BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00028996
         (458 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containi...   102   5e-20
gb|EMJ10001.1| hypothetical protein PRUPE_ppa024573mg [Prunus pe...   100   2e-19
ref|XP_004301012.1| PREDICTED: pentatricopeptide repeat-containi...    98   1e-18
ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containi...    98   1e-18
ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containi...    98   1e-18
gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygr...    97   2e-18
ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_004305327.1| PREDICTED: putative pentatricopeptide repeat...    97   2e-18
ref|XP_002523781.1| pentatricopeptide repeat-containing protein,...    96   4e-18
gb|EXB63462.1| hypothetical protein L484_005425 [Morus notabilis]      96   5e-18
ref|XP_006356287.1| PREDICTED: pentatricopeptide repeat-containi...    96   5e-18
ref|XP_006857845.1| hypothetical protein AMTR_s00069p00058270 [A...    96   6e-18
ref|XP_003573696.1| PREDICTED: pentatricopeptide repeat-containi...    95   1e-17
ref|XP_002873605.1| pentatricopeptide repeat-containing protein ...    95   1e-17
ref|XP_004237761.1| PREDICTED: pentatricopeptide repeat-containi...    94   1e-17
gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygr...    94   1e-17
ref|XP_006406039.1| hypothetical protein EUTSA_v10020184mg [Eutr...    94   2e-17
ref|XP_004506883.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
gb|EXC45444.1| hypothetical protein L484_000697 [Morus notabilis]      93   3e-17

>ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449524140|ref|XP_004169081.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  102 bits (254), Expect = 5e-20
 Identities = 51/143 (35%), Positives = 86/143 (60%), Gaps = 3/143 (2%)
 Frame = +3

Query: 27  KSDCDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMGFQDNVFV 197
           K   DNA+ LF +M +   +    TFSS+L +   +K  +EG  +H  ++K GF+ N FV
Sbjct: 99  KRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFV 158

Query: 198 MTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALV 377
              L+ MYA  G+IG AR VFD M  ++ ++W  M++G T+N  + + + +F+ +    +
Sbjct: 159 ENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRI 218

Query: 378 PLDDYALSTVLTSCGRLSDLKLG 446
             DD  + +VL +CGRL++L++G
Sbjct: 219 EFDDVTMISVLMACGRLANLEIG 241



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 41/150 (27%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMG 176
           GY + G     D  ++LF ++ +   E   +T  S+L +   L   + G  I   ++  G
Sbjct: 196 GYTKNGL---WDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKG 252

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
            + N  + T L+ MYA+ G++  AR++FD+M  +  ++W  M++G  Q    ++AL +F 
Sbjct: 253 LRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFH 312

Query: 357 DMARALVPLDDYALSTVLTSCGRLSDLKLG 446
           +M +  V  ++  + +VL SC  L   + G
Sbjct: 313 EMQKGNVYPNEVTMVSVLYSCAMLGAYETG 342



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMG 176
           GYA+      C  A+ LF  MQK    P+ +T  S+L S   L   + G  +H  + K  
Sbjct: 297 GYAQADR---CKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKK 353

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
            +  V + T L+  YA+ G I  + +VF +MS +   +W  ++ GL  N E + AL  F 
Sbjct: 354 MKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFS 413

Query: 357 DMARALVPLDDYALSTVLTSC 419
            M    V  +D     VL++C
Sbjct: 414 SMLENDVKPNDVTFIGVLSAC 434


>gb|EMJ10001.1| hypothetical protein PRUPE_ppa024573mg [Prunus persica]
          Length = 699

 Score =  100 bits (250), Expect = 2e-19
 Identities = 54/137 (39%), Positives = 85/137 (62%), Gaps = 3/137 (2%)
 Frame = +3

Query: 45  AIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMGFQDNVFVMTGLVT 215
           A  LF +MQ+   EP   T SSIL +   L+  +EG  IH  ++K GF+ N FV   L+ 
Sbjct: 109 AFLLFKKMQESSAEPDEFTLSSILKACSKLRALREGEQIHAHIVKCGFKSNGFVENTLIH 168

Query: 216 MYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPLDDYA 395
           MYA  GE+  AR+VFD +  +  ++W  M+AG  +N+ + + + +F +M +  V  D+  
Sbjct: 169 MYATCGELEVARRVFDGLPERARMAWNSMLAGYMKNKCWDEVVKLFHEMLKLGVGFDEVT 228

Query: 396 LSTVLTSCGRLSDLKLG 446
           L++VLT+CGRL++L+LG
Sbjct: 229 LTSVLTACGRLANLELG 245



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
 Frame = +3

Query: 27  KSDC-DNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMGFQDNVF 194
           K+ C D  ++LF  M K G     +T +S+L +   L   + G  I   +     + N+ 
Sbjct: 203 KNKCWDEVVKLFHEMLKLGVGFDEVTLTSVLTACGRLANLELGEWIGDYIEANRLKGNIA 262

Query: 195 VMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARAL 374
           ++T LV MYA+ G++  AR+ FD+M  +  ++W  M++G +Q    R+AL +F DM +A 
Sbjct: 263 LVTSLVDMYAKCGQVETARRFFDRMDRRDVVAWSAMISGYSQANRCREALDLFHDMQKAN 322

Query: 375 VPLDDYALSTVLTSCGRLSDLKLG 446
           V  ++  + +VL SC  L  LK G
Sbjct: 323 VDPNEVTMVSVLYSCAVLGALKTG 346



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
 Frame = +3

Query: 36  CDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMGFQDNVFVMTG 206
           C  A+ LF  MQK   +P+ +T  S+L S   L   K G  +   + K   +  V + T 
Sbjct: 308 CREALDLFHDMQKANVDPNEVTMVSVLYSCAVLGALKTGKWVEFYIKKEKLKLTVNLGTA 367

Query: 207 LVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPLD 386
           L+  YA+ G I  + +VF++M      SW  ++ GL  N + + AL  F+ M    +  +
Sbjct: 368 LIDFYAKCGCIDSSIEVFNRMPSTNVFSWTALIQGLASNGQGKGALEYFQLMQEKNIKPN 427

Query: 387 DYALSTVLTSC 419
           +     VL++C
Sbjct: 428 NVTFIAVLSAC 438


>ref|XP_004301012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Fragaria vesca subsp. vesca]
          Length = 704

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 50/138 (36%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
 Frame = +3

Query: 42  NAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMGFQDNVFVMTGLV 212
           +AI LF++M +   +P   TFSS+L +   L+   EG  +H+ ++K GF+ N FV+  L+
Sbjct: 111 DAIVLFIKMVENSVQPDEFTFSSVLKACSRLRALGEGEQVHSHIVKCGFKSNGFVVNTLI 170

Query: 213 TMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPLDDY 392
            MYA  GE+  ARQVFD +  +  ++W  M+AG  +N  + + + +F+ M    +  D+ 
Sbjct: 171 HMYAVCGELDVARQVFDGLPERNVMAWNSMMAGYVKNERWGEVVELFRKMLGLGIGFDEV 230

Query: 393 ALSTVLTSCGRLSDLKLG 446
            L +VLT+CGR+++L++G
Sbjct: 231 TLISVLTACGRVANLEMG 248



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
 Frame = +3

Query: 48  IQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMGFQDNVFVMTGLVTM 218
           ++LF +M   G     +T  S+L +   +   + G  I   V   G + N+ ++T LV M
Sbjct: 214 VELFRKMLGLGIGFDEVTLISVLTACGRVANLEMGEWIGEYVEANGLKGNIALVTSLVDM 273

Query: 219 YARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPLDDYAL 398
           YA+ G++  AR++FD+M  +  ++W  M++G  Q    R+AL +F DM +A V  ++  +
Sbjct: 274 YAKCGQVDKARRIFDRMDKRDVVAWSAMISGYGQANRCREALDLFHDMQKANVDPNEVTM 333

Query: 399 STVLTSCGRLSDLKLG 446
            +VL SCG L  L  G
Sbjct: 334 VSVLYSCGVLGALDTG 349



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
 Frame = +3

Query: 21  GEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMGFQDNV 191
           G+ + C  A+ LF  MQK   +P+ +T  S+L S   L     G  +   V K   +  V
Sbjct: 306 GQANRCREALDLFHDMQKANVDPNEVTMVSVLYSCGVLGALDTGKWVDFYVKKKKMKLTV 365

Query: 192 FVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARA 371
            + T L+  YA+ G +GD+ +VF++M      SW  ++ GL  N + + AL  FK M   
Sbjct: 366 TLGTALIDFYAKCGCVGDSIEVFNRMPSVNVFSWTALIQGLASNGQGKRALDYFKLMQEK 425

Query: 372 LVPLDDYALSTVLTSC 419
            +  +D     VL++C
Sbjct: 426 NIKPNDVTFLAVLSAC 441


>ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 58/144 (40%), Positives = 85/144 (59%), Gaps = 3/144 (2%)
 Frame = +3

Query: 24  EKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLK-TRKEGLG--IHTKVMKMGFQDNVF 194
           +K+  D  I+++M MQ     P+  TF  +L +   T  EG+G  IH +  K GF  NVF
Sbjct: 62  QKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVF 121

Query: 195 VMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARAL 374
           V   LV+MYA+FG+I  AR VFDK+  +T +SW  +++G  QN +  +AL VFK+M +  
Sbjct: 122 VQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCN 181

Query: 375 VPLDDYALSTVLTSCGRLSDLKLG 446
           V  D  AL +V+T+   + DL  G
Sbjct: 182 VKPDWIALVSVMTAYTNVEDLGQG 205



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/150 (25%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTRKEGLG----IHTKVMKM 173
           GY + G+  +   A+ +F  M++   +P  +   S++ +  T  E LG    IH  V K+
Sbjct: 160 GYVQNGDPME---ALNVFKEMRQCNVKPDWIALVSVMTAY-TNVEDLGQGKSIHGLVTKL 215

Query: 174 GFQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVF 353
           G +    ++  L TMYA+ G +  AR  F++M     I W  M++G   N    +A+ +F
Sbjct: 216 GLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLF 275

Query: 354 KDMARALVPLDDYALSTVLTSCGRLSDLKL 443
           ++M    + +D   + + + +  ++  L+L
Sbjct: 276 REMITKNIRVDSITMRSAVLASAQVGSLEL 305



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTF-SSILPSLKTRKEGLG--IHTKVMKMG 176
           GYA  G   +   AI+LF  M        ++T  S++L S +     L   +   + K  
Sbjct: 261 GYANNGYGEE---AIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSE 317

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
           ++D+ FV TGL+ MYA+ G I  AR VFD+++ +  + W  M+ G   +   ++A+ ++ 
Sbjct: 318 YRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYN 377

Query: 357 DMARALVPLDDYALSTVLTSCGRLSDLKLG 446
           +M +A V  +D     +LT+C     +K G
Sbjct: 378 EMKQAGVCPNDGTFIGLLTACKNSGLVKEG 407


>ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 58/144 (40%), Positives = 85/144 (59%), Gaps = 3/144 (2%)
 Frame = +3

Query: 24  EKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLK-TRKEGLG--IHTKVMKMGFQDNVF 194
           +K+  D  I+++M MQ     P+  TF  +L +   T  EG+G  IH +  K GF  NVF
Sbjct: 77  QKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVF 136

Query: 195 VMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARAL 374
           V   LV+MYA+FG+I  AR VFDK+  +T +SW  +++G  QN +  +AL VFK+M +  
Sbjct: 137 VQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCN 196

Query: 375 VPLDDYALSTVLTSCGRLSDLKLG 446
           V  D  AL +V+T+   + DL  G
Sbjct: 197 VKPDWIALVSVMTAYTNVEDLGQG 220



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/150 (25%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTRKEGLG----IHTKVMKM 173
           GY + G+  +   A+ +F  M++   +P  +   S++ +  T  E LG    IH  V K+
Sbjct: 175 GYVQNGDPME---ALNVFKEMRQCNVKPDWIALVSVMTAY-TNVEDLGQGKSIHGLVTKL 230

Query: 174 GFQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVF 353
           G +    ++  L TMYA+ G +  AR  F++M     I W  M++G   N    +A+ +F
Sbjct: 231 GLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLF 290

Query: 354 KDMARALVPLDDYALSTVLTSCGRLSDLKL 443
           ++M    + +D   + + + +  ++  L+L
Sbjct: 291 REMITKNIRVDSITMRSAVLASAQVGSLEL 320



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTF-SSILPSLKTRKEGLG--IHTKVMKMG 176
           GYA  G   +   AI+LF  M        ++T  S++L S +     L   +   + K  
Sbjct: 276 GYANNGYGEE---AIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSE 332

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
           ++D+ FV TGL+ MYA+ G I  AR VFD+++ +  + W  M+ G   +   ++A+ ++ 
Sbjct: 333 YRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYN 392

Query: 357 DMARALVPLDDYALSTVLTSCGRLSDLKLG 446
           +M +A V  +D     +LT+C     +K G
Sbjct: 393 EMKQAGVCPNDGTFIGLLTACKNSGLVKEG 422


>gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 55/153 (35%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
 Frame = +3

Query: 3   GGYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTRKE---GLGIHTKVMKM 173
           GGYA+ G   D + A QLF RMQ+ GF+P+ ++F SIL    T +    G  +H + M  
Sbjct: 236 GGYAKSG---DGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNT 292

Query: 174 GFQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVF 353
           G  D+V V T L+ MY   G I  AR+VFDKM ++  +SW  M+ G  +N    DA  +F
Sbjct: 293 GLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLF 352

Query: 354 KDMARALVPLDDYALSTVLTSCGRLSDLKLGAQ 452
             M    +  D      ++ +C   +DL L  +
Sbjct: 353 ATMQEEGIQPDRITYIHIINACASSADLSLARE 385



 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 54/152 (35%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTRKE---GLGIHTKVMKMG 176
           GYA   E S+ ++A  LF  MQ+ G +P  +T+  I+ +  +  +      IH++V++ G
Sbjct: 338 GYA---ENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAG 394

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
           F  ++ V T LV MYA+ G I DARQVFD MS +  +SW  M+    +N    +A   F 
Sbjct: 395 FGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFH 454

Query: 357 DMARALVPLDDYALSTVLTSCGRLSDLKLGAQ 452
            M R  V  D      +L +CG L  L LG +
Sbjct: 455 LMKRNNVEPDVVTYINLLNACGHLGALDLGME 486



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTR---KEGLGIHTKVMKMG 176
           GYA+ G   +   A  LF +M     EPS +TF  +L +  +    K G   H +V+K+G
Sbjct: 136 GYAQLGHVKE---AFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVG 192

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
           F  +  + T LV+MY + G +  ARQVFD +  +   ++  M+ G  ++ +   A  +F 
Sbjct: 193 FVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFY 252

Query: 357 DMARALVPLDDYALSTVLTSCGRLSDLKLG 446
            M +     +  +  ++L  C     L  G
Sbjct: 253 RMQQEGFKPNRISFLSILDGCSTPEALAWG 282


>ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 55/143 (38%), Positives = 79/143 (55%), Gaps = 3/143 (2%)
 Frame = +3

Query: 27  KSDCDNAIQLFMRMQKFGFEPSAMTFSSILP---SLKTRKEGLGIHTKVMKMGFQDNVFV 197
           K     AI LF  M +   +P   TF  IL     L+   EG  IH  +MK GF  + FV
Sbjct: 102 KQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFV 161

Query: 198 MTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALV 377
              L+ MYA  GE+  AR+VFD+MS +   +W  M AG T++  + + + +F +M    +
Sbjct: 162 KNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDI 221

Query: 378 PLDDYALSTVLTSCGRLSDLKLG 446
             D+  L +VLT+CGRL+DL+LG
Sbjct: 222 RFDEVTLVSVLTACGRLADLELG 244



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 43/150 (28%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMG 176
           GY + G   + +  ++LF  M +       +T  S+L +   L   + G  I+  V + G
Sbjct: 199 GYTKSG---NWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKG 255

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
            + N  ++T LV MYA+ G++  AR++FD+M  +  ++W  M++G +Q    R+AL +F 
Sbjct: 256 LKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFH 315

Query: 357 DMARALVPLDDYALSTVLTSCGRLSDLKLG 446
           +M +A +  ++  + ++L+SC  L  L+ G
Sbjct: 316 EMQKANIDPNEITMVSILSSCAVLGALETG 345



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
 Frame = +3

Query: 24  EKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMGFQDNVF 194
           + S C  A+ LF  MQK   +P+ +T  SIL S   L   + G  +H  + K   +  V 
Sbjct: 303 QASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVT 362

Query: 195 VMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARAL 374
           + T L+  YA+ G +  + +VF KM ++  +SW  ++ GL  N + + AL  F  M    
Sbjct: 363 LGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKN 422

Query: 375 VPLDDYALSTVLTSC 419
           V  +D     VL++C
Sbjct: 423 VEPNDVTFIGVLSAC 437


>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
           protein product [Vitis vinifera]
          Length = 727

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
 Frame = +3

Query: 39  DNAIQLFMRMQKFGFEPSAMTFSSILPSL---KTRKEGLGIHTKVMKMGFQDNVFVMTGL 209
           +  + ++ RM+  G      +F  +L +L   K+  EGL IH    K+GF  + FV TGL
Sbjct: 104 EKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGL 163

Query: 210 VTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPLDD 389
           V MYA  G I +AR +FDKM  +  ++W  M+ G  Q+  + DALL+F++M    V  D+
Sbjct: 164 VRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDE 223

Query: 390 YALSTVLTSCGRLSDLKLG 446
             LSTVL++CGR  +L  G
Sbjct: 224 MMLSTVLSACGRAGNLSYG 242



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMG 176
           GYA   E      A+ LF  MQ  G +P  +T  S++ +   L    +   IH  V K G
Sbjct: 329 GYA---ESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNG 385

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
           F   + +   L+ MYA+ G +  AR++FDKM  +  ISW  M++    + +   AL  F 
Sbjct: 386 FGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFH 445

Query: 357 DMARALVPLDDYALSTVLTSC 419
            M    +  +      VL +C
Sbjct: 446 QMEDENIEPNGITFVGVLYAC 466


>ref|XP_004305327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Fragaria vesca subsp. vesca]
          Length = 518

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTR---KEGLGIHTKVMKMG 176
           GYA RG    C  AI L+ +M + GF P   TF  ++ S   +   +EG  +H  ++K G
Sbjct: 25  GYADRGP---CHEAIFLYRKMHQSGFSPDNYTFPFVVRSCAVQSALREGTEVHCNIIKNG 81

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
           F  +VFV + LV+MYA+ GE  ++  VF+KM ++  +SW  M+AG  +N  Y++ L V +
Sbjct: 82  FSSDVFVQSSLVSMYAQNGETLNSELVFNKMVVRNIVSWTAMIAGYVKNGFYKEGLTVLR 141

Query: 357 DMARALVPLDDYALSTVLTSCGRLSDLKLG 446
           DM  +    +   L ++L +C  L  L LG
Sbjct: 142 DMVASGSQPNVVTLVSILPACASLEFLDLG 171



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
 Frame = +3

Query: 42  NAIQLFMRMQKFGFEPSAMTFSSILPSLKTR---KEGLGIHTKVMKMGFQDNVFVMTGLV 212
           +AI+LF RMQ    E   +T  S++ +  +      G+ +H  V + GF  NV V   L+
Sbjct: 236 HAIKLFCRMQNENVEYDYITIVSVISACASSGALNTGIWLHELVKRKGFGTNVSVTNALI 295

Query: 213 TMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPLDDY 392
            MYA+ G I  A+ VF K+  ++ +SW  ++     +    DAL+ F  M    +  +++
Sbjct: 296 DMYAKCGNIDLAKDVFQKLPHKSVVSWTSIIGACASHGHGDDALMFFSMMKEKGIKPNNF 355

Query: 393 ALSTVLTSC 419
               VL++C
Sbjct: 356 TFIAVLSAC 364



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILP---SLKTRKEGLGIHTKVMKMG 176
           GY + G   +    + +   M   G +P+ +T  SILP   SL+    G  IH   +K+G
Sbjct: 126 GYVKNGFYKE---GLTVLRDMVASGSQPNVVTLVSILPACASLEFLDLGNLIHGHGVKVG 182

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
           F  ++ +M  L+  Y +   +  A+ +FD + ++  +SW  M+A   QN+    A+ +F 
Sbjct: 183 FDSDMSLMNALIAFYGKCRNLETAKSLFDGLVVRNLVSWNAMIAAYEQNKAGMHAIKLFC 242

Query: 357 DMARALVPLDDYALSTVLTSCGRLSDLKLG 446
            M    V  D   + +V+++C     L  G
Sbjct: 243 RMQNENVEYDYITIVSVISACASSGALNTG 272


>ref|XP_002523781.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536869|gb|EEF38507.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 661

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 4/153 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTRK----EGLGIHTKVMKM 173
           GYA  G   +   A++ F  MQ    +P+  TF+++L +L   K    +G+ IHT V+K 
Sbjct: 171 GYAHNGLNME---ALECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIKN 227

Query: 174 GFQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVF 353
           GF+  +FV   L+ MY++ G + +A+ VFD M  +  ISW  MVAG   N  Y +A+ +F
Sbjct: 228 GFEATIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMF 287

Query: 354 KDMARALVPLDDYALSTVLTSCGRLSDLKLGAQ 452
             +  A V L ++  S+V+ SC  + +L    Q
Sbjct: 288 YHLRLAGVKLTNFIFSSVIKSCANIKELGFARQ 320



 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTR----KEGLGIHTKVMKM 173
           GYA+ G   D + A+++ ++M K G EP+  TFSS++ +        ++G   H   +K 
Sbjct: 472 GYAQTG---DTEGAVKILIQMAKKGVEPNEYTFSSVINACTAPTAAVEQGKQFHAWSIKS 528

Query: 174 GFQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVF 353
            F D + V + LVTMYA+ GEI  A +VF +  ++  +SW  MV+G  Q+   R AL VF
Sbjct: 529 RFNDALCVSSALVTMYAKRGEIESANEVFRRQGVRDLVSWNSMVSGYAQHGHARKALEVF 588

Query: 354 KDMARALVPLDDYALSTVLTSC 419
           K+M    + LD      V+++C
Sbjct: 589 KEMQDQNLELDGVTFIGVISAC 610



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 36/127 (28%), Positives = 68/127 (53%)
 Frame = +3

Query: 39  DNAIQLFMRMQKFGFEPSAMTFSSILPSLKTRKEGLGIHTKVMKMGFQDNVFVMTGLVTM 218
           + A+ LF  M + G  P+  TFS+IL +         +H +V+K  ++ +  V T L+  
Sbjct: 383 EQAVNLFCEMSREGVRPNDYTFSTILAAQPVVSP-FEVHAQVIKSDYEKSPSVGTALLDA 441

Query: 219 YARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPLDDYAL 398
           Y + G + +A +VF+++  +  ++W  MVAG  Q  +   A+ +   MA+  V  ++Y  
Sbjct: 442 YVKLGNLNEASKVFERIDDKDIVAWSAMVAGYAQTGDTEGAVKILIQMAKKGVEPNEYTF 501

Query: 399 STVLTSC 419
           S+V+ +C
Sbjct: 502 SSVINAC 508



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 45/141 (31%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
 Frame = +3

Query: 45  AIQLFMRMQKFGFEPSAMTFSSILPSLKTRKEGLG----IHTKVMKMGFQDNVFVMTGLV 212
           AI++F  ++  G + +   FSS++ S    KE LG    +H +V+K GF+ +  + T L+
Sbjct: 283 AIEMFYHLRLAGVKLTNFIFSSVIKSCANIKE-LGFARQLHGQVLKGGFEYDHNIRTALM 341

Query: 213 TMYARFGEIGDARQVFDKM-SIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPLDD 389
             Y +  EI DA ++F  M  I+  +SW  +++G  QN     A+ +F +M+R  V  +D
Sbjct: 342 VAYNKGREIDDAFKIFSMMYGIRNVVSWTAIISGHLQNGLAEQAVNLFCEMSREGVRPND 401

Query: 390 YALSTVLTSCGRLSDLKLGAQ 452
           Y  ST+L +   +S  ++ AQ
Sbjct: 402 YTFSTILAAQPVVSPFEVHAQ 422



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
 Frame = +3

Query: 48  IQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMGFQDNVFVMTGLVTM 218
           + LF+ + +        T S +L +   L  +K G+ +H   +K GF +++ V T LV M
Sbjct: 81  VNLFVAIHRSDLLTDGSTLSCVLKACACLSCKKFGIQVHDYCVKSGFLEDISVGTSLVDM 140

Query: 219 YARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPLDDYAL 398
           Y +   + + ++VFD+M  +  +SW  ++ G   N    +AL  F +M    +  + +  
Sbjct: 141 YMKSEYVEEGKRVFDEMEERNVVSWTSLLVGYAHNGLNMEALECFFEMQAGAIKPNPFTF 200

Query: 399 STVLTSCGRLSDLK 440
           +TVL   G L+D K
Sbjct: 201 ATVL---GALADSK 211


>gb|EXB63462.1| hypothetical protein L484_005425 [Morus notabilis]
          Length = 728

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
 Frame = +3

Query: 12  ARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSL-KTR--KEGLGIHTKVMKMGFQ 182
           +RRG   D D  + ++ RM++ G      +F ++L +  KT+  +EG  IH    KMGF 
Sbjct: 99  SRRG---DADKTLLVYGRMRREGSSVDRYSFPAVLKAAGKTQALEEGREIHGLATKMGFD 155

Query: 183 DNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDM 362
            + FV TGLV MYA  G I D R VFDKMS +  ++W  M+ G +Q+R + +   ++++M
Sbjct: 156 SDPFVQTGLVRMYAGCGRILDGRLVFDKMSQRDVVAWSIMIDGYSQSRLFDNVFNLYEEM 215

Query: 363 ARALVPLDDYALSTVLTSCGRLSDLKLG 446
             + V  D+  LST+L++CGR  +L  G
Sbjct: 216 RNSGVEPDEMILSTILSACGRAGNLSCG 243



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 34/167 (20%)
 Frame = +3

Query: 39  DNAIQLFMRMQKFGFEPSAMTFSSILPSLKTRKE---GLGIHTKVMK------------- 170
           DN   L+  M+  G EP  M  S+IL +         G  IH  V++             
Sbjct: 206 DNVFNLYEEMRNSGVEPDEMILSTILSACGRAGNLSCGKAIHDFVVENSLLADSRLRSAL 265

Query: 171 ------MGFQD------------NVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWK 296
                  G  D            N+ V T +++ Y++ G + DAR +FD+M  +  +SW 
Sbjct: 266 VAMYASCGSMDIAQELFDKMSSKNLVVSTAMISGYSKLGRLQDARLIFDQMVEKDLVSWS 325

Query: 297 EMVAGLTQNREYRDALLVFKDMARALVPLDDYALSTVLTSCGRLSDL 437
            M+AG  ++   ++AL +F DM    +  D   + +V+++C  L  L
Sbjct: 326 AMIAGYAESDWPQEALRLFNDMQLLGIRPDQITMLSVISACAHLGAL 372



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMG 176
           GYA   E      A++LF  MQ  G  P  +T  S++ +   L    +   +H    + G
Sbjct: 330 GYA---ESDWPQEALRLFNDMQLLGIRPDQITMLSVISACAHLGALDKANWMHIYADRNG 386

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
           F   + V   LV MYA+ G +  AR+VF+KM  +  ISW  M+     + +  +AL +F 
Sbjct: 387 FGGALPVSNALVDMYAKCGSLERAREVFEKMQRKNVISWTSMINACAMHGDAVNALSLFH 446

Query: 357 DMARALVPLDDYALSTVLTSC 419
            M    V  +      VL +C
Sbjct: 447 RMKDKNVEPNSVTFVGVLYAC 467


>ref|XP_006356287.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565379764|ref|XP_006356288.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565379766|ref|XP_006356289.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X3 [Solanum tuberosum]
           gi|565379768|ref|XP_006356290.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X4 [Solanum tuberosum]
           gi|565379770|ref|XP_006356291.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like isoform X5 [Solanum tuberosum]
          Length = 1028

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 54/152 (35%), Positives = 87/152 (57%), Gaps = 3/152 (1%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMG 176
           GYA+ G  S C   ++LF  M+   FE    T++SIL +   L+  + G  +H+ ++K  
Sbjct: 404 GYAQNG--SAC-KVVKLFRSMRLSSFETDEYTYTSILSACACLEDVEMGRQLHSIIIKNK 460

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
           F  N+FV   L+ MYA+ G +GDAR+ FDKM ++  ISW  ++ G  Q+ E  +A ++F 
Sbjct: 461 FASNLFVGNALIDMYAKCGALGDARRQFDKMLMRDHISWNAIIVGYVQDEEEEEAFIMFH 520

Query: 357 DMARALVPLDDYALSTVLTSCGRLSDLKLGAQ 452
            M    +  D+  L++VL++C  + DL  G Q
Sbjct: 521 KMTLERIIPDEACLASVLSACANIHDLNKGKQ 552



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 43/152 (28%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILP---SLKTRKEGLGIHTKVMKMG 176
           G+A+ G++ +   AIQ F  M K    P+  T  S+L    S+     GL +H   +K G
Sbjct: 303 GHAKGGKEVE---AIQFFQDMIKASIRPTRSTLGSVLSAVASVANLSFGLQVHALAVKQG 359

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
            + NV+V + L+ MYA+  ++  A ++F+ +  +  + W  ++AG  QN      + +F+
Sbjct: 360 LESNVYVGSSLINMYAKCQKMEAASEIFNSLGEKNEVLWNALLAGYAQNGSACKVVKLFR 419

Query: 357 DMARALVPLDDYALSTVLTSCGRLSDLKLGAQ 452
            M  +    D+Y  +++L++C  L D+++G Q
Sbjct: 420 SMRLSSFETDEYTYTSILSACACLEDVEMGRQ 451



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 49/147 (33%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
 Frame = +3

Query: 27   KSDC-DNAIQLFMRMQKFGFEPSAMTFSSILPSLKT---RKEGLGIHTKVMKMGFQDNVF 194
            ++DC + A+  + +M+KF   P   TF+S L +  T    ++G  IH+ +   GF  +  
Sbjct: 710  QNDCGEEALIGYQKMRKFNVMPDQATFASALKACSTLASMQDGRKIHSLIFHTGFDMDEL 769

Query: 195  VMTGLVTMYARFGEIGDARQVFDKM-SIQTPISWKEMVAGLTQNREYRDALLVFKDMARA 371
              + L+ MYA+ G++  + QVF +M S +  ISW  M+ G  +N    DAL VF++M R 
Sbjct: 770  TSSSLIDMYAKCGDVKCSVQVFSEMVSKKDIISWNSMIVGFAKNGFAEDALKVFEEMKRE 829

Query: 372  LVPLDDYALSTVLTSCGRLSDLKLGAQ 452
             V  DD     VLT+C     +  G Q
Sbjct: 830  SVKPDDITFLGVLTACSHAGMVSEGRQ 856



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 44/151 (29%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
 Frame = +3

Query: 6    GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTRKEGLG--IHTKVMKMGF 179
            GYA+    ++ + A++LF  M   G  PS +TF+SIL +   +   LG  +H+ ++K+GF
Sbjct: 606  GYAQ----TNINYAVRLFQNMLVEGLRPSEVTFASILDACSDQAYMLGRQLHSFILKLGF 661

Query: 180  Q-DNVFVMTGLVTMYARFGEIGDARQVFDKMS-IQTPISWKEMVAGLTQNREYRDALLVF 353
              D+ F+   L+ MY    ++ DA  +F + + + +P+ W  M++G  QN    +AL+ +
Sbjct: 662  SYDDEFLAISLIGMYYNSRKLEDASFLFSEFTKLNSPVLWTAMISGNIQNDCGEEALIGY 721

Query: 354  KDMARALVPLDDYALSTVLTSCGRLSDLKLG 446
            + M +  V  D    ++ L +C  L+ ++ G
Sbjct: 722  QKMRKFNVMPDQATFASALKACSTLASMQDG 752



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
 Frame = +3

Query: 9   YARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTRKE---GLGIHTKVMKMGF 179
           Y+R G     +N ++ F  M   G  P+  +++ +L +     E   G  +H  V+K GF
Sbjct: 137 YSRNGL---LENVVEAFGSMWNSGVWPNQFSYAIVLSACARLVEVEIGKQVHCSVVKTGF 193

Query: 180 QDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKD 359
           + + F    L+ MYA+ G + DAR++FD       +SW  M++   Q    + A+ VF++
Sbjct: 194 EFDSFTEGSLIDMYAKCGYLIDARRIFDGAVEPDNVSWTAMISAYIQVGLPQKAMEVFEE 253

Query: 360 M-ARALVPLDDYALSTVLTSCGRLSDLKLGAQ 452
           M  R  VP D  A  T++ +C  L  L    Q
Sbjct: 254 MQERGCVP-DQVASVTIINACVGLGRLDAARQ 284


>ref|XP_006857845.1| hypothetical protein AMTR_s00069p00058270 [Amborella trichopoda]
           gi|548861947|gb|ERN19312.1| hypothetical protein
           AMTR_s00069p00058270 [Amborella trichopoda]
          Length = 321

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 48/146 (32%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
 Frame = +3

Query: 24  EKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMGFQDNVF 194
           + ++C  A ++F  MQ  G + +  TF SIL +   L++++ GL +H  V++ GF  NVF
Sbjct: 94  QNAECQKAAEIFCEMQMAGVKSNQFTFPSILSACAALRSKELGLQVHASVLQTGFSINVF 153

Query: 195 VMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARAL 374
           V + L+ MY++  ++  A++V D M++   +SW  ++ G T +  + +AL +F +M  A 
Sbjct: 154 VQSALIDMYSKCDDLASAQRVLDGMAVADEVSWNSLL-GYTHHGLHEEALKLFCEMRIAR 212

Query: 375 VPLDDYALSTVLTSCGRLSDLKLGAQ 452
           V  D++ +++ L++C  LS L+LG Q
Sbjct: 213 VKPDEFVIASALSACAGLSVLELGQQ 238



 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
 Frame = +3

Query: 48  IQLFMRMQKFGFEPSAMTFSSILP-----SLKTRKEGLGIHTKVMKMGFQDNVFVMTGLV 212
           +++F RMQ  G  P   TF  +L      S+ TR E   +H   +K     NVFV+TGLV
Sbjct: 1   MEMFYRMQLDGLRPDQYTFGGVLRACAAGSVVTRGEQ--VHAYTIKTSLDMNVFVVTGLV 58

Query: 213 TMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPLDDY 392
            MYA+  +IG AR +FD    +  + W  M+ G TQN E + A  +F +M  A V  + +
Sbjct: 59  DMYAKCKKIGCARYLFDNNPERNMVLWTAMLTGHTQNAECQKAAEIFCEMQMAGVKSNQF 118

Query: 393 ALSTVLTSCGRLSDLKLGAQ 452
              ++L++C  L   +LG Q
Sbjct: 119 TFPSILSACAALRSKELGLQ 138



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMG 176
           GY   G   +   A++LF  M+    +P     +S L +   L   + G   H   +++G
Sbjct: 191 GYTHHGLHEE---ALKLFCEMRIARVKPDEFVIASALSACAGLSVLELGQQFHAIFVRLG 247

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
           F  ++ +   LVTMYA+ G I DA  VFD M I+  +SW  ++ G  QN   +DAL +++
Sbjct: 248 FGSSLSIDNSLVTMYAKCGCIEDAHLVFDLMLIRDVVSWTALIVGYAQNGRGKDALSLYE 307

Query: 357 DM 362
            M
Sbjct: 308 QM 309


>ref|XP_003573696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18520-like [Brachypodium distachyon]
          Length = 618

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 48/141 (34%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
 Frame = +3

Query: 39  DNAIQLFMRMQKFGFEPSAMTFSSILPSLKTRKE---GLGIHTKVMKMGFQDNVFVMTGL 209
           D A+++F  M   G+ P+  T  SIL +    K    G  +H  ++K  ++D++ V + L
Sbjct: 264 DKALEMFSVMVSEGYYPNEFTVCSILKACSDEKAFRFGKQLHGAIVKKLYKDDIHVGSAL 323

Query: 210 VTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPLDD 389
           VTMYAR GE+ DA+ VFDKM+ +  I+W  M++G  Q+     A+L+F++M    V +++
Sbjct: 324 VTMYARLGEVFDAQAVFDKMARRNTITWTSMISGYAQSGHGEKAILLFQNMKMRRVSINN 383

Query: 390 YALSTVLTSCGRLSDLKLGAQ 452
             +  +L++CG +  L+LG +
Sbjct: 384 LTIVGLLSACGSIQSLRLGKE 404



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
 Frame = +3

Query: 78  GFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMGFQDNVFVMTGLVTMYARFGEIGDA 248
           G +P+  T+SS L +   L+  ++G  IH  V K     NVFV + L+ MY R G + DA
Sbjct: 479 GVKPNTYTYSSALKACAKLEALQDGRRIHGVVNKTPAFLNVFVGSSLIDMYMRCGNVDDA 538

Query: 249 RQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPLDDYALSTVLTSCGRL 428
           R+VFD M     ++WK ++ G  QN    +A      M +    +DD+ LS VLTSCG L
Sbjct: 539 RRVFDAMPEHNLVTWKVIITGFAQNGLCEEAFKYMYLMQQEGHDVDDFVLSKVLTSCGDL 598



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 38/122 (31%), Positives = 63/122 (51%)
 Frame = +3

Query: 87  PSAMTFSSILPSLKTRKEGLGIHTKVMKMGFQDNVFVMTGLVTMYARFGEIGDARQVFDK 266
           P A   +S+L S  +  +   +H   ++      +FV   L+  YARF EI DAR+VFD+
Sbjct: 82  PDAEALASLLRSCGSVDDVRRVHAISVRSPDGPGMFVANNLINAYARFHEISDARKVFDE 141

Query: 267 MSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPLDDYALSTVLTSCGRLSDLKLG 446
           M  ++ +SW  ++ G  ++  Y + + +F DM  + V  +      +L SCG   + KLG
Sbjct: 142 MPDKSVVSWTAIINGYQKSGNYNEVVRLFLDMVGSGVRGNSLTFVCLLKSCGEQCNTKLG 201

Query: 447 AQ 452
            Q
Sbjct: 202 RQ 203



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTR---KEGLGIHTKVMKMG 176
           GY + G  ++    ++LF+ M   G   +++TF  +L S   +   K G  +H  V+K G
Sbjct: 156 GYQKSGNYNE---VVRLFLDMVGSGVRGNSLTFVCLLKSCGEQCNTKLGRQVHCCVVKGG 212

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
           +  NV + + +V  YA+ G I  A  +FDKM+ +  ISW  M+    Q+     AL +F 
Sbjct: 213 WS-NVIMDSAVVHFYAQCGHIASASTMFDKMASRDVISWTTMITAYVQHGRGDKALEMFS 271

Query: 357 DMARALVPLDDYALSTVLTSCGRLSDLKLGAQ 452
            M       +++ + ++L +C      + G Q
Sbjct: 272 VMVSEGYYPNEFTVCSILKACSDEKAFRFGKQ 303



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILP---SLKTRKEGLGIHTKVMKMG 176
           GYA+ G     + AI LF  M+      + +T   +L    S+++ + G  +H +++K  
Sbjct: 357 GYAQSGHG---EKAILLFQNMKMRRVSINNLTIVGLLSACGSIQSLRLGKELHAQIIKNS 413

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
            Q+N+ + + LV  Y + GE   A ++   M  +  ISW  M++G        +AL    
Sbjct: 414 IQENLQIGSTLVWCYCKCGEYTYAARILKDMPDRDAISWTAMISGYNSVGHNAEALKSLD 473

Query: 357 DMARALVPLDDYALSTVLTSCGRLSDLKLG 446
           DM    V  + Y  S+ L +C +L  L+ G
Sbjct: 474 DMLWDGVKPNTYTYSSALKACAKLEALQDG 503


>ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319442|gb|EFH49864.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 750

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 3/146 (2%)
 Frame = +3

Query: 24  EKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTRKE---GLGIHTKVMKMGFQDNVF 194
           E+   D A+ LF RM + G +P +  ++++L SL   +    G  IH  V++ G   N  
Sbjct: 159 EQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNAS 218

Query: 195 VMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARAL 374
           + TG+V MY + G +  A++VFD+M+++ P++W  ++ G TQ    RDAL +F D+    
Sbjct: 219 IETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEG 278

Query: 375 VPLDDYALSTVLTSCGRLSDLKLGAQ 452
           V  D +  S VL +C  L +L+ G Q
Sbjct: 279 VEWDSFVFSVVLKACASLEELRFGKQ 304



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILP---SLKTRKEGLGIHTKVMKMG 176
           GY + G   D   A++LF+ +   G E  +  FS +L    SL+  + G  IH  V K+G
Sbjct: 257 GYTQAGRARD---ALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLG 313

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
            +  V V T LV  Y +      A + F ++     +SW  +++G  Q  ++ +A+  FK
Sbjct: 314 LECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFK 373

Query: 357 DM-ARALVPLDDYALSTVLTSCGRLSDLKLGAQ 452
            + ++  V L+ +  +++  +C  L+D  +G Q
Sbjct: 374 SLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQ 406


>ref|XP_004237761.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Solanum lycopersicum]
          Length = 1021

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 55/152 (36%), Positives = 85/152 (55%), Gaps = 3/152 (1%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMG 176
           GYA+ G  S C   ++LF  M+   FE    T++SIL +   L+  + G  +H+ ++K  
Sbjct: 404 GYAQNG--SAC-KVVELFRSMRLSTFETDEYTYTSILSACACLEDVEMGRQLHSIIIKNK 460

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
           F  N+FV   L+ MYA+ G +GDARQ FDKM  +  ISW  ++ G  Q+ E  +A  +F 
Sbjct: 461 FASNLFVGNALIDMYAKCGALGDARQQFDKMLTRDHISWNAIIVGYVQDEEEEEAFNMFH 520

Query: 357 DMARALVPLDDYALSTVLTSCGRLSDLKLGAQ 452
            M    +  D+  L++VL++C  + DL  G Q
Sbjct: 521 KMTLERIIPDEACLASVLSACANIHDLNKGKQ 552



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 43/152 (28%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILP---SLKTRKEGLGIHTKVMKMG 176
           G+A+ G++ +   AIQ F  M K    P+  T  S+L    S+     GL +H   +K G
Sbjct: 303 GHAKGGKEVE---AIQFFQDMIKASIRPTRSTLGSVLSATASVANLSFGLQVHAVAVKQG 359

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
            + NV+V + L+ MYA+  ++  A ++F+ +  +  + W  ++AG  QN      + +F+
Sbjct: 360 LESNVYVGSSLINMYAKCQKMEAASEIFNSLGEKNEVLWNALLAGYAQNGSACKVVELFR 419

Query: 357 DMARALVPLDDYALSTVLTSCGRLSDLKLGAQ 452
            M  +    D+Y  +++L++C  L D+++G Q
Sbjct: 420 SMRLSTFETDEYTYTSILSACACLEDVEMGRQ 451



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
 Frame = +3

Query: 36   CDNAIQLFMRMQKFGFEPSAMTFSSILPSLKT---RKEGLGIHTKVMKMGFQDNVFVMTG 206
            C+ A+  +  M+KF   P   TF+S L +  T    ++G  IH  +   GF  +    + 
Sbjct: 714  CEEALIGYQEMRKFNVMPDQATFASALKACSTLAFMQDGRKIHCLIFHTGFDMDELTSSS 773

Query: 207  LVTMYARFGEIGDARQVFDKM-SIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPL 383
            L+ MYA+ G++  + QVF +M S +  ISW  M+ G  +N    DAL VF++M RA V  
Sbjct: 774  LIDMYAKCGDVKCSVQVFSEMVSKKDIISWNSMIVGFAKNGFAEDALEVFEEMKRASVKP 833

Query: 384  DDYALSTVLTSCGRLSDLKLGAQ 452
            DD     VLT+C     +  G Q
Sbjct: 834  DDITFLGVLTACSHAGMVSEGRQ 856



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 45/151 (29%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
 Frame = +3

Query: 6    GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTRKEGLG--IHTKVMKMGF 179
            GYA++    + + A+ LF  M   G  PS +TF+SIL +       LG  +H+ ++K+GF
Sbjct: 606  GYAQK----NINYAVHLFHNMLVEGLRPSEVTFASILDACSDHAYMLGRQLHSFILKLGF 661

Query: 180  QDN-VFVMTGLVTMYARFGEIGDARQVFDKMS-IQTPISWKEMVAGLTQNREYRDALLVF 353
              N  F+   L+ MY   G++ DA  +F + + + +P+ W  M++G  QN    +AL+ +
Sbjct: 662  SYNDEFLAISLIGMYYDSGKLEDASFLFSEFTKLNSPVLWTAMISGNIQNDCCEEALIGY 721

Query: 354  KDMARALVPLDDYALSTVLTSCGRLSDLKLG 446
            ++M +  V  D    ++ L +C  L+ ++ G
Sbjct: 722  QEMRKFNVMPDQATFASALKACSTLAFMQDG 752



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
 Frame = +3

Query: 9   YARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTRKE---GLGIHTKVMKMGF 179
           Y+R G     +N ++ F  M   G  P+  +++ +L +     E   G  +H  V+K GF
Sbjct: 137 YSRNGL---LENVVEAFGSMWNSGVWPNQFSYAIVLSACARLVEVEIGKQVHCSVVKTGF 193

Query: 180 QDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKD 359
           + + F    L+ MYA+ G + DAR++FD       +SW  M++   Q    + A+ VF++
Sbjct: 194 EFDSFTEGSLIDMYAKCGYLIDARRIFDGAVEPDNVSWTAMISAYIQVGLPQKAMEVFEE 253

Query: 360 M-ARALVPLDDYALSTVLTSCGRLSDLKLGAQ 452
           M  R  VP D  A  T++ +C  L  L    Q
Sbjct: 254 MQERGCVP-DQVASVTIINACVGLGRLDAARQ 284


>gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 52/141 (36%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTR---KEGLGIHTKVMKMG 176
           GYA+ G     D AI LF RMQ+ G +P  MTF+S L S  +    +EG  IH +++  G
Sbjct: 373 GYAQLGFH---DEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAG 429

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
           +  +V++ + LV+MYA+ G + DAR VF++MS +  ++W  M+ G  Q+   R+AL  F+
Sbjct: 430 YSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFE 489

Query: 357 DMARALVPLDDYALSTVLTSC 419
            M +  +  D    ++VL++C
Sbjct: 490 QMKKQGIKPDKVTFTSVLSAC 510



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 42/150 (28%), Positives = 83/150 (55%), Gaps = 3/150 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTR---KEGLGIHTKVMKMG 176
           GYA++G+    D A++L  +MQ+    P+ +T++SIL    T    + G  +H  +++ G
Sbjct: 272 GYAQQGQ---VDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSG 328

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
           +   ++V+  L+TMY + G + +AR++F  +  +  ++W  MV G  Q   + +A+ +F+
Sbjct: 329 YGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFR 388

Query: 357 DMARALVPLDDYALSTVLTSCGRLSDLKLG 446
            M +  +  D    ++ LTSC   + L+ G
Sbjct: 389 RMQQQGIKPDKMTFTSALTSCSSPAFLQEG 418



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
 Frame = +3

Query: 45  AIQLFMRMQKFGFEPSAMTFSSILPSL---KTRKEGLGIHTKVMKMGFQDNVFVMTGLVT 215
           A + +  M+  G +P  +TF S+L +    +  + G  +H ++ K G +    V T LV 
Sbjct: 181 AYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVG 240

Query: 216 MYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPLDDYA 395
           MYA+ G+I  A+ +FDK+  +  ++W  ++AG  Q  +   AL + + M +A V  +   
Sbjct: 241 MYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKIT 300

Query: 396 LSTVLTSC 419
            +++L  C
Sbjct: 301 YTSILQGC 308


>ref|XP_006406039.1| hypothetical protein EUTSA_v10020184mg [Eutrema salsugineum]
           gi|557107185|gb|ESQ47492.1| hypothetical protein
           EUTSA_v10020184mg [Eutrema salsugineum]
          Length = 694

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 56/152 (36%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTRKE---GLGIHTKVMKMG 176
           GYA+ G     +NA++L   M      P A T SS+LP      +   G  IH  V++ G
Sbjct: 205 GYAQSGMY---ENALRLVREMGSNDLSPDAFTLSSVLPIFSEYVDVIKGKEIHGYVIRKG 261

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
              +V++ + LV MYA+   I D+ +VF  +S +  ISW  +VAG  QN  Y +A+ +F+
Sbjct: 262 IDADVYIGSSLVDMYAKSARIEDSERVFSHLSCRDSISWNSLVAGYVQNGRYNEAVRLFR 321

Query: 357 DMARALVPLDDYALSTVLTSCGRLSDLKLGAQ 452
            M  A V     A S+VL +C  LS L LG Q
Sbjct: 322 QMVNAKVRPGPVAFSSVLPACAHLSTLTLGKQ 353



 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 46/144 (31%), Positives = 81/144 (56%), Gaps = 3/144 (2%)
 Frame = +3

Query: 6   GYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMG 176
           GY + G  ++   A++LF +M      P  + FSS+LP+   L T   G  +H  V++ G
Sbjct: 306 GYVQNGRYNE---AVRLFRQMVNAKVRPGPVAFSSVLPACAHLSTLTLGKQLHGYVLRGG 362

Query: 177 FQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFK 356
           + DN+F+ + LV MY++ G I  AR++FD+M++   +SW  ++ G   +   R+A+ +F+
Sbjct: 363 YSDNIFIASALVDMYSKCGNIKAARKIFDRMNLHDEVSWTAIIMGHALHGHGREAISLFE 422

Query: 357 DMARALVPLDDYALSTVLTSCGRL 428
           +M    V  +  A   VLT+C  +
Sbjct: 423 EMKLQGVKPNHVAFVAVLTACSHV 446


>ref|XP_004506883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cicer arietinum]
          Length = 881

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 55/153 (35%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
 Frame = +3

Query: 3   GGYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKM 173
           GGYA+ G     D A+ L+ RM   G  P   TF  +L +   +    +G  IH  V++ 
Sbjct: 180 GGYAKGGF---FDEALGLYERMLWVGVRPDVYTFPCVLRTCGGVPDLVKGREIHVHVLRF 236

Query: 174 GFQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVF 353
           GF+ +V V+  L+TMY + G+IG+AR VFDKM  +  ISW  M+AG  +N +  + + +F
Sbjct: 237 GFESDVDVVNALITMYVKCGDIGNARLVFDKMPSRDRISWNAMIAGYFENGDCFEGMRLF 296

Query: 354 KDMARALVPLDDYALSTVLTSCGRLSDLKLGAQ 452
             M    V  D   +++V+T+C  + D +LG Q
Sbjct: 297 CRMIEHPVEPDLMTMTSVITACELIGDDRLGRQ 329



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
 Frame = +3

Query: 24  EKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPSLKTRKE---GLGIHTKVMKMGFQDNVF 194
           E  DC   ++LF RM +   EP  MT +S++ + +   +   G  IH  V +  F     
Sbjct: 285 ENGDCFEGMRLFCRMIEHPVEPDLMTMTSVITACELIGDDRLGRQIHGYVTRTEFAKEPS 344

Query: 195 VMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARAL 374
           V T L+ MY+  G + +A +VF +   +  +SW  M++G   N  +R A+  +K M    
Sbjct: 345 VYTSLIQMYSSVGLVEEAEKVFSQTECRDVVSWTAMISGYENNLMHRKAVETYKMMELEG 404

Query: 375 VPLDDYALSTVLTSCGRLSDLKLG 446
           +  D+  ++ VL++C  L DL +G
Sbjct: 405 IVPDEITIAVVLSACSCLCDLDMG 428



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
 Frame = +3

Query: 45  AIQLFMRMQKFGFEPSAMTFSSILPSLKTRKE---GLGIHTKVMKMGFQDNVFVMTGLVT 215
           A++ +  M+  G  P  +T + +L +     +   G+ +H    K G      V   L+ 
Sbjct: 393 AVETYKMMELEGIVPDEITIAVVLSACSCLCDLDMGMKLHEAAKKTGLVSYAIVANTLID 452

Query: 216 MYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPLDDYA 395
           MYA+   I  A +VF  +  +  ISW  ++ GL  N    +AL  F++M R   P +   
Sbjct: 453 MYAKCKYIDKALEVFYSIRDKNIISWTSIILGLRINNRCFEALFFFREMTRRQKP-NSVT 511

Query: 396 LSTVLTSCGRLSDLKLGAQ 452
           L  VL++C R+  L  G +
Sbjct: 512 LVCVLSACARIGALTCGKE 530



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
 Frame = +3

Query: 126 KTRKEGLGIHTKVMKMGFQDNVFVMTG--LVTMYARFGEIGDARQVFDKMSIQTPISWKE 299
           + RKEG  ++  V K     ++ +  G  L++M+ RFG + DA  VF KM  +   SW  
Sbjct: 118 RARKEGSKVYFYVKKSTMMTHLSLELGNALLSMFVRFGNLVDAWYVFGKMLERNLFSWNV 177

Query: 300 MVAGLTQNREYRDALLVFKDMARALVPLDDYALSTVLTSCGRLSDLKLGAQ 452
           +V G  +   + +AL +++ M    V  D Y    VL +CG + DL  G +
Sbjct: 178 LVGGYAKGGFFDEALGLYERMLWVGVRPDVYTFPCVLRTCGGVPDLVKGRE 228


>gb|EXC45444.1| hypothetical protein L484_000697 [Morus notabilis]
          Length = 880

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 3/151 (1%)
 Frame = +3

Query: 3   GGYARRGEKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKM 173
           GGYA+ G     D A+ L+ RM   G  P   TF  +L +   +     G  IH  V++ 
Sbjct: 176 GGYAKAGF---FDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGVPDLARGREIHVHVVRF 232

Query: 174 GFQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVF 353
           GF+ +V V+  L+TMY + G+IG+AR VFD+M  +  ISW  M+AG  +N E  +   +F
Sbjct: 233 GFESDVDVLNALITMYTKCGDIGNARLVFDRMPRRDRISWNAMIAGYFENEECLEGFRLF 292

Query: 354 KDMARALVPLDDYALSTVLTSCGRLSDLKLG 446
             M R  +  D   +++++++C  L D +LG
Sbjct: 293 LMMQRFSIVPDLMTMTSLISACELLGDDRLG 323



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
 Frame = +3

Query: 24  EKSDCDNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMGFQDNVF 194
           E  +C    +LF+ MQ+F   P  MT +S++ +   L   + G  IH  V+K  F D+V 
Sbjct: 281 ENEECLEGFRLFLMMQRFSIVPDLMTMTSLISACELLGDDRLGKAIHGYVIKTDFGDDVS 340

Query: 195 VMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARAL 374
           V   LV MY+  G + +A +VF +M  +  +SW  MV+G   N     A+  +K M    
Sbjct: 341 VDNSLVQMYSSIGYLEEAEKVFSRMESKDVMSWTAMVSGYDHNELPDKAVETYKTMELQG 400

Query: 375 VPLDDYALSTVLTSCGRLSDLKLG 446
           V  D+  +++VLT+C  L  L +G
Sbjct: 401 VIPDEITIASVLTACACLGHLDMG 424



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
 Frame = +3

Query: 39  DNAIQLFMRMQKFGFEPSAMTFSSILPS---LKTRKEGLGIHTKVMKMGFQDNVFVMTGL 209
           D A++ +  M+  G  P  +T +S+L +   L     GL +H   ++      V V   L
Sbjct: 387 DKAVETYKTMELQGVIPDEITIASVLTACACLGHLDMGLKLHELAIRTRLISYVIVANTL 446

Query: 210 VTMYARFGEIGDARQVFDKMSIQTPISWKEMVAGLTQNREYRDALLVFKDMARALVPLDD 389
           + MY++   +  A +VF ++  +  ISW  ++ GL  N    DAL+ F+ M + LV  + 
Sbjct: 447 IDMYSKCKCVDKALEVFHRIPEKNIISWTSIILGLRINNRCFDALIYFRKM-KQLVKPNS 505

Query: 390 YALSTVLTSCGRLSDLKLGAQ 452
             L +VL++C R+  L  G +
Sbjct: 506 VTLVSVLSACARIGALMAGKE 526



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/109 (29%), Positives = 55/109 (50%)
 Frame = +3

Query: 126 KTRKEGLGIHTKVMKMGFQDNVFVMTGLVTMYARFGEIGDARQVFDKMSIQTPISWKEMV 305
           + R+EG  +H+ V K     +V +   L++M+ RFG + DA  VF +M  +   SW  ++
Sbjct: 116 RAREEGARVHSYVSKSITHLSVRLGNALLSMFVRFGNLVDAWYVFGRMEERNVFSWNVLL 175

Query: 306 AGLTQNREYRDALLVFKDMARALVPLDDYALSTVLTSCGRLSDLKLGAQ 452
            G  +   + +AL ++  M    +  D Y    VL +CG + DL  G +
Sbjct: 176 GGYAKAGFFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGVPDLARGRE 224