BLASTX nr result
ID: Ephedra26_contig00000014
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra26_contig00000014
(1089 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC78690.1| chlorophyll a/b-binding protein [Pinus thunbergii] 463 e-128
gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum... 462 e-127
gb|AAB61236.1| chlorophyll a/b-binding protein [Mesembryanthemum... 461 e-127
gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum... 461 e-127
emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta] 460 e-127
emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta] 460 e-127
sp|P15194.1|CB2B_PINSY RecName: Full=Chlorophyll a-b binding pro... 460 e-127
gb|ABK20976.1| unknown [Picea sitchensis] gi|116779697|gb|ABK213... 460 e-127
ref|XP_006361530.1| PREDICTED: chlorophyll a-b binding protein 3... 459 e-127
gb|ACY66805.1| chlorophyll a/b-binding protein [Pinus massoniana] 459 e-127
sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro... 459 e-127
gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein ... 459 e-127
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S... 459 e-127
gb|ACN40194.1| unknown [Picea sitchensis] 458 e-126
sp|P15193.1|CB2A_PINSY RecName: Full=Chlorophyll a-b binding pro... 457 e-126
sp|P27495.1|CB24_TOBAC RecName: Full=Chlorophyll a-b binding pro... 457 e-126
emb|CAA57408.1| light harvesting chlorophyll a /b-binding protei... 457 e-126
gb|ABF70112.1| chlorophyll A-B binding protein (CAB), putative [... 457 e-126
sp|P04782.1|CB24_PETSP RecName: Full=Chlorophyll a-b binding pro... 456 e-126
emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 pr... 456 e-126
>gb|AAC78690.1| chlorophyll a/b-binding protein [Pinus thunbergii]
Length = 274
Score = 463 bits (1191), Expect = e-128
Identities = 220/244 (90%), Positives = 227/244 (93%)
Frame = -3
Query: 982 AALKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 803
A + GE++ T R KKV+ S SPWYGPDRV YLGPFSGE PSYLTGEFPGDYGWDT
Sbjct: 31 AGVHGEARVTMRKATTKKVSASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90
Query: 802 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 623
AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG
Sbjct: 91 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 150
Query: 622 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVNDPIYPGGSFDPLGLAD 443
GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLG+V DPIYPGGSFDPLGLAD
Sbjct: 151 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAD 210
Query: 442 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 263
DPDAFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGPIENL DHLADPVNNNAWA+ATNF
Sbjct: 211 DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLTDHLADPVNNNAWAYATNF 270
Query: 262 VPGK 251
VPGK
Sbjct: 271 VPGK 274
>gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 462 bits (1189), Expect = e-127
Identities = 220/245 (89%), Positives = 231/245 (94%)
Frame = -3
Query: 985 SAALKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD 806
++ + GE + T R T GK VS+ DSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD
Sbjct: 24 TSQILGEGRITMRKTAGKTKNVSS-DSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD 82
Query: 805 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 626
TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE
Sbjct: 83 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 142
Query: 625 GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVNDPIYPGGSFDPLGLA 446
GGLDYLGNPSLVHAQSILAIWACQVILMGA+EGYRVAGGPLG+V DP+YPGGSFDPLGLA
Sbjct: 143 GGLDYLGNPSLVHAQSILAIWACQVILMGAIEGYRVAGGPLGEVIDPLYPGGSFDPLGLA 202
Query: 445 DDPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATN 266
+DP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWAFATN
Sbjct: 203 EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATN 262
Query: 265 FVPGK 251
F PGK
Sbjct: 263 FAPGK 267
>gb|AAB61236.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 461 bits (1186), Expect = e-127
Identities = 218/240 (90%), Positives = 228/240 (95%)
Frame = -3
Query: 970 GESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 791
GE + T R GK V+T DSPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWDTAGLS
Sbjct: 29 GEGRITMRKAAGKS-KVATIDSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87
Query: 790 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDY 611
ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDY
Sbjct: 88 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDY 147
Query: 610 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVNDPIYPGGSFDPLGLADDPDA 431
LGNPSLVHAQSILAIWACQV+LMGA+EGYRVAGGPLG+V DP+YPGGSFDPLGLA+DP+A
Sbjct: 148 LGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLAEDPEA 207
Query: 430 FAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 251
FAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWAFATNFVPGK
Sbjct: 208 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 461 bits (1186), Expect = e-127
Identities = 218/245 (88%), Positives = 231/245 (94%)
Frame = -3
Query: 985 SAALKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD 806
++ + GE + T R T GK +VS+ DSPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWD
Sbjct: 24 ASEILGEGRITMRKTAGKTKSVSS-DSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 82
Query: 805 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 626
TAGLSADPETF KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE
Sbjct: 83 TAGLSADPETFTKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 142
Query: 625 GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVNDPIYPGGSFDPLGLA 446
GGLDYLGNPSLVHAQSILAIWACQVILMGA+EGYRVAGGPLG+V DP+YPGGSFDPLGLA
Sbjct: 143 GGLDYLGNPSLVHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLA 202
Query: 445 DDPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATN 266
+DP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWAFATN
Sbjct: 203 EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATN 262
Query: 265 FVPGK 251
F PGK
Sbjct: 263 FAPGK 267
>emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 460 bits (1184), Expect = e-127
Identities = 220/244 (90%), Positives = 228/244 (93%)
Frame = -3
Query: 982 AALKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 803
A + GE++ T R KKV+VS SPWYGPDRV YLGPFSGE PSYLTGEFPGDYGWDT
Sbjct: 31 AGVHGEARVTMRKAATKKVSVSASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90
Query: 802 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 623
AGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG
Sbjct: 91 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 150
Query: 622 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVNDPIYPGGSFDPLGLAD 443
GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLG+V DPIYPGGSFDPLGLAD
Sbjct: 151 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAD 210
Query: 442 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 263
DPDAFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGPIENLADHLADPV+NNAWA+ATNF
Sbjct: 211 DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVSNNAWAYATNF 270
Query: 262 VPGK 251
VPGK
Sbjct: 271 VPGK 274
>emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 460 bits (1184), Expect = e-127
Identities = 220/244 (90%), Positives = 228/244 (93%)
Frame = -3
Query: 982 AALKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 803
A + GE++ T R KKV+VS SPWYGPDRV YLGPFSGE PSYLTGEFPGDYGWDT
Sbjct: 31 AGVHGEARVTMRKATTKKVSVSASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90
Query: 802 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 623
AGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG
Sbjct: 91 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 150
Query: 622 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVNDPIYPGGSFDPLGLAD 443
GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLG+V DPIYPGGSFDPLGLAD
Sbjct: 151 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAD 210
Query: 442 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 263
DPDAFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGPIENLADHLADPV+NNAWA+ATNF
Sbjct: 211 DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVSNNAWAYATNF 270
Query: 262 VPGK 251
VPGK
Sbjct: 271 VPGK 274
>sp|P15194.1|CB2B_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 1B,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type II 1B; Short=CAB; AltName: Full=LHCP;
Flags: Precursor gi|20665|emb|CAA32658.1| unnamed
protein product [Pinus sylvestris]
Length = 274
Score = 460 bits (1183), Expect = e-127
Identities = 218/244 (89%), Positives = 227/244 (93%)
Frame = -3
Query: 982 AALKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 803
A + GE++ T R KK+T S SPWYGPDRV YLGPFSGE PSYLTGEFPGDYGWDT
Sbjct: 31 AGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90
Query: 802 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 623
AGLSADPE FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG
Sbjct: 91 AGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 150
Query: 622 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVNDPIYPGGSFDPLGLAD 443
GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLG+V DPIYPGGSFDPLGLA+
Sbjct: 151 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAE 210
Query: 442 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 263
DP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGPIENLADHLADPVNNNAWA+ATNF
Sbjct: 211 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNF 270
Query: 262 VPGK 251
VPGK
Sbjct: 271 VPGK 274
>gb|ABK20976.1| unknown [Picea sitchensis] gi|116779697|gb|ABK21395.1| unknown
[Picea sitchensis] gi|116790882|gb|ABK25775.1| unknown
[Picea sitchensis] gi|148908056|gb|ABR17147.1| unknown
[Picea sitchensis] gi|148908517|gb|ABR17370.1| unknown
[Picea sitchensis] gi|224284311|gb|ACN39891.1| unknown
[Picea sitchensis] gi|224284945|gb|ACN40202.1| unknown
[Picea sitchensis] gi|224285575|gb|ACN40506.1| unknown
[Picea sitchensis] gi|224285579|gb|ACN40508.1| unknown
[Picea sitchensis]
Length = 274
Score = 460 bits (1183), Expect = e-127
Identities = 218/244 (89%), Positives = 228/244 (93%)
Frame = -3
Query: 982 AALKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 803
A + GE++ T R + KKV+ S SPWYGPDRV YLGPFSGE PSYLTGEFPGDYGWDT
Sbjct: 31 AGVHGEARVTMRKSSTKKVSASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90
Query: 802 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 623
AGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG
Sbjct: 91 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 150
Query: 622 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVNDPIYPGGSFDPLGLAD 443
GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLG++ DPIYPGGSFDPLGLAD
Sbjct: 151 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLAD 210
Query: 442 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 263
DPDAFAELKVKE+KNGRLAMFSMFGFF QAIVTGKGPIENLADHLADPVNNNAWA+ATNF
Sbjct: 211 DPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNF 270
Query: 262 VPGK 251
VPGK
Sbjct: 271 VPGK 274
>ref|XP_006361530.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform X1 [Solanum tuberosum]
gi|565391644|ref|XP_006361531.1| PREDICTED: chlorophyll
a-b binding protein 3C, chloroplastic-like isoform X2
[Solanum tuberosum]
Length = 267
Score = 459 bits (1182), Expect = e-127
Identities = 219/245 (89%), Positives = 230/245 (93%)
Frame = -3
Query: 985 SAALKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD 806
S+ + G +FT R T K VS+ SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD
Sbjct: 24 SSEITGNGRFTMRKTATKAKPVSS-GSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD 82
Query: 805 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 626
TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSE
Sbjct: 83 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 142
Query: 625 GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVNDPIYPGGSFDPLGLA 446
GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLG+V DP+YPGGSFDPLGLA
Sbjct: 143 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 202
Query: 445 DDPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATN 266
DDP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWAFATN
Sbjct: 203 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATN 262
Query: 265 FVPGK 251
FVPGK
Sbjct: 263 FVPGK 267
>gb|ACY66805.1| chlorophyll a/b-binding protein [Pinus massoniana]
Length = 274
Score = 459 bits (1182), Expect = e-127
Identities = 218/244 (89%), Positives = 226/244 (92%)
Frame = -3
Query: 982 AALKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 803
A + GE++ T R KKV+ S SPWYGPDRV YLGPFSGE PSYLTGEFPGDYGWDT
Sbjct: 31 AGVHGEARVTMRKATTKKVSASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90
Query: 802 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 623
AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG
Sbjct: 91 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 150
Query: 622 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVNDPIYPGGSFDPLGLAD 443
GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLG+V DPIYPGGSFDPLGLAD
Sbjct: 151 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAD 210
Query: 442 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 263
DPDAFAELKVKEIKNGRL MFSMFGFF QAIVTGKGPIE+LADHLADPVNNNAWA+ TNF
Sbjct: 211 DPDAFAELKVKEIKNGRLTMFSMFGFFVQAIVTGKGPIEDLADHLADPVNNNAWAYGTNF 270
Query: 262 VPGK 251
VPGK
Sbjct: 271 VPGK 274
>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
binding protein precursor [Spinacia oleracea]
gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
binding protein LHCb1.3 [Spinacia oleracea]
Length = 267
Score = 459 bits (1181), Expect = e-127
Identities = 223/264 (84%), Positives = 236/264 (89%), Gaps = 8/264 (3%)
Frame = -3
Query: 1018 TSRVSSGRMSGSAA--------LKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPF 863
T +SS ++G A + GE + T R T GK TV + SPWYGPDRVKYLGPF
Sbjct: 5 TMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQS-SSPWYGPDRVKYLGPF 63
Query: 862 SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 683
SGE+PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 64 SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 123
Query: 682 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPL 503
GVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPL
Sbjct: 124 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPL 183
Query: 502 GDVNDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIEN 323
G+V DP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+EN
Sbjct: 184 GEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 243
Query: 322 LADHLADPVNNNAWAFATNFVPGK 251
LADHLADPVNNNAW FATNFVPGK
Sbjct: 244 LADHLADPVNNNAWNFATNFVPGK 267
>gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein of photosystem II
[Ginkgo biloba]
Length = 270
Score = 459 bits (1181), Expect = e-127
Identities = 222/263 (84%), Positives = 234/263 (88%), Gaps = 10/263 (3%)
Frame = -3
Query: 1009 VSSGRMSGSAALK----------GESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFS 860
V+S +G LK GE + T R T KKV S+ SPWYGPDRVKYLGPFS
Sbjct: 9 VASSAFAGQIVLKPQNEFVGGVHGEGRITMRKTASKKVVASS-GSPWYGPDRVKYLGPFS 67
Query: 859 GEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 680
GEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNG
Sbjct: 68 GEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 127
Query: 679 VKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 500
VKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLG
Sbjct: 128 VKFGEAVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLG 187
Query: 499 DVNDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENL 320
++ DPIYPGGSFDPLGLADDPDAFAELKVKE+KNGRLAMFSMFGFF QAIVTGKGPIENL
Sbjct: 188 EITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 247
Query: 319 ADHLADPVNNNAWAFATNFVPGK 251
ADHLADPVNNNAWAFATNFVPGK
Sbjct: 248 ADHLADPVNNNAWAFATNFVPGK 270
>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
Length = 267
Score = 459 bits (1181), Expect = e-127
Identities = 223/264 (84%), Positives = 237/264 (89%), Gaps = 8/264 (3%)
Frame = -3
Query: 1018 TSRVSSGRMSGSAA--------LKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPF 863
T +SS ++G A + GE + T R T GK VS+ SPWYGPDRVKYLGPF
Sbjct: 5 TMALSSPSLAGKAIKLGPTASEILGEGRVTMRKTAGKPKNVSS-GSPWYGPDRVKYLGPF 63
Query: 862 SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 683
SGEAPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 64 SGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARN 123
Query: 682 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPL 503
GVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPL
Sbjct: 124 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPL 183
Query: 502 GDVNDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIEN 323
G+V DP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+EN
Sbjct: 184 GEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 243
Query: 322 LADHLADPVNNNAWAFATNFVPGK 251
LADHLADPVNNNAW+FATNFVPGK
Sbjct: 244 LADHLADPVNNNAWSFATNFVPGK 267
>gb|ACN40194.1| unknown [Picea sitchensis]
Length = 274
Score = 458 bits (1178), Expect = e-126
Identities = 217/244 (88%), Positives = 228/244 (93%)
Frame = -3
Query: 982 AALKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 803
A + GE++ T R + KKV+ S SPWYGPDRV YLGPFSGE PS+LTGEFPGDYGWDT
Sbjct: 31 AGVHGEARVTMRKSSTKKVSASASTSPWYGPDRVLYLGPFSGEPPSHLTGEFPGDYGWDT 90
Query: 802 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 623
AGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG
Sbjct: 91 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 150
Query: 622 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVNDPIYPGGSFDPLGLAD 443
GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLG++ DPIYPGGSFDPLGLAD
Sbjct: 151 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLAD 210
Query: 442 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 263
DPDAFAELKVKE+KNGRLAMFSMFGFF QAIVTGKGPIENLADHLADPVNNNAWA+ATNF
Sbjct: 211 DPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNF 270
Query: 262 VPGK 251
VPGK
Sbjct: 271 VPGK 274
>sp|P15193.1|CB2A_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 1A,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type II 1A; Short=CAB; AltName: Full=LHCP; Flags:
Precursor gi|20661|emb|CAA32657.1| unnamed protein
product [Pinus sylvestris]
Length = 278
Score = 457 bits (1177), Expect = e-126
Identities = 216/251 (86%), Positives = 229/251 (91%)
Frame = -3
Query: 1003 SGRMSGSAALKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFSGEAPSYLTGEFP 824
+ ++ G GE++ T R GKK ++ DSPWYGPDRV YLGPFSGE PSYLTGEFP
Sbjct: 28 NNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFP 87
Query: 823 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 644
GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG
Sbjct: 88 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 147
Query: 643 AQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVNDPIYPGGSF 464
AQIFSEGGLDYLG+P L+HAQSILAIWACQVILMGA+EGYRVAGGPLG+V DPIYPGG+F
Sbjct: 148 AQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNF 207
Query: 463 DPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNA 284
DPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGPIENLADHLADPVNNNA
Sbjct: 208 DPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNA 267
Query: 283 WAFATNFVPGK 251
WA+ATNFVPGK
Sbjct: 268 WAYATNFVPGK 278
>sp|P27495.1|CB24_TOBAC RecName: Full=Chlorophyll a-b binding protein 40, chloroplastic;
AltName: Full=LHCII type I CAB-40; Short=LHCP; Flags:
Precursor gi|19829|emb|CAA36958.1| unnamed protein
product [Nicotiana tabacum]
Length = 267
Score = 457 bits (1177), Expect = e-126
Identities = 218/245 (88%), Positives = 230/245 (93%)
Frame = -3
Query: 985 SAALKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD 806
S+ + G K T R T K TVS+ SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWD
Sbjct: 24 SSEITGNGKVTMRKTASKAKTVSS-GSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 82
Query: 805 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 626
TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSE
Sbjct: 83 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 142
Query: 625 GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVNDPIYPGGSFDPLGLA 446
GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLG+V DP+YPGGSFDPLGLA
Sbjct: 143 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLA 202
Query: 445 DDPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATN 266
+DP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWA+ATN
Sbjct: 203 EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 262
Query: 265 FVPGK 251
FVPGK
Sbjct: 263 FVPGK 267
>emb|CAA57408.1| light harvesting chlorophyll a /b-binding protein Lhcb1*2-1 [Picea
abies]
Length = 274
Score = 457 bits (1176), Expect = e-126
Identities = 216/244 (88%), Positives = 227/244 (93%)
Frame = -3
Query: 982 AALKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDT 803
A + GE++ T R + KKV+ S SPWYGPDRV YLGPFSGE PSYLTGEFPGDYGWDT
Sbjct: 31 AGVHGEARVTMRKSSTKKVSASASPSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90
Query: 802 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 623
AGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG
Sbjct: 91 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 150
Query: 622 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVNDPIYPGGSFDPLGLAD 443
GLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLG++ DPIYPGGSFDPLGLAD
Sbjct: 151 GLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLAD 210
Query: 442 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 263
DPDAFAELKVKE+KNGRLAMFSMFGFF QAIVTGKGPIENLADHLADPV NNAWA+ATNF
Sbjct: 211 DPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNNAWAYATNF 270
Query: 262 VPGK 251
VPGK
Sbjct: 271 VPGK 274
>gb|ABF70112.1| chlorophyll A-B binding protein (CAB), putative [Musa balbisiana]
Length = 267
Score = 457 bits (1176), Expect = e-126
Identities = 219/264 (82%), Positives = 233/264 (88%), Gaps = 8/264 (3%)
Frame = -3
Query: 1018 TSRVSSGRMSGSAA--------LKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPF 863
T +SS ++G A + GE + T R + K + SPWYGPDRVKYLGPF
Sbjct: 4 TMALSSPSLAGKAVKLAPSASDVLGEGRVTMRKSTAKAKPAAASGSPWYGPDRVKYLGPF 63
Query: 862 SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 683
SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 64 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 123
Query: 682 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPL 503
GVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPL
Sbjct: 124 GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPL 183
Query: 502 GDVNDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIEN 323
G+V DP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+EN
Sbjct: 184 GEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 243
Query: 322 LADHLADPVNNNAWAFATNFVPGK 251
LADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 LADHLADPVNNNAWAYATNFVPGK 267
>sp|P04782.1|CB24_PETSP RecName: Full=Chlorophyll a-b binding protein 25, chloroplastic;
AltName: Full=LHCII type I CAB-25; Short=LHCP; Flags:
Precursor gi|20483|emb|CAA26211.1| unnamed protein
product [Petunia sp.]
Length = 266
Score = 456 bits (1174), Expect = e-126
Identities = 223/263 (84%), Positives = 233/263 (88%), Gaps = 7/263 (2%)
Frame = -3
Query: 1018 TSRVSSGRMSGSAA-------LKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFS 860
T +SS +G A + G K T R T K VS+ SPWYGPDRVKYLGPFS
Sbjct: 5 TMAISSSSFAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSS-GSPWYGPDRVKYLGPFS 63
Query: 859 GEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 680
GEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNG
Sbjct: 64 GEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNG 123
Query: 679 VKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 500
VKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLG
Sbjct: 124 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 183
Query: 499 DVNDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENL 320
+V DP+YPGGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENL
Sbjct: 184 EVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 243
Query: 319 ADHLADPVNNNAWAFATNFVPGK 251
ADHLADPVNNNAWAFATNFVPGK
Sbjct: 244 ADHLADPVNNNAWAFATNFVPGK 266
>emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
oleracea]
Length = 267
Score = 456 bits (1174), Expect = e-126
Identities = 217/245 (88%), Positives = 230/245 (93%)
Frame = -3
Query: 985 SAALKGESKFTTRATRGKKVTVSTPDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD 806
++ + E + T R T GK VS+ SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD
Sbjct: 24 ASEILSEGRVTMRKTAGKPKNVSS-GSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD 82
Query: 805 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 626
TAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSE
Sbjct: 83 TAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 142
Query: 625 GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVNDPIYPGGSFDPLGLA 446
GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLG+V DP+YPGGSFDPLGLA
Sbjct: 143 GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 202
Query: 445 DDPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATN 266
DDP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAW+FATN
Sbjct: 203 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSFATN 262
Query: 265 FVPGK 251
FVPGK
Sbjct: 263 FVPGK 267