BLASTX nr result

ID: Ephedra26_contig00000135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00000135
         (704 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                             105   1e-20

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score =  105 bits (263), Expect = 1e-20
 Identities = 70/223 (31%), Positives = 108/223 (48%), Gaps = 1/223 (0%)
 Frame = +3

Query: 39  SDGFSKLKDFVLAAASATEGMVTATEVKEFTRGTLKIMGSAHLIGAAXXXXXXXXEGREM 218
           S+ FSKLK+F+  A +  + ++   + K   RG L+ MG+AHL            E  E 
Sbjct: 125 SESFSKLKEFLSEATNFVKDIIPG-DAKTIVRGLLQGMGTAHLATTGLLVVANILERFED 183

Query: 219 ISKNQEECLDLLENMASLASHLSQISDRSTEYSQMGDCHLQDIIKECTESIMDGFDLIWS 398
           +S NQ+EC  +L+ M  LA  + QI +R     +M      D +K+ TE I++G     S
Sbjct: 184 VSDNQDECFHVLKEMIFLAKVVKQIKERPQLQQRM-----HDEVKDATELIVEGSIKCCS 238

Query: 399 TLTAAKTKRFLKARNXXXXXXXXXXXXDNKYRKLMGQIMIDLSSFAPNTRPH-DFEFPEE 575
            + +++   F                 D KY+ +  Q+ I++       + +    +PE 
Sbjct: 239 QMASSQFSNFFSTSVNKEELGEVAQQLDVKYKHIYIQMGIEIYDVGQCKKANLSRRYPEH 298

Query: 576 AVGLLDEVRTTINQMEWQGNDKALAVVLHGHRGSGKTTLGDAV 704
           AVGL +  R  I+ +EW     A+AV+LHG  G GKTTL DAV
Sbjct: 299 AVGLEESSREVIDLLEWGSQQNAVAVILHGFGGMGKTTLADAV 341


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