BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00029188
         (697 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006366638.1| PREDICTED: putative pentatricopeptide repeat...   144   3e-32
ref|XP_006828847.1| hypothetical protein AMTR_s00001p00155170 [A...   142   1e-31
ref|XP_006469116.1| PREDICTED: uncharacterized protein LOC102612...   141   2e-31
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi...   138   1e-30
ref|XP_006446876.1| hypothetical protein CICLE_v10017898mg [Citr...   137   2e-30
ref|XP_004234215.1| PREDICTED: putative pentatricopeptide repeat...   137   3e-30
emb|CBI36131.3| unnamed protein product [Vitis vinifera]              135   2e-29
ref|XP_006361605.1| PREDICTED: pentatricopeptide repeat-containi...   134   2e-29
ref|XP_006465624.1| PREDICTED: pentatricopeptide repeat-containi...   134   3e-29
ref|XP_004509407.1| PREDICTED: pentatricopeptide repeat-containi...   134   3e-29
ref|XP_006292572.1| hypothetical protein CARUB_v10018807mg [Caps...   134   4e-29
ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi...   134   4e-29
ref|XP_004307818.1| PREDICTED: pentatricopeptide repeat-containi...   133   5e-29
ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containi...   133   5e-29
ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   131   2e-28
ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containi...   131   2e-28
gb|EMJ14405.1| hypothetical protein PRUPE_ppb012387mg [Prunus pe...   130   5e-28
gb|EMJ20518.1| hypothetical protein PRUPE_ppa019039mg [Prunus pe...   129   1e-27
ref|XP_002512799.1| pentatricopeptide repeat-containing protein,...   129   1e-27
ref|XP_004235427.1| PREDICTED: pentatricopeptide repeat-containi...   128   1e-27

>ref|XP_006366638.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Solanum tuberosum]
          Length = 677

 Score =  144 bits (363), Expect = 3e-32
 Identities = 80/178 (44%), Positives = 107/178 (60%), Gaps = 5/178 (2%)
 Frame = -3

Query: 533 DIDTLQQIHGTIIID-GSHNNVIMVTKLLALYTSLGYIENAYQLFQSIPFNSRDVYLYNV 357
           DI TL+++H  II D G  NN  +  KL+  Y + G      QLF  IP   R+  +YNV
Sbjct: 49  DIKTLKKLHSKIIFDPGLCNNTSLAIKLMRAYAACGQPNVTRQLFDKIP--ERNAAVYNV 106

Query: 356 MIKSCIVNGSYEKCINLYFSMR----NPDNYSVTLALKACTAIQDVRLGKMVHNHVVKFG 189
           MI+S + N  Y+  I +Y  M     NPDNY+    LKAC    ++R+G  +H  V K G
Sbjct: 107 MIRSYVNNKYYKDAIFIYIDMCKRDVNPDNYTFPCVLKACFGSDNLRVGMQIHCAVGKRG 166

Query: 188 LESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQNGQAYDALKV 15
           L+SD ++ NCL+AMY  CG    ARQ+  +MP RDV+SWNS+VV Y QNG+  DAL+V
Sbjct: 167 LDSDLFIGNCLVAMYGKCGCLVEARQVHSEMPKRDVVSWNSMVVGYAQNGRFDDALEV 224



 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
 Frame = -3

Query: 566 ITWSSYLLGCKDI----DTLQQIHGTIIIDGSHNNVIMVTKLLALY-TSLGYIENAYQLF 402
           ++W+S ++G        D L+      ++    N   M + L A+  TS+  +     +F
Sbjct: 203 VSWNSMVVGYAQNGRFDDALEVCKEMNVLGYKPNAGTMASLLPAVSNTSIENVLFVKDIF 262

Query: 401 QSIPFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----PDNYSVTLALKACTAIQD 234
            S+    +D+  +NVMI   + N    + + LY  M      PD  +    L AC  +  
Sbjct: 263 MSLDI--KDLVAWNVMIAVYVKNYMPNEAVELYLQMETCGIEPDAITFASILPACGDLSA 320

Query: 233 VRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVA 54
           V LG+ +H  +   GL  +  + N L+ MYA CG    AR++F+ M  RDV+SW SL+ A
Sbjct: 321 VSLGRRIHEFIETKGLRPNLSLENALVDMYARCGCLTEARKMFEGMKFRDVVSWTSLISA 380

Query: 53  YLQNGQAYDALKVFDNV 3
           Y ++GQ  D + +F  +
Sbjct: 381 YGKSGQGRDGVVLFSQM 397


>ref|XP_006828847.1| hypothetical protein AMTR_s00001p00155170 [Amborella trichopoda]
           gi|548833826|gb|ERM96263.1| hypothetical protein
           AMTR_s00001p00155170 [Amborella trichopoda]
          Length = 454

 Score =  142 bits (357), Expect = 1e-31
 Identities = 75/200 (37%), Positives = 116/200 (58%), Gaps = 5/200 (2%)
 Frame = -3

Query: 596 KANQNSTEKFITWSSYLLGCKDIDTLQQIHGTIIIDGSHNNVIMVTKLLALYTSL-GYIE 420
           + N +S      +S  L  C+DI++L+ +H  ++  G  +N+ +  KL+ +Y    G +E
Sbjct: 27  RGNGSSFLDSYEYSQLLQSCRDIESLKAVHAQVVTAGYQSNMYLAAKLIEIYRDFSGSME 86

Query: 419 NAYQLFQSIPFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMR----NPDNYSVTLALKA 252
           +  ++F +     RD  LYNV+I+    +GSY + I  Y  M+     P+++S    LKA
Sbjct: 87  DGRKVFNNT--TERDSQLYNVLIRGYTTHGSYMEAIRAYDEMQMQGLKPNHFSFPFVLKA 144

Query: 251 CTAIQDVRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISW 72
           C+A+ D+  GK +H   +  G+   TYV N LIAMYA CG    ARQ+FD+MP RDVISW
Sbjct: 145 CSAMGDLEKGKEIHRDSMMAGMNGHTYVCNGLIAMYARCGDLTNARQVFDEMPERDVISW 204

Query: 71  NSLVVAYLQNGQAYDALKVF 12
           NS++  Y QN    +AL++F
Sbjct: 205 NSMIAGYCQNDHPKEALELF 224



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 5/179 (2%)
 Frame = -3

Query: 533 DIDTLQQIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSIPFNSRDVYLYNVM 354
           D++  ++IH   ++ G + +  +   L+A+Y   G + NA Q+F  +P   RDV  +N M
Sbjct: 150 DLEKGKEIHRDSMMAGMNGHTYVCNGLIAMYARCGDLTNARQVFDEMP--ERDVISWNSM 207

Query: 353 IKSCIVNGSYEKCINLYFSM-----RNPDNYSVTLALKACTAIQDVRLGKMVHNHVVKFG 189
           I     N   ++ + L+  M        D  ++   L + + +  +  G+  H + +K G
Sbjct: 208 IAGYCQNDHPKEALELFHGMLLGFREGLDGVTLVAILPSLSQLSALGHGRWAHCYAIKNG 267

Query: 188 LESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQNGQAYDALKVF 12
              D  +   L+ MYA CG   VAR +FD+M  R+V SWN+L+  Y   G A DAL  F
Sbjct: 268 FVVDVVLGTALVNMYAKCGRLSVARLVFDRMAQRNVFSWNALIGGYGVYGLASDALGTF 326


>ref|XP_006469116.1| PREDICTED: uncharacterized protein LOC102612526 [Citrus sinensis]
          Length = 1508

 Score =  141 bits (355), Expect = 2e-31
 Identities = 79/200 (39%), Positives = 119/200 (59%), Gaps = 8/200 (4%)
 Frame = -3

Query: 587  QNSTEKFI--TWSSYLLGCKDIDTLQQIHGTIIIDG--SHNNVIMVTKLLALYTSLGYIE 420
            Q  TE F   T  S +  C+ + +L+ +H   +      H+++ +VT L++ Y SLG I 
Sbjct: 493  QQQTEFFDPETCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLGSIS 552

Query: 419  NAYQLFQSIPFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMR----NPDNYSVTLALKA 252
            +A+ LF S+  +S D++L+NVMI++ + N  +++ + LY  MR    NPDN++    LKA
Sbjct: 553  HAFSLFSSVS-DSCDIFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDNFTFPFVLKA 611

Query: 251  CTAIQDVRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISW 72
            C  ++D+  G  VH   V  G  SD +V N LIAMY  CG   V RQLFD+MP R+V++W
Sbjct: 612  CGYLRDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTW 671

Query: 71   NSLVVAYLQNGQAYDALKVF 12
            +SL  AY QNG   + L +F
Sbjct: 672  SSLTGAYAQNGCYEEGLLLF 691



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 3/178 (1%)
 Frame = -3

Query: 536  KDIDTLQQIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSIPFNSRDVYLYNV 357
            +DI+   ++H   +  G  ++V +   L+A+Y   G ++   QLF  +P   R+V  ++ 
Sbjct: 616  RDIEFGVKVHKDAVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMP--ERNVVTWSS 673

Query: 356  MIKSCIVNGSYEKCINLYFSMRNPD---NYSVTLALKACTAIQDVRLGKMVHNHVVKFGL 186
            +  +   NG YE+ + L+  M +     N  V L + AC  I+ V   + V   VV  GL
Sbjct: 674  LTGAYAQNGCYEEGLLLFKRMMDEGIRPNRVVILNVMAC--IRKVSEAEDVCRVVVDNGL 731

Query: 185  ESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQNGQAYDALKVF 12
            + D  + N  + M+A CG   +AR+ FD +  +D++SW S++ AY Q     +AL+VF
Sbjct: 732  DLDQSLQNAAMVMFARCGRMDMARKFFDGISNKDLVSWTSMIEAYAQADLPLEALEVF 789



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 38/168 (22%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
 Frame = -3

Query: 494  IDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSIPFNSRDVYLYNVMIKSCIVNGSYEKC 315
            +D S  N  MV     ++   G ++ A + F  I  +++D+  +  MI++        + 
Sbjct: 733  LDQSLQNAAMV-----MFARCGRMDMARKFFDGI--SNKDLVSWTSMIEAYAQADLPLEA 785

Query: 314  INLYFSMRN----PDNYSVTLALKACTAIQDVRLGKMVHNHVVKFGLESDTYVVNCLIAM 147
            + ++  M      PD+ +    ++AC+++   +  + VH  ++   L +   +   ++ +
Sbjct: 786  LEVFRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDL 845

Query: 146  YAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQNGQAYDALKVFDNV 3
            Y  CG    AR++FD+M  ++VISW++++  Y  +G   +AL +FD +
Sbjct: 846  YVKCGSLMYARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM 893


>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449522468|ref|XP_004168248.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  138 bits (348), Expect = 1e-30
 Identities = 77/187 (41%), Positives = 112/187 (59%), Gaps = 7/187 (3%)
 Frame = -3

Query: 560 WSSYLLGC---KDIDTLQQIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSIP 390
           ++S L  C   K I+  +Q+H  I   G   N ++ TKL+ LY     + NA+ LF  I 
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRI- 62

Query: 389 FNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----PDNYSVTLALKACTAIQDVRLG 222
            + R+++L+NVMI+    NG YE  I+LY+ MR+    PD ++    LKAC+A+  +  G
Sbjct: 63  -SKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEG 121

Query: 221 KMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQN 42
           K +H  V++ GLESD +V   LI MYA CG    ARQ+FDK+  RDV+ WNS++  Y QN
Sbjct: 122 KKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQN 181

Query: 41  GQAYDAL 21
           GQ  ++L
Sbjct: 182 GQPDESL 188



 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
 Frame = -3

Query: 575 EKFITWSSYLLGCKDIDTLQQ---IHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQL 405
           +KF T+   L  C  +  +++   IH  +I  G  ++V +   L+ +Y   G +E+A Q+
Sbjct: 101 DKF-TFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQV 159

Query: 404 FQSIPFNSRDVYLYNVMIKSCIVNGSYEK----CINLYFSMRNPDNYSVTLALKACTAIQ 237
           F  I  + RDV  +N M+ +   NG  ++    C  + F+   P   +  +++ A     
Sbjct: 160 FDKI--DERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNG 217

Query: 236 DVRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVV 57
            +  GK +H +  + G ES+  V   L+ MYA  G   VAR LF+ +  + V+SWN+++ 
Sbjct: 218 LLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMIT 277

Query: 56  AYLQNGQAYDALKVF 12
            Y  +G A +AL +F
Sbjct: 278 GYAMHGHANEALDLF 292


>ref|XP_006446876.1| hypothetical protein CICLE_v10017898mg [Citrus clementina]
           gi|557549487|gb|ESR60116.1| hypothetical protein
           CICLE_v10017898mg [Citrus clementina]
          Length = 714

 Score =  137 bits (346), Expect = 2e-30
 Identities = 79/203 (38%), Positives = 119/203 (58%), Gaps = 8/203 (3%)
 Frame = -3

Query: 587 QNSTEKFI--TWSSYLLGCKDIDTLQQIHGTIIIDG--SHNNVIMVTKLLALYTSLGYIE 420
           Q  TE F   T  S +  C+ + +L+ +H   +      H+++ +VT L++ Y SL  I 
Sbjct: 35  QQQTEFFDPETCISSIKQCQTLQSLKTLHAFTLRSRFYHHHDLFLVTNLVSQYASLCSIS 94

Query: 419 NAYQLFQSIPFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMR----NPDNYSVTLALKA 252
           +A+ LF S+  +S D++L+NVMI++ + N  +++ + LY  MR    NPD ++    LKA
Sbjct: 95  HAFSLFSSVS-DSCDLFLWNVMIRAFVDNRQFDRSLQLYAQMRELDINPDKFTFPFVLKA 153

Query: 251 CTAIQDVRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISW 72
           C  ++D+  G  VH  VV  G  SD +V N LIAMY  CG   V RQLFD+MP R+V++W
Sbjct: 154 CGYLRDIEFGVKVHKDVVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMPERNVVTW 213

Query: 71  NSLVVAYLQNGQAYDALKVFDNV 3
           +SL  AY QNG   + L +F  V
Sbjct: 214 SSLTGAYAQNGGYEEGLLLFKRV 236



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 51/178 (28%), Positives = 93/178 (52%), Gaps = 3/178 (1%)
 Frame = -3

Query: 536 KDIDTLQQIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSIPFNSRDVYLYNV 357
           +DI+   ++H  ++  G  ++V +   L+A+Y   G ++   QLF  +P   R+V  ++ 
Sbjct: 158 RDIEFGVKVHKDVVDSGYWSDVFVGNSLIAMYGKCGRVDVCRQLFDEMP--ERNVVTWSS 215

Query: 356 MIKSCIVNGSYEKCINLYFSMRNPD---NYSVTLALKACTAIQDVRLGKMVHNHVVKFGL 186
           +  +   NG YE+ + L+  + +     N  V L + AC  ++ V     V   VV  GL
Sbjct: 216 LTGAYAQNGGYEEGLLLFKRVMDEGIRPNRVVILNVMAC--VRKVSEADDVCRVVVDNGL 273

Query: 185 ESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQNGQAYDALKVF 12
           + D  + N  + MYA CG   +AR+ F+ +  +D++SW S++ AY Q     +AL+V+
Sbjct: 274 DLDQSLQNAAMVMYARCGRMDMARRFFEGILNKDLVSWTSMIEAYAQADLPLEALEVY 331



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 40/168 (23%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
 Frame = -3

Query: 494 IDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSIPFNSRDVYLYNVMIKSCIVNGSYEKC 315
           +D S  N  MV     +Y   G ++ A + F+ I   ++D+  +  MI++        + 
Sbjct: 275 LDQSLQNAAMV-----MYARCGRMDMARRFFEGIL--NKDLVSWTSMIEAYAQADLPLEA 327

Query: 314 INLYFSMRN----PDNYSVTLALKACTAIQDVRLGKMVHNHVVKFGLESDTYVVNCLIAM 147
           + +Y  M      PD+ +    ++AC+++   +  + VH  ++   L +   +   ++ +
Sbjct: 328 LEVYRQMILRRVLPDSVTFLGVIRACSSLASFQQARTVHGIIIHCFLGNQLALDTAVVDL 387

Query: 146 YAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQNGQAYDALKVFDNV 3
           Y  CG    AR++FD+M  ++VISW++++  Y  +G   +AL +FD +
Sbjct: 388 YVKCGSLMYARKVFDRMKQKNVISWSTMISGYGMHGHGREALFLFDQM 435


>ref|XP_004234215.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Solanum lycopersicum]
          Length = 695

 Score =  137 bits (345), Expect = 3e-30
 Identities = 86/215 (40%), Positives = 121/215 (56%), Gaps = 5/215 (2%)
 Frame = -3

Query: 644 TKNPYSLLTPRKNSNPKANQNSTEKFITWSSYLLGCKDIDTLQQIHGTIIID-GSHNNVI 468
           T N Y + T RK   P+ + +     ++ S  L    DI T++++H  II D G  NN  
Sbjct: 34  TANSY-IQTVRK---PQLSYSLNVDEVSSSRILDRLPDIKTVKKLHAKIIFDPGLCNNTS 89

Query: 467 MVTKLLALYTSLGYIENAYQLFQSIPFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMR- 291
           +  KL+  Y + G      QLF  IP   R+  +YNVMI+S + N  Y+  I +Y  M  
Sbjct: 90  LAIKLMRAYAACGQPTVTRQLFDKIP--ERNGAVYNVMIRSYVNNKYYKDAIFIYIDMCK 147

Query: 290 ---NPDNYSVTLALKACTAIQDVRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGV 120
              +PDNY+    LKAC    ++R+G  +H  V K GL+SD ++ NCL+AMY  C     
Sbjct: 148 RHVSPDNYTFPCVLKACFGSDNLRVGLQIHCAVGKRGLDSDLFIGNCLVAMYGKCRCLVE 207

Query: 119 ARQLFDKMPTRDVISWNSLVVAYLQNGQAYDALKV 15
           ARQ+  +MP RDV+SWNS+VV Y QNG+  DAL+V
Sbjct: 208 ARQVLSEMPKRDVVSWNSMVVGYAQNGRFDDALEV 242



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
 Frame = -3

Query: 566 ITWSSYLLGCKDI----DTLQQIHGTIIIDGSHNNVIMVTKLLALY-TSLGYIENAYQLF 402
           ++W+S ++G        D L+      ++    N   M + L AL  TS+  +     +F
Sbjct: 221 VSWNSMVVGYAQNGRFDDALEVCKEMNVLGYKPNAGTMASLLPALSNTSIENVLFVKDIF 280

Query: 401 QSIPFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----PDNYSVTLALKACTAIQD 234
            S+  + +D+  +NVMI   + N    + + LYF M      PD  ++   L AC  +  
Sbjct: 281 MSL--DKKDLVPWNVMIAVHVKNYMPNEAVELYFQMETSGIEPDAITLASILPACGDLSA 338

Query: 233 VRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVA 54
           V LG+ +H  +   GL  +  + N L+ MYA CG    AR++F+ M  RD++SW SL+ A
Sbjct: 339 VSLGRRIHEFIETKGLRPNLSLENALVDMYARCGCLTEARKMFEDMKFRDIVSWTSLISA 398

Query: 53  YLQNGQAYDALKVFDNV 3
           Y ++GQ  D + +F  +
Sbjct: 399 YGKSGQGRDGVALFSQM 415


>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  135 bits (339), Expect = 2e-29
 Identities = 76/212 (35%), Positives = 118/212 (55%), Gaps = 11/212 (5%)
 Frame = -3

Query: 605 SNPKANQNS-TEKFITWSSYLLGC---KDIDTLQQIHGTIIIDGSHNNVIMVTKLLALYT 438
           SNP A     T  +  ++S L  C   K I   +Q+H  + + G   + ++ TKL+ LY 
Sbjct: 62  SNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYC 121

Query: 437 SLGYIENAYQLFQSIPFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----PDNYSV 270
               + +A  LF  IP    +++L+NV+I+    NG YE  + LY+ M +    PDN++ 
Sbjct: 122 VCDSLSSARLLFDRIP--KHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTF 179

Query: 269 TLALKACTAIQDVRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPT 90
              LKAC A+  +  G+ +H HVV+ G E D +V   LI MYA CG  G AR++FDK+  
Sbjct: 180 PFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILV 239

Query: 89  RD---VISWNSLVVAYLQNGQAYDALKVFDNV 3
           RD   V+SWN+++  Y  +G A +AL +F+ +
Sbjct: 240 RDAVLVVSWNAMITGYAMHGHATEALDLFEEM 271


>ref|XP_006361605.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Solanum tuberosum]
          Length = 602

 Score =  134 bits (338), Expect = 2e-29
 Identities = 69/196 (35%), Positives = 114/196 (58%), Gaps = 4/196 (2%)
 Frame = -3

Query: 596 KANQNSTEKFITWSSYLLGCKDIDTLQQIHGTIIIDGSHNNVIMVTKLLALYTSLGYIEN 417
           K +QN T+ + +     +G K ++  +Q+H  + + G   N+ + TKL+ LY+    + N
Sbjct: 23  KYSQNPTQHYASLLQSCIGRKAVEPGKQLHAHLCLTGLGYNINLATKLVNLYSVCDKLPN 82

Query: 416 AYQLFQSIPFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----PDNYSVTLALKAC 249
           A+ LF  IP    +++L+NV+I+    NG YE  I+LY+ M +    PDN++    LKAC
Sbjct: 83  AHHLFDRIP--KGNIFLWNVLIRGYAWNGPYEAAISLYYQMIDYGHVPDNFTFPFVLKAC 140

Query: 248 TAIQDVRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWN 69
           +A+  + +GK +H +  +   + D +V   LI MYA CG  G +R++F+ +  RDV+ WN
Sbjct: 141 SALSAIEVGKDIHEYAKRTKWDKDVFVGAALIDMYAKCGCVGRSREVFEDVVERDVVVWN 200

Query: 68  SLVVAYLQNGQAYDAL 21
           S++ AY QNG   D L
Sbjct: 201 SMLAAYSQNGHPEDCL 216



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 4/162 (2%)
 Frame = -3

Query: 476 NVIMVTKLLALYTSLGYIENAYQLFQSIPFNSRDVYLYNVMIKSCIVNGSYEKCINLYFS 297
           +V +   L+ +Y   G +  + ++F+ +    RDV ++N M+ +   NG  E C++L   
Sbjct: 164 DVFVGAALIDMYAKCGCVGRSREVFEDVV--ERDVVVWNSMLAAYSQNGHPEDCLDLCGE 221

Query: 296 MR----NPDNYSVTLALKACTAIQDVRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGF 129
           M      P   ++  A+ A   +  +R G  +H +  + G +S   V   L+ MYA  G 
Sbjct: 222 MACGGVRPTEATLVTAISASADVAALRQGMELHGYSWRQGFDSLDKVKTALVDMYAKSGS 281

Query: 128 PGVARQLFDKMPTRDVISWNSLVVAYLQNGQAYDALKVFDNV 3
             VAR LF+ +  + V+SWN+++  Y  +G A  AL +F+ +
Sbjct: 282 VKVARILFEGLQEKRVVSWNAMITGYAMHGHANAALGLFNEM 323


>ref|XP_006465624.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Citrus sinensis]
          Length = 644

 Score =  134 bits (337), Expect = 3e-29
 Identities = 82/225 (36%), Positives = 129/225 (57%), Gaps = 12/225 (5%)
 Frame = -3

Query: 653 QTLTKNPYS-----LLTPRKNSNPKANQNSTEKFITWSSYLLGC---KDIDTLQQIHGTI 498
           Q + +NP +     LL+  K SN   +Q  +     + S L  C   K +   +QIH  I
Sbjct: 42  QAIQQNPNTDPRNTLLSSSKVSNIPTHQIQSY----YGSLLQSCIAQKAVSPGKQIHALI 97

Query: 497 IIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSIPFNSRDVYLYNVMIKSCIVNGSYEK 318
              G   + ++ TKL+ LY++   + NA+QLF  IP   R+++L+NV+I++   NG YE 
Sbjct: 98  SQMGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEV 155

Query: 317 CINLYFSMRN----PDNYSVTLALKACTAIQDVRLGKMVHNHVVKFGLESDTYVVNCLIA 150
            I LY+ +      PDN++   ALKAC+A+  +  G+ +H  V++   E+D +V   LI 
Sbjct: 156 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 215

Query: 149 MYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQNGQAYDALKV 15
           MYA C     ARQ+FDK+  RDV+ WNS++ AY QNGQA +++++
Sbjct: 216 MYAKCSCVVNARQVFDKILERDVVVWNSMIAAYGQNGQADESIEL 260



 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 7/194 (3%)
 Frame = -3

Query: 563 TWSSYLLGCKDIDTLQQ---IHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSI 393
           T+   L  C  +  +++   IH  +I +    +V +   L+ +Y     + NA Q+F  I
Sbjct: 174 TFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI 233

Query: 392 PFNSRDVYLYNVMIKSCIVNG----SYEKCINLYFSMRNPDNYSVTLALKACTAIQDVRL 225
               RDV ++N MI +   NG    S E C  +  +   P   ++   + A T I  +  
Sbjct: 234 L--ERDVVVWNSMIAAYGQNGQADESIELCREMILTGLKPSEATLVTVISASTDIAALPQ 291

Query: 224 GKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQ 45
           G+ +H    +   E +  V   L+ MYA CG   VAR LF+++  + V+SWN+++  Y  
Sbjct: 292 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLGEKRVVSWNAMITGYAM 351

Query: 44  NGQAYDALKVFDNV 3
           +G +  AL +F+ +
Sbjct: 352 HGHSTKALDLFEKM 365


>ref|XP_004509407.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cicer arietinum]
          Length = 513

 Score =  134 bits (337), Expect = 3e-29
 Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 8/187 (4%)
 Frame = -3

Query: 539 CKDIDTLQQIHGTIIIDGSHNNVIMVTKLLALYTSLG----YIENAYQLFQSIPFNSRDV 372
           CK +D++++ H  +II G   +  +  KL+  Y  +G    Y+++A  +F  +  + RDV
Sbjct: 31  CKTVDSIKKTHAQVIIGGHEQDPFIAAKLIDKYAQIGNGGSYVKHARNVFDQL--SHRDV 88

Query: 371 YLYNVMIKSCIVNGSYEKCINLYFSMR----NPDNYSVTLALKACTAIQDVRLGKMVHNH 204
           + +NV+IK     G + + +N+Y  MR    N + Y+    LKAC A +    G+++H H
Sbjct: 89  FCWNVVIKGYANMGPFAEALNVYDEMRLSGINLNRYTYPFVLKACGAERAFLKGRIIHGH 148

Query: 203 VVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQNGQAYDA 24
            VK GL+ D +V N  +A YA C    V+R+LFD+MP RD++SWNS++  Y+ NG   DA
Sbjct: 149 AVKCGLDFDLFVCNAFVAFYAKCQEVEVSRKLFDEMPERDIVSWNSMISGYIANGYVDDA 208

Query: 23  LKVFDNV 3
           + +F N+
Sbjct: 209 VIIFFNM 215



 Score = 92.8 bits (229), Expect = 9e-17
 Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 6/173 (3%)
 Frame = -3

Query: 512 IHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSIPFNSRDVYLYNVMIKSCIVN 333
           IHG  +  G   ++ +    +A Y     +E + +LF  +P   RD+  +N MI   I N
Sbjct: 145 IHGHAVKCGLDFDLFVCNAFVAFYAKCQEVEVSRKLFDEMP--ERDIVSWNSMISGYIAN 202

Query: 332 GSYEKCINLYFSMRN------PDNYSVTLALKACTAIQDVRLGKMVHNHVVKFGLESDTY 171
           G  +  + ++F+M        PDN ++   L A +   D+  G  +H ++VK G++ D  
Sbjct: 203 GYVDDAVIIFFNMLRDDDIGFPDNATLVTVLPAFSEKADIHAGYWIHCYIVKTGMKLDPA 262

Query: 170 VVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQNGQAYDALKVF 12
           V   LI +Y++CG+  +AR +FD++  R+VI WN+++  Y  +G   +AL +F
Sbjct: 263 VGCGLITLYSNCGYISMARAVFDQISDRNVIVWNAIIRCYGMHGFPQEALGMF 315


>ref|XP_006292572.1| hypothetical protein CARUB_v10018807mg [Capsella rubella]
           gi|482561279|gb|EOA25470.1| hypothetical protein
           CARUB_v10018807mg [Capsella rubella]
          Length = 684

 Score =  134 bits (336), Expect = 4e-29
 Identities = 72/177 (40%), Positives = 107/177 (60%), Gaps = 4/177 (2%)
 Frame = -3

Query: 533 DIDTLQQIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSIPFNSRDVYLYNVM 354
           DI TL+ +H  I++DG   N  +  KL+  Y SL  + +A ++F+ IP   R+V + NVM
Sbjct: 54  DIRTLRTVHSRIVLDGLRCNSSLGVKLMRAYASLKDVASARKVFEDIP--ERNVIIINVM 111

Query: 353 IKSCIVNGSYEKCINLYFSMRN----PDNYSVTLALKACTAIQDVRLGKMVHNHVVKFGL 186
           I+S + NG Y + I ++ +M      PD+Y+    LKAC+   ++ +GK +H    + GL
Sbjct: 112 IRSYVNNGFYREGIQVFGTMCGCNVRPDHYTFPCVLKACSCSGNIVIGKKIHGSATRVGL 171

Query: 185 ESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQNGQAYDALKV 15
            S  +V N L++MY  CGF   AR + D+M  RDV+SWNSLVV Y QN +  DAL+V
Sbjct: 172 SSTLFVGNGLVSMYGKCGFLAEARLVLDEMARRDVVSWNSLVVGYAQNQRFDDALEV 228



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 9/197 (4%)
 Frame = -3

Query: 566 ITWSSYLLGCKDI----DTLQQIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENA-YQLF 402
           ++W+S ++G        D L+       +  SH+   M + L A+  +    EN  Y   
Sbjct: 207 VSWNSLVVGYAQNQRFDDALEVCREMESVKVSHDAGTMASLLPAVSNTT--TENVMYVKD 264

Query: 401 QSIPFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMR----NPDNYSVTLALKACTAIQD 234
                  + +  +NVMI   + N    + + LY  M      PD  S+T  L AC     
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324

Query: 233 VRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVA 54
           + LGK +H ++ +  L  +  + N LI MYA CG    AR +F+ M +RDV+SW +++ A
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISA 384

Query: 53  YLQNGQAYDALKVFDNV 3
           Y  +G+  DA+ +F  +
Sbjct: 385 YGFSGRGSDAVALFSKM 401


>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  134 bits (336), Expect = 4e-29
 Identities = 74/197 (37%), Positives = 110/197 (55%), Gaps = 8/197 (4%)
 Frame = -3

Query: 605 SNPKANQNS-TEKFITWSSYLLGC---KDIDTLQQIHGTIIIDGSHNNVIMVTKLLALYT 438
           SNP A     T  +  ++S L  C   K I   +Q+H  + + G   + ++ TKL+ LY 
Sbjct: 62  SNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYC 121

Query: 437 SLGYIENAYQLFQSIPFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----PDNYSV 270
               + +A  LF  IP    +++L+NV+I+    NG YE  + LY+ M +    PDN++ 
Sbjct: 122 VCDSLSSARLLFDRIP--KHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTF 179

Query: 269 TLALKACTAIQDVRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPT 90
              LKAC A+  +  G+ +H HVV+ G E D +V   LI MYA CG  G AR++FDK+  
Sbjct: 180 PFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILV 239

Query: 89  RDVISWNSLVVAYLQNG 39
           RD + WNS++ AY QNG
Sbjct: 240 RDAVLWNSMLAAYSQNG 256



 Score = 82.8 bits (203), Expect = 9e-14
 Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
 Frame = -3

Query: 563 TWSSYLLGCKDIDTLQ---QIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSI 393
           T+   L  C  +  ++   +IH  ++  G   +V +   L+ +Y   G + +A ++F  I
Sbjct: 178 TFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKI 237

Query: 392 PFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSM----RNPDNYSVTLALKACTAIQDVRL 225
               RD  L+N M+ +   NG  + C++L   M      P   ++  A+ A      +  
Sbjct: 238 LV--RDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQ 295

Query: 224 GKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQ 45
           G+ +H    +   ES   V   L+ MYA CG   VAR LF+++  + V+SWN+++  Y  
Sbjct: 296 GRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAM 355

Query: 44  NGQAYDALKVFDNV 3
           +G A +AL +F+ +
Sbjct: 356 HGHATEALDLFEEM 369


>ref|XP_004307818.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 522

 Score =  133 bits (335), Expect = 5e-29
 Identities = 70/191 (36%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
 Frame = -3

Query: 563 TWSSYLLGCKDIDTLQ---QIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSI 393
           T++S L  C  +D +    ++H  I  +    NV + +KLL LY S G++E A+Q+F  +
Sbjct: 89  TFASLLETCYKLDAMDYCLRVHRLIPRNLLRRNVGLSSKLLRLYASCGFVEEAHQVFDEM 148

Query: 392 PFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----PDNYSVTLALKACTAIQDVRL 225
           P      + +N +I      G YE  + LYF M      PD ++    LKAC  I  V++
Sbjct: 149 PKRDVSAFAWNSLISGYAELGLYEDAMALYFQMEEEGVEPDRFTFPRVLKACGGIGFVQV 208

Query: 224 GKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQ 45
           G+ VH H+V+ G   D +V+N L+ MYA CG  G AR++FDK+ +RD +SWN+++ AY++
Sbjct: 209 GEAVHRHLVRLGFVGDRFVLNALVDMYAKCGDIGKARKVFDKIGSRDKVSWNTMLTAYMR 268

Query: 44  NGQAYDALKVF 12
           +G    AL +F
Sbjct: 269 HGLLLQALDIF 279



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 47/184 (25%), Positives = 95/184 (51%), Gaps = 7/184 (3%)
 Frame = -3

Query: 563 TWSSYLLGCKDIDTLQ---QIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSI 393
           T+   L  C  I  +Q    +H  ++  G   +  ++  L+ +Y   G I  A ++F  I
Sbjct: 192 TFPRVLKACGGIGFVQVGEAVHRHLVRLGFVGDRFVLNALVDMYAKCGDIGKARKVFDKI 251

Query: 392 PFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----PDNYSVTLALKACTAIQDVRL 225
              SRD   +N M+ + + +G   + ++++  M      PD+ +++  L   + +  + L
Sbjct: 252 --GSRDKVSWNTMLTAYMRHGLLLQALDIFHQMVKERFQPDSVAISAIL---SEVPSLEL 306

Query: 224 GKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQ 45
              +H   ++ G+E +   VN LIA Y++ G    AR+LF +MP +DV++WN+++ A+ +
Sbjct: 307 VVQIHGWAIRQGVEWNLSTVNSLIAAYSNHGKLRQARRLFCQMPEKDVVTWNTIISAHSK 366

Query: 44  NGQA 33
           + +A
Sbjct: 367 SREA 370


>ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  133 bits (335), Expect = 5e-29
 Identities = 71/205 (34%), Positives = 119/205 (58%), Gaps = 4/205 (1%)
 Frame = -3

Query: 617 PRKNSNPKANQNSTEKFITWSSYLLGCKDIDTLQQIHGTIIIDGSHNNVIMVTKLLALYT 438
           P  NS+  ++ NS   + +     +  + + T +Q+HG +++ G   + ++ TKL+ LY 
Sbjct: 49  PSSNSHIASSPNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYA 108

Query: 437 SLGYIENAYQLFQSIPFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----PDNYSV 270
           + G + +A +LF  +P   R+V+L+NV+I++   +G +E  I LY  M +    PDN++ 
Sbjct: 109 ACGLVGHARRLFDGMP--KRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTY 166

Query: 269 TLALKACTAIQDVRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPT 90
            LALKAC A+ D+  G+ VH  V+      D +V   L+ MYA CG    AR +FD++  
Sbjct: 167 PLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRV 226

Query: 89  RDVISWNSLVVAYLQNGQAYDALKV 15
           RD + WNS++ AY QNG+  +AL +
Sbjct: 227 RDSVVWNSMIAAYGQNGRPMEALSL 251



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
 Frame = -3

Query: 290 NPDNYS-VTLALKACTAIQDVRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVAR 114
           +P++Y   T  L++C A + +  G+ +H  ++  GL  DT +   L+ +YA CG  G AR
Sbjct: 58  SPNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHAR 117

Query: 113 QLFDKMPTRDVISWNSLVVAYLQNGQAYDALKVF 12
           +LFD MP R+V  WN L+ AY ++G    A++++
Sbjct: 118 RLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLY 151



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 45/183 (24%), Positives = 93/183 (50%), Gaps = 6/183 (3%)
 Frame = -3

Query: 533 DIDTLQQIHGTIIIDGSH--NNVIMVTKLLALYTSLGYIENAYQLFQSIPFNSRDVYLYN 360
           D++T +++H  ++  G+H   ++ +   L+ +Y   G +++A  +F  I    RD  ++N
Sbjct: 178 DLETGREVHERVL--GTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRI--RVRDSVVWN 233

Query: 359 VMIKSCIVNGSYEKCINLYFSMR----NPDNYSVTLALKACTAIQDVRLGKMVHNHVVKF 192
            MI +   NG   + ++L   M      P   ++   + A      +  G+ +H    + 
Sbjct: 234 SMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRR 293

Query: 191 GLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQNGQAYDALKVF 12
           G +    +   L+ MYA  G+  VAR LF+++  R+++SWN+++  Y  +G   +ALK+F
Sbjct: 294 GFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLF 353

Query: 11  DNV 3
           + +
Sbjct: 354 NKM 356


>ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g25270, chloroplastic-like [Cucumis sativus]
          Length = 489

 Score =  131 bits (329), Expect = 2e-28
 Identities = 68/193 (35%), Positives = 111/193 (57%), Gaps = 7/193 (3%)
 Frame = -3

Query: 560 WSSYLLGCKDIDTLQ---QIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSIP 390
           +SS L  C  +  +    +IH  I  +    NV + +KLL LY S GY+E+A+Q+F  + 
Sbjct: 57  FSSLLELCYQLQAIHHGIRIHRLIPTNLLRRNVGISSKLLRLYASFGYMEDAHQVFDEMG 116

Query: 389 FNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----PDNYSVTLALKACTAIQDVRLG 222
             +   + +N +I      G YE  + LYF M      PDN++    LKAC  I  +++G
Sbjct: 117 NRNFSAFAWNSLISGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVLKACGGIGSIQIG 176

Query: 221 KMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQN 42
           + VH HVV+ G   D +V+N L+ MY+ CG    AR++FD++  +D++SWNS++  Y ++
Sbjct: 177 EAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYKDIVSWNSMLTGYTRH 236

Query: 41  GQAYDALKVFDNV 3
           G  ++AL +FD +
Sbjct: 237 GLHFEALDIFDQM 249



 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 49/194 (25%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
 Frame = -3

Query: 563 TWSSYLLGCKDIDTLQ---QIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSI 393
           T+   L  C  I ++Q    +H  ++  G   +V ++  L+ +Y+  G I  A ++F  I
Sbjct: 159 TFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQI 218

Query: 392 PFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSM----RNPDNYSVTLALKACTAIQDVRL 225
            +  +D+  +N M+     +G + + ++++  M      PD+ +++  L   + I  ++ 
Sbjct: 219 EY--KDIVSWNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLL---SNISSMKF 273

Query: 224 GKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQ 45
              +H  V++ G+E +  + N LI MYA CG    A+ LF +MP +D++SWNS++ A+  
Sbjct: 274 KLHIHGWVIRHGVEWNLSIANSLIVMYAKCGKLNRAKWLFQQMPQKDMVSWNSIISAHFN 333

Query: 44  NGQAYDALKVFDNV 3
           + +A    +V +++
Sbjct: 334 SAEALTYFEVMESL 347


>ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Cucumis sativus]
          Length = 489

 Score =  131 bits (329), Expect = 2e-28
 Identities = 68/193 (35%), Positives = 111/193 (57%), Gaps = 7/193 (3%)
 Frame = -3

Query: 560 WSSYLLGCKDIDTLQ---QIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSIP 390
           +SS L  C  +  +    +IH  I  +    NV + +KLL LY S GY+E+A+Q+F  + 
Sbjct: 57  FSSLLELCYQLQAIHHGIRIHRLIPTNLLRRNVGISSKLLRLYASFGYMEDAHQVFDEMG 116

Query: 389 FNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----PDNYSVTLALKACTAIQDVRLG 222
             +   + +N +I      G YE  + LYF M      PDN++    LKAC  I  +++G
Sbjct: 117 NRNFSAFAWNSLISGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVLKACGGIGSIQIG 176

Query: 221 KMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQN 42
           + VH HVV+ G   D +V+N L+ MY+ CG    AR++FD++  +D++SWNS++  Y ++
Sbjct: 177 EAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYKDIVSWNSMLTGYTRH 236

Query: 41  GQAYDALKVFDNV 3
           G  ++AL +FD +
Sbjct: 237 GLHFEALDIFDQM 249



 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 49/194 (25%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
 Frame = -3

Query: 563 TWSSYLLGCKDIDTLQ---QIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSI 393
           T+   L  C  I ++Q    +H  ++  G   +V ++  L+ +Y+  G I  A ++F  I
Sbjct: 159 TFPRVLKACGGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQI 218

Query: 392 PFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSM----RNPDNYSVTLALKACTAIQDVRL 225
            +  +D+  +N M+     +G + + ++++  M      PD+ +++  L   + I  ++ 
Sbjct: 219 EY--KDIVSWNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLL---SNISSMKF 273

Query: 224 GKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQ 45
              +H  V++ G+E +  + N LI MYA CG    A+ LF +MP +D++SWNS++ A+  
Sbjct: 274 KLHIHGWVIRHGVEWNLSIANSLIVMYAKCGKLNRAKWLFQQMPQKDMVSWNSIISAHFN 333

Query: 44  NGQAYDALKVFDNV 3
           + +A    +V +++
Sbjct: 334 SAEALTYFEVMESL 347


>gb|EMJ14405.1| hypothetical protein PRUPE_ppb012387mg [Prunus persica]
          Length = 588

 Score =  130 bits (326), Expect = 5e-28
 Identities = 71/198 (35%), Positives = 115/198 (58%), Gaps = 4/198 (2%)
 Frame = -3

Query: 584 NSTEKFITWSSYLLGCKDIDTLQQIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQL 405
           +ST +   + + L     +  LQQ+HG I++ GSH +  ++TKL+ L    G I    +L
Sbjct: 11  SSTPQSPVYRALLRAGPSLRALQQVHGHIVVSGSHRSRALLTKLITLACEAGSIFYTRRL 70

Query: 404 FQSIPFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----PDNYSVTLALKACTAIQ 237
           F S+P  + D +L+N +IK+    G  +  +  Y  M      P +YS T  +K+C  I 
Sbjct: 71  FLSVP--NPDSFLFNSLIKASSKFGFPQHTVFFYNRMLGFRIAPSSYSFTSVIKSCADIS 128

Query: 236 DVRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVV 57
            +RLG+ VH+HV+  G  SD++V   L+ +Y+  G    AR+LFDKMP R V++WNS++ 
Sbjct: 129 ALRLGRCVHSHVLVCGYGSDSFVQAALVTLYSKSGDLDAARKLFDKMPERSVVAWNSMIS 188

Query: 56  AYLQNGQAYDALKVFDNV 3
            Y QNG + +A++VF+ +
Sbjct: 189 GYEQNGFSREAIEVFNQM 206



 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 7/191 (3%)
 Frame = -3

Query: 563 TWSSYLLGCKDIDTLQQ---IHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSI 393
           +++S +  C DI  L+    +H  +++ G  ++  +   L+ LY+  G ++ A +LF  +
Sbjct: 116 SFTSVIKSCADISALRLGRCVHSHVLVCGYGSDSFVQAALVTLYSKSGDLDAARKLFDKM 175

Query: 392 PFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----PDNYSVTLALKACTAIQDVRL 225
           P   R V  +N MI     NG   + I ++  MR     PD+ +    L AC+ +  + L
Sbjct: 176 P--ERSVVAWNSMISGYEQNGFSREAIEVFNQMRELGVEPDSTTFVSVLAACSQLGALGL 233

Query: 224 GKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQ 45
           G  VH+ V+  GL  +  +   LI MYA CG    AR++FD M  R+VI+W +++  Y  
Sbjct: 234 GCSVHHDVINNGLHVNVALGTSLIIMYARCGNVSKAREVFDSMNERNVIAWTAMISGYAT 293

Query: 44  NGQAYDALKVF 12
           NG    A+++F
Sbjct: 294 NGYGIQAVELF 304


>gb|EMJ20518.1| hypothetical protein PRUPE_ppa019039mg [Prunus persica]
          Length = 519

 Score =  129 bits (323), Expect = 1e-27
 Identities = 69/191 (36%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
 Frame = -3

Query: 563 TWSSYLLGCKDIDTLQ---QIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSI 393
           T++S L  C     +    ++H  I       NV + +KLL LY S GYIE A+Q+F  +
Sbjct: 86  TFASLLETCYQFQAMDYGLRVHRLIPRSVLRRNVGISSKLLRLYASHGYIEEAHQVFDEM 145

Query: 392 PFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----PDNYSVTLALKACTAIQDVRL 225
           P      + +N +I      G YE  + LYF M      PD ++    LKAC  I  +++
Sbjct: 146 PKRDVSAFAWNSLISGYAELGLYEDAMALYFQMEEEGVEPDRFTFPRVLKACGGIGFIQI 205

Query: 224 GKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQ 45
           G+ VH H+V+ GL +D +V+N L+ MYA CG    AR++FDK+ +RD +SWN+++ +Y++
Sbjct: 206 GEAVHRHIVRLGLLNDRFVLNALVDMYAKCGDIVKARKVFDKITSRDHVSWNTMLTSYMR 265

Query: 44  NGQAYDALKVF 12
           +G    AL +F
Sbjct: 266 HGLLSQALDIF 276



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 5/182 (2%)
 Frame = -3

Query: 563 TWSSYLLGCKDIDTLQ---QIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSI 393
           T+   L  C  I  +Q    +H  I+  G  N+  ++  L+ +Y   G I  A ++F  I
Sbjct: 189 TFPRVLKACGGIGFIQIGEAVHRHIVRLGLLNDRFVLNALVDMYAKCGDIVKARKVFDKI 248

Query: 392 PFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRNPDNYSVTLALKAC--TAIQDVRLGK 219
              SRD   +N M+ S + +G   + ++++  M +  + + ++A+      A   + +  
Sbjct: 249 --TSRDHVSWNTMLTSYMRHGLLSQALDIFHEMLHEGHQADSVAISTILGAAESSLEIVI 306

Query: 218 MVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQNG 39
            +H  V++ G+E +  + N LIA Y++      AR LF  M  RDVI+WN+++ A+ ++ 
Sbjct: 307 QIHGWVIRQGVEWNLSIANALIAAYSNHRKLNRARWLFCHMSERDVITWNTMISAHSKSP 366

Query: 38  QA 33
           +A
Sbjct: 367 EA 368


>ref|XP_002512799.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223547810|gb|EEF49302.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1198

 Score =  129 bits (323), Expect = 1e-27
 Identities = 70/188 (37%), Positives = 108/188 (57%), Gaps = 4/188 (2%)
 Frame = -3

Query: 563  TWSSYLLGCKDIDTLQQIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSIPFN 384
            T  S +     + +L+ +H +++    H N+   T L+A YTSLG+I +AY LF +   N
Sbjct: 475  TCISLIKNTSGLHSLKALHASMLRSYLHLNLYFFTNLVAQYTSLGFISHAYSLFSTS--N 532

Query: 383  SRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----PDNYSVTLALKACTAIQDVRLGKM 216
              D +L+NVMI+  + +  Y   I LY  M      P N+++T   KAC  ++D+  GK 
Sbjct: 533  PTDAFLWNVMIRGFVDHAQYYDAILLYRQMVQLSIKPTNFTLTFVFKACGCLRDIEFGKQ 592

Query: 215  VHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQNGQ 36
            VH+  VK G + D +V+N LI MYA CG   ++RQ+FDKM  R+ I WNS++ A L   +
Sbjct: 593  VHDDAVKDGYKLDLFVLNSLITMYARCGSYELSRQVFDKMSDRNGICWNSMIGACLITER 652

Query: 35   AYDALKVF 12
              + +K+F
Sbjct: 653  YDEGVKLF 660



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 2/179 (1%)
 Frame = -3

Query: 542  GC-KDIDTLQQIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQLFQSIPFNSRDVYL 366
            GC +DI+  +Q+H   + DG   ++ ++  L+ +Y   G  E + Q+F  +  + R+   
Sbjct: 582  GCLRDIEFGKQVHDDAVKDGYKLDLFVLNSLITMYARCGSYELSRQVFDKM--SDRNGIC 639

Query: 365  YNVMIKSCIVNGSYEKCINLYFSMRNPD-NYSVTLALKACTAIQDVRLGKMVHNHVVKFG 189
            +N MI +C++   Y++ + L++ M            L     ++    G  V       G
Sbjct: 640  WNSMIGACLITERYDEGVKLFWQMSGEGIRLDRAALLNVMRCVRTENDGNGVSRVARDAG 699

Query: 188  LESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVVAYLQNGQAYDALKVF 12
               D YV N  I MYA CG   +AR +FD +  +D+++W +++ AY Q      +L +F
Sbjct: 700  FNLDQYVQNAAIGMYAKCGRLDLARSIFDGILNKDIVTWANMIEAYTQVDLPLQSLVLF 758



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 39/156 (25%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
 Frame = -3

Query: 452  LALYTSLGYIENAYQLFQSIPFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----P 285
            + +Y   G ++ A  +F  I   ++D+  +  MI++        + + L+  M      P
Sbjct: 711  IGMYAKCGRLDLARSIFDGIL--NKDIVTWANMIEAYTQVDLPLQSLVLFKQMMLQNACP 768

Query: 284  DNYSVTLALKACTAIQDVRLGKMVHNHVVKFG--LESDTYVVNCLIAMYAHCGFPGVARQ 111
            D+ ++   ++ACT +  ++    VH  V+  G    S+  V   +  +YA CG    AR+
Sbjct: 769  DSVTLLSVVRACTILASLQHAHAVHGIVIVTGGFFNSELAVETAVTDLYAKCGSLTYARK 828

Query: 110  LFDKMPTRDVISWNSLVVAYLQNGQAYDALKVFDNV 3
            +FD+M  R++ISW++++  Y  +G   +AL +F+ +
Sbjct: 829  VFDRMQNRNIISWSAIISGYGMHGHGREALDLFNEM 864


>ref|XP_004235427.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Solanum lycopersicum]
          Length = 606

 Score =  128 bits (322), Expect = 1e-27
 Identities = 67/192 (34%), Positives = 109/192 (56%), Gaps = 4/192 (2%)
 Frame = -3

Query: 584 NSTEKFITWSSYLLGCKDIDTLQQIHGTIIIDGSHNNVIMVTKLLALYTSLGYIENAYQL 405
           NST+ + +     +  K +   +Q+H  + + G   N+ + TKL+ LY     + NA+ L
Sbjct: 31  NSTQHYASLLQSCIARKAVQPGKQLHAHLCLTGLGYNINLATKLVNLYCVCDKLPNAHHL 90

Query: 404 FQSIPFNSRDVYLYNVMIKSCIVNGSYEKCINLYFSMRN----PDNYSVTLALKACTAIQ 237
           F  IP    +++L+NV+I+    NG YE  I+LY  M +    PDN++    LKAC+A+ 
Sbjct: 91  FDRIP--KGNIFLWNVLIRGYAWNGPYEAAISLYHQMIDYGHVPDNFTFPFVLKACSALS 148

Query: 236 DVRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGFPGVARQLFDKMPTRDVISWNSLVV 57
            + +GK +H++  +   + D +V   LI MYA CG  G +R++F+ +  RDV+ WNS++ 
Sbjct: 149 AIEVGKDIHDYAKRTKWDKDVFVGAALIDMYAKCGCVGRSREVFENVVERDVVVWNSMLA 208

Query: 56  AYLQNGQAYDAL 21
           AY QNG   D L
Sbjct: 209 AYSQNGHPEDCL 220



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
 Frame = -3

Query: 476 NVIMVTKLLALYTSLGYIENAYQLFQSIPFNSRDVYLYNVMIKSCIVNGSYEKCINLYFS 297
           +V +   L+ +Y   G +  + ++F+++    RDV ++N M+ +   NG  E C+ L   
Sbjct: 168 DVFVGAALIDMYAKCGCVGRSREVFENVV--ERDVVVWNSMLAAYSQNGHPEDCLALCGE 225

Query: 296 MR----NPDNYSVTLALKACTAIQDVRLGKMVHNHVVKFGLESDTYVVNCLIAMYAHCGF 129
           M      P   ++  A+ A   +  +R G+ +H +  + G +S   V   L+ MYA  G 
Sbjct: 226 MACGGIRPTEATLVTAISASADVAALRQGRELHGYSWRQGFDSLDKVKTALVDMYAKSGS 285

Query: 128 PGVARQLFDKMPTRDVISWNSLVVAYLQNGQAYDALKVFDNV 3
             VAR LF+ +  + V+SWN+++  Y  +G A  AL +F+ +
Sbjct: 286 VKVARILFEGLQEKRVVSWNAMITGYAMHGHANAALCLFNEM 327