BLASTX nr result
ID: Ephedra26_contig00000016
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00000016
(979 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK21876.1| unknown [Picea sitchensis] gi|116782420|gb|ABK224... 204 3e-50
gb|ABK22359.1| unknown [Picea sitchensis] 204 3e-50
gb|ABK21852.1| unknown [Picea sitchensis] 204 3e-50
gb|ACN40169.1| unknown [Picea sitchensis] 203 7e-50
gb|ABK21447.1| unknown [Picea sitchensis] gi|116780594|gb|ABK217... 203 9e-50
gb|ABK21690.1| unknown [Picea sitchensis] 203 9e-50
gb|ABK21259.1| unknown [Picea sitchensis] gi|116779401|gb|ABK212... 203 9e-50
gb|ABK21347.1| unknown [Picea sitchensis] gi|116780861|gb|ABK218... 203 9e-50
gb|ACN40281.1| unknown [Picea sitchensis] 202 2e-49
gb|ABK26083.1| unknown [Picea sitchensis] 202 2e-49
gb|ACN40080.1| unknown [Picea sitchensis] 202 2e-49
gb|ACN39774.1| unknown [Picea sitchensis] 199 1e-48
gb|EMT25898.1| Ribulose bisphosphate carboxylase small chain PWS... 196 9e-48
sp|P10053.1|RBS_PINTH RecName: Full=Ribulose bisphosphate carbox... 195 2e-47
ref|XP_006405770.1| hypothetical protein EUTSA_v10027955mg [Eutr... 194 4e-47
emb|CAA30290.1| rubisco ssu precursor [Brassica napus] 194 4e-47
ref|XP_002868776.1| ribulose bisphosphate carboxylase [Arabidops... 194 4e-47
ref|XP_002868775.1| ribulose bisphosphate carboxylase small chai... 194 4e-47
gb|AAF07942.1|AF192773_1 ribulose-1,5-bisphosphate carboxylase s... 194 6e-47
gb|AAC67588.1| ribulose-1,5-bisphosphate carboxylase small subun... 194 6e-47
>gb|ABK21876.1| unknown [Picea sitchensis] gi|116782420|gb|ABK22499.1| unknown
[Picea sitchensis] gi|116784603|gb|ABK23405.1| unknown
[Picea sitchensis] gi|116793621|gb|ABK26814.1| unknown
[Picea sitchensis] gi|116793637|gb|ABK26822.1| unknown
[Picea sitchensis] gi|116794195|gb|ABK27041.1| unknown
[Picea sitchensis] gi|148907673|gb|ABR16965.1| unknown
[Picea sitchensis] gi|224285721|gb|ACN40576.1| unknown
[Picea sitchensis]
Length = 193
Score = 204 bits (520), Expect = 3e-50
Identities = 101/182 (55%), Positives = 119/182 (65%), Gaps = 22/182 (12%)
Frame = +3
Query: 249 AMGMSAVVAPAKTS----------------------LMRPLELSKAPSSVAKGIKKSAST 362
A M+AV AP KTS +++S A + + +
Sbjct: 9 AAAMAAVAAPPKTSNGNGSSNGNVVSAFTGLKSTAQFPSSMKISNAGAEWERKTTSNGGR 68
Query: 363 TKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISRKYGAT 542
+ M VWP + KFETLSYLP LTQEQL KE++YLLRNKWVPCLEFDE+G I RKYG+T
Sbjct: 69 VRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDEDGIIKRKYGST 128
Query: 543 PGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVH 722
PGYYDGRYW MWKLPMFGC +++ VL E+ E K YPKAF+R IGFDN RQVQCISFIVH
Sbjct: 129 PGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVH 188
Query: 723 KP 728
KP
Sbjct: 189 KP 190
>gb|ABK22359.1| unknown [Picea sitchensis]
Length = 193
Score = 204 bits (520), Expect = 3e-50
Identities = 101/182 (55%), Positives = 119/182 (65%), Gaps = 22/182 (12%)
Frame = +3
Query: 249 AMGMSAVVAPAKTS----------------------LMRPLELSKAPSSVAKGIKKSAST 362
A M+AV AP KTS +++S A + + +
Sbjct: 9 AAAMAAVAAPPKTSNGSGSSNGNVVSAFTGLKSTAQFPSSMKISNAGAEWERKTTSNGGR 68
Query: 363 TKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISRKYGAT 542
+ M VWP + KFETLSYLP LTQEQL KE++YLLRNKWVPCLEFDE+G I RKYG+T
Sbjct: 69 VRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDEDGIIKRKYGST 128
Query: 543 PGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVH 722
PGYYDGRYW MWKLPMFGC +++ VL E+ E K YPKAF+R IGFDN RQVQCISFIVH
Sbjct: 129 PGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVH 188
Query: 723 KP 728
KP
Sbjct: 189 KP 190
>gb|ABK21852.1| unknown [Picea sitchensis]
Length = 193
Score = 204 bits (520), Expect = 3e-50
Identities = 101/182 (55%), Positives = 119/182 (65%), Gaps = 22/182 (12%)
Frame = +3
Query: 249 AMGMSAVVAPAKTS----------------------LMRPLELSKAPSSVAKGIKKSAST 362
A M+AV AP KTS +++S A + + +
Sbjct: 9 AAAMAAVAAPPKTSNGNGSSNGNVVAAFTGLKSTAQFPSSMKISNAGAEWERKTTSNGGR 68
Query: 363 TKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISRKYGAT 542
+ M VWP + KFETLSYLP LTQEQL KE++YLLRNKWVPCLEFDE+G I RKYG+T
Sbjct: 69 VRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDEDGIIKRKYGST 128
Query: 543 PGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVH 722
PGYYDGRYW MWKLPMFGC +++ VL E+ E K YPKAF+R IGFDN RQVQCISFIVH
Sbjct: 129 PGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVH 188
Query: 723 KP 728
KP
Sbjct: 189 KP 190
>gb|ACN40169.1| unknown [Picea sitchensis]
Length = 194
Score = 203 bits (517), Expect = 7e-50
Identities = 103/183 (56%), Positives = 118/183 (64%), Gaps = 23/183 (12%)
Frame = +3
Query: 249 AMGMSAVVAPAKTSLMRPLELSKAPSSVAKGIKKSAS----------------------- 359
A M+AV AP KTS S S G+K +A
Sbjct: 9 AAAMAAVAAPLKTSNGNGSSSSDNVVSAFTGLKSTAQFPSSMKTNNAGAEWERKTTSNGG 68
Query: 360 TTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISRKYGA 539
+ M VWP + KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I RKYG+
Sbjct: 69 RVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKRKYGS 128
Query: 540 TPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIV 719
TPGYYDGRYW MWKLPMFGC +++ VL E+ E K YPKAF+R IGFDN RQVQCISFIV
Sbjct: 129 TPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIV 188
Query: 720 HKP 728
HKP
Sbjct: 189 HKP 191
>gb|ABK21447.1| unknown [Picea sitchensis] gi|116780594|gb|ABK21733.1| unknown
[Picea sitchensis] gi|116782047|gb|ABK22347.1| unknown
[Picea sitchensis] gi|116783228|gb|ABK22845.1| unknown
[Picea sitchensis] gi|116785645|gb|ABK23805.1| unknown
[Picea sitchensis] gi|116785985|gb|ABK23931.1| unknown
[Picea sitchensis] gi|116786044|gb|ABK23949.1| unknown
[Picea sitchensis] gi|116790039|gb|ABK25479.1| unknown
[Picea sitchensis] gi|116793644|gb|ABK26825.1| unknown
[Picea sitchensis] gi|224284814|gb|ACN40137.1| unknown
[Picea sitchensis] gi|224285468|gb|ACN40456.1| unknown
[Picea sitchensis] gi|224285619|gb|ACN40528.1| unknown
[Picea sitchensis] gi|224285683|gb|ACN40557.1| unknown
[Picea sitchensis]
Length = 194
Score = 203 bits (516), Expect = 9e-50
Identities = 103/183 (56%), Positives = 118/183 (64%), Gaps = 23/183 (12%)
Frame = +3
Query: 249 AMGMSAVVAPAKTSLMRPLELSKAPSSVAKGIKKSAS----------------------- 359
A M+AV AP KTS S S G+K +A
Sbjct: 9 AAAMAAVAAPLKTSNGNGSSSSGNVVSAFTGLKSTAQFPSSMKTNNAGAEWEQKTTSNGG 68
Query: 360 TTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISRKYGA 539
+ M VWP + KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I RKYG+
Sbjct: 69 RVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKRKYGS 128
Query: 540 TPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIV 719
TPGYYDGRYW MWKLPMFGC +++ VL E+ E K YPKAF+R IGFDN RQVQCISFIV
Sbjct: 129 TPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIV 188
Query: 720 HKP 728
HKP
Sbjct: 189 HKP 191
>gb|ABK21690.1| unknown [Picea sitchensis]
Length = 194
Score = 203 bits (516), Expect = 9e-50
Identities = 103/183 (56%), Positives = 118/183 (64%), Gaps = 23/183 (12%)
Frame = +3
Query: 249 AMGMSAVVAPAKTSLMRPLELSKAPSSVAKGIKKSAS----------------------- 359
A M+AV AP KTS S S G+K +A
Sbjct: 9 AAAMAAVAAPLKTSNGNGSSSSGNVVSAFTGLKSTAQFPSSMKTNNAGAELEQKTTSNGG 68
Query: 360 TTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISRKYGA 539
+ M VWP + KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I RKYG+
Sbjct: 69 RVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKRKYGS 128
Query: 540 TPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIV 719
TPGYYDGRYW MWKLPMFGC +++ VL E+ E K YPKAF+R IGFDN RQVQCISFIV
Sbjct: 129 TPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIV 188
Query: 720 HKP 728
HKP
Sbjct: 189 HKP 191
>gb|ABK21259.1| unknown [Picea sitchensis] gi|116779401|gb|ABK21267.1| unknown
[Picea sitchensis] gi|116779440|gb|ABK21283.1| unknown
[Picea sitchensis] gi|116781990|gb|ABK22328.1| unknown
[Picea sitchensis] gi|116782020|gb|ABK22337.1| unknown
[Picea sitchensis] gi|116782035|gb|ABK22342.1| unknown
[Picea sitchensis] gi|116784457|gb|ABK23349.1| unknown
[Picea sitchensis] gi|116785630|gb|ABK23799.1| unknown
[Picea sitchensis] gi|116786299|gb|ABK24056.1| unknown
[Picea sitchensis] gi|116791702|gb|ABK26077.1| unknown
[Picea sitchensis] gi|116792861|gb|ABK26530.1| unknown
[Picea sitchensis] gi|148905732|gb|ABR16030.1| unknown
[Picea sitchensis] gi|224284032|gb|ACN39754.1| unknown
[Picea sitchensis] gi|224284134|gb|ACN39804.1| unknown
[Picea sitchensis] gi|224284171|gb|ACN39822.1| unknown
[Picea sitchensis] gi|224284301|gb|ACN39886.1| unknown
[Picea sitchensis] gi|224284342|gb|ACN39906.1| unknown
[Picea sitchensis] gi|224284389|gb|ACN39929.1| unknown
[Picea sitchensis] gi|224284796|gb|ACN40128.1| unknown
[Picea sitchensis] gi|224284941|gb|ACN40200.1| unknown
[Picea sitchensis] gi|224284998|gb|ACN40228.1| unknown
[Picea sitchensis] gi|224285010|gb|ACN40234.1| unknown
[Picea sitchensis] gi|224285109|gb|ACN40282.1| unknown
[Picea sitchensis] gi|224285123|gb|ACN40289.1| unknown
[Picea sitchensis] gi|224285656|gb|ACN40544.1| unknown
[Picea sitchensis] gi|224285893|gb|ACN40660.1| unknown
[Picea sitchensis]
Length = 194
Score = 203 bits (516), Expect = 9e-50
Identities = 103/183 (56%), Positives = 118/183 (64%), Gaps = 23/183 (12%)
Frame = +3
Query: 249 AMGMSAVVAPAKTSLMRPLELSKAPSSVAKGIKKSAS----------------------- 359
A M+AV AP KTS S S G+K +A
Sbjct: 9 AAAMAAVAAPLKTSNGNGSSSSGNVVSAFTGLKSTAQFPSSMKTNNAGAEWERKTTSNGG 68
Query: 360 TTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISRKYGA 539
+ M VWP + KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I RKYG+
Sbjct: 69 RVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKRKYGS 128
Query: 540 TPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIV 719
TPGYYDGRYW MWKLPMFGC +++ VL E+ E K YPKAF+R IGFDN RQVQCISFIV
Sbjct: 129 TPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIV 188
Query: 720 HKP 728
HKP
Sbjct: 189 HKP 191
>gb|ABK21347.1| unknown [Picea sitchensis] gi|116780861|gb|ABK21851.1| unknown
[Picea sitchensis] gi|148905962|gb|ABR16142.1| unknown
[Picea sitchensis] gi|224284092|gb|ACN39783.1| unknown
[Picea sitchensis] gi|224284864|gb|ACN40162.1| unknown
[Picea sitchensis] gi|224285028|gb|ACN40243.1| unknown
[Picea sitchensis]
Length = 195
Score = 203 bits (516), Expect = 9e-50
Identities = 92/142 (64%), Positives = 109/142 (76%)
Frame = +3
Query: 303 LELSKAPSSVAKGIKKSASTTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNK 482
+++S A + + + + M VWP + KFETLSYLP LTQEQL KE++YLLRNK
Sbjct: 51 MKISNAGAEWERKTTSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNK 110
Query: 483 WVPCLEFDEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAF 662
WVPCLEFDE+G I RKYG+TPGYYDGRYW MWKLPMFGC +++ VL E+ E K YPKAF
Sbjct: 111 WVPCLEFDEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAF 170
Query: 663 VRCIGFDNNRQVQCISFIVHKP 728
+R IGFDN RQVQCISFIVHKP
Sbjct: 171 IRVIGFDNVRQVQCISFIVHKP 192
>gb|ACN40281.1| unknown [Picea sitchensis]
Length = 194
Score = 202 bits (514), Expect = 2e-49
Identities = 103/183 (56%), Positives = 118/183 (64%), Gaps = 23/183 (12%)
Frame = +3
Query: 249 AMGMSAVVAPAKTSLMRPLELSKAPSSVAKGIKKSAS----------------------- 359
A M+AV AP KTS S S G+K +A
Sbjct: 9 AAAMAAVAAPLKTSNGNGSSSSGNVVSAFTGLKSTAQFPSSMKTNNAGAEWERKTTSNGG 68
Query: 360 TTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISRKYGA 539
+ M VWP + KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I RKYG+
Sbjct: 69 RVRYMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKRKYGS 128
Query: 540 TPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIV 719
TPGYYDGRYW MWKLPMFGC +++ VL E+ E K YPKAF+R IGFDN RQVQCISFIV
Sbjct: 129 TPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIV 188
Query: 720 HKP 728
HKP
Sbjct: 189 HKP 191
>gb|ABK26083.1| unknown [Picea sitchensis]
Length = 159
Score = 202 bits (514), Expect = 2e-49
Identities = 97/157 (61%), Positives = 116/157 (73%), Gaps = 1/157 (0%)
Frame = +3
Query: 261 SAVVAPAKTSLMRPLELSKAPSSVAKGIKKS-ASTTKAMLVWPNKDMVKFETLSYLPPLT 437
S+++A + T+ + + AP + G S + M VWP + KFETLSYLP LT
Sbjct: 3 SSIMALSSTAAVAAVA---APPKTSNGNGSSNGGRVRCMQVWPPYNNPKFETLSYLPRLT 59
Query: 438 QEQLSKEIDYLLRNKWVPCLEFDEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALV 617
QEQL KE++YLLRNKWVPCLEFDE+G I RKYG+TPGYYDGRYW MWKLPMFGC +++ V
Sbjct: 60 QEQLLKEVEYLLRNKWVPCLEFDEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQV 119
Query: 618 LREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 728
L E+ E K YPKAF+R IGFDN RQVQCISFIVHKP
Sbjct: 120 LNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 156
>gb|ACN40080.1| unknown [Picea sitchensis]
Length = 183
Score = 202 bits (513), Expect = 2e-49
Identities = 102/180 (56%), Positives = 117/180 (65%), Gaps = 23/180 (12%)
Frame = +3
Query: 258 MSAVVAPAKTSLMRPLELSKAPSSVAKGIKKSAS-----------------------TTK 368
M+AV AP KTS S S G+K +A +
Sbjct: 1 MAAVAAPLKTSNGNGSSSSGNVVSAFTGLKSTAQFPSSMKTNNAGAEWEQKTTSNGGRVR 60
Query: 369 AMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISRKYGATPG 548
M VWP + KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I RKYG+TPG
Sbjct: 61 CMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKRKYGSTPG 120
Query: 549 YYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 728
YYDGRYW MWKLPMFGC +++ VL E+ E K YPKAF+R IGFDN RQVQCISFIVHKP
Sbjct: 121 YYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 180
>gb|ACN39774.1| unknown [Picea sitchensis]
Length = 136
Score = 199 bits (507), Expect = 1e-48
Identities = 89/121 (73%), Positives = 101/121 (83%)
Frame = +3
Query: 366 KAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEGTISRKYGATP 545
+ M VWP + KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G I RKYG+TP
Sbjct: 13 RCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDGIIKRKYGSTP 72
Query: 546 GYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHK 725
GYYDGRYW MWKLPMFGC +++ VL E+ E K YPKAF+R IGFDN RQVQCISFIVHK
Sbjct: 73 GYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVHK 132
Query: 726 P 728
P
Sbjct: 133 P 133
>gb|EMT25898.1| Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic
[Aegilops tauschii]
Length = 170
Score = 196 bits (499), Expect = 9e-48
Identities = 88/142 (61%), Positives = 109/142 (76%)
Frame = +3
Query: 303 LELSKAPSSVAKGIKKSASTTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNK 482
L +S+APS + G + + M VWP + + KFETLSYLPPL+ E L K++DYL+R+K
Sbjct: 20 LPVSRAPSGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSK 79
Query: 483 WVPCLEFDEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAF 662
WVPCLEF + G I R++ A+PGYYDGRYWTMWKLPMFGC D+ V+ E+EEVKKEYP A+
Sbjct: 80 WVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVINEVEEVKKEYPDAY 139
Query: 663 VRCIGFDNNRQVQCISFIVHKP 728
VR IGFDN RQVQC+SFI KP
Sbjct: 140 VRIIGFDNMRQVQCVSFIAFKP 161
>sp|P10053.1|RBS_PINTH RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|20958|emb|CAA31774.1| ribulose bisphosphate
carboxylase preprotein [Pinus thunbergii]
Length = 171
Score = 195 bits (496), Expect = 2e-47
Identities = 89/141 (63%), Positives = 106/141 (75%)
Frame = +3
Query: 306 ELSKAPSSVAKGIKKSASTTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKW 485
++S A + + + + M VWP KFETLSYLP LT+EQL KE++YLLRNKW
Sbjct: 30 KMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKW 89
Query: 486 VPCLEFDEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFV 665
VPCLEFD EG+ISRKY +PGYYDGRYW MWKLPMFGC +++ V+ E+ E K YPKAF+
Sbjct: 90 VPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFI 149
Query: 666 RCIGFDNNRQVQCISFIVHKP 728
R IGFDN RQVQCISFIVHKP
Sbjct: 150 RVIGFDNVRQVQCISFIVHKP 170
>ref|XP_006405770.1| hypothetical protein EUTSA_v10027955mg [Eutrema salsugineum]
gi|557106908|gb|ESQ47223.1| hypothetical protein
EUTSA_v10027955mg [Eutrema salsugineum]
Length = 181
Score = 194 bits (493), Expect = 4e-47
Identities = 89/166 (53%), Positives = 119/166 (71%), Gaps = 10/166 (6%)
Frame = +3
Query: 261 SAVVAPAKTSLMRPLE---------LSKAPSSVAKGIKKSASTTKAMLVWPNKDMVKFET 413
+ V +PA+ +++ P +++ ++ I + M VWP KFET
Sbjct: 10 AVVTSPAQATMVAPFTGLKSSAAFPVTRKTNTDITSIASNGGRVSCMKVWPPIGKKKFET 69
Query: 414 LSYLPPLTQEQLSKEIDYLLRNKWVPCLEFD-EEGTISRKYGATPGYYDGRYWTMWKLPM 590
LSYLP LT+ +L+KE+DYLLRNKW+PC+EF+ E G + R++G+TPGYYDGRYWTMWKLP+
Sbjct: 70 LSYLPDLTEVELAKEVDYLLRNKWIPCVEFELENGFVHREHGSTPGYYDGRYWTMWKLPL 129
Query: 591 FGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 728
FGC DSA VL+E++E KKEYP+AF+R IGFDN RQVQCISFI +KP
Sbjct: 130 FGCTDSAQVLKEVQECKKEYPQAFIRIIGFDNTRQVQCISFIAYKP 175
>emb|CAA30290.1| rubisco ssu precursor [Brassica napus]
Length = 181
Score = 194 bits (493), Expect = 4e-47
Identities = 91/166 (54%), Positives = 117/166 (70%), Gaps = 10/166 (6%)
Frame = +3
Query: 261 SAVVAPAKTSLMRPLELSKAPSSVA---------KGIKKSASTTKAMLVWPNKDMVKFET 413
+ V +PA+ +++ P K+ S+ I + +M VWP KFET
Sbjct: 10 AVVTSPAQATMVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVNSMQVWPPVGKKKFET 69
Query: 414 LSYLPPLTQEQLSKEIDYLLRNKWVPCLEFD-EEGTISRKYGATPGYYDGRYWTMWKLPM 590
LSYLP LT+ +L KE+DYLLRNKW+PC+EF+ E G + R++G+TPGYYDGRYWTMWKLP+
Sbjct: 70 LSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPL 129
Query: 591 FGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 728
FGC DSA VL+E++E K EYP AF+R IGFDNNRQVQCISFI +KP
Sbjct: 130 FGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKP 175
>ref|XP_002868776.1| ribulose bisphosphate carboxylase [Arabidopsis lyrata subsp.
lyrata] gi|297314612|gb|EFH45035.1| ribulose
bisphosphate carboxylase [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 194 bits (493), Expect = 4e-47
Identities = 90/166 (54%), Positives = 117/166 (70%), Gaps = 10/166 (6%)
Frame = +3
Query: 261 SAVVAPAKTSLMRPLE---------LSKAPSSVAKGIKKSASTTKAMLVWPNKDMVKFET 413
+ V +PA+ +++ P +++ ++ I + M VWP KFET
Sbjct: 10 AVVTSPAQATMVAPFSGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWPPIGKKKFET 69
Query: 414 LSYLPPLTQEQLSKEIDYLLRNKWVPCLEFD-EEGTISRKYGATPGYYDGRYWTMWKLPM 590
LSYLP LT +L+KE+DYLLRNKW+PC+EF+ E G + R++G TPGYYDGRYWTMWKLP+
Sbjct: 70 LSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPL 129
Query: 591 FGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 728
FGC DSA VL+E++E KKEYP AF+R IGFDNNRQVQCISFI +KP
Sbjct: 130 FGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKP 175
>ref|XP_002868775.1| ribulose bisphosphate carboxylase small chain 1B [Arabidopsis
lyrata subsp. lyrata] gi|297314611|gb|EFH45034.1|
ribulose bisphosphate carboxylase small chain 1B
[Arabidopsis lyrata subsp. lyrata]
Length = 181
Score = 194 bits (493), Expect = 4e-47
Identities = 90/166 (54%), Positives = 117/166 (70%), Gaps = 10/166 (6%)
Frame = +3
Query: 261 SAVVAPAKTSLMRPLE---------LSKAPSSVAKGIKKSASTTKAMLVWPNKDMVKFET 413
+ V +PA+ +++ P +++ ++ I + M VWP KFET
Sbjct: 10 AVVTSPAQATMVAPFTGLKSSATFPVTRKANNDITSISSNGGRVSCMKVWPPIGKKKFET 69
Query: 414 LSYLPPLTQEQLSKEIDYLLRNKWVPCLEFD-EEGTISRKYGATPGYYDGRYWTMWKLPM 590
LSYLP LT +L+KE+DYLLRNKW+PC+EF+ E G + R++G TPGYYDGRYWTMWKLP+
Sbjct: 70 LSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPL 129
Query: 591 FGCNDSALVLREIEEVKKEYPKAFVRCIGFDNNRQVQCISFIVHKP 728
FGC DSA VL+E++E KKEYP AF+R IGFDNNRQVQCISFI +KP
Sbjct: 130 FGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKP 175
>gb|AAF07942.1|AF192773_1 ribulose-1,5-bisphosphate carboxylase small subunit [Avena
agadiriana]
Length = 168
Score = 194 bits (492), Expect = 6e-47
Identities = 86/135 (63%), Positives = 107/135 (79%)
Frame = +3
Query: 324 SSVAKGIKKSASTTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEF 503
S+ G + + M VWP + + KFETLSYLPPL++E L K+ID+L+R+KWVPCLEF
Sbjct: 27 SNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSEEALLKQIDFLIRSKWVPCLEF 86
Query: 504 DEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFD 683
+ G I R+YG+TPGYYDGRYWTMWKLPMFGC D++ V++E+EEVKKEYP A+VR IGFD
Sbjct: 87 SKVGFIFREYGSTPGYYDGRYWTMWKLPMFGCTDASQVIKEVEEVKKEYPDAYVRIIGFD 146
Query: 684 NNRQVQCISFIVHKP 728
N RQVQC+SFI KP
Sbjct: 147 NIRQVQCVSFIAFKP 161
>gb|AAC67588.1| ribulose-1,5-bisphosphate carboxylase small subunit [Avena sterilis
subsp. ludoviciana]
Length = 168
Score = 194 bits (492), Expect = 6e-47
Identities = 86/135 (63%), Positives = 107/135 (79%)
Frame = +3
Query: 324 SSVAKGIKKSASTTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEF 503
S+ G + + M VWP + + KFETLSYLPPLT+E L K+ID+L+R+KWVPCLEF
Sbjct: 27 SNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLTEEALLKQIDFLIRSKWVPCLEF 86
Query: 504 DEEGTISRKYGATPGYYDGRYWTMWKLPMFGCNDSALVLREIEEVKKEYPKAFVRCIGFD 683
+ G I R++G+TPGYYDGRYWTMWKLPMFGC D++ V++E+EEVKKEYP A+VR IGFD
Sbjct: 87 SQGGFIFREHGSTPGYYDGRYWTMWKLPMFGCTDASQVIKEVEEVKKEYPDAYVRIIGFD 146
Query: 684 NNRQVQCISFIVHKP 728
N RQVQC+SFI KP
Sbjct: 147 NIRQVQCVSFIAFKP 161