BLASTX nr result
ID: Ephedra25_contig00029159
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00029159
(530 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006339883.1| PREDICTED: DNA polymerase alpha catalytic su... 58 7e-10
gb|ESW28786.1| hypothetical protein PHAVU_002G017900g [Phaseolus... 55 2e-09
ref|XP_006847112.1| hypothetical protein AMTR_s00017p00221560 [A... 53 9e-09
ref|XP_002310719.2| hypothetical protein POPTR_0007s10880g [Popu... 65 1e-08
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta... 61 2e-07
ref|XP_004166155.1| PREDICTED: DNA polymerase alpha catalytic su... 60 4e-07
ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic su... 60 4e-07
ref|NP_001266164.1| DNA polymerase alpha catalytic subunit [Sola... 60 4e-07
ref|XP_006466591.1| PREDICTED: DNA polymerase alpha catalytic su... 59 7e-07
ref|XP_006425916.1| hypothetical protein CICLE_v10024699mg [Citr... 59 7e-07
gb|EOX91458.1| DNA polymerase alpha catalytic subunit isoform 4 ... 59 7e-07
gb|EOX91457.1| DNA polymerase isoform 3 [Theobroma cacao] 59 7e-07
gb|EOX91455.1| DNA polymerase alpha catalytic subunit isoform 1 ... 59 7e-07
gb|EXB54380.1| DNA polymerase alpha catalytic subunit [Morus not... 58 1e-06
gb|EMT15233.1| DNA polymerase alpha catalytic subunit [Aegilops ... 58 1e-06
ref|XP_004511916.1| PREDICTED: DNA polymerase alpha catalytic su... 56 4e-06
sp|O48653.2|DPOLA_ORYSJ RecName: Full=DNA polymerase alpha catal... 56 4e-06
dbj|BAA24573.1| DNA polymerase alpha catalytic subunit [Oryza sa... 56 4e-06
emb|CBH32591.1| unnamed protein product [Triticum aestivum] 56 4e-06
emb|CBH32589.1| DNA polymerase alpha catalytic subunit,putative,... 56 4e-06
>ref|XP_006339883.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Solanum
tuberosum]
Length = 1560
Score = 58.2 bits (139), Expect(2) = 7e-10
Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTI------VNEIVCVPIICC 111
+VSWCKFE+ V S KDI++ + EIP V+V INLKTI +NEIV +ICC
Sbjct: 561 RVSWCKFEVIVDSPKDIQISTSSKNVAEIPPVVVTAINLKTIINQKQNINEIVSASVICC 620
Score = 30.8 bits (68), Expect(2) = 7e-10
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -3
Query: 465 NNSALEFLLIKRKIRGATWLLTFKATYSQN 376
++SA+E LIKRKI+G +WL K + N
Sbjct: 529 HSSAMELFLIKRKIKGPSWLSISKFSSCPN 558
>gb|ESW28786.1| hypothetical protein PHAVU_002G017900g [Phaseolus vulgaris]
Length = 1540
Score = 54.7 bits (130), Expect(2) = 2e-09
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTI------VNEIVCVPIICC 111
+VSWCKFE+ V S K+I+ +P +IP V+VA INLKT +NEIV I+ C
Sbjct: 541 RVSWCKFEVTVDSPKNIRTSAPSKITSKIPPVVVAAINLKTTLNEKQNINEIVSASIVSC 600
Query: 110 QV 105
+
Sbjct: 601 NM 602
Score = 32.7 bits (73), Expect(2) = 2e-09
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -3
Query: 459 SALEFLLIKRKIRGATWLLTFKATYSQNS 373
SALE LIKRKI+G +WL K S +S
Sbjct: 511 SALELFLIKRKIKGPSWLQVSKFATSSSS 539
>ref|XP_006847112.1| hypothetical protein AMTR_s00017p00221560 [Amborella trichopoda]
gi|548850141|gb|ERN08693.1| hypothetical protein
AMTR_s00017p00221560 [Amborella trichopoda]
Length = 1706
Score = 53.1 bits (126), Expect(2) = 9e-09
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Frame = -1
Query: 278 IMQVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTIV------NEIVCVPII 117
+ +VSWCK E+ V KD+ + + EIP V A INLKT++ NE+VC I+
Sbjct: 553 LQRVSWCKMEVVVDCPKDVNIATSSGAAREIPTVTTAAINLKTVINQQKNMNEVVCASIV 612
Query: 116 C 114
C
Sbjct: 613 C 613
Score = 32.0 bits (71), Expect(2) = 9e-09
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 465 NNSALEFLLIKRKIRGATWLLTFK 394
N SALE L+KRKI+G WL K
Sbjct: 523 NTSALELFLVKRKIKGPCWLTISK 546
>ref|XP_002310719.2| hypothetical protein POPTR_0007s10880g [Populus trichocarpa]
gi|550334610|gb|EEE91169.2| hypothetical protein
POPTR_0007s10880g [Populus trichocarpa]
Length = 1536
Score = 64.7 bits (156), Expect = 1e-08
Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 6/60 (10%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTI------VNEIVCVPIICC 111
+VSWCKFE+ V S K+I+V S N LEIP V+VA INLKT+ VNEIV +ICC
Sbjct: 535 KVSWCKFEIIVESPKEIQVSSSSNSKLEIPPVVVAAINLKTVINEKQNVNEIVSASVICC 594
>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
gi|223537171|gb|EEF38804.1| DNA polymerase alpha
catalytic subunit, putative [Ricinus communis]
Length = 1526
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTI------VNEIVCVPIICC 111
+VSWCKFE+ S KDI+V S +EIP V+V INLKTI VNEIV +ICC
Sbjct: 525 RVSWCKFEITADSPKDIRVSSSSKNTIEIPPVVVTAINLKTIINEKQNVNEIVSASLICC 584
>ref|XP_004166155.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
[Cucumis sativus]
Length = 1027
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTI------VNEIVCVPIICC 111
+VSWCKFE+ V S KD++ + + LEIP ++V IN+KTI VNEIV +ICC
Sbjct: 30 RVSWCKFEVIVDSPKDVQTSTSSSKNLEIPPMIVTAINIKTIINERQSVNEIVSASVICC 89
Query: 110 Q 108
Q
Sbjct: 90 Q 90
>ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cucumis
sativus]
Length = 1547
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTI------VNEIVCVPIICC 111
+VSWCKFE+ V S KD++ + + LEIP ++V IN+KTI VNEIV +ICC
Sbjct: 550 RVSWCKFEVIVDSPKDVQTSTSSSKNLEIPPMIVTAINIKTIINERQSVNEIVSASVICC 609
Query: 110 Q 108
Q
Sbjct: 610 Q 610
>ref|NP_001266164.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
gi|380710181|gb|AFD98849.1| DNA polymerase alpha
catalytic subunit [Solanum lycopersicum]
Length = 1561
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTI------VNEIVCVPIICC 111
+VSWCKFE+ V S KDIK+ + EIP V+V INLKTI +NEIV +ICC
Sbjct: 562 RVSWCKFEVIVDSPKDIKISTSSKNVAEIPPVVVTAINLKTIINQKQNINEIVSASVICC 621
>ref|XP_006466591.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Citrus
sinensis]
Length = 1517
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTI------VNEIVCVPIICC 111
+VSWCK+E+ V S KDI+V S E+P V V INLKT+ VNEIV ++CC
Sbjct: 521 RVSWCKYEITVDSPKDIRVSSSSKHVAEVPPVTVTAINLKTVFNKRQDVNEIVSASVVCC 580
>ref|XP_006425916.1| hypothetical protein CICLE_v10024699mg [Citrus clementina]
gi|557527906|gb|ESR39156.1| hypothetical protein
CICLE_v10024699mg [Citrus clementina]
Length = 1513
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTI------VNEIVCVPIICC 111
+VSWCK+E+ V S KDI+V S E+P V V INLKT+ VNEIV ++CC
Sbjct: 517 RVSWCKYEITVDSPKDIRVSSSSKHVAEVPPVTVTAINLKTVFNKRQDVNEIVSASVVCC 576
>gb|EOX91458.1| DNA polymerase alpha catalytic subunit isoform 4 [Theobroma cacao]
Length = 1445
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTI------VNEIVCVPIICC 111
++SWCK+E+ + S KDI++ S EIP ++V+ INLKTI +NE+V IICC
Sbjct: 539 RISWCKYEVIIDSPKDIRISSSSKSTTEIPPIVVSAINLKTIINGRLNINEVVSASIICC 598
Query: 110 Q 108
+
Sbjct: 599 R 599
>gb|EOX91457.1| DNA polymerase isoform 3 [Theobroma cacao]
Length = 1382
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTI------VNEIVCVPIICC 111
++SWCK+E+ + S KDI++ S EIP ++V+ INLKTI +NE+V IICC
Sbjct: 384 RISWCKYEVIIDSPKDIRISSSSKSTTEIPPIVVSAINLKTIINGRLNINEVVSASIICC 443
Query: 110 Q 108
+
Sbjct: 444 R 444
>gb|EOX91455.1| DNA polymerase alpha catalytic subunit isoform 1 [Theobroma cacao]
gi|508699560|gb|EOX91456.1| DNA polymerase alpha
catalytic subunit isoform 1 [Theobroma cacao]
Length = 1537
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTI------VNEIVCVPIICC 111
++SWCK+E+ + S KDI++ S EIP ++V+ INLKTI +NE+V IICC
Sbjct: 539 RISWCKYEVIIDSPKDIRISSSSKSTTEIPPIVVSAINLKTIINGRLNINEVVSASIICC 598
Query: 110 Q 108
+
Sbjct: 599 R 599
>gb|EXB54380.1| DNA polymerase alpha catalytic subunit [Morus notabilis]
Length = 1551
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTI------VNEIVCVPIICC 111
+VSWCKFE+ V KDI V + ++IP V+VA INLKTI VNEIV +ICC
Sbjct: 514 RVSWCKFEVIVDFPKDIGVSTSSKISVDIPPVVVAAINLKTIINEKQTVNEIVSASVICC 573
>gb|EMT15233.1| DNA polymerase alpha catalytic subunit [Aegilops tauschii]
Length = 1328
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTIVN------EIVCVPIICC 111
+VSWCKFE+ V S KDI V N LE+P V+VA +NLKTI+N EIV +ICC
Sbjct: 346 RVSWCKFEVTVDSPKDISVLMTSN-TLEVPPVVVAAVNLKTIINEKHNVHEIVSASVICC 404
>ref|XP_004511916.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cicer
arietinum]
Length = 1532
Score = 56.2 bits (134), Expect = 4e-06
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 8/64 (12%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPL--EIPKVLVAVINLKTI------VNEIVCVPII 117
+VSWCKFE+ V S KDI+V S + + EIP V+V INLKT +NEIV ++
Sbjct: 531 RVSWCKFEVTVDSPKDIRVSSSSSSKITREIPSVVVTAINLKTTINEKQNINEIVSASVV 590
Query: 116 CCQV 105
CC +
Sbjct: 591 CCNM 594
>sp|O48653.2|DPOLA_ORYSJ RecName: Full=DNA polymerase alpha catalytic subunit
Length = 1534
Score = 56.2 bits (134), Expect = 4e-06
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTIVN------EIVCVPIICC 111
+VSWCKFE+ V S KDI V + LE+P V+VA +NLKTI+N EIV +ICC
Sbjct: 539 RVSWCKFEVTVDSPKDISV-LMTSTTLEVPPVVVAAVNLKTIINEKHNVHEIVSASVICC 597
>dbj|BAA24573.1| DNA polymerase alpha catalytic subunit [Oryza sativa]
Length = 1243
Score = 56.2 bits (134), Expect = 4e-06
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTIVN------EIVCVPIICC 111
+VSWCKFE+ V S KDI V + LE+P V+VA +NLKTI+N EIV +ICC
Sbjct: 243 RVSWCKFEVTVDSPKDISV-LMTSTTLEVPPVVVAAVNLKTIINEKHNVHEIVSASVICC 301
>emb|CBH32591.1| unnamed protein product [Triticum aestivum]
Length = 1016
Score = 56.2 bits (134), Expect = 4e-06
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTIVN------EIVCVPIICC 111
+VSWCKFE+ V S KDI V + LE+P V+VA +NLKTI+N EIV +ICC
Sbjct: 569 RVSWCKFEVTVDSPKDISV-LMTSTTLEVPPVVVAAVNLKTIINEKHNVHEIVSASVICC 627
>emb|CBH32589.1| DNA polymerase alpha catalytic subunit,putative,expressed [Triticum
aestivum]
Length = 1516
Score = 56.2 bits (134), Expect = 4e-06
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Frame = -1
Query: 272 QVSWCKFELHVGSIKDIKVGSPRNFPLEIPKVLVAVINLKTIVN------EIVCVPIICC 111
+VSWCKFE+ V S KDI V + LE+P V+VA +NLKTI+N EIV +ICC
Sbjct: 523 RVSWCKFEVTVDSPKDISV-LMTSTTLEVPPVVVAAVNLKTIINEKHNVHEIVSASVICC 581