BLASTX nr result

ID: Ephedra25_contig00029025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00029025
         (564 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS74565.1| hypothetical protein M569_00187, partial [Genlise...    60   5e-07
ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containi...    60   5e-07
emb|CBI28421.3| unnamed protein product [Vitis vinifera]               60   5e-07
emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]    60   5e-07
ref|XP_006447755.1| hypothetical protein CICLE_v10014182mg [Citr...    57   2e-06

>gb|EPS74565.1| hypothetical protein M569_00187, partial [Genlisea aurea]
          Length = 860

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 30/112 (26%), Positives = 60/112 (53%)
 Frame = +2

Query: 227 WTNDTALKDTISKLNSKNIEEVLKGIDDPRAALNLFIWMNKMQRCSLSINCYIIMVNTLI 406
           W+  + LK  I KLN  +I E+L+  ++  +AL  F W++K+      ++CYI M+N L+
Sbjct: 20  WSRSSELKALIPKLNPSHIPEILETHENLDSALQFFYWLSKLNFYKHDMSCYIYMLNRLV 79

Query: 407 DGGLLYKAEEVSESMVMACRERSEIEKVLPAVDEFHNQGLKISLRAYGSLVL 562
            G     A+ V   M+ +C +  ++  V+  ++      L  +L ++ +L++
Sbjct: 80  AGKKFSSADHVRILMIKSCEDGGQMRAVVDHLNGICKFVLPFTLYSFNTLLI 131


>ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 7/168 (4%)
 Frame = +2

Query: 80  SPCSCKHRYNSSSPPALALVVRSTQNQLTTH-------NDINHTIKLVNEKLHKRNWTND 238
           SPC   H  N SS   L  +  S++  +++H             +  V   L +  W   
Sbjct: 7   SPCLV-HLQNHSS--VLGFLNFSSKPHISSHFAVPASREPFQAIVSRVCAILSRVQWKGS 63

Query: 239 TALKDTISKLNSKNIEEVLKGIDDPRAALNLFIWMNKMQRCSLSINCYIIMVNTLIDGGL 418
           + LK    +L + ++ E++    D  + +  F W++K      ++NC+I M+N L+   +
Sbjct: 64  SELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRV 123

Query: 419 LYKAEEVSESMVMACRERSEIEKVLPAVDEFHNQGLKISLRAYGSLVL 562
              A+ +   M+ ACR   EI +V   ++E    G   SL +  +L++
Sbjct: 124 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLI 171


>emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 7/168 (4%)
 Frame = +2

Query: 80  SPCSCKHRYNSSSPPALALVVRSTQNQLTTH-------NDINHTIKLVNEKLHKRNWTND 238
           SPC   H  N SS   L  +  S++  +++H             +  V   L +  W   
Sbjct: 7   SPCLV-HLQNHSS--VLGFLNFSSKPHISSHFAVPASREPFQAIVSRVCAILSRVQWKGS 63

Query: 239 TALKDTISKLNSKNIEEVLKGIDDPRAALNLFIWMNKMQRCSLSINCYIIMVNTLIDGGL 418
           + LK    +L + ++ E++    D  + +  F W++K      ++NC+I M+N L+   +
Sbjct: 64  SELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRV 123

Query: 419 LYKAEEVSESMVMACRERSEIEKVLPAVDEFHNQGLKISLRAYGSLVL 562
              A+ +   M+ ACR   EI +V   ++E    G   SL +  +L++
Sbjct: 124 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLI 171


>emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 7/168 (4%)
 Frame = +2

Query: 80  SPCSCKHRYNSSSPPALALVVRSTQNQLTTH-------NDINHTIKLVNEKLHKRNWTND 238
           SPC   H  N SS   L  +  S++  +++H             +  V   L +  W   
Sbjct: 49  SPCLV-HLQNHSS--VLGFLNFSSKPHISSHFAVPASREPFQAIVSRVCAILSRVQWKGS 105

Query: 239 TALKDTISKLNSKNIEEVLKGIDDPRAALNLFIWMNKMQRCSLSINCYIIMVNTLIDGGL 418
           + LK    +L + ++ E++    D  + +  F W++K      ++NC+I M+N L+   +
Sbjct: 106 SELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRV 165

Query: 419 LYKAEEVSESMVMACRERSEIEKVLPAVDEFHNQGLKISLRAYGSLVL 562
              A+ +   M+ ACR   EI +V   ++E    G   SL +  +L++
Sbjct: 166 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLI 213


>ref|XP_006447755.1| hypothetical protein CICLE_v10014182mg [Citrus clementina]
           gi|568830449|ref|XP_006469511.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g65560-like [Citrus sinensis]
           gi|557550366|gb|ESR60995.1| hypothetical protein
           CICLE_v10014182mg [Citrus clementina]
          Length = 929

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 1/151 (0%)
 Frame = +2

Query: 113 SSPPALALVVRSTQNQLTTHNDINHTIKLVNEKLHKRNWTNDTALKDTISKLNSKNIEEV 292
           S PP   L   S  N     +   + +  V E L    W  +  L    +KL   ++  +
Sbjct: 21  SLPPFNFLTFSSGPNHYLPRSQFPNLVTRVCEILSNLQWKKNPELNHLSAKLRPHHVSNI 80

Query: 293 LKGIDDPRAALNLFIWMNKMQRCSLSINCYIIMVNTLIDGGLLYKAEEVSESMVMACRER 472
           +    +    L  F W++K +     + C++ M+N L+       A+ V   M+ ACR  
Sbjct: 81  INTHQNTDVVLQFFYWISKRRFYKHDMGCFVSMLNRLVHDRNFDPADHVRILMIKACRNE 140

Query: 473 SEIEKVLPAVDEFH-NQGLKISLRAYGSLVL 562
            E+++V   + E + N G + +L ++ +L++
Sbjct: 141 EELKRVFEFLIELNGNAGFRFTLYSFNTLLI 171


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