BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra26_contig00000125
         (930 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26111.1| unknown [Picea sitchensis] gi|116792769|gb|ABK264...    91   6e-16
gb|ABK22811.1| unknown [Picea sitchensis]                              91   6e-16
gb|ABK21316.1| unknown [Picea sitchensis] gi|116779793|gb|ABK214...    91   6e-16
gb|ACN39867.1| unknown [Picea sitchensis]                              88   5e-15
ref|NP_001147391.1| photosystem II core complex proteins psbY [Z...    88   5e-15
gb|AFK46434.1| unknown [Lotus japonicus]                               86   2e-14
ref|XP_002444967.1| hypothetical protein SORBIDRAFT_07g002060 [S...    86   3e-14
gb|AFW74395.1| hypothetical protein ZEAMMB73_053443, partial [Ze...    85   3e-14
gb|AFW61341.1| photosystem II core complex protein psbY [Zea mays]     85   3e-14
ref|NP_001147739.1| photosystem II core complex proteins psbY [Z...    85   3e-14
ref|NP_001147385.1| photosystem II core complex proteins psbY [Z...    85   3e-14
ref|XP_004972988.1| PREDICTED: photosystem II core complex prote...    84   1e-13
dbj|BAD09053.1| putative photosystem II core complex proteins ps...    83   2e-13
ref|NP_001060874.1| Os08g0119800 [Oryza sativa Japonica Group] g...    83   2e-13
dbj|BAJ98138.1| predicted protein [Hordeum vulgare subsp. vulgar...    82   4e-13
ref|NP_001235479.1| uncharacterized protein LOC100500004 [Glycin...    81   5e-13
ref|XP_003573314.1| PREDICTED: photosystem II core complex prote...    80   1e-12
ref|XP_002515034.1| photosystem II core complex proteins psbY, c...    80   1e-12
gb|ESW31624.1| hypothetical protein PHAVU_002G253700g [Phaseolus...    80   1e-12
ref|XP_004142959.1| PREDICTED: photosystem II core complex prote...    79   2e-12

>gb|ABK26111.1| unknown [Picea sitchensis] gi|116792769|gb|ABK26490.1| unknown
           [Picea sitchensis] gi|148906010|gb|ABR16165.1| unknown
           [Picea sitchensis] gi|148906227|gb|ABR16269.1| unknown
           [Picea sitchensis] gi|148907833|gb|ABR17041.1| unknown
           [Picea sitchensis] gi|148908345|gb|ABR17286.1| unknown
           [Picea sitchensis] gi|224285567|gb|ACN40502.1| unknown
           [Picea sitchensis]
          Length = 207

 Score = 90.9 bits (224), Expect = 6e-16
 Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 15/110 (13%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXX--------------GGAAAGVFSPYAEDAK 431
           D+RGTLLLL L PAI WVL                         G A    F    E+A 
Sbjct: 96  DSRGTLLLLPLVPAIAWVLYNILQPALNQINRMKGAGLVAFAGLGAAGGAAFLSNPEEAH 155

Query: 430 AQQALFDLAAEGSS-DGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRS 284
           A+Q +FDLAA+ ++ D RG L+ +V+ PA+GWVLFNILQPALNQ+N+MRS
Sbjct: 156 AEQLVFDLAAKAANNDNRGLLLLIVVIPAIGWVLFNILQPALNQINKMRS 205



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 34/64 (53%), Positives = 42/64 (65%)
 Frame = -3

Query: 478 GGAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQL 299
           G A  G  S   + A A Q + +LAA   SD RG L+ L L PA+ WVL+NILQPALNQ+
Sbjct: 70  GAALIGALSS-CDSAAAAQEVMELAA---SDSRGTLLLLPLVPAIAWVLYNILQPALNQI 125

Query: 298 NRMR 287
           NRM+
Sbjct: 126 NRMK 129


>gb|ABK22811.1| unknown [Picea sitchensis]
          Length = 206

 Score = 90.9 bits (224), Expect = 6e-16
 Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 15/110 (13%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXX--------------GGAAAGVFSPYAEDAK 431
           D+RGTLLLL L PAI WVL                         G A    F    E+A 
Sbjct: 96  DSRGTLLLLPLVPAIAWVLYNILQPALNQINRMKGAGLVAFAGLGAAGGAAFLSNPEEAH 155

Query: 430 AQQALFDLAAEGSS-DGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRS 284
           A+Q +FDLAA+ ++ D RG L+ +V+ PA+GWVLFNILQPALNQ+N+MRS
Sbjct: 156 AEQLVFDLAAKAANNDNRGLLLLIVVIPAIGWVLFNILQPALNQINKMRS 205



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 34/64 (53%), Positives = 42/64 (65%)
 Frame = -3

Query: 478 GGAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQL 299
           G A  G  S   + A A Q + +LAA   SD RG L+ L L PA+ WVL+NILQPALNQ+
Sbjct: 70  GAALIGALSS-CDSAAAAQEVMELAA---SDSRGTLLLLPLVPAIAWVLYNILQPALNQI 125

Query: 298 NRMR 287
           NRM+
Sbjct: 126 NRMK 129


>gb|ABK21316.1| unknown [Picea sitchensis] gi|116779793|gb|ABK21432.1| unknown
           [Picea sitchensis] gi|116780291|gb|ABK21621.1| unknown
           [Picea sitchensis] gi|116782013|gb|ABK22335.1| unknown
           [Picea sitchensis] gi|116782043|gb|ABK22345.1| unknown
           [Picea sitchensis] gi|116784459|gb|ABK23350.1| unknown
           [Picea sitchensis] gi|116791697|gb|ABK26075.1| unknown
           [Picea sitchensis] gi|116791715|gb|ABK26082.1| unknown
           [Picea sitchensis] gi|224285486|gb|ACN40464.1| unknown
           [Picea sitchensis] gi|224285621|gb|ACN40529.1| unknown
           [Picea sitchensis]
          Length = 206

 Score = 90.9 bits (224), Expect = 6e-16
 Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 15/110 (13%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXX--------------GGAAAGVFSPYAEDAK 431
           D+RGTLLLL L PAI WVL                         G A    F    E+A 
Sbjct: 96  DSRGTLLLLPLVPAIAWVLYNILQPALNQINRMKGAGLVAFAGLGAAGGAAFLSNPEEAH 155

Query: 430 AQQALFDLAAEGSS-DGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRS 284
           A+Q +FDLAA+ ++ D RG L+ +V+ PA+GWVLFNILQPALNQ+N+MRS
Sbjct: 156 AEQLVFDLAAKAANNDNRGLLLLIVVIPAIGWVLFNILQPALNQINKMRS 205



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 34/64 (53%), Positives = 42/64 (65%)
 Frame = -3

Query: 478 GGAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQL 299
           G A  G  S   + A A Q + +LAA   SD RG L+ L L PA+ WVL+NILQPALNQ+
Sbjct: 70  GAALIGALSS-CDSAAAAQEVMELAA---SDSRGTLLLLPLVPAIAWVLYNILQPALNQI 125

Query: 298 NRMR 287
           NRM+
Sbjct: 126 NRMK 129


>gb|ACN39867.1| unknown [Picea sitchensis]
          Length = 206

 Score = 87.8 bits (216), Expect = 5e-15
 Identities = 51/110 (46%), Positives = 64/110 (58%), Gaps = 15/110 (13%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXX--------------GGAAAGVFSPYAEDAK 431
           D+RGTLLLL L PAI WVL                         G A    F    E+A 
Sbjct: 96  DSRGTLLLLPLVPAIAWVLYNILQPALNQINRMKGAGLVAFAGLGAAGGAAFLSNPEEAH 155

Query: 430 AQQALFDLAAEGSS-DGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRS 284
           A+Q +FDLAA+ ++ D R  L+ +V+ PA+GWVLFNILQPALNQ+N+MRS
Sbjct: 156 AEQLVFDLAAKAANNDNRRLLLLIVVIPAIGWVLFNILQPALNQINKMRS 205



 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 34/64 (53%), Positives = 42/64 (65%)
 Frame = -3

Query: 478 GGAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQL 299
           G A  G  S     A AQ+ + +LAA   SD RG L+ L L PA+ WVL+NILQPALNQ+
Sbjct: 70  GAALIGALSSCDSTAAAQEVM-ELAA---SDSRGTLLLLPLVPAIAWVLYNILQPALNQI 125

Query: 298 NRMR 287
           NRM+
Sbjct: 126 NRMK 129


>ref|NP_001147391.1| photosystem II core complex proteins psbY [Zea mays]
           gi|195610958|gb|ACG27309.1| photosystem II core complex
           proteins psbY [Zea mays]
          Length = 176

 Score = 87.8 bits (216), Expect = 5e-15
 Identities = 53/112 (47%), Positives = 65/112 (58%), Gaps = 16/112 (14%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXX---------------GGAAAGVFSPYAEDA 434
           D+RG LLL+V+ PAIGWVL                          G AAAG+ +P    A
Sbjct: 65  DSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSSQAVAAGLGLGAAAAGMAAPPEASA 124

Query: 433 KAQQALFDLAAEG-SSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 281
              Q L  +AA   + D RG L+ +V+APA+GWVLFNILQPALNQLNRMRS+
Sbjct: 125 AVVQDLAAIAAAAPADDSRGLLLLIVVAPAIGWVLFNILQPALNQLNRMRSD 176



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 35/65 (53%), Positives = 43/65 (66%)
 Frame = -3

Query: 475 GAAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQLN 296
           G AA   +  A    A  A    AA+   D RG L+ +V+APA+GWVL+NILQPALNQLN
Sbjct: 36  GQAAKKAAVSASSPDAALADVVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLN 95

Query: 295 RMRSN 281
           RMRS+
Sbjct: 96  RMRSS 100


>gb|AFK46434.1| unknown [Lotus japonicus]
          Length = 205

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 54/114 (47%), Positives = 62/114 (54%), Gaps = 19/114 (16%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXX-----------------GGAAAGVFSPYAE 440
           DNRG  LLL L PAI WVL                            GG AAG    +A 
Sbjct: 91  DNRGLALLLPLIPAIVWVLFNILQPALNQINRMRNTKGVIVGLGLGLGGLAAGSGMLWAP 150

Query: 439 DAKAQQA--LFDLAAEGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRS 284
           +A A +   + D AA G SD RG L+  V+APA+GWVLFNILQPALNQ+NRMRS
Sbjct: 151 EASAGELGIIADAAAAGGSDNRGQLLLFVVAPAIGWVLFNILQPALNQINRMRS 204


>ref|XP_002444967.1| hypothetical protein SORBIDRAFT_07g002060 [Sorghum bicolor]
           gi|241941317|gb|EES14462.1| hypothetical protein
           SORBIDRAFT_07g002060 [Sorghum bicolor]
          Length = 203

 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 54/116 (46%), Positives = 66/116 (56%), Gaps = 20/116 (17%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXXG----------------GAAAGVFSPYAED 437
           DNRG LLL V+ PAIGWVL                              AAG+ SP   +
Sbjct: 90  DNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRSQAVVAGLGLGAAATAAGMASP--PE 147

Query: 436 AKAQQALFDLAAEGSS----DGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 281
           A A  ++ DLAA  ++    D RG L+ +V+APA+GWVLFNILQPALNQLNRMRS+
Sbjct: 148 ASAAASVQDLAALAAAAPADDSRGLLLLIVVAPAIGWVLFNILQPALNQLNRMRSD 203



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 36/63 (57%), Positives = 42/63 (66%)
 Frame = -3

Query: 472 AAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNR 293
           A AG F      + A  A    AA+  SD RG L+  V+APA+GWVL+NILQPALNQLNR
Sbjct: 62  ALAGAFFSALASSDAALADVAAAADAGSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNR 121

Query: 292 MRS 284
           MRS
Sbjct: 122 MRS 124


>gb|AFW74395.1| hypothetical protein ZEAMMB73_053443, partial [Zea mays]
          Length = 184

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 52/113 (46%), Positives = 64/113 (56%), Gaps = 17/113 (15%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXXG----------------GAAAGVFSPYAED 437
           D+RG LLL+V+ PAIGWVL                             AAAG+ +P    
Sbjct: 72  DSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSSQAVAAGLGLGAAAAAGMAAPPEAS 131

Query: 436 AKAQQALFDLAAEG-SSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 281
           A   Q L  +AA   + D RG L+ +V+APA+GWVLFNILQPALNQLNRMRS+
Sbjct: 132 AAVVQDLAAIAAAAPADDSRGLLLLIVVAPAIGWVLFNILQPALNQLNRMRSD 184



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 32/48 (66%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
 Frame = -3

Query: 421 ALFDLAA-EGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 281
           AL D+AA +   D RG L+ +V+APA+GWVL+NILQPALNQLNRMRS+
Sbjct: 60  ALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSS 107


>gb|AFW61341.1| photosystem II core complex protein psbY [Zea mays]
          Length = 196

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 54/116 (46%), Positives = 66/116 (56%), Gaps = 20/116 (17%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXX--------------GGAAAGVFS-PYAEDA 434
           DNRG LLL V+ PAIGWVL                         G AAAG+ + P A  A
Sbjct: 81  DNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRSQAVVAGLGLGAAAAGMAAAPEASAA 140

Query: 433 KAQQALFDLAAEGSS-----DGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 281
            A Q L  LAA  ++     D RG L+ +V+ PA+GWVLFNILQPALNQ+NRM+S+
Sbjct: 141 AAAQDLAALAAAAAAAAPADDNRGLLLLIVVTPAIGWVLFNILQPALNQINRMKSD 196



 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 38/66 (57%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
 Frame = -3

Query: 469 AAGVFSPYAED--AKAQQALFDLAA--EGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQ 302
           A   FS  A    A A Q + D+AA  +  SD RG L+  V+APA+GWVL+NILQPALNQ
Sbjct: 50  AGAFFSALASSDAALAAQRVADVAAAADSGSDNRGQLLLFVVAPAIGWVLYNILQPALNQ 109

Query: 301 LNRMRS 284
           LNRMRS
Sbjct: 110 LNRMRS 115


>ref|NP_001147739.1| photosystem II core complex proteins psbY [Zea mays]
           gi|195613400|gb|ACG28530.1| photosystem II core complex
           proteins psbY [Zea mays]
          Length = 196

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 54/116 (46%), Positives = 66/116 (56%), Gaps = 20/116 (17%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXX--------------GGAAAGVFS-PYAEDA 434
           DNRG LLL V+ PAIGWVL                         G AAAG+ + P A  A
Sbjct: 81  DNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRSQAVVAGLGLGAAAAGMAAAPEASAA 140

Query: 433 KAQQALFDLAAEGSS-----DGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 281
            A Q L  LAA  ++     D RG L+ +V+ PA+GWVLFNILQPALNQ+NRM+S+
Sbjct: 141 AAAQDLAALAAAAAAAAPADDNRGLLLLIVVTPAIGWVLFNILQPALNQINRMKSD 196



 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 38/66 (57%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
 Frame = -3

Query: 469 AAGVFSPYAED--AKAQQALFDLAA--EGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQ 302
           A   FS  A    A A Q + D+AA  +  SD RG L+  V+APA+GWVL+NILQPALNQ
Sbjct: 50  AGAFFSALASSDAALAAQRVADVAAAADAGSDNRGQLLLFVVAPAIGWVLYNILQPALNQ 109

Query: 301 LNRMRS 284
           LNRMRS
Sbjct: 110 LNRMRS 115


>ref|NP_001147385.1| photosystem II core complex proteins psbY [Zea mays]
           gi|195610810|gb|ACG27235.1| photosystem II core complex
           proteins psbY [Zea mays] gi|413941745|gb|AFW74394.1|
           photosystem II core complex protein psbY [Zea mays]
          Length = 191

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 52/113 (46%), Positives = 64/113 (56%), Gaps = 17/113 (15%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXXG----------------GAAAGVFSPYAED 437
           D+RG LLL+V+ PAIGWVL                             AAAG+ +P    
Sbjct: 79  DSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSSQAVAAGLGLGAAAAAGMAAPPEAS 138

Query: 436 AKAQQALFDLAAEG-SSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 281
           A   Q L  +AA   + D RG L+ +V+APA+GWVLFNILQPALNQLNRMRS+
Sbjct: 139 AAVVQDLAAIAAAAPADDSRGLLLLIVVAPAIGWVLFNILQPALNQLNRMRSD 191



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 32/48 (66%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
 Frame = -3

Query: 421 ALFDLAA-EGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 281
           AL D+AA +   D RG L+ +V+APA+GWVL+NILQPALNQLNRMRS+
Sbjct: 67  ALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSS 114


>ref|XP_004972988.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Setaria italica]
          Length = 197

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 53/114 (46%), Positives = 61/114 (53%), Gaps = 18/114 (15%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXX--------------GGAAAGVFSPYAEDAK 431
           DNRG LLL V+ PAIGWVL                         G AA       A +A 
Sbjct: 84  DNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRSQAVIAGVGLGAAATAAGMACAPEAS 143

Query: 430 AQ----QALFDLAAEGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 281
           A      AL   AA  + D RG L+ +V+APA+GWVLFNILQPALNQLNRMRS+
Sbjct: 144 AAVQDLAALAAAAAAPADDNRGLLLLIVVAPAIGWVLFNILQPALNQLNRMRSD 197



 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 34/55 (61%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
 Frame = -3

Query: 445 AEDAKAQQALFDLAA-EGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRS 284
           ++ A A Q + D+AA +  SD RG L+  V+APA+GWVL+NILQPALNQLNRMRS
Sbjct: 64  SDAALAAQRVADVAAADAGSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRS 118


>dbj|BAD09053.1| putative photosystem II core complex proteins psbY, chloroplast
           precursor (L-arginine metabolising enzyme) (L-AME)
           [Oryza sativa Japonica Group]
           gi|125559970|gb|EAZ05418.1| hypothetical protein
           OsI_27630 [Oryza sativa Indica Group]
           gi|215686966|dbj|BAG90836.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215695320|dbj|BAG90511.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765812|dbj|BAG87509.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 205

 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 51/114 (44%), Positives = 62/114 (54%), Gaps = 18/114 (15%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXXG--------------GAAAGVFSPYAEDAK 431
           DNRG  LLL + PAI WVL                          GAAAG    +  +A 
Sbjct: 92  DNRGLALLLPIAPAIAWVLYNILQPALNQLNRMRSEQVLVAGLGLGAAAGAGLAFPPEAS 151

Query: 430 AQQALFDLAAEGSS----DGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 281
           A Q +  LAAE ++    D RG L+  V+APA+ WVL+NILQPALNQLNRMRS+
Sbjct: 152 AAQEVARLAAEAAAAEGGDNRGLLLLFVVAPAIAWVLYNILQPALNQLNRMRSD 205



 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
 Frame = -3

Query: 469 AAGVFSPYA--EDAKAQQALFDLAAE--GSSDGRGGLIFLVLAPAVGWVLFNILQPALNQ 302
           A   FS  A  + A A Q + D+AA   G+ D RG  + L +APA+ WVL+NILQPALNQ
Sbjct: 61  AGAFFSALASTDAALAAQQIADVAAAAAGADDNRGLALLLPIAPAIAWVLYNILQPALNQ 120

Query: 301 LNRMRSN*KQIAEIQFG 251
           LNRMRS    +A +  G
Sbjct: 121 LNRMRSEQVLVAGLGLG 137


>ref|NP_001060874.1| Os08g0119800 [Oryza sativa Japonica Group]
           gi|113622843|dbj|BAF22788.1| Os08g0119800, partial
           [Oryza sativa Japonica Group]
          Length = 216

 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 51/114 (44%), Positives = 62/114 (54%), Gaps = 18/114 (15%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXXG--------------GAAAGVFSPYAEDAK 431
           DNRG  LLL + PAI WVL                          GAAAG    +  +A 
Sbjct: 103 DNRGLALLLPIAPAIAWVLYNILQPALNQLNRMRSEQVLVAGLGLGAAAGAGLAFPPEAS 162

Query: 430 AQQALFDLAAEGSS----DGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 281
           A Q +  LAAE ++    D RG L+  V+APA+ WVL+NILQPALNQLNRMRS+
Sbjct: 163 AAQEVARLAAEAAAAEGGDNRGLLLLFVVAPAIAWVLYNILQPALNQLNRMRSD 216



 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
 Frame = -3

Query: 469 AAGVFSPYA--EDAKAQQALFDLAAE--GSSDGRGGLIFLVLAPAVGWVLFNILQPALNQ 302
           A   FS  A  + A A Q + D+AA   G+ D RG  + L +APA+ WVL+NILQPALNQ
Sbjct: 72  AGAFFSALASTDAALAAQQIADVAAAAAGADDNRGLALLLPIAPAIAWVLYNILQPALNQ 131

Query: 301 LNRMRSN*KQIAEIQFG 251
           LNRMRS    +A +  G
Sbjct: 132 LNRMRSEQVLVAGLGLG 148


>dbj|BAJ98138.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326494406|dbj|BAJ90472.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326515886|dbj|BAJ87966.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 205

 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 53/113 (46%), Positives = 62/113 (54%), Gaps = 17/113 (15%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXX---------------GGAAAGVFSPYAEDA 434
           DNRG LLL V+ PA+GWVL                          G AAA   +   E A
Sbjct: 93  DNRGLLLLFVVAPALGWVLYNILQPALNQLNKMRSEKALVAGLGIGAAAAAGLAAVPEPA 152

Query: 433 KAQ-QALFDLAAEG-SSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 281
            A  Q L  LAA   + D RG L+  V+APA+GWVL+NILQPALNQLN+MRSN
Sbjct: 153 SAAVQELAALAAVAPADDNRGLLLLFVVAPALGWVLYNILQPALNQLNKMRSN 205



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = -3

Query: 445 AEDAKAQQALFDLAAEG-SSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQI 269
           ++ A A Q + D+AA   + D RG L+  V+APA+GWVL+NILQPALNQLN+MRS    +
Sbjct: 73  SDAAMASQRIADVAAAAPADDNRGLLLLFVVAPALGWVLYNILQPALNQLNKMRSEKALV 132

Query: 268 AEIQFG 251
           A +  G
Sbjct: 133 AGLGIG 138


>ref|NP_001235479.1| uncharacterized protein LOC100500004 [Glycine max]
           gi|255628451|gb|ACU14570.1| unknown [Glycine max]
          Length = 192

 Score = 81.3 bits (199), Expect = 5e-13
 Identities = 49/110 (44%), Positives = 59/110 (53%), Gaps = 15/110 (13%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXX---------------GGAAAGVFSPYAEDA 434
           DNRG  LLL + PAIGWVL                          GG A  V +P+A  A
Sbjct: 83  DNRGLALLLPIIPAIGWVLFNILQPALNQLNRMRSTKGVIIGLGLGGLAGLVAAPHASAA 142

Query: 433 KAQQALFDLAAEGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRS 284
            A +    +A   S+D RG L+  V+ PA+ WVL+NILQPALNQLNRMRS
Sbjct: 143 AASEVAA-MAEAASNDNRGQLLLFVVTPAIAWVLYNILQPALNQLNRMRS 191



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 35/76 (46%), Positives = 41/76 (53%)
 Frame = -3

Query: 472 AAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNR 293
           A AG          A  A+  +A     D RG  + L + PA+GWVLFNILQPALNQLNR
Sbjct: 55  AIAGAIFTTLGTCDAAFAVQQIADIAEGDNRGLALLLPIIPAIGWVLFNILQPALNQLNR 114

Query: 292 MRSN*KQIAEIQFGPL 245
           MRS    I  +  G L
Sbjct: 115 MRSTKGVIIGLGLGGL 130


>ref|XP_003573314.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Brachypodium distachyon]
          Length = 198

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 49/111 (44%), Positives = 60/111 (54%), Gaps = 15/111 (13%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXXG--------------GAAAGVFSPYAEDAK 431
           DNRG LLL+V++PA+ WVL                          GAA    +P    A 
Sbjct: 88  DNRGLLLLIVVSPALAWVLYNILQPALNQLNKMRSEKALVAGLGLGAAMAAAAPERASAA 147

Query: 430 AQQ-ALFDLAAEGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 281
           A + A    AA  + D RG L+  V+APA+GWVLFNILQPALNQL +MRSN
Sbjct: 148 AGEIAAMAAAAAPADDNRGLLLLFVVAPALGWVLFNILQPALNQLEKMRSN 198



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
 Frame = -3

Query: 469 AAGVFSPYA--EDAKAQQALFDLAAEG-SSDGRGGLIFLVLAPAVGWVLFNILQPALNQL 299
           A   FS  A  + A A Q + D+AA   + D RG L+ +V++PA+ WVL+NILQPALNQL
Sbjct: 58  AGAFFSSLATSDAAMAAQRVADMAAAAPADDNRGLLLLIVVSPALAWVLYNILQPALNQL 117

Query: 298 NRMRSN*KQIAEIQFG 251
           N+MRS    +A +  G
Sbjct: 118 NKMRSEKALVAGLGLG 133


>ref|XP_002515034.1| photosystem II core complex proteins psbY, chloroplast precursor
           [Ricinus communis] gi|223546085|gb|EEF47588.1|
           photosystem II core complex proteins psbY, chloroplast
           precursor [Ricinus communis]
          Length = 195

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 48/110 (43%), Positives = 61/110 (55%), Gaps = 15/110 (13%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXX---------------GGAAAGVFSPYAEDA 434
           DNRG  LLL + PA+GWVL                          GG AA  F   A +A
Sbjct: 86  DNRGLALLLPIIPALGWVLFNILRPALNQINRMRETKGVIIGLGLGGLAATGFMAAAPEA 145

Query: 433 KAQQALFDLAAEGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRS 284
            A + +  + A+ +SD RG L+  V+APA+ WVL+NILQPALNQ+NRMRS
Sbjct: 146 SASENIA-MIADAASDNRGQLLLFVVAPAILWVLYNILQPALNQINRMRS 194


>gb|ESW31624.1| hypothetical protein PHAVU_002G253700g [Phaseolus vulgaris]
          Length = 189

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 48/109 (44%), Positives = 58/109 (53%), Gaps = 14/109 (12%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXXG--------------GAAAGVFSPYAEDAK 431
           DNRG  LLL + PAIGWVL                          G  AG+ +     A 
Sbjct: 83  DNRGLALLLPIIPAIGWVLFNILQPALNQINRMRSTKGLIIGLGLGGLAGLMAAPPHAAA 142

Query: 430 AQQALFDLAAEGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRS 284
           A+ A     AE +SD RG L+  V+ PA+GWVL+NILQPALNQ+NRMRS
Sbjct: 143 AEVASI---AEAASDNRGQLLLFVVTPAIGWVLYNILQPALNQINRMRS 188



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 34/76 (44%), Positives = 41/76 (53%)
 Frame = -3

Query: 472 AAAGVFSPYAEDAKAQQALFDLAAEGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNR 293
           A AG          A  A+  +A     D RG  + L + PA+GWVLFNILQPALNQ+NR
Sbjct: 55  AVAGAIFTALGTCDAAFAVQQIADIAEGDNRGLALLLPIIPAIGWVLFNILQPALNQINR 114

Query: 292 MRSN*KQIAEIQFGPL 245
           MRS    I  +  G L
Sbjct: 115 MRSTKGLIIGLGLGGL 130


>ref|XP_004142959.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Cucumis sativus]
           gi|449494514|ref|XP_004159566.1| PREDICTED: photosystem
           II core complex proteins psbY, chloroplastic-like
           [Cucumis sativus]
          Length = 253

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 51/110 (46%), Positives = 58/110 (52%), Gaps = 15/110 (13%)
 Frame = -3

Query: 568 DNRGTLLLLVLTPAIGWVLXXXXXXXXXXX---------------GGAAAGVFSPYAEDA 434
           DNRG  LLL L PA+ WVL                          GG  A  F  YA DA
Sbjct: 145 DNRGLALLLPLIPAVAWVLFNILQPALNQINRMRSDKGVIIGLGLGGLTASGFM-YAPDA 203

Query: 433 KAQQALFDLAAEGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRS 284
            A +    +A   SSD RG L+  V+APA+ WVL+NILQPALNQLNRMRS
Sbjct: 204 SASEIAM-IADASSSDSRGQLLLFVVAPAILWVLYNILQPALNQLNRMRS 252



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 35/67 (52%), Positives = 45/67 (67%)
 Frame = -3

Query: 445 AEDAKAQQALFDLAAEGSSDGRGGLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIA 266
           ++ A A Q + ++AA+G  D RG  + L L PAV WVLFNILQPALNQ+NRMRS+   I 
Sbjct: 128 SDPAFAAQQIAEIAADG--DNRGLALLLPLIPAVAWVLFNILQPALNQINRMRSDKGVII 185

Query: 265 EIQFGPL 245
            +  G L
Sbjct: 186 GLGLGGL 192