BLASTX nr result
ID: Ephedra26_contig00000044
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00000044
(709 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16805.1| unknown [Picea sitchensis] 93 1e-16
ref|NP_001233834.1| chloroplast-specific ribosomal protein [Sola... 92 2e-16
ref|XP_006347313.1| PREDICTED: ribosome-binding factor PSRP1, ch... 91 5e-16
gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum] 91 5e-16
gb|EOY23705.1| Plastid-specific 30S ribosomal protein 1 [Theobro... 90 6e-16
gb|EMT25487.1| 30S ribosomal protein 1, chloroplastic [Aegilops ... 89 1e-15
dbj|BAJ98981.1| predicted protein [Hordeum vulgare subsp. vulgare] 89 1e-15
ref|XP_003559644.1| PREDICTED: 30S ribosomal protein 1, chloropl... 87 7e-15
ref|XP_001775453.1| predicted protein [Physcomitrella patens] gi... 86 9e-15
ref|XP_004502759.1| PREDICTED: ribosome-binding factor PSRP1, ch... 86 2e-14
ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloropl... 85 2e-14
ref|XP_001758609.1| predicted protein [Physcomitrella patens] gi... 85 2e-14
emb|CBI23087.3| unnamed protein product [Vitis vinifera] 85 2e-14
ref|XP_006493202.1| PREDICTED: ribosome-binding factor PSRP1, ch... 85 3e-14
ref|XP_006441240.1| hypothetical protein CICLE_v10021260mg [Citr... 85 3e-14
ref|XP_004980981.1| PREDICTED: ribosome-binding factor PSRP1, ch... 85 3e-14
gb|EMJ19977.1| hypothetical protein PRUPE_ppa009612mg [Prunus pe... 85 3e-14
ref|XP_002317839.1| 30S ribosomal family protein [Populus tricho... 84 3e-14
gb|ESW08430.1| hypothetical protein PHAVU_009G045100g [Phaseolus... 84 4e-14
gb|AGV54273.1| 30S ribosomal protein [Phaseolus vulgaris] 84 4e-14
>gb|ABR16805.1| unknown [Picea sitchensis]
Length = 321
Score = 92.8 bits (229), Expect = 1e-16
Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 8/102 (7%)
Frame = +3
Query: 84 VKRQPKL-----TAVLDDSPLMSDEEDDIEDVNA---DNMYNDGTKVVKEKEFDMLPIST 239
+++QPKL T V+D E DD+ DV + + + +VV+ K F+M P+S
Sbjct: 197 MRKQPKLGELLSTVVMDVKETRDKELDDLADVEEMRYEKIDDLSDEVVRTKYFEMPPMSP 256
Query: 240 TEAAEHLVNLGHDFYVFRNLENGEVNVMYKRKRGGYGLIAPK 365
EA E L+N+ HDFY FRN+E+GEVNV+YKRK GGYGLI PK
Sbjct: 257 EEALEQLMNVDHDFYAFRNMESGEVNVLYKRKHGGYGLIVPK 298
>ref|NP_001233834.1| chloroplast-specific ribosomal protein [Solanum lycopersicum]
gi|51457950|gb|AAU03364.1| chloroplast-specific
ribosomal protein [Solanum lycopersicum]
Length = 311
Score = 91.7 bits (226), Expect = 2e-16
Identities = 46/93 (49%), Positives = 62/93 (66%)
Frame = +3
Query: 90 RQPKLTAVLDDSPLMSDEEDDIEDVNADNMYNDGTKVVKEKEFDMLPISTTEAAEHLVNL 269
R P+ V +D +S EE+ +ED +D T+VV++K FDM P+S EA E L N+
Sbjct: 201 RDPEALLVQEDLETLSQEEE-VEDDKSDGFV---TEVVRKKSFDMPPLSVNEAIEQLENV 256
Query: 270 GHDFYVFRNLENGEVNVMYKRKRGGYGLIAPKK 368
HDFY FRN E GE+N++Y+RK GGYGLI PK+
Sbjct: 257 DHDFYGFRNEETGEINIVYRRKEGGYGLIIPKE 289
>ref|XP_006347313.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Solanum
tuberosum]
Length = 312
Score = 90.5 bits (223), Expect = 5e-16
Identities = 44/93 (47%), Positives = 61/93 (65%)
Frame = +3
Query: 90 RQPKLTAVLDDSPLMSDEEDDIEDVNADNMYNDGTKVVKEKEFDMLPISTTEAAEHLVNL 269
R P++ V +D + EE+ +D +D T+VV++K FDM P+S EA E L N+
Sbjct: 201 RDPEVLLVQEDLETLPQEEEVEDDDKSDGFV---TEVVRKKSFDMPPLSVNEAIEQLENV 257
Query: 270 GHDFYVFRNLENGEVNVMYKRKRGGYGLIAPKK 368
HDFY FRN E GE+N++Y+RK GGYGLI PK+
Sbjct: 258 DHDFYGFRNEETGEINIVYRRKEGGYGLIIPKE 290
>gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum]
Length = 280
Score = 90.5 bits (223), Expect = 5e-16
Identities = 44/93 (47%), Positives = 61/93 (65%)
Frame = +3
Query: 90 RQPKLTAVLDDSPLMSDEEDDIEDVNADNMYNDGTKVVKEKEFDMLPISTTEAAEHLVNL 269
R P++ V +D + EE+ +D +D T+VV++K FDM P+S EA E L N+
Sbjct: 173 RDPEVLLVQEDLETLPQEEEVEDDDKSDGFV---TEVVRKKSFDMPPLSVNEAIEQLENV 229
Query: 270 GHDFYVFRNLENGEVNVMYKRKRGGYGLIAPKK 368
HDFY FRN E GE+N++Y+RK GGYGLI PK+
Sbjct: 230 DHDFYGFRNEETGEINIVYRRKEGGYGLIIPKE 262
>gb|EOY23705.1| Plastid-specific 30S ribosomal protein 1 [Theobroma cacao]
Length = 320
Score = 90.1 bits (222), Expect = 6e-16
Identities = 53/133 (39%), Positives = 72/133 (54%), Gaps = 12/133 (9%)
Frame = +3
Query: 3 TTYGSIDAVSXXXXXXXXXXXXXXX----------QMVKRQPKLTAVLDDSPLMSDEEDD 152
T YGSID VS ++ R+P V D+ + ++EDD
Sbjct: 167 TVYGSIDLVSSILQRKLRKIKEKESDHGRHMKGFNRLKVREPVAVLVEDEVEAVPEQEDD 226
Query: 153 IEDVNADNMYNDGT--KVVKEKEFDMLPISTTEAAEHLVNLGHDFYVFRNLENGEVNVMY 326
+E V +DG ++V+ K FDM P++ +EA E L N+ HDFY FRN E GE+N++Y
Sbjct: 227 VEAVPEQE--DDGLIDEIVRTKYFDMPPLTVSEAIEQLENVDHDFYGFRNEETGEINILY 284
Query: 327 KRKRGGYGLIAPK 365
KRK GGYGLI PK
Sbjct: 285 KRKAGGYGLIIPK 297
>gb|EMT25487.1| 30S ribosomal protein 1, chloroplastic [Aegilops tauschii]
Length = 229
Score = 89.0 bits (219), Expect = 1e-15
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
Frame = +3
Query: 102 LTAVLDDSPLMSDEEDD--IEDVNADNMYNDGTKVVKEKEFDMLPISTTEAAEHLVNLGH 275
L+ V D+S +EE+D +E + A++ TKVV+ K F+M P++ EA E L N+ H
Sbjct: 121 LSDVEDESEAEEEEEEDELVEVIGAEDEETVLTKVVRTKVFEMAPLTVDEALEQLENVDH 180
Query: 276 DFYVFRNLENGEVNVMYKRKRGGYGLIAPKK 368
DFY FRN + GEVN++YKRK GG+GLI PK+
Sbjct: 181 DFYAFRNEQTGEVNILYKRKEGGFGLIIPKQ 211
>dbj|BAJ98981.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 301
Score = 89.0 bits (219), Expect = 1e-15
Identities = 42/86 (48%), Positives = 60/86 (69%)
Frame = +3
Query: 111 VLDDSPLMSDEEDDIEDVNADNMYNDGTKVVKEKEFDMLPISTTEAAEHLVNLGHDFYVF 290
V ++S L +E+D +E + A++ TKVV+ K F+M P++ EA E L N+ HDFY F
Sbjct: 198 VEEESELELEEDDLVEVIGAEDEETVLTKVVRTKVFEMAPLTVDEALEQLENVDHDFYAF 257
Query: 291 RNLENGEVNVMYKRKRGGYGLIAPKK 368
RN + GEVN++YKRK GG+GLI PK+
Sbjct: 258 RNEQTGEVNILYKRKEGGFGLIIPKQ 283
>ref|XP_003559644.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like
[Brachypodium distachyon]
Length = 290
Score = 86.7 bits (213), Expect = 7e-15
Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = +3
Query: 93 QPKLTAVLDDSPLMSDEEDD--IEDVNADNMYNDGTKVVKEKEFDMLPISTTEAAEHLVN 266
Q A +S + +E++D +E + A++ TKVV+ K F+M P++ EA E L N
Sbjct: 179 QTAAAAAFSESDVDEEEDEDELVEVIGAEDEETVLTKVVRTKVFEMAPLTVDEALEQLEN 238
Query: 267 LGHDFYVFRNLENGEVNVMYKRKRGGYGLIAPKK 368
+ HDFY FRN + GEVN++YKRK GG+GLI PK+
Sbjct: 239 VDHDFYAFRNEQTGEVNILYKRKEGGFGLIIPKQ 272
>ref|XP_001775453.1| predicted protein [Physcomitrella patens]
gi|162673256|gb|EDQ59782.1| predicted protein
[Physcomitrella patens]
Length = 297
Score = 86.3 bits (212), Expect = 9e-15
Identities = 40/89 (44%), Positives = 57/89 (64%)
Frame = +3
Query: 111 VLDDSPLMSDEEDDIEDVNADNMYNDGTKVVKEKEFDMLPISTTEAAEHLVNLGHDFYVF 290
V+D P++ + DD+ D +VV+ K F+M P+ EA E LVN+GHDFY F
Sbjct: 209 VVDLDPILERKPDDLPD-----------EVVRTKYFEMRPMKPLEALEQLVNVGHDFYAF 257
Query: 291 RNLENGEVNVMYKRKRGGYGLIAPKKPNS 377
RN+E+GE+N++YKR GGYG+I P+ S
Sbjct: 258 RNVESGEINILYKRTHGGYGIIVPRNDES 286
>ref|XP_004502759.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like [Cicer
arietinum]
Length = 302
Score = 85.5 bits (210), Expect = 2e-14
Identities = 52/126 (41%), Positives = 69/126 (54%), Gaps = 5/126 (3%)
Frame = +3
Query: 3 TTYGSIDAVSXXXXXXXXXXXXXXX---QMVKRQPKLTAVLDDSPLMSDEEDDIE--DVN 167
TTYGSID VS + +K +L PL ++EED+IE
Sbjct: 154 TTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGSNRLKFREAVLPLPTEEEDEIEMSPQK 213
Query: 168 ADNMYNDGTKVVKEKEFDMLPISTTEAAEHLVNLGHDFYVFRNLENGEVNVMYKRKRGGY 347
+ +VV+ K FDM P++ +EA + L N+ HDFY FRN E GE+N++YKRK GGY
Sbjct: 214 KEEEQEFIEEVVRTKYFDMPPLTVSEAIDQLENVHHDFYAFRNEETGEINIVYKRKEGGY 273
Query: 348 GLIAPK 365
GLI PK
Sbjct: 274 GLIIPK 279
>ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like [Vitis
vinifera]
Length = 298
Score = 85.1 bits (209), Expect = 2e-14
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
Frame = +3
Query: 3 TTYGSIDAVSXXXXXXXXXXXXXXX---QMVKRQPKLTAVLDDSPLMSDEEDDIEDVNAD 173
T YGSID VS + +K +L ++PL+ +E D +
Sbjct: 155 TLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPLVEEEADVVPQKEDG 214
Query: 174 NMYNDGTKVVKEKEFDMLPISTTEAAEHLVNLGHDFYVFRNLENGEVNVMYKRKRGGYGL 353
++ N+ +V+ K FDM P++ EA E L N+ HDF+ FRN E GE+N++YKRK GGYGL
Sbjct: 215 DLINE---IVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINILYKRKAGGYGL 271
Query: 354 IAPKKPNSGKE 386
I PK+ +E
Sbjct: 272 IIPKENGKTEE 282
>ref|XP_001758609.1| predicted protein [Physcomitrella patens]
gi|162690219|gb|EDQ76587.1| predicted protein
[Physcomitrella patens]
Length = 221
Score = 85.1 bits (209), Expect = 2e-14
Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Frame = +3
Query: 87 KRQPKLTAVLDDS-----PLMSDEEDDIEDVNADNMYNDGTKVVKEKEFDMLPISTTEAA 251
+ P++ VL D P++ + DD+ D ++V+ K F+M P+ EA
Sbjct: 120 RHSPRIGEVLSDEVVDLDPILGRKPDDLPD-----------EIVRTKYFEMRPMKPLEAL 168
Query: 252 EHLVNLGHDFYVFRNLENGEVNVMYKRKRGGYGLIAPK 365
E LVN+GHDFY FRN+E+GE+N++YKR GGYG+I P+
Sbjct: 169 EQLVNVGHDFYAFRNVESGEINILYKRTHGGYGIIVPR 206
>emb|CBI23087.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 85.1 bits (209), Expect = 2e-14
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
Frame = +3
Query: 3 TTYGSIDAVSXXXXXXXXXXXXXXX---QMVKRQPKLTAVLDDSPLMSDEEDDIEDVNAD 173
T YGSID VS + +K +L ++PL+ +E D +
Sbjct: 87 TLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPLVEEEADVVPQKEDG 146
Query: 174 NMYNDGTKVVKEKEFDMLPISTTEAAEHLVNLGHDFYVFRNLENGEVNVMYKRKRGGYGL 353
++ N+ +V+ K FDM P++ EA E L N+ HDF+ FRN E GE+N++YKRK GGYGL
Sbjct: 147 DLINE---IVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINILYKRKAGGYGL 203
Query: 354 IAPKKPNSGKE 386
I PK+ +E
Sbjct: 204 IIPKENGKTEE 214
>ref|XP_006493202.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like
[Citrus sinensis]
Length = 319
Score = 84.7 bits (208), Expect = 3e-14
Identities = 43/99 (43%), Positives = 61/99 (61%)
Frame = +3
Query: 90 RQPKLTAVLDDSPLMSDEEDDIEDVNADNMYNDGTKVVKEKEFDMLPISTTEAAEHLVNL 269
R+P V +D+ + S+EEDD N ++V+ K F+M P++ +EA E L N+
Sbjct: 215 REPVTQVVENDADVQSEEEDD----------NFVDEIVRMKFFEMPPLTVSEAIEQLENV 264
Query: 270 GHDFYVFRNLENGEVNVMYKRKRGGYGLIAPKKPNSGKE 386
HDFY FRN E GE+N++YKRK GGYG+I PK K+
Sbjct: 265 DHDFYGFRNEETGEINIVYKRKAGGYGVIIPKGNGKAKK 303
>ref|XP_006441240.1| hypothetical protein CICLE_v10021260mg [Citrus clementina]
gi|557543502|gb|ESR54480.1| hypothetical protein
CICLE_v10021260mg [Citrus clementina]
Length = 313
Score = 84.7 bits (208), Expect = 3e-14
Identities = 43/99 (43%), Positives = 61/99 (61%)
Frame = +3
Query: 90 RQPKLTAVLDDSPLMSDEEDDIEDVNADNMYNDGTKVVKEKEFDMLPISTTEAAEHLVNL 269
R+P V +D+ + S+EEDD N ++V+ K F+M P++ +EA E L N+
Sbjct: 209 REPVTQVVENDADVQSEEEDD----------NFVDEIVRMKFFEMPPLTVSEAIEQLENV 258
Query: 270 GHDFYVFRNLENGEVNVMYKRKRGGYGLIAPKKPNSGKE 386
HDFY FRN E GE+N++YKRK GGYG+I PK K+
Sbjct: 259 DHDFYGFRNEETGEINIVYKRKAGGYGVIIPKGNGKAKK 297
>ref|XP_004980981.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like
[Setaria italica]
Length = 300
Score = 84.7 bits (208), Expect = 3e-14
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +3
Query: 117 DDSPLMSDEEDDIEDVNADNMYNDGTKVVKEKEFDMLPISTTEAAEHLVNLGHDFYVFRN 296
DD + E+D V A++ TKVV+ K F+M P+ EA E L N+ HDFY FRN
Sbjct: 192 DDQEQAAAEQDLTAAVGAEDEDTVLTKVVRTKVFEMPPLGVDEALEQLQNVDHDFYAFRN 251
Query: 297 LENGEVNVMYKRKRGGYGLIAPKK 368
+ GEVN++YKRK GGYGLI PK+
Sbjct: 252 EDTGEVNILYKRKEGGYGLIIPKE 275
>gb|EMJ19977.1| hypothetical protein PRUPE_ppa009612mg [Prunus persica]
Length = 285
Score = 84.7 bits (208), Expect = 3e-14
Identities = 44/104 (42%), Positives = 63/104 (60%)
Frame = +3
Query: 90 RQPKLTAVLDDSPLMSDEEDDIEDVNADNMYNDGTKVVKEKEFDMLPISTTEAAEHLVNL 269
R+P V+++ +EE+ + + ND ++V+ K FDM P++ EA + L N+
Sbjct: 178 REPATQIVVEE-----EEEETVPQEEEGDFIND--EIVRMKYFDMPPLTVAEAVDQLENV 230
Query: 270 GHDFYVFRNLENGEVNVMYKRKRGGYGLIAPKKPNSGKE*KGRH 401
HDFY FRN E GE+N++YKRK GGYGLI PK +GK K H
Sbjct: 231 DHDFYAFRNEETGEINIIYKRKEGGYGLIIPK--GNGKAEKSGH 272
>ref|XP_002317839.1| 30S ribosomal family protein [Populus trichocarpa]
gi|222858512|gb|EEE96059.1| 30S ribosomal family protein
[Populus trichocarpa]
Length = 306
Score = 84.3 bits (207), Expect = 3e-14
Identities = 46/121 (38%), Positives = 63/121 (52%)
Frame = +3
Query: 3 TTYGSIDAVSXXXXXXXXXXXXXXXQMVKRQPKLTAVLDDSPLMSDEEDDIEDVNADNMY 182
T Y SID VS + + P+ E D ++V+ +
Sbjct: 163 TIYASIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREPVPQVVEGDADEVSQQEVE 222
Query: 183 NDGTKVVKEKEFDMLPISTTEAAEHLVNLGHDFYVFRNLENGEVNVMYKRKRGGYGLIAP 362
+ +VV+ K FDM P++ +EA E L N+ HDFY FRN E GE+N++YKRK GGYGLI P
Sbjct: 223 DSIEEVVRTKFFDMPPLTVSEAIEQLENVDHDFYGFRNEETGEINIVYKRKAGGYGLIIP 282
Query: 363 K 365
K
Sbjct: 283 K 283
>gb|ESW08430.1| hypothetical protein PHAVU_009G045100g [Phaseolus vulgaris]
Length = 330
Score = 84.0 bits (206), Expect = 4e-14
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Frame = +3
Query: 3 TTYGSIDAVSXXXXXXXXXXXXXXX----------QMVKRQPKLTAVLDDSPLMSDEEDD 152
+TYGSID VS ++ R+P + + ++S EE++
Sbjct: 187 STYGSIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREPVEQLPVQEDEILSPEEEE 246
Query: 153 IEDVNADNMYNDGTKVVKEKEFDMLPISTTEAAEHLVNLGHDFYVFRNLENGEVNVMYKR 332
E + +VV+ K FDM P++ +EA E LVN+ HDFY FRN E GEVN++YKR
Sbjct: 247 -ESIE---------EVVRTKYFDMPPLTVSEAIEQLVNVDHDFYGFRNEETGEVNIVYKR 296
Query: 333 KRGGYGLIAPK 365
K GGYGLI PK
Sbjct: 297 KEGGYGLIIPK 307
>gb|AGV54273.1| 30S ribosomal protein [Phaseolus vulgaris]
Length = 292
Score = 84.0 bits (206), Expect = 4e-14
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Frame = +3
Query: 3 TTYGSIDAVSXXXXXXXXXXXXXXX----------QMVKRQPKLTAVLDDSPLMSDEEDD 152
+TYGSID VS ++ R+P + + ++S EE++
Sbjct: 149 STYGSIDLVSSIIQRKLRKIKEKESDHGRHMKGFNKLKVREPVEQLPVQEDEILSPEEEE 208
Query: 153 IEDVNADNMYNDGTKVVKEKEFDMLPISTTEAAEHLVNLGHDFYVFRNLENGEVNVMYKR 332
E + +VV+ K FDM P++ +EA E LVN+ HDFY FRN E GEVN++YKR
Sbjct: 209 -ESIE---------EVVRTKYFDMPPLTVSEAIEQLVNVDHDFYGFRNEETGEVNIVYKR 258
Query: 333 KRGGYGLIAPK 365
K GGYGLI PK
Sbjct: 259 KEGGYGLIIPK 269