BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00029178
         (653 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526753.1| pentatricopeptide repeat-containing protein,...   117   2e-24
ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat...   117   4e-24
emb|CBI29893.3| unnamed protein product [Vitis vinifera]              117   4e-24
ref|XP_006489265.1| PREDICTED: pentatricopeptide repeat-containi...   115   1e-23
ref|XP_006419615.1| hypothetical protein CICLE_v10004576mg [Citr...   115   1e-23
ref|XP_001785140.1| predicted protein [Physcomitrella patens] gi...   114   2e-23
ref|XP_006850136.1| hypothetical protein AMTR_s00022p00232590 [A...   113   4e-23
ref|XP_002983523.1| hypothetical protein SELMODRAFT_118230 [Sela...   112   7e-23
gb|EXC30917.1| hypothetical protein L484_028099 [Morus notabilis]     112   1e-22
ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Sela...   112   1e-22
ref|XP_002322694.1| pentatricopeptide repeat-containing family p...   112   1e-22
ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   111   2e-22
ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containi...   111   2e-22
ref|XP_006299919.1| hypothetical protein CARUB_v10016128mg [Caps...   111   2e-22
ref|XP_004234765.1| PREDICTED: putative pentatricopeptide repeat...   111   2e-22
gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygr...   110   3e-22
ref|XP_002882843.1| pentatricopeptide repeat-containing protein ...   110   3e-22
gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis]     110   4e-22
ref|XP_006407010.1| hypothetical protein EUTSA_v10022068mg [Eutr...   110   5e-22
gb|EMT11227.1| hypothetical protein F775_16951 [Aegilops tauschii]    110   5e-22

>ref|XP_002526753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533942|gb|EEF35667.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 818

 Score =  117 bits (294), Expect = 2e-24
 Identities = 71/169 (42%), Positives = 96/169 (56%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +L++C    +  I  GQ  HAH IK+  Y    Y    LI  Y K  LL  +R VFDEM 
Sbjct: 481 LLNECVNNKA--IREGQRVHAHIIKT-YYLPSVYLRTRLIVFYTKCDLLMDARHVFDEMS 537

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
           E ++VSW+A+I  Y+  G + ET+ L+ +ML    S I PN+FT + +L  C +A   E 
Sbjct: 538 ERNVVSWTAMISGYSRRGFAFETLHLFVRMLR---SDIEPNEFTLATVLTSCTDASGSEL 594

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           G QIH+ I+K  YD      S +FVGS LL+MY K G I  AR VF+ +
Sbjct: 595 GRQIHSLIIKCNYD------SHIFVGSSLLDMYAKAGRILEARMVFESL 637



 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 47/169 (27%), Positives = 96/169 (56%)
 Frame = +2

Query: 146  ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
            +L+ CT  + + +  G+  H+  IK   Y    +  + L++MYAK   +  +R VF+ + 
Sbjct: 582  VLTSCTDASGSEL--GRQIHSLIIKCN-YDSHIFVGSSLLDMYAKAGRILEARMVFESLP 638

Query: 326  EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
            E D+VS +A+I  YA +G   E ++L++++  +GLS    N  T++++L   +   +++H
Sbjct: 639  ERDVVSCTAIISGYAQLGLDEEALELFRRLEREGLSS---NCVTYASVLTSLSGLAALDH 695

Query: 506  GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
            G Q+H+ +++       +    + + + +++MY KCG +  AR++FD M
Sbjct: 696  GKQVHSHVLR------RELPFYVVLQNSMIDMYSKCGSLNYARRIFDSM 738



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 34/120 (28%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
 Frame = +2

Query: 182  ISHGQASHAHFIKSGAYSLDNYHC--NYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSAL 355
            + HG+  H+H ++     L  Y    N +I+MY+K   L  +R++FD M E  ++SW+A+
Sbjct: 693  LDHGKQVHSHVLRR---ELPFYVVLQNSMIDMYSKCGSLNYARRIFDSMPERTVISWNAM 749

Query: 356  IGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMK 535
            +  Y   G   E ++L+K M ++  +++ P+  T   +L GC++    + G++I  +++K
Sbjct: 750  LVGYGKHGMGREVVELFKLMRTE--NKVKPDSVTILAVLSGCSHGGFEDKGLEIFDEMLK 807


>ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  117 bits (292), Expect = 4e-24
 Identities = 67/167 (40%), Positives = 100/167 (59%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +L++C + T+  I  GQ  HAH IK+  Y    Y    LI +Y K + L  +R+V DEM 
Sbjct: 483 VLTECISQTA--IREGQRVHAHMIKT-CYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 539

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
           E ++VSW+A+I  Y+  G +SE + L+ +ML  G +   PN+FTF+ +L  C ++   + 
Sbjct: 540 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTA---PNEFTFATVLTSCTSSSGFQL 596

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFD 646
           G QIH+ ++K        F S +FVGS LL+MY K G+I  AR+VFD
Sbjct: 597 GRQIHSLVIK------TSFESHIFVGSSLLDMYAKAGKICEARRVFD 637



 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 48/169 (28%), Positives = 100/169 (59%)
 Frame = +2

Query: 146  ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
            +L+ CT+++   +  G+  H+  IK+ ++    +  + L++MYAK   +  +R+VFD + 
Sbjct: 584  VLTSCTSSSGFQL--GRQIHSLVIKT-SFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640

Query: 326  EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
            E D+VS +A+I  YA +G   E +DL++++  +G+     N  T++++L   +   +++H
Sbjct: 641  ERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRS---NYVTYASVLTALSGLAALDH 697

Query: 506  GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
            G Q+H+ +++      L F   + + + L++MY KCG +  +R++FD M
Sbjct: 698  GRQVHSHVLR----AKLPF--YVVLQNSLIDMYSKCGSLTYSRRIFDSM 740



 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 46/161 (28%), Positives = 90/161 (55%), Gaps = 4/161 (2%)
 Frame = +2

Query: 182  ISHGQASHAHFIKSGAYSLDNYHC--NYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSAL 355
            + HG+  H+H +++    L  Y    N LI+MY+K   L  SR++FD M E  ++SW+A+
Sbjct: 695  LDHGRQVHSHVLRA---KLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAM 751

Query: 356  IGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIM- 532
            +  Y+  G   E ++L+K  L K  +++ P+  TF  +L GC++    + G++I  +++ 
Sbjct: 752  LVGYSKHGLGREAVELFK--LMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVN 809

Query: 533  -KFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
             K G++P ++   C      +++++G+ G +  A +   KM
Sbjct: 810  QKDGFEPEIEHYGC------VVDLFGRAGRVEEAFEFIKKM 844


>emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  117 bits (292), Expect = 4e-24
 Identities = 67/167 (40%), Positives = 100/167 (59%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +L++C + T+  I  GQ  HAH IK+  Y    Y    LI +Y K + L  +R+V DEM 
Sbjct: 16  VLTECISQTA--IREGQRVHAHMIKT-CYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
           E ++VSW+A+I  Y+  G +SE + L+ +ML  G +   PN+FTF+ +L  C ++   + 
Sbjct: 73  ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTA---PNEFTFATVLTSCTSSSGFQL 129

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFD 646
           G QIH+ ++K        F S +FVGS LL+MY K G+I  AR+VFD
Sbjct: 130 GRQIHSLVIK------TSFESHIFVGSSLLDMYAKAGKICEARRVFD 170



 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 48/169 (28%), Positives = 100/169 (59%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +L+ CT+++   +  G+  H+  IK+ ++    +  + L++MYAK   +  +R+VFD + 
Sbjct: 117 VLTSCTSSSGFQL--GRQIHSLVIKT-SFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
           E D+VS +A+I  YA +G   E +DL++++  +G+     N  T++++L   +   +++H
Sbjct: 174 ERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRS---NYVTYASVLTALSGLAALDH 230

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           G Q+H+ +++      L F   + + + L++MY KCG +  +R++FD M
Sbjct: 231 GRQVHSHVLR----AKLPF--YVVLQNSLIDMYSKCGSLTYSRRIFDSM 273



 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 46/161 (28%), Positives = 90/161 (55%), Gaps = 4/161 (2%)
 Frame = +2

Query: 182 ISHGQASHAHFIKSGAYSLDNYHC--NYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSAL 355
           + HG+  H+H +++    L  Y    N LI+MY+K   L  SR++FD M E  ++SW+A+
Sbjct: 228 LDHGRQVHSHVLRA---KLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAM 284

Query: 356 IGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIM- 532
           +  Y+  G   E ++L+K  L K  +++ P+  TF  +L GC++    + G++I  +++ 
Sbjct: 285 LVGYSKHGLGREAVELFK--LMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVN 342

Query: 533 -KFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
            K G++P ++   C      +++++G+ G +  A +   KM
Sbjct: 343 QKDGFEPEIEHYGC------VVDLFGRAGRVEEAFEFIKKM 377


>ref|XP_006489265.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g15720-like [Citrus sinensis]
          Length = 605

 Score =  115 bits (287), Expect = 1e-23
 Identities = 62/150 (41%), Positives = 95/150 (63%)
 Frame = +2

Query: 203 HAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIGSYAHMGN 382
           H+  +KSG  S + +  N+LIN Y + K  +V+RQ+FDEM EP++VS+++L+  Y +MG 
Sbjct: 50  HSEILKSGFLS-NTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108

Query: 383 SSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMKFGYDPMLDF 562
               + L++KML    + + PN+FTF+ ++K C+    +  G QIHT I  FG      F
Sbjct: 109 PQIALLLFQKMLG---NLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFG------F 159

Query: 563 RSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           +  L VGS L++MYGKC ++  AR+VFD M
Sbjct: 160 QYNLVVGSSLVDMYGKCNDVDGARRVFDLM 189



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 42/168 (25%), Positives = 89/168 (52%), Gaps = 1/168 (0%)
 Frame = +2

Query: 131 HLAVDILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQV 310
           H+   +++ C +     +  G+ +H   ++SG+   ++   + L++MYAK   +  S +V
Sbjct: 231 HMLASVINACASLGR--LVSGKVAHGVVVRSGS-EFNDVVASALVDMYAKCGCVNYSEKV 287

Query: 311 FDEMQEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANA 490
           F+ +  P +V+++++I   A  G    ++DL+ KM+S+G+    PN  TF  +L  C+++
Sbjct: 288 FNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNKMISRGIK---PNDVTFVGVLHACSHS 344

Query: 491 DSVEHGMQ-IHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRA 631
             V+ G+Q + +   K+G  P     +C      +++M G+ G +  A
Sbjct: 345 GLVDEGIQHLDSMYRKYGIIPDAKHYTC------VVDMLGRTGRLDEA 386



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 39/154 (25%), Positives = 83/154 (53%)
 Frame = +2

Query: 191 GQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIGSYA 370
           G+  H H I++  +  +    + L++MY K   +  +R+VFD M   ++VSW+++I ++A
Sbjct: 147 GKQIHTH-IETFGFQYNLVVGSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHA 205

Query: 371 HMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMKFGYDP 550
                 E ++++++   +  S+  PNQ   ++++  CA+   +  G   H  +++ G   
Sbjct: 206 QNAQGHEALEMFREFNYQ--SRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSG--- 260

Query: 551 MLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
             +F     V S L++MY KCG +  + +VF+++
Sbjct: 261 -SEFND--VVASALVDMYAKCGCVNYSEKVFNRI 291


>ref|XP_006419615.1| hypothetical protein CICLE_v10004576mg [Citrus clementina]
           gi|557521488|gb|ESR32855.1| hypothetical protein
           CICLE_v10004576mg [Citrus clementina]
          Length = 605

 Score =  115 bits (287), Expect = 1e-23
 Identities = 62/150 (41%), Positives = 95/150 (63%)
 Frame = +2

Query: 203 HAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIGSYAHMGN 382
           H+  +KSG  S + +  N+LIN Y + K  +V+RQ+FDEM EP++VS+++L+  Y +MG 
Sbjct: 50  HSEILKSGFLS-NTFTLNHLINCYVRLKKTQVARQLFDEMLEPNVVSYTSLMAGYINMGQ 108

Query: 383 SSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMKFGYDPMLDF 562
               + L++KML    + + PN+FTF+ ++K C+    +  G QIHT I  FG      F
Sbjct: 109 PQIALLLFQKMLG---NLVWPNEFTFATVIKACSMLADLITGKQIHTHIETFG------F 159

Query: 563 RSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           +  L VGS L++MYGKC ++  AR+VFD M
Sbjct: 160 QYNLVVGSSLVDMYGKCNDVDGARRVFDLM 189



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 42/168 (25%), Positives = 89/168 (52%), Gaps = 1/168 (0%)
 Frame = +2

Query: 131 HLAVDILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQV 310
           H+   +++ C +     +  G+ +H   ++SG+   ++   + L++MYAK   +  S +V
Sbjct: 231 HMLASVINACASLGR--LVSGKVAHGVVVRSGS-EFNDVVASALVDMYAKCGCVNYSEKV 287

Query: 311 FDEMQEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANA 490
           F+ +  P +V+++++I   A  G    ++DL+ KM+S+G+    PN  TF  +L  C+++
Sbjct: 288 FNRISNPSVVTYTSMIVGAAKYGLGRFSLDLFNKMISRGIK---PNDVTFVGVLHACSHS 344

Query: 491 DSVEHGMQ-IHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRA 631
             V+ G+Q + +   K+G  P     +C      +++M G+ G +  A
Sbjct: 345 GLVDEGIQHLDSMYRKYGIIPDAKHYTC------VVDMLGRTGRLDEA 386



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 39/154 (25%), Positives = 83/154 (53%)
 Frame = +2

Query: 191 GQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIGSYA 370
           G+  H H I++  +  +    + L++MY K   +  +R+VFD M   ++VSW+++I ++A
Sbjct: 147 GKQIHTH-IETFGFQYNLVVGSSLVDMYGKCNDVDGARRVFDLMGCRNVVSWTSIIVAHA 205

Query: 371 HMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMKFGYDP 550
                 E ++++++   +  S+  PNQ   ++++  CA+   +  G   H  +++ G   
Sbjct: 206 QNAQGHEALEMFREFNYQ--SRDRPNQHMLASVINACASLGRLVSGKVAHGVVVRSG--- 260

Query: 551 MLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
             +F     V S L++MY KCG +  + +VF+++
Sbjct: 261 -SEFND--VVASALVDMYAKCGCVNYSEKVFNRI 291


>ref|XP_001785140.1| predicted protein [Physcomitrella patens]
           gi|162663262|gb|EDQ50036.1| predicted protein
           [Physcomitrella patens]
          Length = 922

 Score =  114 bits (286), Expect = 2e-23
 Identities = 61/171 (35%), Positives = 99/171 (57%)
 Frame = +2

Query: 140 VDILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDE 319
           + ILS C T     +  G+  H+H  K+G Y  D      LINMY K   L+++R+VF+E
Sbjct: 156 ISILSACQTPIV--LEFGEQIHSHITKAG-YESDVNVSTALINMYCKCGSLELARKVFNE 212

Query: 320 MQEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSV 499
           M+E ++VSW+A+I  Y   G+S E   L++K++  G     PN+ +F+++L  C N + +
Sbjct: 213 MRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQ---PNKVSFASILGACTNPNDL 269

Query: 500 EHGMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           E G+++H  I + G +        + VG+ L+ MY +CG +  ARQVFD +
Sbjct: 270 EQGLKLHAYIKQAGLEQE------VLVGNALISMYARCGSLANARQVFDNL 314



 Score =  103 bits (257), Expect = 4e-20
 Identities = 61/168 (36%), Positives = 95/168 (56%)
 Frame = +2

Query: 149 LSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQE 328
           L +C    S  ++ G+  H H ++S  +  D Y  N LI+MY+K   ++ +  VF  M++
Sbjct: 58  LQECVQAKS--LAEGKKVHDH-MRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMED 114

Query: 329 PDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHG 508
            D+VSW+A+I  YA  G   E +DL+ +M  +GL    PNQ +F ++L  C     +E G
Sbjct: 115 KDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLK---PNQNSFISILSACQTPIVLEFG 171

Query: 509 MQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
            QIH+ I K GY+      S + V + L+ MY KCG +  AR+VF++M
Sbjct: 172 EQIHSHITKAGYE------SDVNVSTALINMYCKCGSLELARKVFNEM 213



 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 57/169 (33%), Positives = 92/169 (54%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           IL  CT      +  G   HA +IK      +    N LI+MYA+   L  +RQVFD ++
Sbjct: 259 ILGACTNPND--LEQGLKLHA-YIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLR 315

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
            P+ VSW+A+I  Y   G   E   L++ M  KG     P++FT+++LL  CA+   +  
Sbjct: 316 SPNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQ---PDRFTYASLLAICADRADLNR 371

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           G ++H+QI++  ++      + + V + L+ MY KCG +  AR+VF++M
Sbjct: 372 GKELHSQIVRTAWE------ADVTVATALISMYAKCGSLEEARKVFNQM 414



 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 50/154 (32%), Positives = 83/154 (53%)
 Frame = +2

Query: 182 ISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIG 361
           ++ G+  H+  +++ A+  D      LI+MYAK   L+ +R+VF++M E + VSW+A I 
Sbjct: 369 LNRGKELHSQIVRT-AWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIA 427

Query: 362 SYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMKFG 541
                G+  E   ++K+M       +IP+  TF  LL  C + +  E G  IH +I ++G
Sbjct: 428 CCCRHGSEKEAFQVFKQMRR---DDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWG 484

Query: 542 YDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVF 643
                   S   V + L+ MYG+CG++  AR+VF
Sbjct: 485 ------MLSNNLVANALISMYGRCGKLADAREVF 512



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 51/168 (30%), Positives = 87/168 (51%)
 Frame = +2

Query: 140 VDILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDE 319
           + +L+ CT+        G+  H    + G  S +N   N LI+MY +   L  +R+VF  
Sbjct: 458 ITLLNSCTSPED--FERGRYIHGKIDQWGMLS-NNLVANALISMYGRCGKLADAREVFYR 514

Query: 320 MQEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSV 499
           ++  D+ SW+A+I +Y   G +    DL+ K  S+G      +++TF N+L+  AN + +
Sbjct: 515 IRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGK---GDKYTFINVLRAIANLEDL 571

Query: 500 EHGMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVF 643
           + G +IH  + K G +   D R    + + L++MY KCG +  A  VF
Sbjct: 572 DAGRKIHGLVEKAGLEK--DIR----ILTTLIKMYSKCGSLRDAYSVF 613



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 32/110 (29%), Positives = 63/110 (57%)
 Frame = +2

Query: 260 LINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQI 439
           LI MY+K   L+ +  VF  +QE D+V W+A++ +Y H  +  + + L+++M  +G++  
Sbjct: 596 LIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVN-- 653

Query: 440 IPNQFTFSNLLKGCANADSVEHGMQIHTQIMKFGYDPMLDFRSCLFVGSG 589
            P+  T++++L  CA   ++EHG + HTQ+ +   +      +C+    G
Sbjct: 654 -PDSATYTSVLNACARLGAIEHGKKFHTQLKEAAMETDTRHYACMVAALG 702


>ref|XP_006850136.1| hypothetical protein AMTR_s00022p00232590 [Amborella trichopoda]
           gi|548853734|gb|ERN11717.1| hypothetical protein
           AMTR_s00022p00232590 [Amborella trichopoda]
          Length = 321

 Score =  113 bits (283), Expect = 4e-23
 Identities = 65/175 (37%), Positives = 99/175 (56%)
 Frame = +2

Query: 128 YHLAVDILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQ 307
           +H    +L++C    +  ++HG+  H H IK+  Y    Y    L+  Y K   L  +R 
Sbjct: 63  FHFYDSVLTECVNNKA--LNHGKRVHTHMIKT-CYRPSVYLGTRLLIFYTKCDCLGDARL 119

Query: 308 VFDEMQEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCAN 487
           +F+ M E ++VSW+A+I +Y+  G+SSE + L+ KML    +   PN+FTF+ +L  C  
Sbjct: 120 LFERMPERNVVSWTAMISAYSRRGHSSEALSLFVKMLG---ADFQPNEFTFATVLTCCNG 176

Query: 488 ADSVEHGMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
               +HG QIH+ ++K        F+S +FV S LL+MY K G+I  ARQVFD M
Sbjct: 177 NFGFDHGKQIHSLLVK------THFKSHIFVSSSLLDMYAKAGKIHDARQVFDGM 225



 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 39/123 (31%), Positives = 71/123 (57%)
 Frame = +2

Query: 188 HGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIGSY 367
           HG+  H+  +K+  +    +  + L++MYAK   +  +RQVFD M++ DIVS +A+I  Y
Sbjct: 182 HGKQIHSLLVKTH-FKSHIFVSSSLLDMYAKAGKIHDARQVFDGMKDRDIVSCTAIIAGY 240

Query: 368 AHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMKFGYD 547
           A +G   E + L++++  +G+    PN  TF+ +L   +   ++E+G Q+H Q  + G +
Sbjct: 241 AQLGLDEEALKLFRQLQKEGMR---PNYVTFTTVLMALSGLAALEYGEQVHGQRSRDGNE 297

Query: 548 PML 556
             L
Sbjct: 298 EEL 300


>ref|XP_002983523.1| hypothetical protein SELMODRAFT_118230 [Selaginella moellendorffii]
           gi|300148766|gb|EFJ15424.1| hypothetical protein
           SELMODRAFT_118230 [Selaginella moellendorffii]
          Length = 506

 Score =  112 bits (281), Expect = 7e-23
 Identities = 59/169 (34%), Positives = 98/169 (57%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +L+ C+   +  +  G+  H   + +G +  D    N L+NMYAK   +  +R+VFD M+
Sbjct: 66  VLAACSAVEA--LEQGKEVHRQMVDAG-FQFDAAAENSLVNMYAKCGSITEAREVFDGMK 122

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
           +  +VSW+ +I +Y   G+  E +DLY+KM S+G+    PN  TF+++L  C++  ++E 
Sbjct: 123 QRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVE---PNGITFASVLSACSSLGALEE 179

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           G  +H Q+   GY P       L V + L+ +YGKCG +  AR+VFD+M
Sbjct: 180 GKAVHAQMKAAGYKP------DLAVANALVSLYGKCGSVDSARKVFDRM 222



 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 56/169 (33%), Positives = 91/169 (53%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +LS C++  +  +  G+A HA  +K+  Y  D    N L+++Y K   +  +R+VFD M+
Sbjct: 167 VLSACSSLGA--LEEGKAVHAQ-MKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMK 223

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
             ++VSW+A+I SYAH  +S E + LYK M       + PN  T +++L  CA+  + E 
Sbjct: 224 IRNVVSWTAMISSYAHHRHSEEAIQLYKAM------DVAPNAVTLASVLSACASLGNAEE 277

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           G  +H ++         D      + + LL MY KCG+   AR++FD M
Sbjct: 278 GRAVHEKLASTTTGLATD----EVLQNALLNMYAKCGDGDAARKIFDAM 322



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 44/128 (34%), Positives = 75/128 (58%)
 Frame = +2

Query: 269 MYAKRKLLKVSRQVFDEMQEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPN 448
           M+AK   LK SR+VFD+ +  D++ W+++I +Y+  G+  E ++L+K M S     + PN
Sbjct: 1   MFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSS-PPVEPN 59

Query: 449 QFTFSNLLKGCANADSVEHGMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFR 628
             T++ +L  C+  +++E G ++H Q++  G      F+      + L+ MY KCG I  
Sbjct: 60  AITYTTVLAACSAVEALEQGKEVHRQMVDAG------FQFDAAAENSLVNMYAKCGSITE 113

Query: 629 ARQVFDKM 652
           AR+VFD M
Sbjct: 114 AREVFDGM 121


>gb|EXC30917.1| hypothetical protein L484_028099 [Morus notabilis]
          Length = 706

 Score =  112 bits (280), Expect = 1e-22
 Identities = 65/166 (39%), Positives = 96/166 (57%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +L++C +  +  +  GQ  HAH IK+  +    Y    LI +YAK   L  +R+V DEM 
Sbjct: 16  LLNECVSQGT--VKEGQTVHAHMIKTCYFPSLVYLSTRLIVLYAKCDCLDDARKVLDEMT 73

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
             ++VSW+A+I  Y+  G +SE ++L+ +ML  G     PN+FTF+ +L  C  +  +E 
Sbjct: 74  LRNVVSWTAMISVYSQKGYASEALNLFVQMLRSGTE---PNEFTFATVLTSCTCSSGLEL 130

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVF 643
           G QIH+ ++K        F S +FVGS LL+MY K G I  ARQVF
Sbjct: 131 GRQIHSFVLK------TSFESHMFVGSSLLDMYAKAGRIHDARQVF 170



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 47/169 (27%), Positives = 99/169 (58%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +L+ CT ++   +  G+  H+  +K+ ++    +  + L++MYAK   +  +RQVF  + 
Sbjct: 118 VLTSCTCSSGLEL--GRQIHSFVLKT-SFESHMFVGSSLLDMYAKAGRIHDARQVFTCLP 174

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
           E D+VS +A+I  YA +G   E ++L++++L +G+   +PN  T+++LL   +   +++ 
Sbjct: 175 ERDVVSCTAIISGYAQLGFDEEALELFRQLLREGM---VPNHVTYASLLTALSGLAALDL 231

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           G Q+H+ +++          + + + + L++MY KCG +  +R+VFD M
Sbjct: 232 GRQVHSHVLR------SKVPTFIVLQNSLIDMYSKCGNLAYSRRVFDSM 274



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 2/156 (1%)
 Frame = +2

Query: 191 GQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIGSYA 370
           G+  H+H ++S   +      N LI+MY+K   L  SR+VFD M E  ++SW+A++  Y+
Sbjct: 232 GRQVHSHVLRSKVPTFIVLQ-NSLIDMYSKCGNLAYSRRVFDSMTERSVISWNAMLVGYS 290

Query: 371 HMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMK--FGY 544
             G   E ++L+  M  +   +  P   TF  +L GC++    + G++I  ++ K  +G 
Sbjct: 291 KHGMGREVVELFDLMRKENKEK--PVSVTFLAVLSGCSHGGMEDKGLEIFYEMKKGTYGA 348

Query: 545 DPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           +P +   +C      ++++ G+   I  A +  +KM
Sbjct: 349 EPEMVHYAC------VVDLLGRASRINEAFEFINKM 378


>ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
           gi|300158197|gb|EFJ24820.1| hypothetical protein
           SELMODRAFT_100621 [Selaginella moellendorffii]
          Length = 616

 Score =  112 bits (280), Expect = 1e-22
 Identities = 59/169 (34%), Positives = 97/169 (57%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +L+ C+      +  G+  H   + +G +  D    N L+NMYAK   +  +R+VFD M+
Sbjct: 276 VLAACSAVED--LEQGKEVHRQMVDAG-FQFDAAAENSLVNMYAKCGSITEAREVFDGMK 332

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
           +  +VSW+ +I +Y   G+  E +DLY+KM S+G+    PN  TF+++L  C++  ++E 
Sbjct: 333 QRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVE---PNGITFASVLSACSSLGALEE 389

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           G  +H Q+   GY P       L V + L+ +YGKCG +  AR+VFD+M
Sbjct: 390 GKAVHAQMKAAGYKP------DLAVANALVSLYGKCGSVDSARKVFDRM 432



 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 53/169 (31%), Positives = 93/169 (55%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +L+ C++     +  G+  HAH +K      D +  + L+ M+AK   LK SR+VFD+ +
Sbjct: 171 VLNACSSLGPRALEVGKEIHAH-MKRIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCR 229

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
             D++ W+++I +Y+  G+  E ++L+K M S     + PN  T++ +L  C+  + +E 
Sbjct: 230 WKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSS-PPVEPNAITYTTVLAACSAVEDLEQ 288

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           G ++H Q++  G      F+      + L+ MY KCG I  AR+VFD M
Sbjct: 289 GKEVHRQMVDAG------FQFDAAAENSLVNMYAKCGSITEAREVFDGM 331



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 54/157 (34%), Positives = 87/157 (55%), Gaps = 2/157 (1%)
 Frame = +2

Query: 182 ISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIG 361
           ++ G+  H H +K+G Y  + Y  N+L+ MY+K   L+ +++VFD M+  D +SWS +I 
Sbjct: 83  LAAGKKIHEHVVKNGYYE-NVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRDSISWSKMIA 141

Query: 362 SYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANAD--SVEHGMQIHTQIMK 535
            Y   G + E + LYK M       I P+ FTFS +L  C++    ++E G +IH  + +
Sbjct: 142 GYVRHGLAREAIKLYKAM------AIDPDGFTFSAVLNACSSLGPRALEVGKEIHAHMKR 195

Query: 536 FGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFD 646
               P       +FV S L+ M+ KCG +  +R+VFD
Sbjct: 196 IWLKP------DVFVDSALVTMFAKCGSLKESREVFD 226



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 39/119 (32%), Positives = 68/119 (57%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +LS C++  +  +  G+A HA  +K+  Y  D    N L+++Y K   +  +R+VFD M+
Sbjct: 377 VLSACSSLGA--LEEGKAVHAQ-MKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMK 433

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVE 502
             ++VSW+A+I +YAH  +S E + LYK M  +G+     + F +  +L  C+ A  +E
Sbjct: 434 IRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQ---ASSFIYGTVLTACSQAGLLE 489


>ref|XP_002322694.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222867324|gb|EEF04455.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 586

 Score =  112 bits (280), Expect = 1e-22
 Identities = 66/167 (39%), Positives = 94/167 (56%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +L++C    +  +  GQ  HAH IK+  Y    Y    LI +Y K + L  +R VFDEM+
Sbjct: 16  LLNECVNKRA--VREGQRVHAHMIKT-CYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
           E ++VSW+A+I  Y+  G +SE + L+ +ML    S   PN+FTF+ +L  C      E 
Sbjct: 73  ERNVVSWTAMISGYSQRGFASEALHLFVQMLR---SDTEPNEFTFATVLSSCTGFSGFEL 129

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFD 646
           G QIH+ I K  Y+      + +FVGS LL+MY K G I  AR VF+
Sbjct: 130 GRQIHSHIFKRNYE------NHIFVGSSLLDMYAKAGRIHEARGVFE 170



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 48/169 (28%), Positives = 94/169 (55%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +LS CT  +   +  G+  H+H  K   Y    +  + L++MYAK   +  +R VF+ + 
Sbjct: 117 VLSSCTGFSGFEL--GRQIHSHIFKRN-YENHIFVGSSLLDMYAKAGRIHEARGVFECLP 173

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
           E D+VS +A+I  YA +G   E ++L+ ++  +G+S    N  T+++LL   +   +++H
Sbjct: 174 ERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSS---NYVTYASLLTALSGLAALDH 230

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           G Q+H+ +++       +    + + + L++MY KCG +  AR++F+ M
Sbjct: 231 GKQVHSHVLR------CELPFYVVLQNSLIDMYSKCGNLNYARKIFNNM 273



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 40/161 (24%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
 Frame = +2

Query: 182 ISHGQASHAHFIKSGAYSLDNYHC--NYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSAL 355
           + HG+  H+H ++     L  Y    N LI+MY+K   L  +R++F+ M    ++SW+A+
Sbjct: 228 LDHGKQVHSHVLRC---ELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAM 284

Query: 356 IGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMK 535
           +  Y+  G   E + L+K M  +  +++ P+  TF  +L GC++    + G+++  ++M 
Sbjct: 285 LVGYSKHGKGIEVVKLFKLMREE--NKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMN 342

Query: 536 FG--YDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
            G   +  ++   C      ++++ G+ G +  A ++  KM
Sbjct: 343 GGDEIEAGIEHYGC------VIDLLGRAGRVEEAFELIKKM 377


>ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  111 bits (278), Expect = 2e-22
 Identities = 63/169 (37%), Positives = 96/169 (56%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +L+KCT      +  G+A HAH I+S  +  D    N+++NMYAK   L+ ++ +FD+M 
Sbjct: 111 MLNKCTYLRK--LKQGRAIHAH-IQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
             D+VSW+ LI  Y+  G +SE + L+ KML  G     PN+FT S+LLK      S  H
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ---PNEFTLSSLLKASGTGPSDHH 224

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           G Q+H   +K+GYD        + VGS LL+MY +   +  A+ +F+ +
Sbjct: 225 GRQLHAFSLKYGYD------MNVHVGSSLLDMYARWAHMREAKVIFNSL 267



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 49/155 (31%), Positives = 91/155 (58%)
 Frame = +2

Query: 188 HGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIGSY 367
           HG+  HA  +K G Y ++ +  + L++MYA+   ++ ++ +F+ +   ++VSW+ALI  +
Sbjct: 224 HGRQLHAFSLKYG-YDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGH 282

Query: 368 AHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMKFGYD 547
           A  G     M L+ +ML +G     P  FT+S++L  CA++ S+E G  +H  ++K G  
Sbjct: 283 ARKGEGEHVMRLFXQMLRQGFE---PTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQ 338

Query: 548 PMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           P+       ++G+ L++MY K G I  A++VF ++
Sbjct: 339 PI------AYIGNTLIDMYAKSGSIKDAKKVFRRL 367



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 45/135 (33%), Positives = 80/135 (59%)
 Frame = +2

Query: 131 HLAVDILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQV 310
           H     +  C ++ S  +  G+  HAH IKSG   +  Y  N LI+MYAK   +K +++V
Sbjct: 307 HFTYSSVLACASSGS--LEQGKWVHAHVIKSGGQPIA-YIGNTLIDMYAKSGSIKDAKKV 363

Query: 311 FDEMQEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANA 490
           F  + + DIVSW+++I  YA  G  +E + L+++ML    +++ PN+ TF ++L  C+++
Sbjct: 364 FRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLK---AKVQPNEITFLSVLTACSHS 420

Query: 491 DSVEHGMQIHTQIMK 535
             ++ G Q + ++MK
Sbjct: 421 GLLDEG-QYYFELMK 434


>ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  111 bits (278), Expect = 2e-22
 Identities = 63/169 (37%), Positives = 96/169 (56%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +L+KCT      +  G+A HAH I+S  +  D    N+++NMYAK   L+ ++ +FD+M 
Sbjct: 111 MLNKCTYLRK--LKQGRAIHAH-IQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
             D+VSW+ LI  Y+  G +SE + L+ KML  G     PN+FT S+LLK      S  H
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ---PNEFTLSSLLKASGTGPSDHH 224

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           G Q+H   +K+GYD        + VGS LL+MY +   +  A+ +F+ +
Sbjct: 225 GRQLHAFSLKYGYD------MNVHVGSSLLDMYARWAHMREAKVIFNSL 267



 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 48/155 (30%), Positives = 90/155 (58%)
 Frame = +2

Query: 188 HGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIGSY 367
           HG+  HA  +K G Y ++ +  + L++MYA+   ++ ++ +F+ +   ++VSW+ALI  +
Sbjct: 224 HGRQLHAFSLKYG-YDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGH 282

Query: 368 AHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMKFGYD 547
           A  G     M L+ +ML +G     P  FT+S++   CA++ S+E G  +H  ++K G  
Sbjct: 283 ARKGEGEHVMRLFLQMLRQGFE---PTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQ 339

Query: 548 PMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           P+       ++G+ L++MY K G I  A++VF ++
Sbjct: 340 PI------AYIGNTLIDMYAKSGSIKDAKKVFRRL 368



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 44/130 (33%), Positives = 80/130 (61%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           + + C ++ S  +  G+  HAH IKSG   +  Y  N LI+MYAK   +K +++VF  + 
Sbjct: 313 VFTACASSGS--LEQGKWVHAHVIKSGGQPIA-YIGNTLIDMYAKSGSIKDAKKVFRRLV 369

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
           + DIVSW+++I  YA  G  +E + L+++ML    +++ PN+ TF ++L  C+++  ++ 
Sbjct: 370 KQDIVSWNSIISGYAQHGLGAEALQLFEQMLK---AKVQPNEITFLSVLTACSHSGLLDE 426

Query: 506 GMQIHTQIMK 535
           G Q + ++MK
Sbjct: 427 G-QYYFELMK 435


>ref|XP_006299919.1| hypothetical protein CARUB_v10016128mg [Capsella rubella]
           gi|482568628|gb|EOA32817.1| hypothetical protein
           CARUB_v10016128mg [Capsella rubella]
          Length = 634

 Score =  111 bits (277), Expect = 2e-22
 Identities = 62/155 (40%), Positives = 90/155 (58%)
 Frame = +2

Query: 182 ISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIG 361
           +  GQ  HAH IK+  Y    Y    L+  Y K   L+ +R+V DEM E ++VSW+A+I 
Sbjct: 74  LRQGQRVHAHMIKT-CYLPATYLRTRLLIFYGKCDRLEDARKVLDEMPEKNVVSWTAMIS 132

Query: 362 SYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMKFG 541
            Y+  G+SSE + ++ +M+    S   PN+FTF+  L  C  A  +  G QIH  ++K+ 
Sbjct: 133 RYSQTGHSSEALSVFAEMMR---SDGKPNEFTFATALTSCTRASGLALGKQIHGLLVKWS 189

Query: 542 YDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFD 646
           YD      S +FVGS LL+MY K G+I  AR++FD
Sbjct: 190 YD------SHIFVGSSLLDMYAKAGQIVEAREIFD 218



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 51/168 (30%), Positives = 95/168 (56%)
 Frame = +2

Query: 149 LSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQE 328
           L+ CT  +   +  G+  H   +K  +Y    +  + L++MYAK   +  +R++FD + E
Sbjct: 166 LTSCTRASGLAL--GKQIHGLLVK-WSYDSHIFVGSSLLDMYAKAGQIVEAREIFDCLPE 222

Query: 329 PDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHG 508
            D+VS +A+I  YA +G   E ++ ++++LS+G++   PN  T+++LL   +    ++HG
Sbjct: 223 RDVVSCTAIIAGYAQLGLDEEALETFQRLLSEGMT---PNYVTYASLLTALSGLALIDHG 279

Query: 509 MQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
            Q H  +++      L F + L   + L++MY KCG +  AR++FD M
Sbjct: 280 KQAHCHVLR----RELPFYAVL--QNSLIDMYSKCGNLSYARRLFDNM 321



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
 Frame = +2

Query: 182 ISHGQASHAHFIKSGAYSLDNYHC--NYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSAL 355
           I HG+ +H H ++     L  Y    N LI+MY+K   L  +R++FD M E   VSW+A+
Sbjct: 276 IDHGKQAHCHVLRR---ELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMLERTSVSWNAM 332

Query: 356 IGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIM- 532
           +  Y+  G   E ++L++ M  +   ++ P+  T   +L GC++    + G+ I   ++ 
Sbjct: 333 LVGYSKHGLGGEVLELFRLMRDE--KRVKPDAVTLLAVLSGCSHGRMEDTGLSIFEGMIA 390

Query: 533 -KFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
             +G  P  +   C      +++M G+ G I  A +   +M
Sbjct: 391 GDYGIKPDTEHYGC------IVDMLGRSGRIDEAFEFIKRM 425


>ref|XP_004234765.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Solanum lycopersicum]
          Length = 499

 Score =  111 bits (277), Expect = 2e-22
 Identities = 66/169 (39%), Positives = 97/169 (57%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +L++C    +  I  GQ  HAH IKS  Y    Y    LI  Y K  LL  +R VFDEM 
Sbjct: 43  VLNECINQRA--IREGQRVHAHMIKSH-YQPPVYLRTRLIVFYIKCGLLGDARWVFDEMP 99

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
           + ++VSW+ALI  Y+  G+ SE + L+ +ML+ G +   PN+FTF+ +L  C +A   + 
Sbjct: 100 QRNVVSWTALISGYSQTGDISEAIHLFLQMLTSGTA---PNEFTFATVLTSCTSAIGFQF 156

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           G QIH  ++K        F S ++VGS LL+MY K G++  AR +F+ +
Sbjct: 157 GRQIHCLLVK------SPFESHVYVGSSLLDMYAKAGKVHEARYIFENL 199



 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 48/169 (28%), Positives = 90/169 (53%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +L+ CT+        G+  H   +KS  +    Y  + L++MYAK   +  +R +F+ + 
Sbjct: 144 VLTSCTSAIG--FQFGRQIHCLLVKS-PFESHVYVGSSLLDMYAKAGKVHEARYIFENLP 200

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
           E D+VS +A+I  YA  G   E +DL++K   + +S    N  T++++L   +   +VE 
Sbjct: 201 ERDVVSCTAIISGYAQQGLYEEALDLFRKFQVERMSF---NYVTYTSVLTALSGLAAVEE 257

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           G Q+H +I++      L+      + + L++MY KCG+   +R +F++M
Sbjct: 258 GRQLHARIIR------LELPFYAVLHNSLIDMYSKCGKFTYSRMIFNQM 300



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 38/157 (24%), Positives = 74/157 (47%)
 Frame = +2

Query: 182 ISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIG 361
           +  G+  HA  I+         H N LI+MY+K      SR +F++M E  + SW+A++ 
Sbjct: 255 VEEGRQLHARIIRLELPFYAVLH-NSLIDMYSKCGKFTYSRMIFNQMSERTVSSWNAMLI 313

Query: 362 SYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMKFG 541
            Y+  G   E +DL++ M  +   +I P++ T   +L  C++    + G++I   +    
Sbjct: 314 GYSKHGMGKEVVDLFEMMREE--DKIKPDEITLLAVLSSCSHGGMEDKGVEIFNDLCSGK 371

Query: 542 YDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
               +    C      ++++  + G++ RA Q   +M
Sbjct: 372 ERVEVSIEHC----GCVVDLLSRSGQVERAFQFIKEM 404


>gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  110 bits (276), Expect = 3e-22
 Identities = 58/171 (33%), Positives = 100/171 (58%)
 Frame = +2

Query: 140 VDILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDE 319
           + ILS C +  +  +  G+  H+   K+G Y  D      LINMY K   L+++R+VF+E
Sbjct: 205 ISILSACQSPIA--LEFGEQIHSRIAKAG-YESDVNVSTALINMYCKCGSLELARKVFNE 261

Query: 320 MQEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSV 499
           M+E ++VSW+A+I  Y   G+S E + L++K++  G+    PN+ +F+++L  C N + +
Sbjct: 262 MRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQ---PNKVSFASILGACTNPNDL 318

Query: 500 EHGMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
             G+++H  I + G +        + VG+ L+ MY +CG +  ARQVFD +
Sbjct: 319 GEGLKLHAYIKQAGLEQE------VLVGNALISMYSRCGSLANARQVFDNL 363



 Score =  105 bits (263), Expect = 9e-21
 Identities = 62/168 (36%), Positives = 97/168 (57%)
 Frame = +2

Query: 149 LSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQE 328
           L +C    S  ++ G+  H H ++S  +  D Y  N LI+MY+K   ++ +  VF  M++
Sbjct: 107 LQQCVLAKS--LAEGKKVHDH-MRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMED 163

Query: 329 PDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHG 508
            D+VSW+A+I  YA  G   E  DL+ +M  +GL    PNQ TF ++L  C +  ++E G
Sbjct: 164 KDVVSWNAMISGYALHGRDQEAADLFYQMQREGLK---PNQNTFISILSACQSPIALEFG 220

Query: 509 MQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
            QIH++I K GY+      S + V + L+ MY KCG +  AR+VF++M
Sbjct: 221 EQIHSRIAKAGYE------SDVNVSTALINMYCKCGSLELARKVFNEM 262



 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 51/146 (34%), Positives = 84/146 (57%)
 Frame = +2

Query: 215  IKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIGSYAHMGNSSET 394
            ++ G +  D      LI MY+K   L+ +  VF  +QE D+V W+A++ +YAH     + 
Sbjct: 630  VEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDA 689

Query: 395  MDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMKFGYDPMLDFRSCL 574
            + L+++M  +G++   P+  T+S  L  CA   +VEHG +IH Q+ + G +   D R   
Sbjct: 690  LKLFQQMQLEGVN---PDSSTYSTALNACARLTAVEHGKKIHAQLKEAGME--TDTR--- 741

Query: 575  FVGSGLLEMYGKCGEIFRARQVFDKM 652
             V + L+EMY +CG +  A+QVF+KM
Sbjct: 742  -VSNSLIEMYSRCGCLCSAKQVFEKM 766



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 55/169 (32%), Positives = 89/169 (52%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           IL  CT      +  G   HA +IK      +    N LI+MY++   L  +RQVFD ++
Sbjct: 308 ILGACTNPND--LGEGLKLHA-YIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLR 364

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
             +  +W+A+I  Y   G   E   L++ M  KG     P++FT+++LL  CA+   ++ 
Sbjct: 365 SLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQ---PDKFTYASLLAICADRADLDR 420

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           G ++H+QI   G+      ++ L V + L+ MY KCG    AR+VF++M
Sbjct: 421 GKELHSQIASTGW------QTDLTVATALISMYAKCGSPEEARKVFNQM 463



 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 51/168 (30%), Positives = 88/168 (52%)
 Frame = +2

Query: 140 VDILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDE 319
           + +L+ CT+     +  G+  H    + G  S +N+  N LI+MY +   L  +R+VF  
Sbjct: 507 ITLLNSCTSPED--LERGRYIHGKINQWGMLS-NNHVANALISMYGRCGNLADAREVFYR 563

Query: 320 MQEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSV 499
           ++  D+ SW+A+I +    G +    DL++K  S+G      +++TF N+L+  AN + +
Sbjct: 564 IRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGK---GDKYTFINVLRAVANLEDL 620

Query: 500 EHGMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVF 643
           + G  IH  + K G+    D R    V + L++MY KCG +  A  VF
Sbjct: 621 DAGRMIHGLVEKGGFGK--DIR----VLTTLIKMYSKCGSLRDAENVF 662



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 46/154 (29%), Positives = 76/154 (49%)
 Frame = +2

Query: 182 ISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIG 361
           +  G+  H+    +G +  D      LI+MYAK    + +R+VF++M E +++SW+A I 
Sbjct: 418 LDRGKELHSQIASTG-WQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFIS 476

Query: 362 SYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMKFG 541
                    E    +K+M       + P+  TF  LL  C + + +E G  IH +I ++G
Sbjct: 477 CCCRHDLGKEAFQAFKQMRR---DDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWG 533

Query: 542 YDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVF 643
                   S   V + L+ MYG+CG +  AR+VF
Sbjct: 534 ------MLSNNHVANALISMYGRCGNLADAREVF 561



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 39/120 (32%), Positives = 59/120 (49%)
 Frame = +2

Query: 176  TPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSAL 355
            T + HG+  HA  +K      D    N LI MY++   L  ++QVF++M   DI SW+AL
Sbjct: 719  TAVEHGKKIHAQ-LKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNAL 777

Query: 356  IGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMK 535
            I  Y   G  +  ++ Y+ ML    + I+PN+ TF+++L   A     E        I K
Sbjct: 778  IAGYCQNGQGNIALEYYELMLR---ASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKK 834


>ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328683|gb|EFH59102.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 627

 Score =  110 bits (276), Expect = 3e-22
 Identities = 65/173 (37%), Positives = 98/173 (56%)
 Frame = +2

Query: 128 YHLAVDILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQ 307
           +H    +L+ C    +  +  GQ  HAH IK+  Y    Y    L+  Y K   L+ +R+
Sbjct: 51  FHCYDALLNACLDKRA--LREGQRVHAHMIKT-RYLPATYLRTRLLIFYGKCDCLEDARK 107

Query: 308 VFDEMQEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCAN 487
           V DEM E ++VSW+A+I  Y+  G+SSE + ++ +M+    S   PN+FTF+ +L  C  
Sbjct: 108 VLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMR---SDGKPNEFTFATVLTSCIR 164

Query: 488 ADSVEHGMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFD 646
           A  +  G QIH  I+K+ YD      S +FVGS LL+MY K G+I  AR++F+
Sbjct: 165 ASGLALGKQIHGLIVKWNYD------SHIFVGSSLLDMYAKAGQIEEAREIFE 211



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 47/169 (27%), Positives = 94/169 (55%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +L+ C   +   +  G+  H   +K   Y    +  + L++MYAK   ++ +R++F+ + 
Sbjct: 158 VLTSCIRASGLAL--GKQIHGLIVKWN-YDSHIFVGSSLLDMYAKAGQIEEAREIFECLP 214

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
           E D+VS +A+I  YA +G   E +++++++ S+G+    PN  T+++LL   +    ++H
Sbjct: 215 ERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMR---PNYVTYASLLTALSGLALLDH 271

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           G Q H  +++      L F + L   + L++MY KCG +  A+++FD M
Sbjct: 272 GKQAHCHVLR----RELPFYAVL--QNSLIDMYSKCGNLSYAQRLFDNM 314



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 41/161 (25%), Positives = 82/161 (50%), Gaps = 4/161 (2%)
 Frame = +2

Query: 182 ISHGQASHAHFIKSGAYSLDNYHC--NYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSAL 355
           + HG+ +H H ++     L  Y    N LI+MY+K   L  ++++FD M E   +SW+A+
Sbjct: 269 LDHGKQAHCHVLRR---ELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAM 325

Query: 356 IGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIM- 532
           +  Y+  G   E ++L++ M  +   ++ P+  T   +L GC++    + G+ I+  ++ 
Sbjct: 326 LVGYSKHGLGREVLELFRLMRDE--KRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVA 383

Query: 533 -KFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
            ++G  P  +   C      +++M G+ G I  A +   +M
Sbjct: 384 GEYGIKPDTEHYGC------IVDMLGRAGRIDEAFEFIKRM 418


>gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis]
          Length = 750

 Score =  110 bits (275), Expect = 4e-22
 Identities = 64/167 (38%), Positives = 95/167 (56%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQ 325
           +L +CT      +  G+  HAHF+ S  +  D    N ++NMYAK   L  +R++FDEM 
Sbjct: 82  LLKRCTEMRK--LREGKMVHAHFLNS-QFRDDPVIGNTILNMYAKCGSLADARKLFDEMP 138

Query: 326 EPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEH 505
             DIV+W+ALI  Y+    + E + L+  ML +GL    PNQFT S+LLK   +  + + 
Sbjct: 139 LKDIVTWTALISGYSQHDQAEEALALFPLMLRRGLE---PNQFTLSSLLKASGDGTTNKR 195

Query: 506 GMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFD 646
           G Q+H   +K GYD      S ++VGS L++MY + G +  AR +FD
Sbjct: 196 GRQLHAYCLKCGYD------SDVYVGSSLVDMYARYGHLVEARLIFD 236



 Score =  100 bits (250), Expect = 3e-19
 Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 1/168 (0%)
 Frame = +2

Query: 152 SKCTTTTST-PISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQE 328
           S CT   ST  +  G+  HA  IKSG   L  +  N L++MYAK   ++ +++VFD + +
Sbjct: 283 SLCTACASTGSLEQGKWVHAQVIKSGG-RLVAFVGNTLLDMYAKSGSIEDAKKVFDRLVK 341

Query: 329 PDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHG 508
            D+VSW++++  YA  G +   + L+  M  +      P  FT+S+L   CA+  S+E G
Sbjct: 342 RDVVSWNSMLNGYARKGETENALRLFSMMHREDFK---PTDFTYSSLCTACASTGSLEQG 398

Query: 509 MQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
             +H  ++K G       R   FVG+ LL+MY K G I  A++VFD++
Sbjct: 399 KWVHAHVIKSG------GRLVAFVGNTLLDMYAKSGSIEDAKKVFDRL 440



 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 56/159 (35%), Positives = 86/159 (54%)
 Frame = +2

Query: 176 TPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSAL 355
           T    G+  HA+ +K G Y  D Y  + L++MYA+   L  +R +FD +   + VSW+AL
Sbjct: 191 TTNKRGRQLHAYCLKCG-YDSDVYVGSSLVDMYARYGHLVEARLIFDGLVTKNEVSWNAL 249

Query: 356 IGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMK 535
           I  ++  G +   + L+  M  +      P  FTFS+L   CA+  S+E G  +H Q++K
Sbjct: 250 IAGHSRKGETENALRLFSMMHREDFK---PTHFTFSSLCTACASTGSLEQGKWVHAQVIK 306

Query: 536 FGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
            G       R   FVG+ LL+MY K G I  A++VFD++
Sbjct: 307 SG------GRLVAFVGNTLLDMYAKSGSIEDAKKVFDRL 339



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 42/134 (31%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
 Frame = +2

Query: 152 SKCTTTTST-PISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQE 328
           S CT   ST  +  G+  HAH IKSG   L  +  N L++MYAK   ++ +++VFD + +
Sbjct: 384 SLCTACASTGSLEQGKWVHAHVIKSGG-RLVAFVGNTLLDMYAKSGSIEDAKKVFDRLVK 442

Query: 329 PDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHG 508
            D+VSW++++  YA  G   +T+  +++M++ G+    P   TF ++L  C++A  ++ G
Sbjct: 443 RDVVSWNSMLRGYAQHGLGRKTVQHFEEMMTSGIE---PISVTFLSVLTACSHAGLLDEG 499

Query: 509 MQIHTQIMKFGYDP 550
                 + K+  +P
Sbjct: 500 RHYFELMKKYKVEP 513


>ref|XP_006407010.1| hypothetical protein EUTSA_v10022068mg [Eutrema salsugineum]
           gi|557108156|gb|ESQ48463.1| hypothetical protein
           EUTSA_v10022068mg [Eutrema salsugineum]
          Length = 689

 Score =  110 bits (274), Expect = 5e-22
 Identities = 62/171 (36%), Positives = 101/171 (59%)
 Frame = +2

Query: 140 VDILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDE 319
           V IL  CT    +    G   H   +KSG+  LD Y  NYLI+MY K +   ++ +VFD 
Sbjct: 10  VRILRVCTKNGLS--DQGGQVHGFLLKSGS-GLDMYMSNYLIDMYCKCREPFIAYKVFDN 66

Query: 320 MQEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSV 499
           M E ++VSW+AL+  + + G+ + ++ L+ +M  +G++   PN+FTFS  LK C   +++
Sbjct: 67  MPERNVVSWTALMSGHVYNGDLTGSLSLFTEMRRQGVN---PNEFTFSTNLKACGLLNAL 123

Query: 500 EHGMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
           E G+QIH   +K G++ M++      VG+ L+++Y KCG +  A +VF  M
Sbjct: 124 EKGLQIHGFCLKIGFEMMVE------VGNSLVDLYSKCGRVNEAEKVFHWM 168



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 38/133 (28%), Positives = 76/133 (57%)
 Frame = +2

Query: 254 NYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLS 433
           N L+++Y+K   +  + +VF  M +  ++SW+A+I  Y   G  S  +  ++ M    + 
Sbjct: 146 NSLVDLYSKCGRVNEAEKVFHWMVDKSLISWNAMIAGYVQAGYGSRALATFRMMQGTKIR 205

Query: 434 QIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMKFGYDPMLDFRSCLFVGSGLLEMYGKC 613
           + +P++FT ++LLK C++   ++ G QIH  +++ G+       S   +   L+++Y KC
Sbjct: 206 E-MPDEFTLTSLLKACSSIGMIQGGKQIHGFLIRSGF----PCSSSATITGSLVDLYVKC 260

Query: 614 GEIFRARQVFDKM 652
           G +F AR+ FD++
Sbjct: 261 GNLFGARKAFDQI 273



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 32/134 (23%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +2

Query: 254 NYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLS 433
           N +++MY K  L+  + + FDEMQ  D++SW+ +I  Y   G   + + ++ KML   + 
Sbjct: 352 NSVVDMYLKCGLVDEAEKCFDEMQSRDVISWTVMITGYGKHGLGKKAVCVFNKMLRHNIE 411

Query: 434 QIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMKF-GYDPMLDFRSCLFVGSGLLEMYGK 610
              P+   +  +L  C+++  V+ G ++ +++++  G  P ++  +C      ++++ G+
Sbjct: 412 ---PDDVCYLAVLSACSHSGLVKEGEELFSKLLETRGIKPRVEHYAC------VVDLLGR 462

Query: 611 CGEIFRARQVFDKM 652
            G +  A+ + D M
Sbjct: 463 AGRLKEAKHLIDTM 476



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
 Frame = +2

Query: 182 ISHGQASHAHFIKSG-AYSLDNYHCNYLINMYAKRKLLKVSRQVFDEMQEPDIVSWSALI 358
           I  G+  H   I+SG   S        L+++Y K   L  +R+ FD+++E  ++SWS+LI
Sbjct: 226 IQGGKQIHGFLIRSGFPCSSSATITGSLVDLYVKCGNLFGARKAFDQIKEKTMISWSSLI 285

Query: 359 GSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMKF 538
             YA  G+  E M L++++          + F  S+++   A+   +  G Q+    +K 
Sbjct: 286 LGYAQEGDFVEAMGLFRRLRELNSQ---TDSFVLSSIIGVFADFALLRQGKQMQALAVK- 341

Query: 539 GYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
                L       V + +++MY KCG +  A + FD+M
Sbjct: 342 -----LPSGLETSVSNSVVDMYLKCGLVDEAEKCFDEM 374


>gb|EMT11227.1| hypothetical protein F775_16951 [Aegilops tauschii]
          Length = 903

 Score =  110 bits (274), Expect = 5e-22
 Identities = 64/185 (34%), Positives = 107/185 (57%), Gaps = 14/185 (7%)
 Frame = +2

Query: 140 VDILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHC-----------NYLINMYAKRK 286
           + +LS C +  +   S G  +HA+ +K+   SLDN+             N LI+MY+K +
Sbjct: 416 ISVLSACASLGA--YSQGMETHAYSLKNRLLSLDNHFGGTGDEEDLMVHNALIDMYSKCR 473

Query: 287 LLKVSRQVFDEM--QEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTF 460
           + K +R +FD +  +E ++V+W+ +IG YA  G+S++ ++L+ +MLSK    + PN FT 
Sbjct: 474 IFKAARSIFDSIPRKERNVVTWTVMIGGYAQYGDSNDALELFSQMLSKP-HAVAPNAFTV 532

Query: 461 SNLLKGCANADSVEHGMQIHTQIMK-FGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRARQ 637
           S +L  CA+  ++  G QIH  +++   Y+      S  FV + L++MY KCG++  AR 
Sbjct: 533 SCILMACAHLSALRVGKQIHAYVVRQHQYE-----ASTYFVANCLIDMYSKCGDVDTARY 587

Query: 638 VFDKM 652
           VFD M
Sbjct: 588 VFDGM 592



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 41/212 (19%)
 Frame = +2

Query: 140 VDILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYHCNYLINMYAKRKLLKVSRQVFDE 319
           V+IL  C +  + P +  +  H + I+ G +  D +  N L+  YAK   +K + +VF+ 
Sbjct: 280 VNILPACASLKALPRT--REIHGNAIRHGTFP-DVFVGNALVGTYAKCGSMKDAVKVFNM 336

Query: 320 MQEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQII------------------- 442
           M+  D+VSW+A++  Y+  GN     +++K M  + +S  +                   
Sbjct: 337 MEIKDVVSWNAIVTGYSQSGNFEAAFEIFKNMRKENISADVVTWTAVIAGYAQRGCGQEA 396

Query: 443 -------------PNQFTFSNLLKGCANADSVEHGMQIHTQIMKFGYDPMLDF------- 562
                        PN  T  ++L  CA+  +   GM+ H   +K   + +L         
Sbjct: 397 LNVFRQMLFSGSEPNSITIISVLSACASLGAYSQGMETHAYSLK---NRLLSLDNHFGGT 453

Query: 563 --RSCLFVGSGLLEMYGKCGEIFRARQVFDKM 652
                L V + L++MY KC     AR +FD +
Sbjct: 454 GDEEDLMVHNALIDMYSKCRIFKAARSIFDSI 485



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
 Frame = +2

Query: 251 CNYLINMYAKRKLLKVSRQVFDEMQE---PDIVSWSALIGSYAHMGNSSETMDLYKKM-- 415
           CN L+ MYA+   LK + QVF E+ +    D++SW++++ ++    +    +D++ KM  
Sbjct: 204 CNALVAMYARCGSLKEASQVFQEIAQRGIDDVISWNSIVAAHVKHNSPWTALDMFSKMSM 263

Query: 416 -LSKGLSQIIPNQFTFSNLLKGCANADSVEHGMQIHTQIMKFGYDPMLDFRSCLFVGSGL 592
            + +  +    N  +  N+L  CA+  ++    +IH   ++ G  P +      FVG+ L
Sbjct: 264 IVHEKATNDRSNIISIVNILPACASLKALPRTREIHGNAIRHGTFPDV------FVGNAL 317

Query: 593 LEMYGKCGEIFRARQVFDKM 652
           +  Y KCG +  A +VF+ M
Sbjct: 318 VGTYAKCGSMKDAVKVFNMM 337



 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 38/164 (23%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
 Frame = +2

Query: 146 ILSKCTTTTSTPISHGQASHAHFIKSGAYSLDNYH-CNYLINMYAKRKLLKVSRQVFDEM 322
           IL  C   ++  +  G+  HA+ ++   Y    Y   N LI+MY+K   +  +R VFD M
Sbjct: 535 ILMACAHLSALRV--GKQIHAYVVRQHQYEASTYFVANCLIDMYSKCGDVDTARYVFDGM 592

Query: 323 QEPDIVSWSALIGSYAHMGNSSETMDLYKKMLSKGLSQIIPNQFTFSNLLKGCANADSVE 502
            + + +SW++++  Y   G  +E ++++ KM   G    +P+  +F  +L  C+++  ++
Sbjct: 593 SQRNDISWTSMMAGYGMHGRGNEALEIFDKMQMAG---FVPDDISFLVVLYACSHSRMID 649

Query: 503 HGMQIHTQIMK-FGYDPMLDFRSCLFVGSGLLEMYGKCGEIFRA 631
            G+     + + +G     +  +C      ++++  + G+I RA
Sbjct: 650 RGLDYFDSMSRDYGVAAGAEHYAC------VIDLLARSGQIDRA 687