BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00029009
         (522 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358965.1| PREDICTED: putative pentatricopeptide repeat...   114   1e-23
ref|XP_004252116.1| PREDICTED: putative pentatricopeptide repeat...   112   4e-23
ref|XP_004968227.1| PREDICTED: putative pentatricopeptide repeat...   105   8e-21
ref|XP_006286634.1| hypothetical protein CARUB_v10002473mg [Caps...   101   9e-20
ref|XP_006407002.1| hypothetical protein EUTSA_v10022416mg [Eutr...   101   1e-19
emb|CBI20261.3| unnamed protein product [Vitis vinifera]              101   1e-19
ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat...   101   1e-19
emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]   101   1e-19
ref|XP_006400022.1| hypothetical protein EUTSA_v10015264mg [Eutr...   100   2e-19
gb|EOY13086.1| Tetratricopeptide repeat (TPR)-like superfamily p...   100   2e-19
ref|XP_006300036.1| hypothetical protein CARUB_v10016260mg [Caps...   100   2e-19
ref|XP_002871645.1| pentatricopeptide repeat-containing protein ...   100   2e-19
ref|XP_006464901.1| PREDICTED: putative pentatricopeptide repeat...    99   4e-19
ref|XP_006451781.1| hypothetical protein CICLE_v10007960mg [Citr...    99   4e-19
ref|NP_001148062.1| GTP binding protein [Zea mays] gi|195615570|...    99   6e-19
ref|NP_188138.1| pentatricopeptide repeat-containing protein [Ar...    99   8e-19
ref|NP_001130971.1| GTP binding protein [Zea mays] gi|194690592|...    99   8e-19
gb|EMJ12688.1| hypothetical protein PRUPE_ppa007680mg [Prunus pe...    98   1e-18
ref|XP_002885074.1| pentatricopeptide repeat-containing protein ...    98   1e-18
ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [S...    98   1e-18

>ref|XP_006358965.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Solanum tuberosum]
          Length = 489

 Score =  114 bits (285), Expect = 1e-23
 Identities = 65/175 (37%), Positives = 98/175 (56%), Gaps = 3/175 (1%)
 Frame = +3

Query: 6   KEGKVQDALSLVENM-SKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSR 182
           K GK+  A+ L + M  KG +  P+  + N +I GLC   R+  ALEIF +M + +    
Sbjct: 257 KSGKISRAVELFQTMWEKGCK--PDVAICNCIIDGLCFKKRIPDALEIFHEMNERD---- 310

Query: 183 CKPDVITYNILIKRLCMNRMADKAHQLFDEMEASGH--VATIRTFQGLFRFAKSADEIQA 356
           C PDV+TYN LIK LC  R  +K ++L DEME  G   +   RT+  L   AK+++E   
Sbjct: 311 CLPDVVTYNSLIKNLCKIRRMEKVYELLDEMETKGESCLPNARTYGYLLNSAKTSEEAIG 370

Query: 357 VLDKMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
           +L++M +   K+    Y  L+  ++  D   KV  +WDEM++ G+ P  R YT+M
Sbjct: 371 ILERMNENQCKMTGDIYNLLLRLFMSWDNQDKVKSMWDEMERSGLGPDQRSYTIM 425



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 5/170 (2%)
 Frame = +3

Query: 18  VQDALSLVENMSKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSRCKPDV 197
           V+DA  L  N  K +  + N    N+++ G C  G   +A   + D+      S+CKPD 
Sbjct: 192 VEDAEFLFHN--KINEFKDNIKTRNIILNGWCVLGNSREAKRFWNDIVT----SKCKPDK 245

Query: 198 ITYNILIKRLCMNRMADKAHQLFDEMEASG---HVATIRTFQGLFRFAKSADEIQAVLDK 368
            TY I I  LC +    +A +LF  M   G    VA          F K   +   +  +
Sbjct: 246 FTYGIFINSLCKSGKISRAVELFQTMWEKGCKPDVAICNCIIDGLCFKKRIPDALEIFHE 305

Query: 369 MEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGIS--PHARIY 512
           M +R      ++Y  L+    ++   +KVYEL DEM+ KG S  P+AR Y
Sbjct: 306 MNERDCLPDVVTYNSLIKNLCKIRRMEKVYELLDEMETKGESCLPNARTY 355


>ref|XP_004252116.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Solanum lycopersicum]
          Length = 488

 Score =  112 bits (281), Expect = 4e-23
 Identities = 65/175 (37%), Positives = 97/175 (55%), Gaps = 3/175 (1%)
 Frame = +3

Query: 6   KEGKVQDALSLVENM-SKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSR 182
           K GK+  A+ L + M  KG +  P+  + N +I GLC   R+ +ALEIF +M + +    
Sbjct: 256 KSGKISRAVELFQTMWEKGCK--PDVAICNCIIDGLCFKKRIPEALEIFREMNERD---- 309

Query: 183 CKPDVITYNILIKRLCMNRMADKAHQLFDEMEASGH--VATIRTFQGLFRFAKSADEIQA 356
           C PDV+TYN LIK LC  R  +K ++L DEME  G   +   RT+  L   AK+ +E   
Sbjct: 310 CLPDVVTYNSLIKNLCKIRRIEKVYELLDEMETKGESCLPNARTYGYLLNSAKTPEEAIG 369

Query: 357 VLDKMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
           +L++M     K+    Y  L+  ++  D+  KV   WDEM++ G+ P  R YT+M
Sbjct: 370 ILERMNGNQCKMTGDIYNLLLRLFMSWDDQDKVKSTWDEMERSGLGPDQRSYTIM 424



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
 Frame = +3

Query: 18  VQDALSLVENMSKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSRCKPDV 197
           V+DA  L  N  K    + N    N+++ G C  G   +A   + D+      S+CKPD 
Sbjct: 191 VEDAEFLFYN--KIIEFKDNIKTRNIILNGWCVLGNSREAKRFWNDIVT----SKCKPDK 244

Query: 198 ITYNILIKRLCMNRMADKAHQLFDEMEASG---HVATIRTFQGLFRFAKSADEIQAVLDK 368
            TY I I  LC +    +A +LF  M   G    VA          F K   E   +  +
Sbjct: 245 FTYGIFINSLCKSGKISRAVELFQTMWEKGCKPDVAICNCIIDGLCFKKRIPEALEIFRE 304

Query: 369 MEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGIS--PHARIY 512
           M +R      ++Y  L+    ++   +KVYEL DEM+ KG S  P+AR Y
Sbjct: 305 MNERDCLPDVVTYNSLIKNLCKIRRIEKVYELLDEMETKGESCLPNARTY 354


>ref|XP_004968227.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Setaria italica]
          Length = 541

 Score =  105 bits (261), Expect = 8e-21
 Identities = 60/173 (34%), Positives = 97/173 (56%), Gaps = 1/173 (0%)
 Frame = +3

Query: 6   KEGKVQDALSLVENM-SKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSR 182
           K+G++  A+ L  +M  KG    P+  + N +I  LC   R+ +ALEIF +M       R
Sbjct: 303 KDGRIGSAVKLFNSMWEKGIN--PDVAICNCIIDQLCFKKRIPEALEIFGEMNDR----R 356

Query: 183 CKPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIRTFQGLFRFAKSADEIQAVL 362
           C+ DV TYN LIK LC  +  +K ++L DEMEA G     RT+  + +  +   ++ A++
Sbjct: 357 CQADVATYNTLIKYLCNIKRMEKVYELLDEMEAKGCSPNNRTYSYILKTTEKPKDVIALM 416

Query: 363 DKMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
            +ME+ G KL   +Y  ++  Y+     K V+++WDEM++ G  P  R +T+M
Sbjct: 417 QRMEQTGCKLDSDTYNLILNLYVDWKYEKGVHQIWDEMERNGSGPDQRSFTIM 469


>ref|XP_006286634.1| hypothetical protein CARUB_v10002473mg [Capsella rubella]
           gi|482555340|gb|EOA19532.1| hypothetical protein
           CARUB_v10002473mg [Capsella rubella]
          Length = 580

 Score =  101 bits (252), Expect = 9e-20
 Identities = 57/172 (33%), Positives = 92/172 (53%)
 Frame = +3

Query: 6   KEGKVQDALSLVENMSKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSRC 185
           K G +   L L + M K     P+  + N ++  L     +++A  + + M++E+     
Sbjct: 319 KGGSLNKVLRLFDRMKKEGIE-PDRKVYNAVVHALAKASFVSEARNLMKTMEEEKG---I 374

Query: 186 KPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIRTFQGLFRFAKSADEIQAVLD 365
           KP+V+TYN +IK LC  R  ++A Q+FDEM   G   TIRT+    R  ++ +E+  +L 
Sbjct: 375 KPNVVTYNSIIKPLCKARKTEEAKQVFDEMLGKGLFPTIRTYHAFMRILRTGEEVFELLA 434

Query: 366 KMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
           KM K G +    +Y+ L+ +  R  ++  V  LWDEMK+KG+ P    Y VM
Sbjct: 435 KMRKMGCEPTVDTYIMLIRKLCRWRDFNNVLLLWDEMKEKGVGPDLSSYIVM 486


>ref|XP_006407002.1| hypothetical protein EUTSA_v10022416mg [Eutrema salsugineum]
           gi|557108148|gb|ESQ48455.1| hypothetical protein
           EUTSA_v10022416mg [Eutrema salsugineum]
          Length = 525

 Score =  101 bits (251), Expect = 1e-19
 Identities = 55/174 (31%), Positives = 100/174 (57%), Gaps = 2/174 (1%)
 Frame = +3

Query: 6   KEGKVQDALSLVENMSKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSRC 185
           K+GK+  A+ L   M + + R P+  + N +I  LC   R+ +AL++F++M ++     C
Sbjct: 296 KKGKLGKAMELYRAMWE-TGRSPDVKICNNIIDALCFKKRIPEALQVFKEMSEKG----C 350

Query: 186 KPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIR--TFQGLFRFAKSADEIQAV 359
            P+V+TYN L+K LC  R  +K  +L +EME  G   +    TF  L ++++   +++AV
Sbjct: 351 SPNVVTYNSLLKHLCKIRRTEKVWELVEEMERKGGSCSPNDVTFGYLLKYSQRPMDVEAV 410

Query: 360 LDKMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
           L++M K   ++    Y  +   Y++ ++ +K  E+W EM++ G+ P  R YT+M
Sbjct: 411 LERMAKNRCEMTSDLYNLMFRLYVQWEDEEKAREIWGEMERSGLEPDQRTYTIM 464


>emb|CBI20261.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  101 bits (251), Expect = 1e-19
 Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 1/173 (0%)
 Frame = +3

Query: 6   KEGKVQDALSLVENM-SKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSR 182
           K GK+  A+ L + M  KG    P+  + N +I  LC   R+ +ALE+  +M + +    
Sbjct: 269 KAGKLSTAVKLFQAMWEKGCN--PDVAICNCIIDALCFKKRIPEALEVLREMNERD---- 322

Query: 183 CKPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIRTFQGLFRFAKSADEIQAVL 362
           C+PDV TYN LIK LC  +  +K ++L D+ME  G +   RT+  L +  K  +E+  +L
Sbjct: 323 CQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEEVPGIL 382

Query: 363 DKMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
           ++ME+ G ++    Y  ++  Y+      K+    DEM++ G+ P  R YT+M
Sbjct: 383 ERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIM 435



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
 Frame = +3

Query: 87  LNMLILGLCSNGRMTQALEIFEDMKKEERKSRCKPDVITYNILIKRLCMNRMADKAHQLF 266
           +N+++ G C  G + +A   + D+      S+CKPD  TY I I  L        A +LF
Sbjct: 225 MNVILNGWCVLGSLREAKRFWNDIIT----SKCKPDKFTYGIFINSLTKAGKLSTAVKLF 280

Query: 267 DEMEASG---HVATIRTFQGLFRFAKSADEIQAVLDKMEKRGVKLLPLSYLYLVTRYIRL 437
             M   G    VA          F K   E   VL +M +R  +    +Y  L+    ++
Sbjct: 281 QAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKI 340

Query: 438 DEWKKVYELWDEMKQKGISPHARIY 512
             ++KVYEL D+M+QKG  P+AR Y
Sbjct: 341 QRFEKVYELLDDMEQKGCLPNARTY 365


>ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Vitis vinifera]
          Length = 546

 Score =  101 bits (251), Expect = 1e-19
 Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 1/173 (0%)
 Frame = +3

Query: 6   KEGKVQDALSLVENM-SKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSR 182
           K GK+  A+ L + M  KG    P+  + N +I  LC   R+ +ALE+  +M + +    
Sbjct: 306 KAGKLSTAVKLFQAMWEKGCN--PDVAICNCIIDALCFKKRIPEALEVLREMNERD---- 359

Query: 183 CKPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIRTFQGLFRFAKSADEIQAVL 362
           C+PDV TYN LIK LC  +  +K ++L D+ME  G +   RT+  L +  K  +E+  +L
Sbjct: 360 CQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEEVPGIL 419

Query: 363 DKMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
           ++ME+ G ++    Y  ++  Y+      K+    DEM++ G+ P  R YT+M
Sbjct: 420 ERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIM 472



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
 Frame = +3

Query: 51  SKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSRCKPDVITYNILIKRLC 230
           SK +   P+   +N+++ G C  G + +A   + D+      S+CKPD  TY I I  L 
Sbjct: 250 SKKNEFPPDIKSMNVILNGWCVLGSLREAKRFWNDIIT----SKCKPDKFTYGIFINSLT 305

Query: 231 MNRMADKAHQLFDEMEASG---HVATIRTFQGLFRFAKSADEIQAVLDKMEKRGVKLLPL 401
                  A +LF  M   G    VA          F K   E   VL +M +R  +    
Sbjct: 306 KAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVA 365

Query: 402 SYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIY 512
           +Y  L+    ++  ++KVYEL D+M+QKG  P+AR Y
Sbjct: 366 TYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTY 402


>emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
          Length = 546

 Score =  101 bits (251), Expect = 1e-19
 Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 1/173 (0%)
 Frame = +3

Query: 6   KEGKVQDALSLVENM-SKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSR 182
           K GK+  A+ L + M  KG    P+  + N +I  LC   R+ +ALE+  +M + +    
Sbjct: 306 KAGKLSTAVKLFQAMWEKGCN--PDVAICNCIIDALCFKKRIPEALEVLREMNERD---- 359

Query: 183 CKPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIRTFQGLFRFAKSADEIQAVL 362
           C+PDV TYN LIK LC  +  +K ++L D+ME  G +   RT+  L +  K  +E+  +L
Sbjct: 360 CQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEEVPGIL 419

Query: 363 DKMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
           ++ME+ G ++    Y  ++  Y+      K+    DEM++ G+ P  R YT+M
Sbjct: 420 ERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIM 472



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
 Frame = +3

Query: 51  SKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSRCKPDVITYNILIKRLC 230
           SK +   P+   +N+++ G C  G + +A   + D+      S+CKPD  TY I I  L 
Sbjct: 250 SKKNEFPPDIKSMNVILNGWCVLGSLREAKRFWNDIIT----SKCKPDKFTYGIFINSLT 305

Query: 231 MNRMADKAHQLFDEMEASG---HVATIRTFQGLFRFAKSADEIQAVLDKMEKRGVKLLPL 401
                  A +LF  M   G    VA          F K   E   VL +M +R  +    
Sbjct: 306 KAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVA 365

Query: 402 SYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIY 512
           +Y  L+    ++  ++KVYEL D+M+QKG  P+AR Y
Sbjct: 366 TYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTY 402


>ref|XP_006400022.1| hypothetical protein EUTSA_v10015264mg [Eutrema salsugineum]
           gi|557101112|gb|ESQ41475.1| hypothetical protein
           EUTSA_v10015264mg [Eutrema salsugineum]
          Length = 580

 Score =  100 bits (249), Expect = 2e-19
 Identities = 57/172 (33%), Positives = 91/172 (52%)
 Frame = +3

Query: 6   KEGKVQDALSLVENMSKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSRC 185
           K G +   L L E M K     P+    N ++  L     + +A+ +   MK  E++   
Sbjct: 319 KGGNLNKVLRLFERMKKECIE-PDRKAYNAVVHALAKARFVPEAMSL---MKSIEKEKGM 374

Query: 186 KPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIRTFQGLFRFAKSADEIQAVLD 365
           KP+++TYN LIK LC  R  ++A Q+F+EM   G   TIRT+    R  ++ +E+  +L 
Sbjct: 375 KPNIVTYNSLIKPLCKARKTEEAKQVFEEMLEKGIFPTIRTYHAFMRILRTGEEVFELLA 434

Query: 366 KMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
           KM K G +    +Y+ L+ ++ R  ++  V  LWDEMK++G+ P    Y VM
Sbjct: 435 KMRKMGCEPTVDTYIMLIRKFCRWRDFDNVLLLWDEMKEQGVGPDLSSYIVM 486


>gb|EOY13086.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao]
          Length = 534

 Score =  100 bits (249), Expect = 2e-19
 Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
 Frame = +3

Query: 6   KEGKVQDALSLVENM-SKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSR 182
           K+GK+  A+ L   M  KG    P+  + N +I  LC   R+ +ALE+F +M +      
Sbjct: 293 KKGKLGTAMKLFRGMWEKGCD--PDVVICNCVIDALCFKKRIPEALELFREMGERG---- 346

Query: 183 CKPDVITYNILIKRLCMNRMADKAHQLFDEMEASGH-VATIRTFQGLFRFAKSADEIQAV 359
           C P+V+TYN LIK LC  R  +K +++ DEME  G  +    TF  L +  K  +E+  V
Sbjct: 347 CVPNVVTYNSLIKHLCKIRRMEKVYEILDEMEEKGGCLPNDVTFNYLLKSLKKPEEVPGV 406

Query: 360 LDKMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
           L++ME+ G  +   +Y  ++  Y++    ++V   WDEM++ G+ P  R YT+M
Sbjct: 407 LERMERYGCNMSGDTYNLILKLYMKWGHEERVRCTWDEMEKSGLGPDRRSYTIM 460


>ref|XP_006300036.1| hypothetical protein CARUB_v10016260mg [Capsella rubella]
           gi|482568745|gb|EOA32934.1| hypothetical protein
           CARUB_v10016260mg [Capsella rubella]
          Length = 529

 Score =  100 bits (249), Expect = 2e-19
 Identities = 56/173 (32%), Positives = 97/173 (56%), Gaps = 2/173 (1%)
 Frame = +3

Query: 6   KEGKVQDALSLVENMSKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSRC 185
           K+GKV  A+ L   M + + R P+  + N +I  LC   R+ +ALE+F +M ++     C
Sbjct: 300 KKGKVGKAMELYRAMWE-TGRNPDVKICNNIIDALCFKKRIPEALEVFREMGEKG----C 354

Query: 186 KPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIR--TFQGLFRFAKSADEIQAV 359
            P+V+TYN L+K LC  R  +K  +L +EME  G   +    TF  L ++++   +++AV
Sbjct: 355 LPNVVTYNSLLKHLCKIRRTEKVWELVEEMEHKGSCCSPNDVTFGYLLKYSQKPKDVEAV 414

Query: 360 LDKMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTV 518
           L++M K   ++    Y  +   Y++ +   KV E+W +M++ G+ P  R YT+
Sbjct: 415 LERMRKNRCEMTSDLYNLMFRLYVQWENEDKVREIWGKMERSGLGPDQRTYTI 467



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
 Frame = +3

Query: 60  SRRRP---NTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSRCKPDVITYNILIKRLC 230
           SRRR    +   +N+++ G C  G + +A  I++D+      S+C+PDV++Y  +I  L 
Sbjct: 244 SRRREFGCDIKAMNIILNGWCVLGNVHEAKRIWKDIIA----SKCRPDVVSYGTMINALT 299

Query: 231 MNRMADKAHQLFDEMEASGHVATIRTFQGLFR---FAKSADEIQAVLDKMEKRGVKLLPL 401
                 KA +L+  M  +G    ++    +     F K   E   V  +M ++G     +
Sbjct: 300 KKGKVGKAMELYRAMWETGRNPDVKICNNIIDALCFKKRIPEALEVFREMGEKGCLPNVV 359

Query: 402 SYLYLVTRYIRLDEWKKVYELWDEMKQKG 488
           +Y  L+    ++   +KV+EL +EM+ KG
Sbjct: 360 TYNSLLKHLCKIRRTEKVWELVEEMEHKG 388


>ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317482|gb|EFH47904.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 524

 Score =  100 bits (249), Expect = 2e-19
 Identities = 58/172 (33%), Positives = 93/172 (54%)
 Frame = +3

Query: 6   KEGKVQDALSLVENMSKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSRC 185
           K G +   L L + M K S   P+  + N +I  L     +++A  + + M++E+     
Sbjct: 263 KGGSLNKVLKLFDRMKKESIE-PDRKVYNAVIHALAKASFVSEARNLMKTMEEEKGM--- 318

Query: 186 KPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIRTFQGLFRFAKSADEIQAVLD 365
           +P+V+TYN LIK LC  R  ++A Q+FDEM   G   TIRT+    R  ++ +E+  +L 
Sbjct: 319 EPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLA 378

Query: 366 KMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
           KM K G +    +Y+ L+ +  R  ++  V  LW+EMK+KG+ P    Y VM
Sbjct: 379 KMRKMGCQPTVDTYIMLIRKLCRWRDFDNVLLLWNEMKEKGVGPDLSSYIVM 430


>ref|XP_006464901.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Citrus sinensis]
          Length = 536

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 62/175 (35%), Positives = 93/175 (53%), Gaps = 3/175 (1%)
 Frame = +3

Query: 6   KEGKVQDALSLVENM-SKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSR 182
           K+GK+  AL L + M  KG  R+P+    N +I  LC   R+ +ALE+  +MK       
Sbjct: 304 KKGKLGTALRLFQAMWEKG--RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG---- 357

Query: 183 CKPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIR--TFQGLFRFAKSADEIQA 356
           C P+V TYN LIK LC  +  +  ++  +EME           TF  L +  K  +E+  
Sbjct: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLNEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW 417

Query: 357 VLDKMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
           VL++ME+ G K+   +Y  ++  Y+  D   KV   W+EM++KG+ P  R YTVM
Sbjct: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472


>ref|XP_006451781.1| hypothetical protein CICLE_v10007960mg [Citrus clementina]
           gi|557555007|gb|ESR65021.1| hypothetical protein
           CICLE_v10007960mg [Citrus clementina]
          Length = 536

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 62/175 (35%), Positives = 93/175 (53%), Gaps = 3/175 (1%)
 Frame = +3

Query: 6   KEGKVQDALSLVENM-SKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSR 182
           K+GK+  AL L + M  KG  R+P+    N +I  LC   R+ +ALE+  +MK       
Sbjct: 304 KKGKLGTALRLFQAMWEKG--RKPDVVTCNCIIDALCFKKRIPEALEVLREMKNRG---- 357

Query: 183 CKPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIR--TFQGLFRFAKSADEIQA 356
           C P+V TYN LIK LC  +  +  ++  +EME           TF  L +  K  +E+  
Sbjct: 358 CLPNVTTYNSLIKHLCKIKRMETVYEYLNEMEQKNGSCLPNEITFNYLLKSLKKPEEVPW 417

Query: 357 VLDKMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
           VL++ME+ G K+   +Y  ++  Y+  D   KV   W+EM++KG+ P  R YTVM
Sbjct: 418 VLERMERNGCKMSTDTYNVILKLYVNWDCEDKVRHTWEEMEKKGMGPDQRSYTVM 472


>ref|NP_001148062.1| GTP binding protein [Zea mays] gi|195615570|gb|ACG29615.1| GTP
           binding protein [Zea mays]
          Length = 535

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 1/173 (0%)
 Frame = +3

Query: 6   KEGKVQDALSLVENM-SKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSR 182
           K G++  A+ L + M  KG    P+  + N +I  LC   ++ +ALEIF +M        
Sbjct: 297 KNGRISAAVKLFKQMWEKGIN--PDVAICNCIIDQLCFKKKIPEALEIFGEMNDR----L 350

Query: 183 CKPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIRTFQGLFRFAKSADEIQAVL 362
           C+ DV TYN LIK +C  +  +K ++L D+MEA G     RT+  + +  +   ++ A++
Sbjct: 351 CQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCSPNNRTYSYILKTTEKPKDVIALM 410

Query: 363 DKMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
            +ME+ G KL    Y  ++  YI+    K + ++WDEM+++G  P  R +T+M
Sbjct: 411 QRMERSGCKLDSDMYNLILNLYIKWKYEKGMQQIWDEMERRGSGPDQRSFTIM 463


>ref|NP_188138.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273407|sp|Q9LIL5.1|PP233_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g15200 gi|11994509|dbj|BAB02574.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332642110|gb|AEE75631.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 55/173 (31%), Positives = 97/173 (56%), Gaps = 2/173 (1%)
 Frame = +3

Query: 6   KEGKVQDALSLVENMSKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSRC 185
           K+GK+  A+ L   M   +RR P+  + N +I  LC   R+ +ALE+F ++ ++      
Sbjct: 294 KKGKLGKAMELYRAMWD-TRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPD--- 349

Query: 186 KPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIR--TFQGLFRFAKSADEIQAV 359
            P+V+TYN L+K LC  R  +K  +L +EME  G   +    TF  L ++++ + ++  V
Sbjct: 350 -PNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIV 408

Query: 360 LDKMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTV 518
           L++M K   ++    Y  +   Y++ D+ +KV E+W EM++ G+ P  R YT+
Sbjct: 409 LERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTI 461


>ref|NP_001130971.1| GTP binding protein [Zea mays] gi|194690592|gb|ACF79380.1| unknown
           [Zea mays] gi|413947420|gb|AFW80069.1| GTP binding
           protein [Zea mays]
          Length = 535

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 1/173 (0%)
 Frame = +3

Query: 6   KEGKVQDALSLVENM-SKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSR 182
           K G++  A+ L + M  KG    P+  + N +I  LC   ++ +ALEIF +M        
Sbjct: 297 KNGRISAAVKLFKQMWEKGIN--PDVAICNCIIDQLCFKKKIPEALEIFGEMNDR----L 350

Query: 183 CKPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIRTFQGLFRFAKSADEIQAVL 362
           C+ DV TYN LIK +C  +  +K ++L D+MEA G     RT+  + +  +   ++ A++
Sbjct: 351 CQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCPPNNRTYSYILKTTEKPKDVIALM 410

Query: 363 DKMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
            +ME+ G KL    Y  ++  YI+    K + ++WDEM+++G  P  R +T+M
Sbjct: 411 QRMERTGCKLDSDIYNLILNLYIKWKYEKGMQQIWDEMERRGSGPDQRSFTIM 463


>gb|EMJ12688.1| hypothetical protein PRUPE_ppa007680mg [Prunus persica]
          Length = 359

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 61/175 (34%), Positives = 92/175 (52%), Gaps = 3/175 (1%)
 Frame = +3

Query: 6   KEGKVQDALSLVENM-SKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSR 182
           K+GK+  AL L   M  +G    PN    + +I  LC   R+ QALE+F++M        
Sbjct: 139 KKGKLGTALKLFRAMWDQGCN--PNVVTCSCMIDALCFKKRIPQALEVFQEMNVRG---- 192

Query: 183 CKPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIR--TFQGLFRFAKSADEIQA 356
           C P+  TYN LIK LC  R  +K ++L DEME  G        TF  L +  K  +E+  
Sbjct: 193 CLPNAATYNSLIKHLCKIRRMEKVYELLDEMEQKGGSCLPNEVTFNCLLKSLKKPEEVPG 252

Query: 357 VLDKMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
           +L++MEK   K+   +Y  L+  Y+  D  +++   W+EM++ G+ P  R YT+M
Sbjct: 253 LLERMEKSRCKMTSDTYNLLLKLYMEWDCEERLRYTWEEMERNGLGPDQRSYTIM 307



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
 Frame = +3

Query: 54  KGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSRCKPDVITYNILIKRLCM 233
           KG     +    N+++ G C    + +A   ++D+      S+CKPD  TY I I  L  
Sbjct: 84  KGKEFEQDIKTWNIILNGWCVRANVREAKRFWKDIIA----SKCKPDQFTYGIFINSLTK 139

Query: 234 NRMADKAHQLFDEMEASG---HVATIRTFQGLFRFAKSADEIQAVLDKMEKRGVKLLPLS 404
                 A +LF  M   G   +V T         F K   +   V  +M  RG      +
Sbjct: 140 KGKLGTALKLFRAMWDQGCNPNVVTCSCMIDALCFKKRIPQALEVFQEMNVRGCLPNAAT 199

Query: 405 YLYLVTRYIRLDEWKKVYELWDEMKQKG 488
           Y  L+    ++   +KVYEL DEM+QKG
Sbjct: 200 YNSLIKHLCKIRRMEKVYELLDEMEQKG 227


>ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330914|gb|EFH61333.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 517

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 55/173 (31%), Positives = 98/173 (56%), Gaps = 2/173 (1%)
 Frame = +3

Query: 6   KEGKVQDALSLVENMSKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSRC 185
           K+GK+  A+ L   + + + R P+  + N +I  LC   R+ +ALE+F++M ++      
Sbjct: 288 KKGKLGKAMELYRALWE-TGRNPDVKICNNVIDALCFKKRIPEALEVFKEMSEKGPS--- 343

Query: 186 KPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIR--TFQGLFRFAKSADEIQAV 359
            P+V+TYN L+K LC  R  +K  +L +EME  G   +    TF  L ++++ + ++ AV
Sbjct: 344 -PNVVTYNSLLKHLCKIRRTEKVWELVEEMEHKGGSCSPNDVTFGYLLKYSQRSKDVDAV 402

Query: 360 LDKMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTV 518
           L++M K   ++    Y  +   Y++ D  +KV E+W EM++ G+ P  R YT+
Sbjct: 403 LERMAKNKCEMTSDLYNLMFRLYVQWDNEEKVREIWGEMERSGLGPDQRTYTI 455


>ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
           gi|241929332|gb|EES02477.1| hypothetical protein
           SORBIDRAFT_03g005950 [Sorghum bicolor]
          Length = 543

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 55/172 (31%), Positives = 93/172 (54%)
 Frame = +3

Query: 6   KEGKVQDALSLVENMSKGSRRRPNTHMLNMLILGLCSNGRMTQALEIFEDMKKEERKSRC 185
           K G++  A+ L + M + +   P+  + N +I  LC   R+ +ALEIF +M        C
Sbjct: 305 KNGRISAAVKLFKKMWE-TGINPDVAICNCIIDQLCFKNRIPEALEIFGEMNDR----LC 359

Query: 186 KPDVITYNILIKRLCMNRMADKAHQLFDEMEASGHVATIRTFQGLFRFAKSADEIQAVLD 365
           + DV TYN LIK LC  +  +K ++L D+MEA G     RT+  + +  +   ++ A++ 
Sbjct: 360 QADVATYNTLIKYLCKKKRMEKVYELLDDMEAKGCSPNNRTYSYVLKTTEKPKDVIALMQ 419

Query: 366 KMEKRGVKLLPLSYLYLVTRYIRLDEWKKVYELWDEMKQKGISPHARIYTVM 521
           +ME+ G +L   +Y  ++  Y      K V ++WDEM++ G  P  R +T+M
Sbjct: 420 RMEQTGCELDSDTYNLILNLYTNWKYEKGVQQVWDEMERNGSGPDQRSFTIM 471