BLASTX nr result

ID: Ephedra25_contig00028971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00028971
         (655 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304894.2| hypothetical protein POPTR_0003s21870g [Popu...    58   3e-06
ref|XP_006373760.1| hypothetical protein POPTR_0016s04800g [Popu...    57   4e-06
ref|XP_006373759.1| hypothetical protein POPTR_0016s04800g [Popu...    57   4e-06

>ref|XP_002304894.2| hypothetical protein POPTR_0003s21870g [Populus trichocarpa]
           gi|550343732|gb|EEE79873.2| hypothetical protein
           POPTR_0003s21870g [Populus trichocarpa]
          Length = 421

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 28/191 (14%)
 Frame = -1

Query: 598 MKADAYKNMLWAIRMDAHKINYSLELAIEEIKKTLNVSDARHDQIIQELDGE-------- 443
           ++ +AY ++L A +  +  I +  E  I E++K L VSD  H +++  ++ +        
Sbjct: 57  IEQEAYTSVLRAFKAQSDAITWEKESLITELRKELRVSDEEHRELLARVNADDIIRRIRE 116

Query: 442 ---------SGPEDTMLP----ASPAPPG----QDGRSPGRQDTSEGDDSHPDSPPHGAD 314
                    S P  T       ASP+  G    Q       Q  S G         HG+ 
Sbjct: 117 WRKANGIQPSMPSTTQPSHNPIASPSASGSRKKQKTSQSSMQQCSTGLSGRAQVANHGSS 176

Query: 313 IADVRYGRDLVGKFVNIRWHDRNQVKASIVIDYDDANGSHFLYH---PEDKQHEWLDLNK 143
            A      DL+GK V   W + N    +++ DY+   G H L +     D+  EW++L +
Sbjct: 177 GAFA--ANDLIGKKVWTLWPEDNHYYEAVITDYNAVEGRHALVYDINTGDETWEWVNLKE 234

Query: 142 LLPSDISINEE 110
           + P DI   +E
Sbjct: 235 ISPEDIRWEDE 245


>ref|XP_006373760.1| hypothetical protein POPTR_0016s04800g [Populus trichocarpa]
           gi|550320851|gb|ERP51557.1| hypothetical protein
           POPTR_0016s04800g [Populus trichocarpa]
          Length = 363

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 24/182 (13%)
 Frame = -1

Query: 598 MKADAYKNMLWAIRMDAHKINYSLELAIEEIKKTLNVSDARH---------DQIIQ---- 458
           ++ +AY+ +L A +  + ++++  E  I E++K L VSD  H         D IIQ    
Sbjct: 56  LEQEAYRAVLRAFKAQSDQLSWDKEGLITELRKELRVSDDEHREILTLVNRDDIIQKIRE 115

Query: 457 --ELDGESGP----EDTMLPASPAPPGQDGRSPGRQDTSEGDDSHPDSPPHGADIAD--V 302
             E  G+  P      ++    P+P     R   +Q T      +P  PP      +   
Sbjct: 116 WREAGGQRAPRLNASQSVHDVFPSPTVSASRK--KQKTFL---MYPTGPPRNQHFTNHGS 170

Query: 301 RYGRDLVGKFVNIRWHDRNQVKASIVIDYDDANGSHFLYH---PEDKQHEWLDLNKLLPS 131
            Y    +GK V  RW + N    +++  Y+   G H L +    E++  EW+DLN++ P 
Sbjct: 171 AYDDKEIGKEVWTRWPEDNNFYKAVITRYNPTEGRHALVYDMNTENETWEWVDLNEMAPE 230

Query: 130 DI 125
           DI
Sbjct: 231 DI 232


>ref|XP_006373759.1| hypothetical protein POPTR_0016s04800g [Populus trichocarpa]
           gi|550320850|gb|ERP51556.1| hypothetical protein
           POPTR_0016s04800g [Populus trichocarpa]
          Length = 329

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 24/182 (13%)
 Frame = -1

Query: 598 MKADAYKNMLWAIRMDAHKINYSLELAIEEIKKTLNVSDARH---------DQIIQ---- 458
           ++ +AY+ +L A +  + ++++  E  I E++K L VSD  H         D IIQ    
Sbjct: 56  LEQEAYRAVLRAFKAQSDQLSWDKEGLITELRKELRVSDDEHREILTLVNRDDIIQKIRE 115

Query: 457 --ELDGESGP----EDTMLPASPAPPGQDGRSPGRQDTSEGDDSHPDSPPHGADIAD--V 302
             E  G+  P      ++    P+P     R   +Q T      +P  PP      +   
Sbjct: 116 WREAGGQRAPRLNASQSVHDVFPSPTVSASRK--KQKTFL---MYPTGPPRNQHFTNHGS 170

Query: 301 RYGRDLVGKFVNIRWHDRNQVKASIVIDYDDANGSHFLYH---PEDKQHEWLDLNKLLPS 131
            Y    +GK V  RW + N    +++  Y+   G H L +    E++  EW+DLN++ P 
Sbjct: 171 AYDDKEIGKEVWTRWPEDNNFYKAVITRYNPTEGRHALVYDMNTENETWEWVDLNEMAPE 230

Query: 130 DI 125
           DI
Sbjct: 231 DI 232


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