 140 FNGYAFQGRQLRVNCGPPPPRDESTPRAPRGGGGGGGGGFVDSANKVYVGNLAWGVDNST 199
Query: 92 LQQLFNDYGTVLNTRVVTDRATGRSRGFGF 3
L+ LF++ G VL+ +V+ DR +GRSRGFGF
Sbjct: 200 LENLFSEQGQVLDAKVIYDRDSGRSRGFGF 229
Score = 82.0 bits (201), Expect = 3e-13
Identities = 39/85 (45%), Positives = 54/85 (63%)
Frame = -2
Query: 452 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 273
DS K++VGNL++ VD+ L LF E G+V +VIYDR +GRSRGFGFVT + +
Sbjct: 181 DSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAQEVNN 240
Query: 272 AFERFNGYELDGRALRVNSGPPPPK 198
A +G +LDGR +RV + P+
Sbjct: 241 AISNLDGIDLDGRQIRVTAAESKPR 265
>gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica]
Length = 298
Score = 178 bits (451), Expect = 3e-42
Identities = 89/146 (60%), Positives = 109/146 (74%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
KLFVGNL ++VDS QLAGLF+ AG V MVEVIYD+ TGRSRGFGFVTM++ + + A +
Sbjct: 116 KLFVGNLPFSVDSAQLAGLFESAGNVEMVEVIYDKTTGRSRGFGFVTMSSVQEAEGAARQ 175
Query: 260 FNGYELDGRALRVNSGPPPPKDFSSPRGSPREXXXXXDSENRIFVGNLPWSADDLSLQQL 81
NGYELDGRALRVN GPPPP+ S RG+ DS NR++VGNL W D+L+L+ L
Sbjct: 176 LNGYELDGRALRVNYGPPPPRSEDSFRGA--RGGGGSDSSNRLYVGNLAWGVDNLALENL 233
Query: 80 FNDYGTVLNTRVVTDRATGRSRGFGF 3
F++ G VL +VV DR +GRSRGFGF
Sbjct: 234 FSEQGKVLEAKVVYDRDSGRSRGFGF 259
Score = 85.9 bits (211), Expect = 2e-14
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = -2
Query: 452 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 273
DS +L+VGNL++ VD+ L LF E G+V +V+YDR +GRSRGFGFVT T + +
Sbjct: 211 DSSNRLYVGNLAWGVDNLALENLFSEQGKVLEAKVVYDRDSGRSRGFGFVTYGTADEMNS 270
Query: 272 AFERFNGYELDGRALRVNSGPPPPK 198
A E +G +L+GR++RV + P P+
Sbjct: 271 AMESLDGVDLNGRSIRVTAAEPRPR 295
>ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29
kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 278
Score = 178 bits (451), Expect = 3e-42
Identities = 95/156 (60%), Positives = 111/156 (71%), Gaps = 5/156 (3%)
Frame = -2
Query: 455 DDSGY----KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATE 288
DDS Y KLFVGNL + VDS QLAGLF+ AG+V VEVIYD+ TGRSRGFGFVTM+T
Sbjct: 85 DDSSYAPDLKLFVGNLPFTVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSTV 144
Query: 287 EGCKTAFERFNGYELDGRALRVNSGPPPPK-DFSSPRGSPREXXXXXDSENRIFVGNLPW 111
+ A ++FNGYELDGR LRVN GPPPPK D SS RGS D+ NR+ V NL W
Sbjct: 145 GEVEAAAQQFNGYELDGRLLRVNYGPPPPKRDDSSFRGS--RNASRFDNRNRVHVSNLAW 202
Query: 110 SADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGF 3
DDL+L+ LF + G VL +VV DR +G+SRGFGF
Sbjct: 203 GVDDLTLENLFREKGNVLEAKVVYDRDSGKSRGFGF 238
Score = 73.2 bits (178), Expect = 1e-10
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 15/108 (13%)
Frame = -2
Query: 470 PSPVMDDSGYK-------------LFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPT 330
P P DDS ++ + V NL++ VD L LF+E G V +V+YDR +
Sbjct: 171 PPPKRDDSSFRGSRNASRFDNRNRVHVSNLAWGVDDLTLENLFREKGNVLEAKVVYDRDS 230
Query: 329 GRSRGFGFVTMATEEGCKTAFERFNGYELDGRALRVNSGP--PPPKDF 192
G+SRGFGFVT + E A + +G +LDGR +RV PP + F
Sbjct: 231 GKSRGFGFVTYNSAEEVNEAIQSLDGVDLDGRPIRVTQAEARPPRRQF 278
>ref|XP_003535181.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Glycine max]
Length = 275
Score = 177 bits (450), Expect = 3e-42
Identities = 91/151 (60%), Positives = 111/151 (73%), Gaps = 5/151 (3%)
Frame = -2
Query: 440 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 261
KLFVGNL +NVDS QLA LF+ AG V +VEVIYD+ TGRSRGFGFVTM++ E + A ++
Sbjct: 87 KLFVGNLPFNVDSAQLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAEAAAQQ 146
Query: 260 FNGYELDGRALRVNSGPPPPKDFSSPR---GSP--REXXXXXDSENRIFVGNLPWSADDL 96
FNGYELDGRALRVNSGPPP ++ S+PR GS DSENR+ V NL W D++
Sbjct: 147 FNGYELDGRALRVNSGPPPARNESAPRFRGGSSFGSRGGGPSDSENRVHVSNLAWGVDNV 206
Query: 95 SLQQLFNDYGTVLNTRVVTDRATGRSRGFGF 3
+L+ LF + G VL RV+ DR +GRSRGFGF
Sbjct: 207 ALKSLFREQGNVLEARVIYDRESGRSRGFGF 237
Score = 81.3 bits (199), Expect = 4e-13
Identities = 40/87 (45%), Positives = 56/87 (64%)
Frame = -2
Query: 452 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 273
DS ++ V NL++ VD+ L LF+E G V VIYDR +GRSRGFGFVT ++ + +
Sbjct: 189 DSENRVHVSNLAWGVDNVALKSLFREQGNVLEARVIYDRESGRSRGFGFVTFSSPDEVNS 248
Query: 272 AFERFNGYELDGRALRVNSGPPPPKDF 192
A + NG +L+GRA+RV+ PK F
Sbjct: 249 AIQSLNGVDLNGRAIRVSLADSKPKQF 275