BLASTX nr result
ID: Ephedra26_contig00000117
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00000117
(945 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK22798.1| unknown [Picea sitchensis] 159 5e-73
gb|ABK25154.1| unknown [Picea sitchensis] 154 1e-67
gb|EMT32863.1| Chlorophyll a-b binding protein, chloroplastic [A... 166 2e-61
ref|XP_006646072.1| PREDICTED: chlorophyll a-b binding protein 2... 166 7e-61
ref|XP_003619167.1| Chlorophyll a-b binding protein 3C-like prot... 161 7e-61
emb|CBI28419.3| unnamed protein product [Vitis vinifera] 130 1e-51
gb|EMS67018.1| Chlorophyll a-b binding protein 25, chloroplastic... 126 1e-48
gb|ABW06954.1| chloroplast light-harvesting complex II protein p... 110 1e-42
emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta] 169 2e-39
emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta] 169 2e-39
ref|XP_003578597.1| PREDICTED: chlorophyll a-b binding protein 2... 168 3e-39
ref|XP_003578592.1| PREDICTED: chlorophyll a-b binding protein 2... 168 3e-39
gb|ADL41158.1| chloroplast light-harvesting chlorophyll a/b bind... 168 3e-39
dbj|BAJ93064.1| predicted protein [Hordeum vulgare subsp. vulgare] 168 3e-39
gb|ACN40194.1| unknown [Picea sitchensis] 168 3e-39
gb|ABK20976.1| unknown [Picea sitchensis] gi|116779697|gb|ABK213... 168 3e-39
gb|AAH53854.1| Unknown (protein for IMAGE:5194336), partial [Hom... 168 3e-39
gb|EMS51039.1| Chlorophyll a-b binding protein 3C, chloroplastic... 167 4e-39
gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein ... 167 4e-39
emb|CAA57409.1| light harvesting chlorophyll a /b-binding protei... 167 4e-39
>gb|ABK22798.1| unknown [Picea sitchensis]
Length = 253
Score = 159 bits (403), Expect(2) = 5e-73
Identities = 82/122 (67%), Positives = 87/122 (71%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDP 556
DYLGNPNL+HAQSILAIWA QVVLMG +E +FDPLGLADDP
Sbjct: 132 DYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDP 191
Query: 557 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVP 736
+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL DHL+DP VP
Sbjct: 192 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVP 251
Query: 737 GK 742
GK
Sbjct: 252 GK 253
Score = 142 bits (359), Expect(2) = 5e-73
Identities = 64/87 (73%), Positives = 76/87 (87%)
Frame = +1
Query: 34 VQRSSLSGAQFVARPNNDLTRRVGSSTARFTMRRTVKTAPQSIWYGPERPKWLGPFSEQT 213
+Q SSL+G + N+L ++VG+S AR TMRRTV++AP+SIWYGP+RPK+LGPFSEQT
Sbjct: 7 IQSSSLAGQTLLRPHQNELVKKVGASQARITMRRTVRSAPESIWYGPDRPKYLGPFSEQT 66
Query: 214 PSYLTGEFPGDYGWDTAGLSADPETFA 294
PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFA 93
>gb|ABK25154.1| unknown [Picea sitchensis]
Length = 240
Score = 154 bits (390), Expect(2) = 1e-67
Identities = 70/94 (74%), Positives = 83/94 (88%)
Frame = +1
Query: 34 VQRSSLSGAQFVARPNNDLTRRVGSSTARFTMRRTVKTAPQSIWYGPERPKWLGPFSEQT 213
+Q SSL+G + N+L ++VG+S AR TMRRTV++AP+SIWYGP+RPK+LGPFSEQT
Sbjct: 7 IQSSSLAGQTLLRPHQNELVKKVGASQARITMRRTVRSAPESIWYGPDRPKYLGPFSEQT 66
Query: 214 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEV 315
PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 100
Score = 129 bits (325), Expect(2) = 1e-67
Identities = 68/107 (63%), Positives = 72/107 (67%)
Frame = +2
Query: 422 AIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGR 601
AIWA QVVLMG +E +FDPLGLADDP+AFAELKVKEIKNGR
Sbjct: 134 AIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGR 193
Query: 602 LAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 742
LAMFSMFGFFVQAIVTGKGPIENL DHL+DP VPGK
Sbjct: 194 LAMFSMFGFFVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 240
>gb|EMT32863.1| Chlorophyll a-b binding protein, chloroplastic [Aegilops tauschii]
Length = 240
Score = 166 bits (420), Expect(2) = 2e-61
Identities = 85/122 (69%), Positives = 90/122 (73%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDP 556
DYLGNP+LVHAQSILAIWACQVVLMGAVE SFDPLGLADDP
Sbjct: 119 DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDP 178
Query: 557 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVP 736
+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADH++DP VP
Sbjct: 179 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVP 238
Query: 737 GK 742
GK
Sbjct: 239 GK 240
Score = 97.8 bits (242), Expect(2) = 2e-61
Identities = 51/93 (54%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
Frame = +1
Query: 46 SLSGAQFVARPNNDLTRRVGSSTARFTMRRTVKTAPQ----SIWYGPERPKWLGPFSEQT 213
SLS + + +L AR MR+T A Q S WY +R +LGP S +
Sbjct: 7 SLSSSYLAGKAVKNLPSSALIGEARVNMRKTAAKAKQVSSSSPWYRSDRVLYLGPLSGEP 66
Query: 214 PSYLTGEFPGDYGWDTAGLSADPETFARNRELE 312
PSYLTGEFPGDYGWDTAGLSADPETFA+NRELE
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 99
>ref|XP_006646072.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
[Oryza brachyantha]
Length = 237
Score = 166 bits (421), Expect(2) = 7e-61
Identities = 85/122 (69%), Positives = 90/122 (73%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDP 556
DYLGNP+L+HAQSILAIWACQVVLMGAVE SFDPLGLADDP
Sbjct: 116 DYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDP 175
Query: 557 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVP 736
+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHL+DP VP
Sbjct: 176 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 235
Query: 737 GK 742
GK
Sbjct: 236 GK 237
Score = 95.5 bits (236), Expect(2) = 7e-61
Identities = 46/68 (67%), Positives = 51/68 (75%), Gaps = 4/68 (5%)
Frame = +1
Query: 118 RFTMRRTVK----TAPQSIWYGPERPKWLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 285
R TMR+T A S WYG +R +LGP S + PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 26 RITMRKTAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 85
Query: 286 TFARNREL 309
TFA+NREL
Sbjct: 86 TFAKNREL 93
>ref|XP_003619167.1| Chlorophyll a-b binding protein 3C-like protein [Medicago
truncatula] gi|355494182|gb|AES75385.1| Chlorophyll a-b
binding protein 3C-like protein [Medicago truncatula]
Length = 229
Score = 161 bits (407), Expect(2) = 7e-61
Identities = 80/106 (75%), Positives = 85/106 (80%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDP 556
DYLGNP+LVHAQSILAIWACQV+LMGAVE SFDPLGLADDP
Sbjct: 108 DYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDP 167
Query: 557 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDP 694
+AF ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHL+DP
Sbjct: 168 EAFVELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 213
Score = 100 bits (250), Expect(2) = 7e-61
Identities = 45/60 (75%), Positives = 51/60 (85%)
Frame = +1
Query: 136 TVKTAPQSIWYGPERPKWLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEV 315
T K + S WYGP+R K+LGPF + PSYLTGEFPGDYGW+TAGLSADPETFA+NRELEV
Sbjct: 24 TKKVSSGSPWYGPDRVKYLGPFFGEAPSYLTGEFPGDYGWNTAGLSADPETFAKNRELEV 83
>emb|CBI28419.3| unnamed protein product [Vitis vinifera]
Length = 172
Score = 130 bits (328), Expect(2) = 1e-51
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = +1
Query: 127 MRRTVKTAPQSIWYGPERPKWLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 306
MRRTVK+ PQSIWYGP+RPK+LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 1 MRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
Query: 307 LEV 315
LEV
Sbjct: 61 LEV 63
Score = 100 bits (248), Expect(2) = 1e-51
Identities = 60/112 (53%), Positives = 61/112 (54%)
Frame = +2
Query: 407 AQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKE 586
A ILAIWACQVVLMG VE ELKVKE
Sbjct: 92 AVCILAIWACQVVLMGFVEGYR-------------------------------VELKVKE 120
Query: 587 IKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 742
IKNGRLAMFSMFGFFVQAIVTGKGPIENL DHL+DP VPGK
Sbjct: 121 IKNGRLAMFSMFGFFVQAIVTGKGPIENLVDHLADPVANNAWAYATNFVPGK 172
>gb|EMS67018.1| Chlorophyll a-b binding protein 25, chloroplastic [Triticum urartu]
Length = 167
Score = 126 bits (316), Expect(2) = 1e-48
Identities = 67/102 (65%), Positives = 70/102 (68%)
Frame = +2
Query: 437 QVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMFS 616
+VVLMGAVE SFDPLGLADDP+AFAELKVKEIKNGRLAMFS
Sbjct: 66 EVVLMGAVEGYHIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 125
Query: 617 MFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 742
MFGFFVQAIVTGKGP+ENLADHLSDP VPGK
Sbjct: 126 MFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 167
Score = 94.7 bits (234), Expect(2) = 1e-48
Identities = 46/67 (68%), Positives = 51/67 (76%), Gaps = 4/67 (5%)
Frame = +1
Query: 127 MRRTVKTAPQ----SIWYGPERPKWLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 294
MR+T A Q S WYG +R +LGP S + PSYLTGEFP DYGWDTAGLSADPETFA
Sbjct: 1 MRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPDDYGWDTAGLSADPETFA 60
Query: 295 RNRELEV 315
+NRELEV
Sbjct: 61 KNRELEV 67
>gb|ABW06954.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 545
Score = 110 bits (274), Expect(2) = 1e-42
Identities = 56/108 (51%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXS--FDPLGLAD 550
+YLGNP+L+HAQS++ + + +MGAVE FDPLGLA+
Sbjct: 423 NYLGNPSLIHAQSVVLTFLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLAN 482
Query: 551 DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDP 694
DPDA AELKVKE+KNGRLAM +M GF+VQ +VT GP+ENL HL+DP
Sbjct: 483 DPDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADP 530
Score = 90.9 bits (224), Expect(2) = 1e-42
Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 4/62 (6%)
Frame = +1
Query: 142 KTAPQSI----WYGPERPKWLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNREL 309
K+AP+S WYGP+R KWLGP + + PSYLTGE PGDYGWDTAGL +DP T AR RE
Sbjct: 321 KSAPKSDNLSQWYGPDRAKWLGPLTGEVPSYLTGELPGDYGWDTAGLGSDPTTLARYREA 380
Query: 310 EV 315
EV
Sbjct: 381 EV 382
Score = 110 bits (274), Expect = 1e-21
Identities = 56/108 (51%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXS--FDPLGLAD 550
+YLGNP+L+HAQS++ + + +MGAVE FDPLGLA+
Sbjct: 193 NYLGNPSLIHAQSVVLTFLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLAN 252
Query: 551 DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDP 694
DPDA AELKVKE+KNGRLAM +M GF+VQ +VT GP+ENL HL+DP
Sbjct: 253 DPDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADP 300
Score = 90.9 bits (224), Expect = 6e-16
Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 4/62 (6%)
Frame = +1
Query: 142 KTAPQSI----WYGPERPKWLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNREL 309
K+AP+S WYGP+R KWLGP + + PSYLTGE PGDYGWDTAGL +DP T AR RE
Sbjct: 86 KSAPKSDNLSQWYGPDRAKWLGPLTGEVPSYLTGELPGDYGWDTAGLGSDPTTLARYREA 145
Query: 310 EV 315
EV
Sbjct: 146 EV 147
Score = 89.4 bits (220), Expect = 2e-15
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = +2
Query: 527 FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDP 694
FDPLGLA+DPDA AELKVKE+KNGRLAM +M GF+VQ +VT GP+ENL HL+DP
Sbjct: 10 FDPLGLANDPDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADP 65
>emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 169 bits (427), Expect = 2e-39
Identities = 87/122 (71%), Positives = 90/122 (73%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDP 556
DYLGNP+LVHAQSILAIWACQV+LMGAVE SFDPLGLADDP
Sbjct: 153 DYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDP 212
Query: 557 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVP 736
DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHL+DP VP
Sbjct: 213 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVSNNAWAYATNFVP 272
Query: 737 GK 742
GK
Sbjct: 273 GK 274
Score = 104 bits (259), Expect = 6e-20
Identities = 53/89 (59%), Positives = 63/89 (70%), Gaps = 8/89 (8%)
Frame = +1
Query: 73 RPNNDLTRRVGSST---ARFTMRRTVK-----TAPQSIWYGPERPKWLGPFSEQTPSYLT 228
+P+ + VG+ AR TMR+ +A S WYGP+R +LGPFS + PSYLT
Sbjct: 20 KPHTNQLLGVGAGVHGEARVTMRKAATKKVSVSASTSPWYGPDRVLYLGPFSGEPPSYLT 79
Query: 229 GEFPGDYGWDTAGLSADPETFARNRELEV 315
GEFPGDYGWDTAGLSADPETFA+NRELEV
Sbjct: 80 GEFPGDYGWDTAGLSADPETFAKNRELEV 108
>emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 169 bits (427), Expect = 2e-39
Identities = 87/122 (71%), Positives = 90/122 (73%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDP 556
DYLGNP+LVHAQSILAIWACQV+LMGAVE SFDPLGLADDP
Sbjct: 153 DYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDP 212
Query: 557 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVP 736
DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHL+DP VP
Sbjct: 213 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVSNNAWAYATNFVP 272
Query: 737 GK 742
GK
Sbjct: 273 GK 274
Score = 104 bits (259), Expect = 6e-20
Identities = 53/89 (59%), Positives = 63/89 (70%), Gaps = 8/89 (8%)
Frame = +1
Query: 73 RPNNDLTRRVGSST---ARFTMRRTVK-----TAPQSIWYGPERPKWLGPFSEQTPSYLT 228
+P+ + VG+ AR TMR+ +A S WYGP+R +LGPFS + PSYLT
Sbjct: 20 KPHTNQLLGVGAGVHGEARVTMRKATTKKVSVSASTSPWYGPDRVLYLGPFSGEPPSYLT 79
Query: 229 GEFPGDYGWDTAGLSADPETFARNRELEV 315
GEFPGDYGWDTAGLSADPETFA+NRELEV
Sbjct: 80 GEFPGDYGWDTAGLSADPETFAKNRELEV 108
>ref|XP_003578597.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 6 [Brachypodium distachyon]
Length = 264
Score = 168 bits (425), Expect = 3e-39
Identities = 87/122 (71%), Positives = 90/122 (73%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDP 556
DYLGNP+LVHAQSILAIWACQVVLMGAVE SFDPLGLADDP
Sbjct: 143 DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDP 202
Query: 557 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVP 736
+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLSDP VP
Sbjct: 203 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVP 262
Query: 737 GK 742
GK
Sbjct: 263 GK 264
Score = 99.8 bits (247), Expect = 1e-18
Identities = 49/80 (61%), Positives = 57/80 (71%), Gaps = 4/80 (5%)
Frame = +1
Query: 88 LTRRVGSSTARFTMRRTVK----TAPQSIWYGPERPKWLGPFSEQTPSYLTGEFPGDYGW 255
++R R TMR+T +A S WYG +R +LGP S + PSYLTGEFPGDYGW
Sbjct: 19 VSRATPFGEGRITMRKTAAKPKVSASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGW 78
Query: 256 DTAGLSADPETFARNRELEV 315
DTAGLSADPETFA+NRELEV
Sbjct: 79 DTAGLSADPETFAKNRELEV 98
>ref|XP_003578592.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357159901|ref|XP_003578593.1| PREDICTED: chlorophyll
a-b binding protein 2, chloroplastic-like isoform 2
[Brachypodium distachyon]
gi|357159904|ref|XP_003578594.1| PREDICTED: chlorophyll
a-b binding protein 2, chloroplastic-like isoform 3
[Brachypodium distachyon]
gi|357159907|ref|XP_003578595.1| PREDICTED: chlorophyll
a-b binding protein 2, chloroplastic-like isoform 4
[Brachypodium distachyon]
gi|357159910|ref|XP_003578596.1| PREDICTED: chlorophyll
a-b binding protein 2, chloroplastic-like isoform 5
[Brachypodium distachyon]
Length = 265
Score = 168 bits (425), Expect = 3e-39
Identities = 87/122 (71%), Positives = 90/122 (73%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDP 556
DYLGNP+LVHAQSILAIWACQVVLMGAVE SFDPLGLADDP
Sbjct: 144 DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDP 203
Query: 557 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVP 736
+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLSDP VP
Sbjct: 204 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVP 263
Query: 737 GK 742
GK
Sbjct: 264 GK 265
Score = 99.8 bits (247), Expect = 1e-18
Identities = 49/80 (61%), Positives = 57/80 (71%), Gaps = 4/80 (5%)
Frame = +1
Query: 88 LTRRVGSSTARFTMRRTVK----TAPQSIWYGPERPKWLGPFSEQTPSYLTGEFPGDYGW 255
++R R TMR+T +A S WYG +R +LGP S + PSYLTGEFPGDYGW
Sbjct: 20 VSRATPFGEGRITMRKTAAKPKVSASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGW 79
Query: 256 DTAGLSADPETFARNRELEV 315
DTAGLSADPETFA+NRELEV
Sbjct: 80 DTAGLSADPETFAKNRELEV 99
>gb|ADL41158.1| chloroplast light-harvesting chlorophyll a/b binding protein
[Triticum aestivum]
Length = 266
Score = 168 bits (425), Expect = 3e-39
Identities = 87/122 (71%), Positives = 90/122 (73%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDP 556
DYLGNP+LVHAQSILAIWACQVVLMGAVE SFDPLGLADDP
Sbjct: 145 DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDP 204
Query: 557 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVP 736
+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLSDP VP
Sbjct: 205 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVP 264
Query: 737 GK 742
GK
Sbjct: 265 GK 266
Score = 103 bits (258), Expect = 7e-20
Identities = 54/94 (57%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Frame = +1
Query: 46 SLSGAQFVARPNNDLTRRVGSSTARFTMRRTVKTAPQ----SIWYGPERPKWLGPFSEQT 213
+LS + F + DL AR TMR+T A S WYG +R +LGP S
Sbjct: 7 ALSPSSFAGKAVKDLPSSALFGEARVTMRKTAAKAKPVSSGSPWYGSDRVLYLGPLSGDP 66
Query: 214 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEV 315
PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 100
>dbj|BAJ93064.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 168 bits (425), Expect = 3e-39
Identities = 87/122 (71%), Positives = 90/122 (73%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDP 556
DYLGNP+LVHAQSILAIWACQVVLMGAVE SFDPLGLADDP
Sbjct: 145 DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDP 204
Query: 557 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVP 736
+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLSDP VP
Sbjct: 205 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVP 264
Query: 737 GK 742
GK
Sbjct: 265 GK 266
Score = 103 bits (257), Expect = 1e-19
Identities = 54/94 (57%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Frame = +1
Query: 46 SLSGAQFVARPNNDLTRRVGSSTARFTMRRTVKTAPQ----SIWYGPERPKWLGPFSEQT 213
SLS F + +L AR TMR+T Q S WYG +R +LGP S +
Sbjct: 7 SLSSPAFAGKAVKNLPSSSLFGEARVTMRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEP 66
Query: 214 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEV 315
PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 100
>gb|ACN40194.1| unknown [Picea sitchensis]
Length = 274
Score = 168 bits (425), Expect = 3e-39
Identities = 86/122 (70%), Positives = 90/122 (73%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDP 556
DYLGNP+LVHAQSILAIWACQV+LMGAVE SFDPLGLADDP
Sbjct: 153 DYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP 212
Query: 557 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVP 736
DAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENLADHL+DP VP
Sbjct: 213 DAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVP 272
Query: 737 GK 742
GK
Sbjct: 273 GK 274
Score = 103 bits (258), Expect = 7e-20
Identities = 53/89 (59%), Positives = 65/89 (73%), Gaps = 8/89 (8%)
Frame = +1
Query: 73 RPNNDLTRRVGSST---ARFTMRRTVK-----TAPQSIWYGPERPKWLGPFSEQTPSYLT 228
+P+N+ VG+ AR TMR++ +A S WYGP+R +LGPFS + PS+LT
Sbjct: 20 KPHNNQLVGVGAGVHGEARVTMRKSSTKKVSASASTSPWYGPDRVLYLGPFSGEPPSHLT 79
Query: 229 GEFPGDYGWDTAGLSADPETFARNRELEV 315
GEFPGDYGWDTAGLSADPETFA+NRELEV
Sbjct: 80 GEFPGDYGWDTAGLSADPETFAKNRELEV 108
>gb|ABK20976.1| unknown [Picea sitchensis] gi|116779697|gb|ABK21395.1| unknown
[Picea sitchensis] gi|116790882|gb|ABK25775.1| unknown
[Picea sitchensis] gi|148908056|gb|ABR17147.1| unknown
[Picea sitchensis] gi|148908517|gb|ABR17370.1| unknown
[Picea sitchensis] gi|224284311|gb|ACN39891.1| unknown
[Picea sitchensis] gi|224284945|gb|ACN40202.1| unknown
[Picea sitchensis] gi|224285575|gb|ACN40506.1| unknown
[Picea sitchensis] gi|224285579|gb|ACN40508.1| unknown
[Picea sitchensis]
Length = 274
Score = 168 bits (425), Expect = 3e-39
Identities = 86/122 (70%), Positives = 90/122 (73%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDP 556
DYLGNP+LVHAQSILAIWACQV+LMGAVE SFDPLGLADDP
Sbjct: 153 DYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP 212
Query: 557 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVP 736
DAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENLADHL+DP VP
Sbjct: 213 DAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVP 272
Query: 737 GK 742
GK
Sbjct: 273 GK 274
Score = 105 bits (263), Expect = 2e-20
Identities = 54/89 (60%), Positives = 65/89 (73%), Gaps = 8/89 (8%)
Frame = +1
Query: 73 RPNNDLTRRVGSST---ARFTMRRTVK-----TAPQSIWYGPERPKWLGPFSEQTPSYLT 228
+P+N+ VG+ AR TMR++ +A S WYGP+R +LGPFS + PSYLT
Sbjct: 20 KPHNNQLVGVGAGVHGEARVTMRKSSTKKVSASASTSPWYGPDRVLYLGPFSGEPPSYLT 79
Query: 229 GEFPGDYGWDTAGLSADPETFARNRELEV 315
GEFPGDYGWDTAGLSADPETFA+NRELEV
Sbjct: 80 GEFPGDYGWDTAGLSADPETFAKNRELEV 108
>gb|AAH53854.1| Unknown (protein for IMAGE:5194336), partial [Homo sapiens]
gi|111494016|gb|AAI11385.1| Unknown (protein for
IMAGE:5198300), partial [Homo sapiens]
Length = 287
Score = 168 bits (425), Expect = 3e-39
Identities = 87/122 (71%), Positives = 90/122 (73%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDP 556
DYLGNP+LVHAQSILAIWACQVVLMGAVE SFDPLGLADDP
Sbjct: 166 DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDP 225
Query: 557 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVP 736
+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLSDP VP
Sbjct: 226 EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVP 285
Query: 737 GK 742
GK
Sbjct: 286 GK 287
Score = 103 bits (258), Expect = 7e-20
Identities = 54/94 (57%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Frame = +1
Query: 46 SLSGAQFVARPNNDLTRRVGSSTARFTMRRTVKTAPQ----SIWYGPERPKWLGPFSEQT 213
+LS + F + DL AR TMR+T A S WYG +R +LGP S
Sbjct: 28 ALSPSSFAGKAVKDLPSSALFGEARVTMRKTAAKAKPVSSGSPWYGSDRVLYLGPLSGDP 87
Query: 214 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEV 315
PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Sbjct: 88 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 121
>gb|EMS51039.1| Chlorophyll a-b binding protein 3C, chloroplastic [Triticum urartu]
Length = 265
Score = 167 bits (424), Expect = 4e-39
Identities = 86/122 (70%), Positives = 90/122 (73%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDP 556
DYLGNP+LVHAQSILAIWACQVVLMGAVE SFDPLGLADDP
Sbjct: 144 DYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDP 203
Query: 557 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVP 736
+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLSDP VP
Sbjct: 204 EAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVP 263
Query: 737 GK 742
GK
Sbjct: 264 GK 265
Score = 100 bits (248), Expect = 1e-18
Identities = 49/71 (69%), Positives = 54/71 (76%), Gaps = 4/71 (5%)
Frame = +1
Query: 115 ARFTMRRTVKTAPQ----SIWYGPERPKWLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 282
AR TMR+T A S WYG +R +LGP S + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 29 ARVTMRKTAAKAKPVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 88
Query: 283 ETFARNRELEV 315
ETFA+NRELEV
Sbjct: 89 ETFAKNRELEV 99
>gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein of photosystem II
[Ginkgo biloba]
Length = 270
Score = 167 bits (424), Expect = 4e-39
Identities = 85/122 (69%), Positives = 90/122 (73%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDP 556
DYLGNP+L+HAQSILAIWACQV+LMGAVE SFDPLGLADDP
Sbjct: 149 DYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP 208
Query: 557 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVP 736
DAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENLADHL+DP VP
Sbjct: 209 DAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVP 268
Query: 737 GK 742
GK
Sbjct: 269 GK 270
Score = 114 bits (284), Expect = 7e-23
Identities = 57/94 (60%), Positives = 65/94 (69%), Gaps = 3/94 (3%)
Frame = +1
Query: 43 SSLSGAQFVARPNNDLTRRV---GSSTARFTMRRTVKTAPQSIWYGPERPKWLGPFSEQT 213
SS Q V +P N+ V G T R T + V + S WYGP+R K+LGPFS +
Sbjct: 11 SSAFAGQIVLKPQNEFVGGVHGEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEA 70
Query: 214 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEV 315
PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEV
Sbjct: 71 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 104
>emb|CAA57409.1| light harvesting chlorophyll a /b-binding protein Lhcb1*2-2 [Picea
abies]
Length = 275
Score = 167 bits (424), Expect = 4e-39
Identities = 85/122 (69%), Positives = 90/122 (73%)
Frame = +2
Query: 377 DYLGNPNLVHAQSILAIWACQVVLMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDP 556
DYLGNP+L+HAQSILAIWACQV+LMGAVE SFDPLGLADDP
Sbjct: 154 DYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP 213
Query: 557 DAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVP 736
DAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENLADHL+DP VP
Sbjct: 214 DAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNNAWAYATNFVP 273
Query: 737 GK 742
GK
Sbjct: 274 GK 275
Score = 107 bits (267), Expect = 7e-21
Identities = 55/90 (61%), Positives = 65/90 (72%), Gaps = 9/90 (10%)
Frame = +1
Query: 73 RPNNDLTRRVGSST---ARFTMRRTVKT------APQSIWYGPERPKWLGPFSEQTPSYL 225
+P+N+ VG+ AR TMR++ T A S WYGP+R +LGPFS + PSYL
Sbjct: 20 KPHNNQLLGVGAGVHGEARVTMRKSSTTKKVSASASPSPWYGPDRVLYLGPFSGEPPSYL 79
Query: 226 TGEFPGDYGWDTAGLSADPETFARNRELEV 315
TGEFPGDYGWDTAGLSADPETFA+NRELEV
Sbjct: 80 TGEFPGDYGWDTAGLSADPETFAKNRELEV 109