BLASTX nr result

ID: Ephedra25_contig00029203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00029203
         (462 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY91117.1| hypothetical protein OsI_12726 [Oryza sativa Indi...    73   3e-11
ref|NP_001050715.1| Os03g0633900 [Oryza sativa Japonica Group] g...    73   3e-11
ref|XP_003590533.1| Single-stranded DNA-binding protein [Medicag...    72   6e-11
ref|XP_003562210.1| PREDICTED: protein OSB1, mitochondrial-like ...    72   8e-11
ref|XP_006361790.1| PREDICTED: protein OSB2, chloroplastic-like ...    72   1e-10
gb|AAX34397.1| mitochondrial SBP40 [Solanum tuberosum]                 72   1e-10
ref|NP_001148836.1| single-strand binding protein [Zea mays] gi|...    72   1e-10
gb|ACF87480.1| unknown [Zea mays] gi|413933637|gb|AFW68188.1| si...    72   1e-10
ref|XP_004982374.1| PREDICTED: protein OSB2, chloroplastic-like ...    71   1e-10
ref|XP_002464207.1| hypothetical protein SORBIDRAFT_01g014110 [S...    71   1e-10
gb|ACR37929.1| unknown [Zea mays] gi|414871826|tpg|DAA50383.1| T...    71   1e-10
ref|XP_006651616.1| PREDICTED: protein OSB1, mitochondrial-like,...    70   2e-10
ref|XP_003536815.2| PREDICTED: protein OSB2, chloroplastic-like ...    70   3e-10
gb|ESW16682.1| hypothetical protein PHAVU_007G176800g [Phaseolus...    69   6e-10
ref|NP_001150313.1| single-strand binding protein [Zea mays] gi|...    69   8e-10
dbj|BAK00498.1| predicted protein [Hordeum vulgare subsp. vulgare]     68   1e-09
dbj|BAK01550.1| predicted protein [Hordeum vulgare subsp. vulgare]     68   1e-09
ref|XP_004246681.1| PREDICTED: protein OSB2, chloroplastic-like ...    67   2e-09
ref|XP_003518896.1| PREDICTED: protein OSB2, chloroplastic-like ...    67   2e-09
ref|XP_002529526.1| hypothetical protein RCOM_1716690 [Ricinus c...    67   2e-09

>gb|EAY91117.1| hypothetical protein OsI_12726 [Oryza sativa Indica Group]
          Length = 311

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -2

Query: 368 SESTWSALFINPSKWLDERPTKKNPRAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENE 189
           +E  W A F NP  W D R  KKNPR  DFKHK TG  L +D  + P WV+S L+ L++ 
Sbjct: 221 TEQLWQAFFANPLDWWDNRTNKKNPRYPDFKHKHTGEALWVDGRNNPNWVISQLAILDSR 280

Query: 188 AFSHLSTSDRRP-EFLFVD 135
             S L  +DR+P  F++ D
Sbjct: 281 MGS-LQGNDRKPVAFMYAD 298


>ref|NP_001050715.1| Os03g0633900 [Oryza sativa Japonica Group]
           gi|41469492|gb|AAS07277.1| putative single-strand
           binding protein [Oryza sativa Japonica Group]
           gi|108709977|gb|ABF97772.1| single-strand binding
           protein, expressed [Oryza sativa Japonica Group]
           gi|113549186|dbj|BAF12629.1| Os03g0633900 [Oryza sativa
           Japonica Group] gi|125587206|gb|EAZ27870.1| hypothetical
           protein OsJ_11823 [Oryza sativa Japonica Group]
           gi|215686917|dbj|BAG90787.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765214|dbj|BAG86911.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 311

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -2

Query: 368 SESTWSALFINPSKWLDERPTKKNPRAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENE 189
           +E  W A F NP  W D R  KKNPR  DFKHK TG  L +D  + P WV+S L+ L++ 
Sbjct: 221 TEQLWQAFFANPFDWWDNRTNKKNPRYPDFKHKHTGEALWVDGRNNPNWVISQLAILDSR 280

Query: 188 AFSHLSTSDRRP-EFLFVD 135
             S L  +DR+P  F++ D
Sbjct: 281 MGS-LQGNDRKPVAFMYAD 298


>ref|XP_003590533.1| Single-stranded DNA-binding protein [Medicago truncatula]
           gi|355479581|gb|AES60784.1| Single-stranded DNA-binding
           protein [Medicago truncatula]
          Length = 291

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 33/68 (48%), Positives = 40/68 (58%)
 Frame = -2

Query: 356 WSALFINPSKWLDERPTKKNPRAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENEAFSH 177
           W A F NP +W D R  K+NP+A DFKHK+TG  L ID  STP WV S L  L+    S+
Sbjct: 212 WQAFFANPGEWWDNRRNKRNPKAPDFKHKDTGEALWIDGRSTPPWVKSQLEILDMRMGSY 271

Query: 176 LSTSDRRP 153
              + R P
Sbjct: 272 TGQNGRMP 279


>ref|XP_003562210.1| PREDICTED: protein OSB1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 308

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -2

Query: 368 SESTWSALFINPSKWLDERPTKKNPRAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENE 189
           +E+ W A F NP  W D R  KKNPR  DFKHK TG  L +D  + P WV+S L+ L++ 
Sbjct: 222 TEALWQAFFANPLDWWDNRQNKKNPRYPDFKHKSTGEALWVDGRNNPNWVISQLAVLDSR 281

Query: 188 AFSHLSTSDRRP-EFLFVD 135
             S L   +R+P  F++ D
Sbjct: 282 MGS-LQDRERKPVSFMYAD 299


>ref|XP_006361790.1| PREDICTED: protein OSB2, chloroplastic-like [Solanum tuberosum]
          Length = 387

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 43/95 (45%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
 Frame = -2

Query: 455 LWIENDSTPTWVSKMLIEL------PNCKAAPADISESTWSALFINPSKWLDERPTKKNP 294
           LWIEN  TP WV + L  L      P  K+   D+   +W  L  NP KW D R +K N 
Sbjct: 292 LWIEN--TPRWVLEGLEGLEFDAYAPKSKSIGKDVD--SWKDLLENPDKWWDNRASKLNQ 347

Query: 293 RAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENE 189
           +A DFKHK TGIGL +   S+P WVLS L  L ++
Sbjct: 348 KAPDFKHKNTGIGLWVG--SSPDWVLSQLPPLRDQ 380


>gb|AAX34397.1| mitochondrial SBP40 [Solanum tuberosum]
          Length = 387

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 43/95 (45%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
 Frame = -2

Query: 455 LWIENDSTPTWVSKMLIEL------PNCKAAPADISESTWSALFINPSKWLDERPTKKNP 294
           LWIEN  TP WV + L  L      P  K+   D+   +W  L  NP KW D R +K N 
Sbjct: 292 LWIEN--TPRWVLEGLEGLEFDAYAPKSKSIGKDVD--SWKDLLENPDKWWDNRASKLNQ 347

Query: 293 RAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENE 189
           +A DFKHK TGIGL +   S+P WVLS L  L ++
Sbjct: 348 KAPDFKHKNTGIGLWVG--SSPDWVLSQLPPLRDQ 380


>ref|NP_001148836.1| single-strand binding protein [Zea mays]
           gi|195622496|gb|ACG33078.1| single-strand binding
           protein [Zea mays]
          Length = 300

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -2

Query: 368 SESTWSALFINPSKWLDERPTKKNPRAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENE 189
           +E  W   F NP  W D R  KKNPR  DFKHK+TG  L +D  + P WV+S L+ L++ 
Sbjct: 214 TEELWQVFFANPLDWWDNRTNKKNPRYPDFKHKQTGEALWVDGRNNPNWVISQLAVLDSR 273

Query: 188 AFSHLSTSDRRP-EFLFVD 135
             S L  ++R+P  +++ D
Sbjct: 274 -MSSLQDNERKPVSYMYAD 291


>gb|ACF87480.1| unknown [Zea mays] gi|413933637|gb|AFW68188.1| single-strand
           binding protein [Zea mays]
          Length = 300

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -2

Query: 368 SESTWSALFINPSKWLDERPTKKNPRAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENE 189
           +E  W   F NP  W D R  KKNPR  DFKHK+TG  L +D  + P WV+S L+ L++ 
Sbjct: 214 TEELWQVFFANPLDWWDNRTNKKNPRYPDFKHKQTGEALWVDGRNNPNWVISQLAVLDSR 273

Query: 188 AFSHLSTSDRRP-EFLFVD 135
             S L  ++R+P  +++ D
Sbjct: 274 -MSSLQDNERKPVSYMYAD 291


>ref|XP_004982374.1| PREDICTED: protein OSB2, chloroplastic-like [Setaria italica]
          Length = 300

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -2

Query: 368 SESTWSALFINPSKWLDERPTKKNPRAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENE 189
           +E  W A F NP  W D R  KKNPR  DFKHK TG  L +D  + P WV+S L+ L++ 
Sbjct: 214 TEELWQAFFANPLDWWDNRTNKKNPRYPDFKHKHTGEALWVDGRNNPNWVISQLAVLDSR 273

Query: 188 AFSHLSTSDRRP-EFLFVD 135
             S L  ++R+P  +++ D
Sbjct: 274 MGS-LQDNERKPVSYMYAD 291


>ref|XP_002464207.1| hypothetical protein SORBIDRAFT_01g014110 [Sorghum bicolor]
           gi|241918061|gb|EER91205.1| hypothetical protein
           SORBIDRAFT_01g014110 [Sorghum bicolor]
          Length = 301

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = -2

Query: 368 SESTWSALFINPSKWLDERPTKKNPRAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENE 189
           +E  W A F NP  W D R  KKNPR  DFKHK TG  L +D  + P WV+S L+ L++ 
Sbjct: 215 TEELWQAFFANPLDWWDNRTNKKNPRYPDFKHKHTGEALWVDGRNNPNWVISQLAVLDSR 274

Query: 188 AFSHLSTSDRRP-EFLFVD 135
             S L  + R+P  +++ D
Sbjct: 275 -MSSLQDNGRKPVSYMYAD 292


>gb|ACR37929.1| unknown [Zea mays] gi|414871826|tpg|DAA50383.1| TPA: single-strand
           binding protein [Zea mays]
          Length = 302

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = -2

Query: 368 SESTWSALFINPSKWLDERPTKKNPRAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENE 189
           +E  W A F NP  W D R  KKNPR  DFKHK TG  L +D  + P WV S L+ L++ 
Sbjct: 216 TEELWQAFFANPLDWWDNRTNKKNPRYPDFKHKHTGEALWVDGRNNPNWVTSQLAVLDSR 275

Query: 188 AFSHLSTSDRRP-EFLFVD 135
             S L  ++R+P  +++ D
Sbjct: 276 -MSSLQDNERKPVSYMYAD 293


>ref|XP_006651616.1| PREDICTED: protein OSB1, mitochondrial-like, partial [Oryza
           brachyantha]
          Length = 211

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 32/78 (41%), Positives = 42/78 (53%)
 Frame = -2

Query: 368 SESTWSALFINPSKWLDERPTKKNPRAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENE 189
           +E  W A F NP  W D R  KKNPR  DFKHK TG  L +D  + P WV+S L+ L++ 
Sbjct: 121 TEQLWQAFFANPLDWWDNRTNKKNPRYPDFKHKHTGEALWVDGRNNPNWVISQLAILDSR 180

Query: 188 AFSHLSTSDRRPEFLFVD 135
             S      +   F++ D
Sbjct: 181 MGSRQDGERKPVAFMYAD 198


>ref|XP_003536815.2| PREDICTED: protein OSB2, chloroplastic-like [Glycine max]
          Length = 342

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 32/69 (46%), Positives = 41/69 (59%)
 Frame = -2

Query: 359 TWSALFINPSKWLDERPTKKNPRAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENEAFS 180
           TW+A F NP +W D R  K+NP+A DFKHK+TG  L I+    P WV S L  L++   S
Sbjct: 262 TWNAFFANPGEWWDNRNNKRNPKAPDFKHKDTGEALWIEGRYNPPWVKSQLEILDSRMGS 321

Query: 179 HLSTSDRRP 153
             S + R P
Sbjct: 322 FASQNARMP 330


>gb|ESW16682.1| hypothetical protein PHAVU_007G176800g [Phaseolus vulgaris]
          Length = 276

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 32/68 (47%), Positives = 40/68 (58%)
 Frame = -2

Query: 356 WSALFINPSKWLDERPTKKNPRAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENEAFSH 177
           W A F NP +W D R TK+NP+A DFKHK+TG  L I+   TP WV S L  L+    S+
Sbjct: 197 WQAFFANPGEWWDNRMTKRNPKAPDFKHKDTGEALWIEGRYTPQWVNSQLEILDARMGSN 256

Query: 176 LSTSDRRP 153
              + R P
Sbjct: 257 AGHNARMP 264


>ref|NP_001150313.1| single-strand binding protein [Zea mays]
           gi|195638310|gb|ACG38623.1| single-strand binding
           protein [Zea mays]
          Length = 301

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -2

Query: 368 SESTWSALFINPSKWLDERPTKKNPRAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENE 189
           +E  W ALF NP  W D R T KNPR  DFKHK TG  L +D  + P WV S L+ L++ 
Sbjct: 216 TEELWQALFANPLDWWDNR-TNKNPRYPDFKHKHTGEALWVDGRNNPNWVTSQLAVLDSR 274

Query: 188 AFSHLSTSDRRP-EFLFVD 135
             S L  ++R+P  +++ D
Sbjct: 275 -MSSLQDNERKPVSYMYAD 292


>dbj|BAK00498.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 306

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = -2

Query: 368 SESTWSALFINPSKWLDERPTKKNPRAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENE 189
           +E+ W A F NP  W D R  KKNPR  DFKHK TG  L ++  + P WV+S L+ L++ 
Sbjct: 220 TEALWQAFFANPLDWWDNRKDKKNPRYPDFKHKSTGEALWVEGRNNPNWVVSQLAILDSR 279

Query: 188 AFSHLSTSDRRP-EFLFVD 135
             S L    R+P  +++ D
Sbjct: 280 MGS-LQDKQRKPVSYMYAD 297


>dbj|BAK01550.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 306

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = -2

Query: 368 SESTWSALFINPSKWLDERPTKKNPRAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENE 189
           +E+ W A F NP  W D R  KKNPR  DFKHK TG  L ++  + P WV+S L+ L++ 
Sbjct: 220 TEALWQAFFANPLDWWDNRKDKKNPRYPDFKHKSTGEALWVEGRNNPNWVVSQLAILDSR 279

Query: 188 AFSHLSTSDRRP-EFLFVD 135
             S L    R+P  +++ D
Sbjct: 280 MGS-LQDKQRKPVSYMYAD 297


>ref|XP_004246681.1| PREDICTED: protein OSB2, chloroplastic-like [Solanum lycopersicum]
          Length = 387

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
 Frame = -2

Query: 455 LWIENDSTPTWVSKML--IELPNCKAAPADISEST--WSALFINPSKWLDERPTKKNPRA 288
           LWIEN   P WV + L  +E       P  I +    W  L  NP KW D R +K N +A
Sbjct: 292 LWIEN--APRWVLEGLEGLEFDAYAPKPKGIGKDVDCWKDLLENPDKWWDNRVSKLNQKA 349

Query: 287 ADFKHKETGIGLCIDSMSTPAWVLSSLSNLENE 189
            DFKHK TGIGL +   S+P WVLS L  L ++
Sbjct: 350 PDFKHKNTGIGLWVG--SSPDWVLSRLPPLRDQ 380


>ref|XP_003518896.1| PREDICTED: protein OSB2, chloroplastic-like [Glycine max]
          Length = 284

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 30/69 (43%), Positives = 41/69 (59%)
 Frame = -2

Query: 359 TWSALFINPSKWLDERPTKKNPRAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENEAFS 180
           +W+A F NP +W D R  K+NP+A DFKHK+TG  L I+   +P WV S L  L++   S
Sbjct: 204 SWNAFFANPGEWWDNRNNKRNPKAPDFKHKDTGEALWIEGRYSPPWVKSQLEILDSRMGS 263

Query: 179 HLSTSDRRP 153
               + R P
Sbjct: 264 FAGQNARMP 272


>ref|XP_002529526.1| hypothetical protein RCOM_1716690 [Ricinus communis]
           gi|223531010|gb|EEF32864.1| hypothetical protein
           RCOM_1716690 [Ricinus communis]
          Length = 281

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
 Frame = -2

Query: 455 LWIENDSTPTWVSKML------IELPNCKAAPADISESTWSALFINPSKWLDERPTKKNP 294
           LW+  +  P W+   L      +++P  K       ++ W+ L  +P+KW D R  KKN 
Sbjct: 184 LWL--NKAPRWILSELEKLEFDVQIPKSKQVKQHKGDANWTDLVGHPNKWWDNRLNKKNE 241

Query: 293 RAADFKHKETGIGLCIDSMSTPAWVLSSLSNLENE 189
           R  DFKHKETG+GL +   ++P WVLS L  ++ +
Sbjct: 242 RYPDFKHKETGVGLWLS--NSPTWVLSELPPMKGD 274


Top