BLASTX nr result
ID: Ephedra26_contig00000015
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00000015
(406 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta] 187 1e-45
emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta] 187 1e-45
gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein ... 186 3e-45
emb|CAA57409.1| light harvesting chlorophyll a /b-binding protei... 186 3e-45
emb|CAA57408.1| light harvesting chlorophyll a /b-binding protei... 186 3e-45
gb|ACN40194.1| unknown [Picea sitchensis] 186 3e-45
gb|ABK20976.1| unknown [Picea sitchensis] gi|116779697|gb|ABK213... 186 3e-45
gb|AAC78690.1| chlorophyll a/b-binding protein [Pinus thunbergii] 186 4e-45
sp|P15193.1|CB2A_PINSY RecName: Full=Chlorophyll a-b binding pro... 185 5e-45
gb|AAU89252.1| chloroplast light harvesting chlorophyll a/b bind... 185 6e-45
gb|AAU89261.1| chloroplast light harvesting chlorophyll a/b bind... 185 6e-45
gb|AAU89254.1| chloroplast light harvesting chlorophyll a/b bind... 185 6e-45
gb|AAU89262.1| chloroplast light harvesting chlorophyll a/b bind... 185 6e-45
gb|AAU89264.1| chloroplast light harvesting chlorophyll a/b bind... 185 6e-45
gb|AAU89263.1| chloroplast light harvesting chlorophyll a/b bind... 185 6e-45
prf||1615137B chlorophyll a/b binding protein P27 184 8e-45
sp|P15194.1|CB2B_PINSY RecName: Full=Chlorophyll a-b binding pro... 184 1e-44
gb|AEQ67395.1| chloroplast chlorophyll A/B binding protein [Cana... 184 1e-44
dbj|BAJ15879.1| chlorophyll a/b binding protein-like protein [To... 184 1e-44
gb|ACO51067.1| chloroplast chlorophyll A-B binding protein [Goss... 184 1e-44
>emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 187 bits (475), Expect = 1e-45
Identities = 91/107 (85%), Positives = 94/107 (87%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+V+DPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR
Sbjct: 168 AIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 227
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPVXXXXXXXXXXXAPGK 84
LAMFSMFGFF QAIVTGKGPIENLADHL+DPV PGK
Sbjct: 228 LAMFSMFGFFVQAIVTGKGPIENLADHLADPVSNNAWAYATNFVPGK 274
>emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 187 bits (475), Expect = 1e-45
Identities = 91/107 (85%), Positives = 94/107 (87%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+V+DPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR
Sbjct: 168 AIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 227
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPVXXXXXXXXXXXAPGK 84
LAMFSMFGFF QAIVTGKGPIENLADHL+DPV PGK
Sbjct: 228 LAMFSMFGFFVQAIVTGKGPIENLADHLADPVSNNAWAYATNFVPGK 274
>gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein of photosystem II
[Ginkgo biloba]
Length = 270
Score = 186 bits (472), Expect = 3e-45
Identities = 89/107 (83%), Positives = 94/107 (87%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+++DPIYPGGSFDPLGLADDPDAFAELKVKE+KNGR
Sbjct: 164 AIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGR 223
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPVXXXXXXXXXXXAPGK 84
LAMFSMFGFF QAIVTGKGPIENLADHL+DPV PGK
Sbjct: 224 LAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 270
>emb|CAA57409.1| light harvesting chlorophyll a /b-binding protein Lhcb1*2-2 [Picea
abies]
Length = 275
Score = 186 bits (472), Expect = 3e-45
Identities = 89/107 (83%), Positives = 94/107 (87%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+++DPIYPGGSFDPLGLADDPDAFAELKVKE+KNGR
Sbjct: 169 AIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGR 228
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPVXXXXXXXXXXXAPGK 84
LAMFSMFGFF QAIVTGKGPIENLADHL+DPV PGK
Sbjct: 229 LAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNNAWAYATNFVPGK 275
>emb|CAA57408.1| light harvesting chlorophyll a /b-binding protein Lhcb1*2-1 [Picea
abies]
Length = 274
Score = 186 bits (472), Expect = 3e-45
Identities = 89/107 (83%), Positives = 94/107 (87%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+++DPIYPGGSFDPLGLADDPDAFAELKVKE+KNGR
Sbjct: 168 AIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGR 227
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPVXXXXXXXXXXXAPGK 84
LAMFSMFGFF QAIVTGKGPIENLADHL+DPV PGK
Sbjct: 228 LAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNNAWAYATNFVPGK 274
>gb|ACN40194.1| unknown [Picea sitchensis]
Length = 274
Score = 186 bits (472), Expect = 3e-45
Identities = 89/107 (83%), Positives = 94/107 (87%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+++DPIYPGGSFDPLGLADDPDAFAELKVKE+KNGR
Sbjct: 168 AIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGR 227
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPVXXXXXXXXXXXAPGK 84
LAMFSMFGFF QAIVTGKGPIENLADHL+DPV PGK
Sbjct: 228 LAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
>gb|ABK20976.1| unknown [Picea sitchensis] gi|116779697|gb|ABK21395.1| unknown
[Picea sitchensis] gi|116790882|gb|ABK25775.1| unknown
[Picea sitchensis] gi|148908056|gb|ABR17147.1| unknown
[Picea sitchensis] gi|148908517|gb|ABR17370.1| unknown
[Picea sitchensis] gi|224284311|gb|ACN39891.1| unknown
[Picea sitchensis] gi|224284945|gb|ACN40202.1| unknown
[Picea sitchensis] gi|224285575|gb|ACN40506.1| unknown
[Picea sitchensis] gi|224285579|gb|ACN40508.1| unknown
[Picea sitchensis]
Length = 274
Score = 186 bits (472), Expect = 3e-45
Identities = 89/107 (83%), Positives = 94/107 (87%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+++DPIYPGGSFDPLGLADDPDAFAELKVKE+KNGR
Sbjct: 168 AIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGR 227
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPVXXXXXXXXXXXAPGK 84
LAMFSMFGFF QAIVTGKGPIENLADHL+DPV PGK
Sbjct: 228 LAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
>gb|AAC78690.1| chlorophyll a/b-binding protein [Pinus thunbergii]
Length = 274
Score = 186 bits (471), Expect = 4e-45
Identities = 90/107 (84%), Positives = 93/107 (86%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+V+DPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR
Sbjct: 168 AIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 227
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPVXXXXXXXXXXXAPGK 84
LAMFSMFGFF QAIVTGKGPIENL DHL+DPV PGK
Sbjct: 228 LAMFSMFGFFVQAIVTGKGPIENLTDHLADPVNNNAWAYATNFVPGK 274
>sp|P15193.1|CB2A_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 1A,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type II 1A; Short=CAB; AltName: Full=LHCP;
Flags: Precursor gi|20661|emb|CAA32657.1| unnamed
protein product [Pinus sylvestris]
Length = 278
Score = 185 bits (470), Expect = 5e-45
Identities = 88/107 (82%), Positives = 94/107 (87%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGA+EGYR+AGGPLG+V+DPIYPGG+FDPLGLADDPDAFAELKVKEIKNGR
Sbjct: 172 AIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGR 231
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPVXXXXXXXXXXXAPGK 84
LAMFSMFGFF QAIVTGKGPIENLADHL+DPV PGK
Sbjct: 232 LAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
>gb|AAU89252.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus radiata]
Length = 256
Score = 185 bits (469), Expect = 6e-45
Identities = 88/92 (95%), Positives = 91/92 (98%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+V+DPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR
Sbjct: 165 AIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 224
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPV 129
LAMFSMFGFF QAIVTGKGPIENLADHL+DPV
Sbjct: 225 LAMFSMFGFFVQAIVTGKGPIENLADHLADPV 256
>gb|AAU89261.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus monophylla]
Length = 256
Score = 185 bits (469), Expect = 6e-45
Identities = 88/92 (95%), Positives = 91/92 (98%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+V+DPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR
Sbjct: 165 AIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 224
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPV 129
LAMFSMFGFF QAIVTGKGPIENLADHL+DPV
Sbjct: 225 LAMFSMFGFFVQAIVTGKGPIENLADHLADPV 256
>gb|AAU89254.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus merkusii]
Length = 256
Score = 185 bits (469), Expect = 6e-45
Identities = 88/92 (95%), Positives = 91/92 (98%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+V+DPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR
Sbjct: 165 AIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 224
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPV 129
LAMFSMFGFF QAIVTGKGPIENLADHL+DPV
Sbjct: 225 LAMFSMFGFFVQAIVTGKGPIENLADHLADPV 256
>gb|AAU89262.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus remota]
Length = 256
Score = 185 bits (469), Expect = 6e-45
Identities = 88/92 (95%), Positives = 91/92 (98%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+V+DPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR
Sbjct: 165 AIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 224
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPV 129
LAMFSMFGFF QAIVTGKGPIENLADHL+DPV
Sbjct: 225 LAMFSMFGFFVQAIVTGKGPIENLADHLADPV 256
>gb|AAU89264.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus nelsonii]
Length = 256
Score = 185 bits (469), Expect = 6e-45
Identities = 88/92 (95%), Positives = 91/92 (98%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+V+DPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR
Sbjct: 165 AIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 224
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPV 129
LAMFSMFGFF QAIVTGKGPIENLADHL+DPV
Sbjct: 225 LAMFSMFGFFVQAIVTGKGPIENLADHLADPV 256
>gb|AAU89263.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus longaeva]
Length = 253
Score = 185 bits (469), Expect = 6e-45
Identities = 88/92 (95%), Positives = 91/92 (98%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+V+DPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR
Sbjct: 162 AIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 221
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPV 129
LAMFSMFGFF QAIVTGKGPIENLADHL+DPV
Sbjct: 222 LAMFSMFGFFVQAIVTGKGPIENLADHLADPV 253
>prf||1615137B chlorophyll a/b binding protein P27
Length = 233
Score = 184 bits (468), Expect = 8e-45
Identities = 87/107 (81%), Positives = 94/107 (87%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGA+EGYR+AGGPLG+V+DPIYPGG+FDPLGLADDPDAFAELKVKEIKNGR
Sbjct: 127 AIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGR 186
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPVXXXXXXXXXXXAPGK 84
LAMFSMFGFF QAIVTGKGPIENLADH++DPV PGK
Sbjct: 187 LAMFSMFGFFVQAIVTGKGPIENLADHIADPVNNNAWAYATNFVPGK 233
>sp|P15194.1|CB2B_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 1B,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type II 1B; Short=CAB; AltName: Full=LHCP;
Flags: Precursor gi|20665|emb|CAA32658.1| unnamed
protein product [Pinus sylvestris]
Length = 274
Score = 184 bits (467), Expect = 1e-44
Identities = 89/107 (83%), Positives = 94/107 (87%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+V+DPIYPGGSFDPLGLA+DP+AFAELKVKEIKNGR
Sbjct: 168 AIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGR 227
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPVXXXXXXXXXXXAPGK 84
LAMFSMFGFF QAIVTGKGPIENLADHL+DPV PGK
Sbjct: 228 LAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
>gb|AEQ67395.1| chloroplast chlorophyll A/B binding protein [Canarium album]
Length = 264
Score = 184 bits (467), Expect = 1e-44
Identities = 88/107 (82%), Positives = 94/107 (87%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+V+DP+YPGGSFDPLGLADDP+AFAELKVKEIKNGR
Sbjct: 158 AIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGR 217
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPVXXXXXXXXXXXAPGK 84
LAMFSMFGFF QAIVTGKGP+ENLADHL+DPV PGK
Sbjct: 218 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>dbj|BAJ15879.1| chlorophyll a/b binding protein-like protein [Torenia fournieri]
Length = 129
Score = 184 bits (467), Expect = 1e-44
Identities = 88/107 (82%), Positives = 94/107 (87%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+V+DP+YPGGSFDPLGLADDP+AFAELKVKEIKNGR
Sbjct: 23 AIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGR 82
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPVXXXXXXXXXXXAPGK 84
LAMFSMFGFF QAIVTGKGP+ENLADHL+DPV PGK
Sbjct: 83 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 129
>gb|ACO51067.1| chloroplast chlorophyll A-B binding protein [Gossypium hirsutum]
Length = 264
Score = 184 bits (467), Expect = 1e-44
Identities = 88/107 (82%), Positives = 94/107 (87%)
Frame = -3
Query: 404 AIWACQVILMGAVEGYRIAGGPLGDVSDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGR 225
AIWACQVILMGAVEGYRIAGGPLG+V+DP+YPGGSFDPLGLADDP+AFAELKVKEIKNGR
Sbjct: 158 AIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGR 217
Query: 224 LAMFSMFGFFTQAIVTGKGPIENLADHLSDPVXXXXXXXXXXXAPGK 84
LAMFSMFGFF QAIVTGKGP+ENLADHL+DPV PGK
Sbjct: 218 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264