BLASTX nr result

ID: Ephedra26_contig00000571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00000571
         (712 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17367.1| unknown [Picea sitchensis]                              92   2e-16
ref|XP_003539861.1| PREDICTED: uncharacterized protein LOC100776...    57   8e-06

>gb|ABR17367.1| unknown [Picea sitchensis]
          Length = 82

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 44/82 (53%), Positives = 55/82 (67%)
 Frame = +2

Query: 158 MASGNTWADQWDTSNDDQHNSNYTQNNGKPKDNGKMAKAKGVAVSGLEXXXXXXXXXXXX 337
           MASGN+WADQWD++N++++NSN   +  + K NGKMAK K VA+SGLE            
Sbjct: 1   MASGNSWADQWDSTNNEEYNSNSASDVRREKGNGKMAKVKVVALSGLEKAKIVASVGVQK 60

Query: 338 XXXGTSASIKWIKTQYRKRTSK 403
              GTS  IKWIK QY+KRTSK
Sbjct: 61  VKSGTSTGIKWIKNQYQKRTSK 82


>ref|XP_003539861.1| PREDICTED: uncharacterized protein LOC100776375 [Glycine max]
           gi|255647174|gb|ACU24055.1| unknown [Glycine max]
          Length = 85

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
 Frame = +2

Query: 161 ASGNTWADQWDTSN--DDQHNSNYTQNNGKPKDNGKMAKAKGVAVSGLEXXXXXXXXXXX 334
           + G +W+DQW +     D +         K   + KMA AK VA +G++           
Sbjct: 3   SKGPSWSDQWGSGGFGSDHYEEEEKMKMKKSGSSKKMADAKAVASAGMDKAKTAAVVGAQ 62

Query: 335 XXXXGTSASIKWIKTQYRKRTSK 403
               GTSA +KW+K QY+KRTSK
Sbjct: 63  KVKSGTSAGLKWVKNQYQKRTSK 85


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