BLASTX nr result
ID: Ephedra25_contig00029151
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00029151
(600 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006646734.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
gb|EXC12608.1| hypothetical protein L484_012985 [Morus notabilis] 57 3e-06
ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
gb|EOY21825.1| Pentatricopeptide repeat-containing protein, puta... 57 4e-06
dbj|BAC79788.1| putative pentatricopeptide (PPR) repeat-containi... 56 6e-06
ref|NP_001175099.1| Os07g0203900 [Oryza sativa Japonica Group] g... 56 6e-06
gb|EEE66768.1| hypothetical protein OsJ_23489 [Oryza sativa Japo... 56 6e-06
gb|EEC81704.1| hypothetical protein OsI_25308 [Oryza sativa Indi... 56 6e-06
gb|EEC72251.1| hypothetical protein OsI_05387 [Oryza sativa Indi... 56 6e-06
dbj|BAD87363.1| pentatricopeptide (PPR) repeat-containing protei... 56 6e-06
>ref|XP_006646734.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Oryza brachyantha]
Length = 569
Score = 57.8 bits (138), Expect = 2e-06
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 299 KAFMDFIKVWKEGTQPEAVM--PMRNAISKCSGHKQGTQIHALAIKSHLCLHKYVDIGTS 472
+AF F+++ + GT + + I S +G Q+H L +K + + VD+ S
Sbjct: 301 EAFQQFLEMRRHGTDMDVFTFASVLKGIGSSSSLLEGRQVHTLIMK--IGYYSVVDVQNS 358
Query: 473 LIAMYARHGTIHEIHKVFSEILYPDTFSWTSTIHAHVQRRH 595
LI+MYARHG I E + VF + P+ SW S + Q H
Sbjct: 359 LISMYARHGAIEESNSVFISMESPNVVSWNSLMSGCAQHGH 399
>gb|EXC12608.1| hypothetical protein L484_012985 [Morus notabilis]
Length = 737
Score = 57.4 bits (137), Expect = 3e-06
Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Frame = +2
Query: 215 ETFTTKLQTLNKLDIEQNTKXXXXXXXXKAFMDFIKVWKE---GTQPEAV-MPMRNAISK 382
ETFT +L LN+ E N K + D +K++ + +P A + NAI+
Sbjct: 15 ETFTEQLLRLNQRLSELNRS--------KRYSDSLKLFGQFHSSQRPRADHYTLSNAITA 66
Query: 383 CSGHKQ---GTQIHALAIKSHLCLHKYVDIGTSLIAMYARHGTIHEIHKVFSEILYPDTF 553
C+ + G QIHA A+++ L Y + +L+++YA+ G + + +VF EI PD +
Sbjct: 67 CANLRDVVSGAQIHAHAVRAGL--KAYPHVFNTLLSLYAKAGDLRSVKRVFGEIESPDVY 124
Query: 554 SWTSTIHAHVQ 586
SWT+ + A V+
Sbjct: 125 SWTTLLSACVK 135
>ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product
[Vitis vinifera]
Length = 893
Score = 57.4 bits (137), Expect = 3e-06
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +2
Query: 401 GTQIHALAIKSHLCLHKYVDIGTSLIAMYARHGTIHEIHKVFSEILYPDTFSWTSTIHAH 580
GTQ+HA K + L+ V +G+SL+ MY++ G+I E HKVF +I PD SWT+ I ++
Sbjct: 669 GTQLHACVTK--MGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSY 726
Query: 581 VQ 586
Q
Sbjct: 727 AQ 728
>gb|EOY21825.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao] gi|508774570|gb|EOY21826.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao]
Length = 894
Score = 57.0 bits (136), Expect = 4e-06
Identities = 32/73 (43%), Positives = 45/73 (61%)
Frame = +2
Query: 368 NAISKCSGHKQGTQIHALAIKSHLCLHKYVDIGTSLIAMYARHGTIHEIHKVFSEILYPD 547
+A+S SG GTQ+HAL IK L L V +G+SL+ MY++ G+I + K F EI PD
Sbjct: 661 SALSNKSG--VGTQLHALVIK--LGLDSEVSVGSSLVTMYSKCGSIRDSEKAFDEIDKPD 716
Query: 548 TFSWTSTIHAHVQ 586
WT+ I ++ Q
Sbjct: 717 LIGWTAMISSYAQ 729
>dbj|BAC79788.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 749
Score = 56.2 bits (134), Expect = 6e-06
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 299 KAFMDFIKVWKEGTQPEAVM--PMRNAISKCSGHKQGTQIHALAIKSHLCLHKYVDIGTS 472
+AF F+++ + GT + + AI S +G Q+H L +K + VD+ S
Sbjct: 345 EAFQHFLEMRRHGTDMDVFTFASVLKAIGSSSSLLEGRQVHTLILK--IGYDSVVDVQNS 402
Query: 473 LIAMYARHGTIHEIHKVFSEILYPDTFSWTSTIHAHVQRRH 595
LI+MYARHG I E + VF + P+ SW S + Q H
Sbjct: 403 LISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGH 443
>ref|NP_001175099.1| Os07g0203900 [Oryza sativa Japonica Group]
gi|255677594|dbj|BAH93827.1| Os07g0203900 [Oryza sativa
Japonica Group]
Length = 721
Score = 56.2 bits (134), Expect = 6e-06
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 299 KAFMDFIKVWKEGTQPEAVM--PMRNAISKCSGHKQGTQIHALAIKSHLCLHKYVDIGTS 472
+AF F+++ + GT + + AI S +G Q+H L +K + VD+ S
Sbjct: 300 EAFQHFLEMRRHGTDMDVFTFASVLKAIGSSSSLLEGRQVHTLILK--IGYDSVVDVQNS 357
Query: 473 LIAMYARHGTIHEIHKVFSEILYPDTFSWTSTIHAHVQRRH 595
LI+MYARHG I E + VF + P+ SW S + Q H
Sbjct: 358 LISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGH 398
>gb|EEE66768.1| hypothetical protein OsJ_23489 [Oryza sativa Japonica Group]
Length = 691
Score = 56.2 bits (134), Expect = 6e-06
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 299 KAFMDFIKVWKEGTQPEAVM--PMRNAISKCSGHKQGTQIHALAIKSHLCLHKYVDIGTS 472
+AF F+++ + GT + + AI S +G Q+H L +K + VD+ S
Sbjct: 270 EAFQHFLEMRRHGTDMDVFTFASVLKAIGSSSSLLEGRQVHTLILK--IGYDSVVDVQNS 327
Query: 473 LIAMYARHGTIHEIHKVFSEILYPDTFSWTSTIHAHVQRRH 595
LI+MYARHG I E + VF + P+ SW S + Q H
Sbjct: 328 LISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGH 368
>gb|EEC81704.1| hypothetical protein OsI_25308 [Oryza sativa Indica Group]
Length = 749
Score = 56.2 bits (134), Expect = 6e-06
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 299 KAFMDFIKVWKEGTQPEAVM--PMRNAISKCSGHKQGTQIHALAIKSHLCLHKYVDIGTS 472
+AF F+++ + GT + + AI S +G Q+H L +K + VD+ S
Sbjct: 345 EAFQHFLEMRRHGTDMDVFTFASVLKAIGSSSSLLEGRQVHTLILK--IGYDSVVDVQNS 402
Query: 473 LIAMYARHGTIHEIHKVFSEILYPDTFSWTSTIHAHVQRRH 595
LI+MYARHG I E + VF + P+ SW S + Q H
Sbjct: 403 LISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGH 443
>gb|EEC72251.1| hypothetical protein OsI_05387 [Oryza sativa Indica Group]
Length = 566
Score = 56.2 bits (134), Expect = 6e-06
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 299 KAFMDFIKVWKEGTQPEAVM--PMRNAISKCSGHKQGTQIHALAIKSHLCLHKYVDIGTS 472
+AF F+++ + GT + + AI S +G Q+H L +K + VD+ S
Sbjct: 298 EAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSLLEGRQVHTLILK--IGYDSVVDVQNS 355
Query: 473 LIAMYARHGTIHEIHKVFSEILYPDTFSWTSTIHAHVQRRH 595
LI+MYARHG I E + VF + P+ SW S + Q H
Sbjct: 356 LISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGH 396
>dbj|BAD87363.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group] gi|222619954|gb|EEE56086.1|
hypothetical protein OsJ_04925 [Oryza sativa Japonica
Group]
Length = 566
Score = 56.2 bits (134), Expect = 6e-06
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +2
Query: 299 KAFMDFIKVWKEGTQPEAVM--PMRNAISKCSGHKQGTQIHALAIKSHLCLHKYVDIGTS 472
+AF F+++ + GT + + AI S +G Q+H L +K + VD+ S
Sbjct: 298 EAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSLLEGRQVHTLILK--IGYDSVVDVQNS 355
Query: 473 LIAMYARHGTIHEIHKVFSEILYPDTFSWTSTIHAHVQRRH 595
LI+MYARHG I E + VF + P+ SW S + Q H
Sbjct: 356 LISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGH 396