BLASTX nr result
ID: Ephedra26_contig00000475
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra26_contig00000475 (1275 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK22487.1| unknown [Picea sitchensis] 85 7e-14 gb|AGQ45631.1| chloroplast-targeted copper chaperone [Hirschfeld... 60 3e-06 ref|XP_006409899.1| hypothetical protein EUTSA_v10017086mg [Eutr... 59 3e-06 ref|XP_006289860.1| hypothetical protein CARUB_v10003472mg [Caps... 58 7e-06 >gb|ABK22487.1| unknown [Picea sitchensis] Length = 215 Score = 84.7 bits (208), Expect = 7e-14 Identities = 60/145 (41%), Positives = 79/145 (54%), Gaps = 6/145 (4%) Frame = +3 Query: 858 RKSSSADHPPKAVLEQASLRGFSRRKSSADHRQNAVAGVDSDKSKRIIKNVESRKSSASI 1037 R+ S A P + +Q+ R RKS+ R NA D+S R+I+ Sbjct: 37 RQGSGAFEPSNVLPDQS--RRERPRKSTERRRSNA------DQSARVIEPSPRGIEQKPR 88 Query: 1038 VSANLSNNISLGRFSCSAIDQSAIVPFRPKNQILGHPGTPRISASAPVT----PRVSSSS 1205 S + ++ S+ RFSCSAIDQSAIVP++P P P+ +PV P SSSS Sbjct: 89 RSTHRRSSNSISRFSCSAIDQSAIVPYQP-------PPVPKPVKKSPVVINDHPASSSSS 141 Query: 1206 PD--KIVALRVSLHCQGCAGKVRKH 1274 D ++V LRVSLHCQGCAGKV+KH Sbjct: 142 TDATEVVVLRVSLHCQGCAGKVKKH 166 Score = 61.2 bits (147), Expect = 9e-07 Identities = 33/46 (71%), Positives = 37/46 (80%) Frame = +3 Query: 396 MKMIDIFCASPASTAICLNIHQRSLVRQGSRIFENARLLEKQESTA 533 MK IDIFCASPASTAICL++ QRSLVRQGS+ RLLE+Q S A Sbjct: 1 MKAIDIFCASPASTAICLSLEQRSLVRQGSQ----TRLLERQGSGA 42 >gb|AGQ45631.1| chloroplast-targeted copper chaperone [Hirschfeldia incana] Length = 265 Score = 59.7 bits (143), Expect = 3e-06 Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 10/178 (5%) Frame = +3 Query: 771 GAARIDEHRRRSNTNNSDQPASGGFQEGGRKSSSADHPPKAVLEQASLRGFSRRKSSADH 950 G +D RRR N NN+ + F + P + + S RK + H Sbjct: 30 GRRSVDSLRRRQNPNNNRDKTAPCF---ASEMPFIPIPRPTMSCRNSFESSCGRKIAMAH 86 Query: 951 ------RQNAVAGVDSDKSKRIIKNVESRKSSASIVSANLSNNISLGRFSCSAIDQSA-I 1109 R+ + A V SD +R +++ SS ++ + S+ S+ D+S + Sbjct: 87 GGDVQTRRKSSADV-SDVLRRSRSSLQGSSSSRYLLKDHKSSREDDKDLWLSSSDRSKDL 145 Query: 1110 VPFRPKNQILGHPGTPRISASAPVTPRVS---SSSPDKIVALRVSLHCQGCAGKVRKH 1274 +PFR +N + S+S+ VT S S+ D++V LRVS+HC+GC GKVRKH Sbjct: 146 IPFRDRNVTSSSSSSTSSSSSSSVTNGSSPTPSTDDDQVVVLRVSIHCKGCEGKVRKH 203 >ref|XP_006409899.1| hypothetical protein EUTSA_v10017086mg [Eutrema salsugineum] gi|557111068|gb|ESQ51352.1| hypothetical protein EUTSA_v10017086mg [Eutrema salsugineum] Length = 267 Score = 59.3 bits (142), Expect = 3e-06 Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 14/182 (7%) Frame = +3 Query: 771 GAARIDEHRRRSNTNNSDQPASGGFQEGGRKSSSADHPPKAVLEQASLRGFSRRKSSADH 950 G ++ HRRR N NN+ F P + RRK ++ H Sbjct: 30 GRRSVESHRRRQNPNNNKNKTVPCFTSE-MPFIPIPRPTMSCRNSFESSSGFRRKITSPH 88 Query: 951 RQNAVAGVDSDKSKRIIKNVESRKSSASIVSANLSNNISLGRFSC----------SAIDQ 1100 G D ++ +V K S+S + +LS+ L S+ D+ Sbjct: 89 ------GGDFQLRRKSSADVSDLKRSSSSLHGSLSSRYLLKDHKSFKEGDKDLWLSSSDR 142 Query: 1101 SA-IVPFRPKNQILGHPGTPRISASAPVTPRVSSSSP---DKIVALRVSLHCQGCAGKVR 1268 S +V FR +N + S+S+ VSS +P D++V LRVS+HC+GC GKVR Sbjct: 143 SKDLVIFRDRNVTSSSSSSSSSSSSSSSVTNVSSPAPSTDDQVVVLRVSIHCKGCEGKVR 202 Query: 1269 KH 1274 KH Sbjct: 203 KH 204 >ref|XP_006289860.1| hypothetical protein CARUB_v10003472mg [Capsella rubella] gi|482558566|gb|EOA22758.1| hypothetical protein CARUB_v10003472mg [Capsella rubella] Length = 320 Score = 58.2 bits (139), Expect = 7e-06 Identities = 25/43 (58%), Positives = 34/43 (79%) Frame = +3 Query: 1146 PGTPRISASAPVTPRVSSSSPDKIVALRVSLHCQGCAGKVRKH 1274 P +P S+S P+ P+ +SS D++V LRVSLHC+GCAGKV+KH Sbjct: 228 PPSPPQSSSPPLPPQEKNSSSDQVVVLRVSLHCKGCAGKVKKH 270