BLASTX nr result

ID: Ephedra25_contig00029206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00029206
         (724 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593151.1| F-box family-6 [Medicago truncatula] gi|3554...    58   4e-06

>ref|XP_003593151.1| F-box family-6 [Medicago truncatula] gi|355482199|gb|AES63402.1|
           F-box family-6 [Medicago truncatula]
          Length = 445

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 5/217 (2%)
 Frame = -1

Query: 661 FHCAKMANVDRLSPLPDDLLMRILCLAKSYKAAVVCSSVALRFRHLYRNLPCIYLRKNDF 482
           F     A +DRL  LPDD+L RIL    + K AV  S ++ R+ HL+R +P +     DF
Sbjct: 43  FQTTTTAAMDRLGSLPDDILTRILSSVPT-KQAVATSILSKRWIHLWRYVPVL-----DF 96

Query: 481 YKPTMTPSSSFQXXXXXXXXXXXXDAINRISASVIHGHQGSLHTFSLDAWFCHFDIWASS 302
            +  M    S +                   A+  H    S++TF L        I A  
Sbjct: 97  TETNMEDLESVRRFKEFVSSFLLLR-----KAAGNH----SINTFILGIQRYSSPIHAPG 147

Query: 301 LDYLLCHHHIEHLSVILWHCHTSPHIPLCVFDCHSLLTLTMEFFNIHQIPDTFQGFPNLR 122
            +YL       + + ++     +P +P+ +  C +L+ L + +F   +  ++   FP+L+
Sbjct: 148 DNYLDMMRRTTYHNTLIRKLTLAPSLPISILTCTTLVVLKLRWFWFFKDANSHYNFPSLK 207

Query: 121 DCNLCLEFFCDDDIKI-----FTSLLPTCPALQNLKL 26
             +L        DI +     FT LL  CP L++L+L
Sbjct: 208 TLHL-------KDIYLHHQHEFTFLLDACPLLEDLQL 237


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