BLASTX nr result

ID: Ephedra26_contig00000169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00000169
         (573 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003579617.1| PREDICTED: uncharacterized protein LOC100837...    74   3e-11
dbj|BAJ88360.1| predicted protein [Hordeum vulgare subsp. vulgare]     73   5e-11
ref|XP_006653331.1| PREDICTED: mediator of RNA polymerase II tra...    71   2e-10
ref|XP_006436855.1| hypothetical protein CICLE_v10032864mg [Citr...    71   2e-10
gb|EOY22497.1| Uncharacterized protein isoform 1 [Theobroma cacao]     70   3e-10
ref|XP_004291292.1| PREDICTED: mediator of RNA polymerase II tra...    70   3e-10
ref|NP_568973.1| uncharacterized protein [Arabidopsis thaliana] ...    70   3e-10
ref|XP_003522437.2| PREDICTED: mediator of RNA polymerase II tra...    70   4e-10
gb|AAM62832.1| unknown [Arabidopsis thaliana]                          70   5e-10
ref|XP_004501709.1| PREDICTED: mediator of RNA polymerase II tra...    69   7e-10
gb|AFK48728.1| unknown [Medicago truncatula]                           69   7e-10
dbj|BAD43384.1| unknown protein [Arabidopsis thaliana]                 69   9e-10
ref|XP_002864848.1| hypothetical protein ARALYDRAFT_496535 [Arab...    69   9e-10
ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264...    69   9e-10
ref|XP_004138044.1| PREDICTED: mediator of RNA polymerase II tra...    69   1e-09
ref|XP_006357075.1| PREDICTED: mediator of RNA polymerase II tra...    68   1e-09
ref|XP_006394273.1| hypothetical protein EUTSA_v10004987mg [Eutr...    68   1e-09
ref|XP_006846635.1| hypothetical protein AMTR_s00156p00059920 [A...    68   1e-09
ref|XP_004244509.1| PREDICTED: mediator of RNA polymerase II tra...    68   1e-09
ref|XP_006281191.1| hypothetical protein CARUB_v10027226mg [Caps...    68   2e-09

>ref|XP_003579617.1| PREDICTED: uncharacterized protein LOC100837441 [Brachypodium
           distachyon]
          Length = 177

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 41/89 (46%), Positives = 53/89 (59%)
 Frame = +1

Query: 1   ALEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXXXXXX 180
           +L+E+R RYK AV +LRA ISA+AP  Q           + + DQ E             
Sbjct: 92  SLDEARHRYKIAVAALRASISAVAPCAQELG------STEFKGDQAETEQLEERASALRK 145

Query: 181 XVKKKNQHLKVLIDQLRDLINDISMWQSP 267
            ++ KN+HLK+LIDQLR LI+DISMWQSP
Sbjct: 146 EIESKNKHLKLLIDQLRGLISDISMWQSP 174


>dbj|BAJ88360.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 177

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 41/89 (46%), Positives = 54/89 (60%)
 Frame = +1

Query: 1   ALEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXXXXXX 180
           +L+E+R RYK AV +LRA I+A++PS Q           + + DQ EI            
Sbjct: 92  SLDEARHRYKIAVAALRASIAAVSPSTQEPG------PTESKGDQAEIERLEEHASSLRK 145

Query: 181 XVKKKNQHLKVLIDQLRDLINDISMWQSP 267
            +  KN+ LK+LIDQLRDLI+DISMWQSP
Sbjct: 146 EIGSKNKQLKLLIDQLRDLISDISMWQSP 174


>ref|XP_006653331.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like, partial [Oryza brachyantha]
          Length = 99

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 39/89 (43%), Positives = 54/89 (60%)
 Frame = +1

Query: 1   ALEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXXXXXX 180
           +L+E+R RYK AV++LRA I+A++   Q     +   D      Q EI            
Sbjct: 14  SLDEARHRYKVAVSALRASIAAVSSCAQEMGSTEHSAD------QAEIERLEEHASSLRK 67

Query: 181 XVKKKNQHLKVLIDQLRDLINDISMWQSP 267
            ++ KN+H+K+LIDQLRDLI+DISMWQSP
Sbjct: 68  EIESKNKHVKLLIDQLRDLISDISMWQSP 96


>ref|XP_006436855.1| hypothetical protein CICLE_v10032864mg [Citrus clementina]
           gi|568880628|ref|XP_006493212.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 30-like [Citrus
           sinensis] gi|557539051|gb|ESR50095.1| hypothetical
           protein CICLE_v10032864mg [Citrus clementina]
          Length = 183

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
 Frame = +1

Query: 1   ALEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDV--RHDQDEIHXXXXXXXXX 174
           AL+E+R RYK +V +LRAV++AI  S + +S + V   VD   R D+ EI          
Sbjct: 90  ALDEARHRYKTSVAALRAVLTAIPNSHKAKSFEMVSSPVDSVSRSDEVEIDKLEERASLL 149

Query: 175 XXXVKKKNQHLKVLIDQLRDLINDISMWQSP 267
              +  KN++LK LIDQLRDLI DIS WQSP
Sbjct: 150 RKELANKNKYLKRLIDQLRDLITDISTWQSP 180


>gb|EOY22497.1| Uncharacterized protein isoform 1 [Theobroma cacao]
          Length = 198

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 41/89 (46%), Positives = 53/89 (59%)
 Frame = +1

Query: 1   ALEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXXXXXX 180
           AL+E+RLRYK +V SLRAV++AI P+ Q     +         D+ EI            
Sbjct: 108 ALDEARLRYKNSVASLRAVLAAI-PNSQKAKAFETGSTASSPADEAEIDKLEDQASNLRK 166

Query: 181 XVKKKNQHLKVLIDQLRDLINDISMWQSP 267
            +  KN++LK+LIDQLRDLI DIS WQSP
Sbjct: 167 ELANKNEYLKLLIDQLRDLITDISTWQSP 195


>ref|XP_004291292.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like [Fragaria vesca subsp. vesca]
          Length = 180

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 41/89 (46%), Positives = 54/89 (60%)
 Frame = +1

Query: 1   ALEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXXXXXX 180
           ALEE+R RYK +VT+LRAV++AI  S + +S      +     D+ E+            
Sbjct: 95  ALEEARFRYKNSVTALRAVLAAIPDSHKEKS------ETCSPADETEVEKLEEQASNLRK 148

Query: 181 XVKKKNQHLKVLIDQLRDLINDISMWQSP 267
            + KKN ++KVLIDQLRDLI DIS WQSP
Sbjct: 149 ELVKKNAYIKVLIDQLRDLITDISTWQSP 177


>ref|NP_568973.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75171739|sp|Q9FMV4.1|MED30_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           30 gi|9758289|dbj|BAB08813.1| unnamed protein product
           [Arabidopsis thaliana] gi|190886513|gb|ACE95179.1|
           At1g17730 [Arabidopsis thaliana]
           gi|332010374|gb|AED97757.1| uncharacterized protein
           AT5G63480 [Arabidopsis thaliana]
          Length = 189

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 39/88 (44%), Positives = 54/88 (61%)
 Frame = +1

Query: 4   LEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXXXXXXX 183
           L+E+ LRYK +VTSLRAV++AI P+ Q     +++  +     +DEI             
Sbjct: 100 LDEASLRYKNSVTSLRAVLAAI-PNSQKAKASEMQNGLGSPESEDEIEKLEEQALSLRME 158

Query: 184 VKKKNQHLKVLIDQLRDLINDISMWQSP 267
           + KKN H+K LID+LR+LI DIS WQSP
Sbjct: 159 IAKKNVHVKELIDKLRELIADISTWQSP 186


>ref|XP_003522437.2| PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like [Glycine max]
          Length = 174

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 41/89 (46%), Positives = 51/89 (57%)
 Frame = +1

Query: 1   ALEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXXXXXX 180
           ALEE+R RYK AVT+LR +++AI  S + ++ D          D+ EI            
Sbjct: 85  ALEEARARYKKAVTALRTILTAIPTSQKEKTFDAGSAASPA--DEAEIDKLEERASSLRR 142

Query: 181 XVKKKNQHLKVLIDQLRDLINDISMWQSP 267
            +  KN HLK LIDQLRDLI DIS WQSP
Sbjct: 143 ELANKNLHLKTLIDQLRDLITDISTWQSP 171


>gb|AAM62832.1| unknown [Arabidopsis thaliana]
          Length = 178

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 39/88 (44%), Positives = 54/88 (61%)
 Frame = +1

Query: 4   LEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXXXXXXX 183
           L+E+ LRYK +VTSLRAV++AI P+ Q     +++  +     +DEI             
Sbjct: 89  LDEASLRYKNSVTSLRAVLAAI-PNSQKAKASEMQNGLGSPEREDEIEKLEEEALSLRME 147

Query: 184 VKKKNQHLKVLIDQLRDLINDISMWQSP 267
           + KKN H+K LID+LR+LI DIS WQSP
Sbjct: 148 IAKKNVHVKELIDKLRELIADISTWQSP 175


>ref|XP_004501709.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like isoform X1 [Cicer arietinum]
           gi|502133278|ref|XP_004501710.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 30-like isoform
           X2 [Cicer arietinum]
          Length = 183

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 40/89 (44%), Positives = 50/89 (56%)
 Frame = +1

Query: 1   ALEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXXXXXX 180
           ALEE+R RYK AV  LR +++AI  S +  + D    D     D+ EI            
Sbjct: 94  ALEEARFRYKNAVAGLRTILAAIPNSQKVNTFDSGSADSPA--DEAEIEKLEERASSLRK 151

Query: 181 XVKKKNQHLKVLIDQLRDLINDISMWQSP 267
            +  KN HLK+LIDQLR+LI DIS WQSP
Sbjct: 152 ELVNKNLHLKILIDQLRELITDISTWQSP 180


>gb|AFK48728.1| unknown [Medicago truncatula]
          Length = 179

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 41/89 (46%), Positives = 52/89 (58%)
 Frame = +1

Query: 1   ALEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXXXXXX 180
           AL E+RLRYK AV  LR+V++AI  S +  + D    D  +  D+ EI            
Sbjct: 90  ALGEARLRYKDAVAGLRSVLAAIPNSQKANTFDGGSADSPM--DEAEIEKLEEQASSLRK 147

Query: 181 XVKKKNQHLKVLIDQLRDLINDISMWQSP 267
            +  KN HLK+LIDQLR+LI DIS WQSP
Sbjct: 148 ELGNKNLHLKILIDQLRELITDISTWQSP 176


>dbj|BAD43384.1| unknown protein [Arabidopsis thaliana]
          Length = 184

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 39/88 (44%), Positives = 53/88 (60%)
 Frame = +1

Query: 4   LEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXXXXXXX 183
           L+E+ LRYK +VTSLRAV++AI P+ Q     +++  +     +DEI             
Sbjct: 95  LDEASLRYKNSVTSLRAVLAAI-PNSQKAKASEMQNGLGSPESEDEIEKLEEQALSLRME 153

Query: 184 VKKKNQHLKVLIDQLRDLINDISMWQSP 267
           + KKN H+K LID LR+LI DIS WQSP
Sbjct: 154 IAKKNVHVKELIDILRELIADISTWQSP 181


>ref|XP_002864848.1| hypothetical protein ARALYDRAFT_496535 [Arabidopsis lyrata subsp.
           lyrata] gi|297310683|gb|EFH41107.1| hypothetical protein
           ARALYDRAFT_496535 [Arabidopsis lyrata subsp. lyrata]
          Length = 178

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 39/88 (44%), Positives = 52/88 (59%)
 Frame = +1

Query: 4   LEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXXXXXXX 183
           L+E+ LRYK +VTSLRAV++AI P+       ++E        +DEI             
Sbjct: 89  LDEASLRYKNSVTSLRAVLAAI-PNSHKAKASEMENGFGSPESEDEIEKLEEQALSLRME 147

Query: 184 VKKKNQHLKVLIDQLRDLINDISMWQSP 267
           + KKN H+K LID+LR+LI DIS WQSP
Sbjct: 148 IAKKNVHVKELIDKLRELIADISTWQSP 175


>ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264705 [Vitis vinifera]
           gi|147789866|emb|CAN73869.1| hypothetical protein
           VITISV_001275 [Vitis vinifera]
           gi|297734439|emb|CBI15686.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
 Frame = +1

Query: 1   ALEESRLRYKAAVTSLRAVISAIAPSLQNQSHD--DVEMDVDVRHDQDEIHXXXXXXXXX 174
           AL+++RLRYK++V SLRAV++AI  S + ++ +          + DQ EI          
Sbjct: 81  ALDDARLRYKSSVASLRAVLNAIQSSQKAKAFEASSAASGSASQADQAEIEKLEERASNL 140

Query: 175 XXXVKKKNQHLKVLIDQLRDLINDISMWQSP 267
              +  KN++LK+LIDQLRDLI DIS WQSP
Sbjct: 141 RKELADKNKYLKLLIDQLRDLITDISTWQSP 171


>ref|XP_004138044.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like [Cucumis sativus]
           gi|449532651|ref|XP_004173294.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 30-like [Cucumis
           sativus]
          Length = 198

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 37/89 (41%), Positives = 54/89 (60%)
 Frame = +1

Query: 1   ALEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXXXXXX 180
           ALEE+R+RYK +V +LRA+++AI  S + ++++          DQ EI            
Sbjct: 107 ALEEARVRYKNSVLALRAILAAIPNSQKAKAYESGTSGHASPADQSEIDKLEQHLSNLRK 166

Query: 181 XVKKKNQHLKVLIDQLRDLINDISMWQSP 267
            +  KN H+K+LIDQLRDL+ D+S WQSP
Sbjct: 167 ELVVKNLHIKLLIDQLRDLVADVSTWQSP 195


>ref|XP_006357075.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like isoform X1 [Solanum tuberosum]
           gi|565381437|ref|XP_006357076.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 30-like isoform
           X2 [Solanum tuberosum]
          Length = 198

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   ALEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRH-DQDEIHXXXXXXXXXX 177
           AL+ESRLRYK+++ SLR+V++AI+ S + ++ +       +   DQ EI           
Sbjct: 106 ALDESRLRYKSSIASLRSVLTAISNSQKAKALEAASASGSLSAADQAEIEQLEDRASSLK 165

Query: 178 XXVKKKNQHLKVLIDQLRDLINDISMWQSP 267
             +  KN+HLK+LIDQLRDL+ D+  WQSP
Sbjct: 166 KELVDKNKHLKLLIDQLRDLLADLCTWQSP 195


>ref|XP_006394273.1| hypothetical protein EUTSA_v10004987mg [Eutrema salsugineum]
           gi|557090912|gb|ESQ31559.1| hypothetical protein
           EUTSA_v10004987mg [Eutrema salsugineum]
          Length = 183

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 38/89 (42%), Positives = 54/89 (60%)
 Frame = +1

Query: 1   ALEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXXXXXX 180
           AL+E+ LRYK +VTSLRAV++AI  SL+ ++ +  E        ++EI            
Sbjct: 93  ALDEASLRYKNSVTSLRAVLAAIPNSLKTKAFE-TENGFGTPESEEEIEKLEEQALSLRK 151

Query: 181 XVKKKNQHLKVLIDQLRDLINDISMWQSP 267
            + K+N H+K LID+ R+LI DIS WQSP
Sbjct: 152 EIAKRNVHVKELIDKFRELIADISTWQSP 180


>ref|XP_006846635.1| hypothetical protein AMTR_s00156p00059920 [Amborella trichopoda]
           gi|548849487|gb|ERN08310.1| hypothetical protein
           AMTR_s00156p00059920 [Amborella trichopoda]
          Length = 158

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
 Frame = +1

Query: 1   ALEESRLRYKAAVTSLRAVISAIAPSLQN--QSHDDVEMDVDVRHDQDEIHXXXXXXXXX 174
           ALE++R RYK AV SLRAV+SAI  S     Q         D    + E+          
Sbjct: 65  ALEDARHRYKCAVASLRAVLSAIPTSHSEVPQGAGPTGSSPDTSGKKSELQSLEERAAYL 124

Query: 175 XXXVKKKNQHLKVLIDQLRDLINDISMWQSP 267
              +  KN+HLK++IDQLR+L+ D+SMWQSP
Sbjct: 125 RKELANKNKHLKLVIDQLRELVMDVSMWQSP 155


>ref|XP_004244509.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like [Solanum lycopersicum]
          Length = 198

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   ALEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRH-DQDEIHXXXXXXXXXX 177
           AL+ESRLRYK+++ SLR+V++AI+ S + ++ +       +   DQ EI           
Sbjct: 106 ALDESRLRYKSSIASLRSVLTAISNSQKAKALEAASASGSLSAADQAEIEQLEDRASSLK 165

Query: 178 XXVKKKNQHLKVLIDQLRDLINDISMWQSP 267
             +  KN+HLK+LIDQLRDL+ D+  WQSP
Sbjct: 166 KELVDKNKHLKLLIDQLRDLLADLCTWQSP 195


>ref|XP_006281191.1| hypothetical protein CARUB_v10027226mg [Capsella rubella]
           gi|482549895|gb|EOA14089.1| hypothetical protein
           CARUB_v10027226mg [Capsella rubella]
          Length = 177

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 38/89 (42%), Positives = 52/89 (58%)
 Frame = +1

Query: 1   ALEESRLRYKAAVTSLRAVISAIAPSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXXXXXX 180
           AL+E+ LRYK +VTSLRAV++AI P+ Q     + E  ++    +D I            
Sbjct: 87  ALDEASLRYKNSVTSLRAVLAAI-PNSQKPKASETENGLESPESEDGIENLEEQALSLRK 145

Query: 181 XVKKKNQHLKVLIDQLRDLINDISMWQSP 267
            + KKN H+K LID+ R+LI DIS W SP
Sbjct: 146 EIAKKNVHVKELIDKFRELIADISTWHSP 174


Top