BLASTX nr result
ID: Ephedra26_contig00000124
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00000124
(769 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001147391.1| photosystem II core complex proteins psbY [Z... 121 2e-25
gb|AFW61341.1| photosystem II core complex protein psbY [Zea mays] 120 7e-25
ref|NP_001147739.1| photosystem II core complex proteins psbY [Z... 120 7e-25
ref|NP_001235479.1| uncharacterized protein LOC100500004 [Glycin... 119 9e-25
gb|AFW74395.1| hypothetical protein ZEAMMB73_053443, partial [Ze... 119 1e-24
ref|XP_003601864.1| Photosystem II core complex proteins psbY [M... 119 1e-24
ref|NP_001147385.1| photosystem II core complex proteins psbY [Z... 119 1e-24
gb|AFK43145.1| unknown [Medicago truncatula] 119 1e-24
ref|XP_004972988.1| PREDICTED: photosystem II core complex prote... 118 2e-24
ref|XP_002444967.1| hypothetical protein SORBIDRAFT_07g002060 [S... 117 3e-24
gb|ABK26111.1| unknown [Picea sitchensis] gi|116792769|gb|ABK264... 117 4e-24
gb|ABK22811.1| unknown [Picea sitchensis] 117 4e-24
gb|ABK21316.1| unknown [Picea sitchensis] gi|116779793|gb|ABK214... 117 4e-24
gb|AFK46434.1| unknown [Lotus japonicus] 116 9e-24
ref|NP_001240940.1| uncharacterized protein LOC100779397 [Glycin... 116 9e-24
dbj|BAJ98138.1| predicted protein [Hordeum vulgare subsp. vulgar... 115 2e-23
ref|XP_002515034.1| photosystem II core complex proteins psbY, c... 115 2e-23
ref|XP_004142959.1| PREDICTED: photosystem II core complex prote... 114 3e-23
ref|XP_003573314.1| PREDICTED: photosystem II core complex prote... 114 4e-23
gb|ACN39867.1| unknown [Picea sitchensis] 114 4e-23
>ref|NP_001147391.1| photosystem II core complex proteins psbY [Zea mays]
gi|195610958|gb|ACG27309.1| photosystem II core complex
proteins psbY [Zea mays]
Length = 176
Score = 121 bits (304), Expect = 2e-25
Identities = 65/112 (58%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSPYAEDA 537
D+RG LLL+V+APAIGWVL+NIL+PALNQLNRMRS+++V G+ +P A
Sbjct: 65 DSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSSQAVAAGLGLGAAAAGMAAPPEASA 124
Query: 536 KAQQALFDLAAEG-SSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 384
Q L +AA + D RG L+ +V+APA+GWVLFNILQPALNQLNRMRS+
Sbjct: 125 AVVQDLAAIAAAAPADDSRGLLLLIVVAPAIGWVLFNILQPALNQLNRMRSD 176
Score = 66.6 bits (161), Expect = 9e-09
Identities = 33/52 (63%), Positives = 40/52 (76%)
Frame = -3
Query: 509 AAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVEIQLG 354
AA+ D RG L+ +V+APA+GWVL+NILQPALNQLNRMRS+ Q V LG
Sbjct: 59 AADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSS--QAVAAGLG 108
>gb|AFW61341.1| photosystem II core complex protein psbY [Zea mays]
Length = 196
Score = 120 bits (300), Expect = 7e-25
Identities = 65/116 (56%), Positives = 78/116 (67%), Gaps = 5/116 (4%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSPYAEDA 537
DNRG LLL V+APAIGWVL+NIL+PALNQLNRMRS V +P A A
Sbjct: 81 DNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRSQAVVAGLGLGAAAAGMAAAPEASAA 140
Query: 536 KAQQALFDLAAEGSS-----DGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 384
A Q L LAA ++ D RG L+ +V+ PA+GWVLFNILQPALNQ+NRM+S+
Sbjct: 141 AAAQDLAALAAAAAAAAPADDNRGLLLLIVVTPAIGWVLFNILQPALNQINRMKSD 196
Score = 68.2 bits (165), Expect = 3e-09
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
Frame = -3
Query: 548 AEDAKAQQALFDLAA--EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 387
++ A A Q + D+AA + SD RG L+ V+APA+GWVL+NILQPALNQLNRMRS
Sbjct: 60 SDAALAAQRVADVAAAADSGSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRS 115
>ref|NP_001147739.1| photosystem II core complex proteins psbY [Zea mays]
gi|195613400|gb|ACG28530.1| photosystem II core complex
proteins psbY [Zea mays]
Length = 196
Score = 120 bits (300), Expect = 7e-25
Identities = 65/116 (56%), Positives = 78/116 (67%), Gaps = 5/116 (4%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSPYAEDA 537
DNRG LLL V+APAIGWVL+NIL+PALNQLNRMRS V +P A A
Sbjct: 81 DNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRSQAVVAGLGLGAAAAGMAAAPEASAA 140
Query: 536 KAQQALFDLAAEGSS-----DGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 384
A Q L LAA ++ D RG L+ +V+ PA+GWVLFNILQPALNQ+NRM+S+
Sbjct: 141 AAAQDLAALAAAAAAAAPADDNRGLLLLIVVTPAIGWVLFNILQPALNQINRMKSD 196
Score = 68.2 bits (165), Expect = 3e-09
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
Frame = -3
Query: 548 AEDAKAQQALFDLAA--EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 387
++ A A Q + D+AA + SD RG L+ V+APA+GWVL+NILQPALNQLNRMRS
Sbjct: 60 SDAALAAQRVADVAAAADAGSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRS 115
>ref|NP_001235479.1| uncharacterized protein LOC100500004 [Glycine max]
gi|255628451|gb|ACU14570.1| unknown [Glycine max]
Length = 192
Score = 119 bits (299), Expect = 9e-25
Identities = 63/110 (57%), Positives = 75/110 (68%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSPYAEDA 537
DNRG LLL + PAIGWVLFNIL+PALNQLNRMRS K V V +P+A A
Sbjct: 83 DNRGLALLLPIIPAIGWVLFNILQPALNQLNRMRSTKGVIIGLGLGGLAGLVAAPHASAA 142
Query: 536 KAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 387
A + + +A S+D RG L+ V+ PA+ WVL+NILQPALNQLNRMRS
Sbjct: 143 AASE-VAAMAEAASNDNRGQLLLFVVTPAIAWVLYNILQPALNQLNRMRS 191
Score = 63.2 bits (152), Expect = 1e-07
Identities = 35/64 (54%), Positives = 42/64 (65%)
Frame = -3
Query: 539 AKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVEIQ 360
A A Q + D+A D RG + L + PA+GWVLFNILQPALNQLNRMRS I+ +
Sbjct: 70 AFAVQQIADIA---EGDNRGLALLLPIIPAIGWVLFNILQPALNQLNRMRSTKGVIIGLG 126
Query: 359 LGPL 348
LG L
Sbjct: 127 LGGL 130
>gb|AFW74395.1| hypothetical protein ZEAMMB73_053443, partial [Zea mays]
Length = 184
Score = 119 bits (297), Expect = 1e-24
Identities = 64/113 (56%), Positives = 79/113 (69%), Gaps = 2/113 (1%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFS--PYAE 543
D+RG LLL+V+APAIGWVL+NIL+PALNQLNRMRS+++V + P A
Sbjct: 72 DSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSSQAVAAGLGLGAAAAAGMAAPPEAS 131
Query: 542 DAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 384
A Q AA + D RG L+ +V+APA+GWVLFNILQPALNQLNRMRS+
Sbjct: 132 AAVVQDLAAIAAAAPADDSRGLLLLIVVAPAIGWVLFNILQPALNQLNRMRSD 184
Score = 67.0 bits (162), Expect = 7e-09
Identities = 36/58 (62%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = -3
Query: 524 ALFDLAA-EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVEIQLG 354
AL D+AA + D RG L+ +V+APA+GWVL+NILQPALNQLNRMRS+ Q V LG
Sbjct: 60 ALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSS--QAVAAGLG 115
>ref|XP_003601864.1| Photosystem II core complex proteins psbY [Medicago truncatula]
gi|355490912|gb|AES72115.1| Photosystem II core complex
proteins psbY [Medicago truncatula]
Length = 193
Score = 119 bits (297), Expect = 1e-24
Identities = 63/111 (56%), Positives = 79/111 (71%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSPYAEDA 537
DNRG+LLL V+APAIGWVLFNIL+PALNQ+NRMR+AK V +E +
Sbjct: 84 DNRGTLLLFVVAPAIGWVLFNILQPALNQINRMRNAKGVIVGLGLGLGGLAASGMVSEAS 143
Query: 536 KAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 384
++ L AA G SD RG+L+ V+APA+ WVL+NILQPALNQ+NRMRS+
Sbjct: 144 ASEIGLIADAAAG-SDNRGTLLLFVVAPAILWVLYNILQPALNQINRMRSD 193
Score = 65.1 bits (157), Expect = 3e-08
Identities = 36/70 (51%), Positives = 46/70 (65%)
Frame = -3
Query: 563 VFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 384
+FS A + A A +A D RG+L+ V+APA+GWVLFNILQPALNQ+NRMR+
Sbjct: 61 IFSSLAT-SDAAFAAQQIAEIAEGDNRGTLLLFVVAPAIGWVLFNILQPALNQINRMRNA 119
Query: 383 *KQIVEIQLG 354
IV + LG
Sbjct: 120 KGVIVGLGLG 129
>ref|NP_001147385.1| photosystem II core complex proteins psbY [Zea mays]
gi|195610810|gb|ACG27235.1| photosystem II core complex
proteins psbY [Zea mays] gi|413941745|gb|AFW74394.1|
photosystem II core complex protein psbY [Zea mays]
Length = 191
Score = 119 bits (297), Expect = 1e-24
Identities = 64/113 (56%), Positives = 79/113 (69%), Gaps = 2/113 (1%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFS--PYAE 543
D+RG LLL+V+APAIGWVL+NIL+PALNQLNRMRS+++V + P A
Sbjct: 79 DSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSSQAVAAGLGLGAAAAAGMAAPPEAS 138
Query: 542 DAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 384
A Q AA + D RG L+ +V+APA+GWVLFNILQPALNQLNRMRS+
Sbjct: 139 AAVVQDLAAIAAAAPADDSRGLLLLIVVAPAIGWVLFNILQPALNQLNRMRSD 191
Score = 67.0 bits (162), Expect = 7e-09
Identities = 36/58 (62%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = -3
Query: 524 ALFDLAA-EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVEIQLG 354
AL D+AA + D RG L+ +V+APA+GWVL+NILQPALNQLNRMRS+ Q V LG
Sbjct: 67 ALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRMRSS--QAVAAGLG 122
>gb|AFK43145.1| unknown [Medicago truncatula]
Length = 197
Score = 119 bits (297), Expect = 1e-24
Identities = 63/111 (56%), Positives = 79/111 (71%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSPYAEDA 537
DNRG+LLL V+APAIGWVLFNIL+PALNQ+NRMR+AK V +E +
Sbjct: 88 DNRGTLLLFVVAPAIGWVLFNILQPALNQINRMRNAKGVIVGLGLGLGGLAASGMVSEAS 147
Query: 536 KAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 384
++ L AA G SD RG+L+ V+APA+ WVL+NILQPALNQ+NRMRS+
Sbjct: 148 ASEIGLIADAAAG-SDNRGTLLLFVVAPAILWVLYNILQPALNQINRMRSD 197
Score = 65.1 bits (157), Expect = 3e-08
Identities = 36/70 (51%), Positives = 46/70 (65%)
Frame = -3
Query: 563 VFSPYAEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 384
+FS A + A A +A D RG+L+ V+APA+GWVLFNILQPALNQ+NRMR+
Sbjct: 65 IFSSLAT-SDAAFAAQQIAEIAEGDNRGTLLLFVVAPAIGWVLFNILQPALNQINRMRNA 123
Query: 383 *KQIVEIQLG 354
IV + LG
Sbjct: 124 KGVIVGLGLG 133
>ref|XP_004972988.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Setaria italica]
Length = 197
Score = 118 bits (295), Expect = 2e-24
Identities = 65/114 (57%), Positives = 78/114 (68%), Gaps = 3/114 (2%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSPYAEDA 537
DNRG LLL V+APAIGWVL+NIL+PALNQLNRMRS + + E +
Sbjct: 84 DNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRSQAVIAGVGLGAAATAAGMACAPEAS 143
Query: 536 KAQQALFDLAAEGSS---DGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 384
A Q L LAA ++ D RG L+ +V+APA+GWVLFNILQPALNQLNRMRS+
Sbjct: 144 AAVQDLAALAAAAAAPADDNRGLLLLIVVAPAIGWVLFNILQPALNQLNRMRSD 197
Score = 68.6 bits (166), Expect = 2e-09
Identities = 34/55 (61%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Frame = -3
Query: 548 AEDAKAQQALFDLAA-EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 387
++ A A Q + D+AA + SD RG L+ V+APA+GWVL+NILQPALNQLNRMRS
Sbjct: 64 SDAALAAQRVADVAAADAGSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRS 118
>ref|XP_002444967.1| hypothetical protein SORBIDRAFT_07g002060 [Sorghum bicolor]
gi|241941317|gb|EES14462.1| hypothetical protein
SORBIDRAFT_07g002060 [Sorghum bicolor]
Length = 203
Score = 117 bits (294), Expect = 3e-24
Identities = 67/114 (58%), Positives = 78/114 (68%), Gaps = 3/114 (2%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFS--PYAE 543
DNRG LLL V+APAIGWVL+NIL+PALNQLNRMRS V + P A
Sbjct: 90 DNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRSQAVVAGLGLGAAATAAGMASPPEAS 149
Query: 542 DAKAQQALFDLAAEG-SSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 384
A + Q L LAA + D RG L+ +V+APA+GWVLFNILQPALNQLNRMRS+
Sbjct: 150 AAASVQDLAALAAAAPADDSRGLLLLIVVAPAIGWVLFNILQPALNQLNRMRSD 203
Score = 68.6 bits (166), Expect = 2e-09
Identities = 34/53 (64%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Frame = -3
Query: 539 AKAQQALFDLAA--EGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 387
A + AL D+AA + SD RG L+ V+APA+GWVL+NILQPALNQLNRMRS
Sbjct: 72 ASSDAALADVAAAADAGSDNRGQLLLFVVAPAIGWVLYNILQPALNQLNRMRS 124
>gb|ABK26111.1| unknown [Picea sitchensis] gi|116792769|gb|ABK26490.1| unknown
[Picea sitchensis] gi|148906010|gb|ABR16165.1| unknown
[Picea sitchensis] gi|148906227|gb|ABR16269.1| unknown
[Picea sitchensis] gi|148907833|gb|ABR17041.1| unknown
[Picea sitchensis] gi|148908345|gb|ABR17286.1| unknown
[Picea sitchensis] gi|224285567|gb|ACN40502.1| unknown
[Picea sitchensis]
Length = 207
Score = 117 bits (293), Expect = 4e-24
Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 1/111 (0%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSPYAEDA 537
D+RG+LLLL L PAI WVL+NIL+PALNQ+NRM+ A V F E+A
Sbjct: 96 DSRGTLLLLPLVPAIAWVLYNILQPALNQINRMKGAGLVAFAGLGAAGGA-AFLSNPEEA 154
Query: 536 KAQQALFDLAAEGSS-DGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 387
A+Q +FDLAA+ ++ D RG L+ +V+ PA+GWVLFNILQPALNQ+N+MRS
Sbjct: 155 HAEQLVFDLAAKAANNDNRGLLLLIVVIPAIGWVLFNILQPALNQINKMRS 205
Score = 64.3 bits (155), Expect = 4e-08
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAK 606
DNRG LLL+V+ PAIGWVLFNIL+PALNQ+N+MRS K
Sbjct: 171 DNRGLLLLIVVIPAIGWVLFNILQPALNQINKMRSGK 207
Score = 61.6 bits (148), Expect = 3e-07
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = -3
Query: 545 EDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMR 390
+ A A Q + +LAA SD RG+L+ L L PA+ WVL+NILQPALNQ+NRM+
Sbjct: 81 DSAAAAQEVMELAA---SDSRGTLLLLPLVPAIAWVLYNILQPALNQINRMK 129
>gb|ABK22811.1| unknown [Picea sitchensis]
Length = 206
Score = 117 bits (293), Expect = 4e-24
Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 1/111 (0%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSPYAEDA 537
D+RG+LLLL L PAI WVL+NIL+PALNQ+NRM+ A V F E+A
Sbjct: 96 DSRGTLLLLPLVPAIAWVLYNILQPALNQINRMKGAGLVAFAGLGAAGGA-AFLSNPEEA 154
Query: 536 KAQQALFDLAAEGSS-DGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 387
A+Q +FDLAA+ ++ D RG L+ +V+ PA+GWVLFNILQPALNQ+N+MRS
Sbjct: 155 HAEQLVFDLAAKAANNDNRGLLLLIVVIPAIGWVLFNILQPALNQINKMRS 205
Score = 61.6 bits (148), Expect = 3e-07
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = -3
Query: 545 EDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMR 390
+ A A Q + +LAA SD RG+L+ L L PA+ WVL+NILQPALNQ+NRM+
Sbjct: 81 DSAAAAQEVMELAA---SDSRGTLLLLPLVPAIAWVLYNILQPALNQINRMK 129
>gb|ABK21316.1| unknown [Picea sitchensis] gi|116779793|gb|ABK21432.1| unknown
[Picea sitchensis] gi|116780291|gb|ABK21621.1| unknown
[Picea sitchensis] gi|116782013|gb|ABK22335.1| unknown
[Picea sitchensis] gi|116782043|gb|ABK22345.1| unknown
[Picea sitchensis] gi|116784459|gb|ABK23350.1| unknown
[Picea sitchensis] gi|116791697|gb|ABK26075.1| unknown
[Picea sitchensis] gi|116791715|gb|ABK26082.1| unknown
[Picea sitchensis] gi|224285486|gb|ACN40464.1| unknown
[Picea sitchensis] gi|224285621|gb|ACN40529.1| unknown
[Picea sitchensis]
Length = 206
Score = 117 bits (293), Expect = 4e-24
Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 1/111 (0%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSPYAEDA 537
D+RG+LLLL L PAI WVL+NIL+PALNQ+NRM+ A V F E+A
Sbjct: 96 DSRGTLLLLPLVPAIAWVLYNILQPALNQINRMKGAGLVAFAGLGAAGGA-AFLSNPEEA 154
Query: 536 KAQQALFDLAAEGSS-DGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 387
A+Q +FDLAA+ ++ D RG L+ +V+ PA+GWVLFNILQPALNQ+N+MRS
Sbjct: 155 HAEQLVFDLAAKAANNDNRGLLLLIVVIPAIGWVLFNILQPALNQINKMRS 205
Score = 61.6 bits (148), Expect = 3e-07
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = -3
Query: 545 EDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMR 390
+ A A Q + +LAA SD RG+L+ L L PA+ WVL+NILQPALNQ+NRM+
Sbjct: 81 DSAAAAQEVMELAA---SDSRGTLLLLPLVPAIAWVLYNILQPALNQINRMK 129
>gb|AFK46434.1| unknown [Lotus japonicus]
Length = 205
Score = 116 bits (290), Expect = 9e-24
Identities = 65/114 (57%), Positives = 76/114 (66%), Gaps = 4/114 (3%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSP--YAE 543
DNRG LLL L PAI WVLFNIL+PALNQ+NRMR+ K V S +A
Sbjct: 91 DNRGLALLLPLIPAIVWVLFNILQPALNQINRMRNTKGVIVGLGLGLGGLAAGSGMLWAP 150
Query: 542 DAKAQQA--LFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 387
+A A + + D AA G SD RG L+ V+APA+GWVLFNILQPALNQ+NRMRS
Sbjct: 151 EASAGELGIIADAAAAGGSDNRGQLLLFVVAPAIGWVLFNILQPALNQINRMRS 204
Score = 57.0 bits (136), Expect = 7e-06
Identities = 31/51 (60%), Positives = 36/51 (70%)
Frame = -3
Query: 506 AEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVEIQLG 354
AEG D RG + L L PA+ WVLFNILQPALNQ+NRMR+ IV + LG
Sbjct: 88 AEG--DNRGLALLLPLIPAIVWVLFNILQPALNQINRMRNTKGVIVGLGLG 136
>ref|NP_001240940.1| uncharacterized protein LOC100779397 [Glycine max]
gi|255646582|gb|ACU23765.1| unknown [Glycine max]
Length = 187
Score = 116 bits (290), Expect = 9e-24
Identities = 62/110 (56%), Positives = 73/110 (66%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSPYAEDA 537
DNRG LLL + PAIGWVLFNIL+PALNQLNRMRS K V +P+A A
Sbjct: 83 DNRGLALLLPIIPAIGWVLFNILQPALNQLNRMRSTKGVIIGLGLGGLAGLAAAPHAWAA 142
Query: 536 KAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 387
++ AA +SD RG L+ V+ PA+ WVL+NILQPALNQLNRMRS
Sbjct: 143 ASE------AAAAASDNRGQLLLFVVTPAIAWVLYNILQPALNQLNRMRS 186
Score = 63.2 bits (152), Expect = 1e-07
Identities = 35/64 (54%), Positives = 42/64 (65%)
Frame = -3
Query: 539 AKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVEIQ 360
A A Q + D+A D RG + L + PA+GWVLFNILQPALNQLNRMRS I+ +
Sbjct: 70 AFAVQQIADIA---EGDNRGLALLLPIIPAIGWVLFNILQPALNQLNRMRSTKGVIIGLG 126
Query: 359 LGPL 348
LG L
Sbjct: 127 LGGL 130
>dbj|BAJ98138.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326494406|dbj|BAJ90472.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326515886|dbj|BAJ87966.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 115 bits (288), Expect = 2e-23
Identities = 64/113 (56%), Positives = 78/113 (69%), Gaps = 2/113 (1%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSPYAEDA 537
DNRG LLL V+APA+GWVL+NIL+PALNQLN+MRS K++ + E A
Sbjct: 93 DNRGLLLLFVVAPALGWVLYNILQPALNQLNKMRSEKALVAGLGIGAAAAAGLAAVPEPA 152
Query: 536 KAQ-QALFDLAAEG-SSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 384
A Q L LAA + D RG L+ V+APA+GWVL+NILQPALNQLN+MRSN
Sbjct: 153 SAAVQELAALAAVAPADDNRGLLLLFVVAPALGWVLYNILQPALNQLNKMRSN 205
Score = 65.5 bits (158), Expect = 2e-08
Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = -3
Query: 548 AEDAKAQQALFDLAAEG-SSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQI 372
++ A A Q + D+AA + D RG L+ V+APA+GWVL+NILQPALNQLN+MRS +
Sbjct: 73 SDAAMASQRIADVAAAAPADDNRGLLLLFVVAPALGWVLYNILQPALNQLNKMRSEKALV 132
Query: 371 VEIQLG 354
+ +G
Sbjct: 133 AGLGIG 138
>ref|XP_002515034.1| photosystem II core complex proteins psbY, chloroplast precursor
[Ricinus communis] gi|223546085|gb|EEF47588.1|
photosystem II core complex proteins psbY, chloroplast
precursor [Ricinus communis]
Length = 195
Score = 115 bits (288), Expect = 2e-23
Identities = 60/110 (54%), Positives = 74/110 (67%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSPYAEDA 537
DNRG LLL + PA+GWVLFNILRPALNQ+NRMR K V F A +A
Sbjct: 86 DNRGLALLLPIIPALGWVLFNILRPALNQINRMRETKGVIIGLGLGGLAATGFMAAAPEA 145
Query: 536 KAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 387
A + + + A+ +SD RG L+ V+APA+ WVL+NILQPALNQ+NRMRS
Sbjct: 146 SASENI-AMIADAASDNRGQLLLFVVAPAILWVLYNILQPALNQINRMRS 194
Score = 57.8 bits (138), Expect = 4e-06
Identities = 31/66 (46%), Positives = 42/66 (63%)
Frame = -3
Query: 545 EDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIVE 366
+ A A Q + ++A D RG + L + PA+GWVLFNIL+PALNQ+NRMR I+
Sbjct: 71 DPAFAAQQIAEIA---EGDNRGLALLLPIIPALGWVLFNILRPALNQINRMRETKGVIIG 127
Query: 365 IQLGPL 348
+ LG L
Sbjct: 128 LGLGGL 133
>ref|XP_004142959.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Cucumis sativus]
gi|449494514|ref|XP_004159566.1| PREDICTED: photosystem
II core complex proteins psbY, chloroplastic-like
[Cucumis sativus]
Length = 253
Score = 114 bits (286), Expect = 3e-23
Identities = 64/110 (58%), Positives = 73/110 (66%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSPYAEDA 537
DNRG LLL L PA+ WVLFNIL+PALNQ+NRMRS K V F YA DA
Sbjct: 145 DNRGLALLLPLIPAVAWVLFNILQPALNQINRMRSDKGVIIGLGLGGLTASGFM-YAPDA 203
Query: 536 KAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 387
A + +A SSD RG L+ V+APA+ WVL+NILQPALNQLNRMRS
Sbjct: 204 SASEIAM-IADASSSDSRGQLLLFVVAPAILWVLYNILQPALNQLNRMRS 252
Score = 66.2 bits (160), Expect = 1e-08
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = -3
Query: 548 AEDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQIV 369
++ A A Q + ++AA+G D RG + L L PAV WVLFNILQPALNQ+NRMRS+ I+
Sbjct: 128 SDPAFAAQQIAEIAADG--DNRGLALLLPLIPAVAWVLFNILQPALNQINRMRSDKGVII 185
Query: 368 EIQLGPL 348
+ LG L
Sbjct: 186 GLGLGGL 192
>ref|XP_003573314.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Brachypodium distachyon]
Length = 198
Score = 114 bits (285), Expect = 4e-23
Identities = 59/111 (53%), Positives = 74/111 (66%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSPYAEDA 537
DNRG LLL+V++PA+ WVL+NIL+PALNQLN+MRS K++ A A
Sbjct: 88 DNRGLLLLIVVSPALAWVLYNILQPALNQLNKMRSEKALVAGLGLGAAMAAAAPERASAA 147
Query: 536 KAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN 384
+ A AA + D RG L+ V+APA+GWVLFNILQPALNQL +MRSN
Sbjct: 148 AGEIAAMAAAAAPADDNRGLLLLFVVAPALGWVLFNILQPALNQLEKMRSN 198
Score = 63.2 bits (152), Expect = 1e-07
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = -3
Query: 548 AEDAKAQQALFDLAAEG-SSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRSN*KQI 372
++ A A Q + D+AA + D RG L+ +V++PA+ WVL+NILQPALNQLN+MRS +
Sbjct: 68 SDAAMAAQRVADMAAAAPADDNRGLLLLIVVSPALAWVLYNILQPALNQLNKMRSEKALV 127
Query: 371 VEIQLG 354
+ LG
Sbjct: 128 AGLGLG 133
>gb|ACN39867.1| unknown [Picea sitchensis]
Length = 206
Score = 114 bits (285), Expect = 4e-23
Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
Frame = -3
Query: 716 DNRGSLLLLVLAPAIGWVLFNILRPALNQLNRMRSAKSVXXXXXXXXXXXGVFSPYAEDA 537
D+RG+LLLL L PAI WVL+NIL+PALNQ+NRM+ A + F E+A
Sbjct: 96 DSRGTLLLLPLVPAIAWVLYNILQPALNQINRMKGA-GLVAFAGLGAAGGAAFLSNPEEA 154
Query: 536 KAQQALFDLAAE-GSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMRS 387
A+Q +FDLAA+ ++D R L+ +V+ PA+GWVLFNILQPALNQ+N+MRS
Sbjct: 155 HAEQLVFDLAAKAANNDNRRLLLLIVVIPAIGWVLFNILQPALNQINKMRS 205
Score = 60.1 bits (144), Expect = 8e-07
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = -3
Query: 545 EDAKAQQALFDLAAEGSSDGRGSLIFLVLAPAVGWVLFNILQPALNQLNRMR 390
+ A Q + +LAA SD RG+L+ L L PA+ WVL+NILQPALNQ+NRM+
Sbjct: 81 DSTAAAQEVMELAA---SDSRGTLLLLPLVPAIAWVLYNILQPALNQINRMK 129