BLASTX nr result
ID: Ephedra25_contig00028758
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00028758
(967 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002961618.1| hypothetical protein SELMODRAFT_77427 [Selag... 65 5e-08
ref|XP_002964690.1| hypothetical protein SELMODRAFT_82644 [Selag... 64 1e-07
gb|ABK24371.1| unknown [Picea sitchensis] 63 2e-07
gb|ACH72675.1| RAD23 [Pinus sylvestris var. mongolica] 62 4e-07
ref|XP_006385947.1| hypothetical protein POPTR_0003s18540g [Popu... 60 1e-06
gb|ACN40029.1| unknown [Picea sitchensis] 60 2e-06
ref|XP_003529480.1| PREDICTED: ubiquitin receptor RAD23b-like is... 59 2e-06
ref|XP_004303217.1| PREDICTED: putative DNA repair protein RAD23... 59 3e-06
gb|EMJ16752.1| hypothetical protein PRUPE_ppa007284mg [Prunus pe... 59 3e-06
ref|XP_004147454.1| PREDICTED: putative DNA repair protein RAD23... 59 3e-06
gb|ESW07843.1| hypothetical protein PHAVU_010G163300g [Phaseolus... 58 5e-06
ref|XP_003543713.1| PREDICTED: ubiquitin receptor RAD23b-like is... 58 5e-06
ref|XP_002303970.1| DNA repair protein RAD23 [Populus trichocarp... 58 5e-06
ref|XP_001763027.1| predicted protein [Physcomitrella patens] gi... 58 5e-06
ref|XP_002512770.1| uv excision repair protein rad23, putative [... 58 6e-06
ref|XP_002299163.1| DNA repair protein RAD23 [Populus trichocarp... 58 6e-06
ref|XP_006368664.1| hypothetical protein POPTR_0001s07510g [Popu... 58 6e-06
gb|EOY27441.1| Rad23 UV excision repair protein family isoform 2... 57 8e-06
gb|EOY27440.1| Rad23 UV excision repair protein family isoform 1... 57 8e-06
ref|NP_001240038.1| uncharacterized protein LOC100819019 [Glycin... 57 8e-06
>ref|XP_002961618.1| hypothetical protein SELMODRAFT_77427 [Selaginella moellendorffii]
gi|300170277|gb|EFJ36878.1| hypothetical protein
SELMODRAFT_77427 [Selaginella moellendorffii]
Length = 367
Score = 64.7 bits (156), Expect = 5e-08
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN---CSWECLFHQGSVLKNETRI 371
MKISVK KG+ +D+DV+P DTV+ +K ++E L+G C+ + L HQG VLK+ET +
Sbjct: 1 MKISVKTLKGNHFDLDVQPADTVIAVKKQIED-LQGKESFPCAQQLLIHQGKVLKDETTM 59
Query: 372 DDIAITDGSLLFCIPARGSIYHNMMEPVSSTCLPGS 479
D+ +++ L + + P SS P S
Sbjct: 60 DENKVSENGFLVVMLTKS----KTAAPTSSGATPSS 91
>ref|XP_002964690.1| hypothetical protein SELMODRAFT_82644 [Selaginella moellendorffii]
gi|300166923|gb|EFJ33528.1| hypothetical protein
SELMODRAFT_82644 [Selaginella moellendorffii]
Length = 385
Score = 63.5 bits (153), Expect = 1e-07
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN---CSWECLFHQGSVLKNETRI 371
MKISVK KG+ +D+DV+P DTV+ +K ++E L+G C+ + L HQG VLK+ET +
Sbjct: 1 MKISVKTLKGNHFDLDVQPADTVIAVKKQIED-LQGKESFPCAQQLLIHQGKVLKDETTM 59
Query: 372 DDIAITDGSLL 404
D+ +++ L
Sbjct: 60 DENKVSENGFL 70
>gb|ABK24371.1| unknown [Picea sitchensis]
Length = 390
Score = 62.8 bits (151), Expect = 2e-07
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN---CSWECLFHQGSVLKNETRI 371
MK+SVK KG+ ++ID +P DTV+ +K ++E I +G + C + L HQG VLK++T I
Sbjct: 1 MKLSVKTLKGNRFEIDAQPNDTVMAVKKQIEEI-QGKDTYPCGQQLLIHQGKVLKDDTTI 59
Query: 372 DDIAITDGSLL 404
+D IT+ L
Sbjct: 60 EDNQITENGFL 70
>gb|ACH72675.1| RAD23 [Pinus sylvestris var. mongolica]
Length = 390
Score = 61.6 bits (148), Expect = 4e-07
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN---CSWECLFHQGSVLKNETRI 371
MK+SVK KG+ ++I+ +P DTV+ +K ++E I +G + C + L HQG VLK++T I
Sbjct: 1 MKLSVKTLKGNRFEIEAQPNDTVMAVKKQIEEI-QGKDTYPCGQQLLIHQGKVLKDDTTI 59
Query: 372 DDIAITDGSLL 404
+D IT+ L
Sbjct: 60 EDNTITENGFL 70
>ref|XP_006385947.1| hypothetical protein POPTR_0003s18540g [Populus trichocarpa]
gi|550343468|gb|ERP63744.1| hypothetical protein
POPTR_0003s18540g [Populus trichocarpa]
Length = 372
Score = 60.1 bits (144), Expect = 1e-06
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN--CSWECLFHQGSVLKNETRID 374
MK++VK KG ++I V PTDT++ +K +E +N C + L H G VLK+ET +
Sbjct: 1 MKLTVKTLKGSHFEIKVHPTDTIMGVKKNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLA 60
Query: 375 DIAITDGSLLFCIPAR---GSIYHNMMEPVSS--TCLPGSIT----NSQLLELRSIKGSS 527
D +T+ L + ++ G+ + +PVS+ T P SI+ ++Q L+ +S S
Sbjct: 61 DNKVTEDGFLVVMLSKSKTGTAGTSSTQPVSTPPTTTPTSISTPAPDAQALDSKSASASD 120
Query: 528 A 530
+
Sbjct: 121 S 121
>gb|ACN40029.1| unknown [Picea sitchensis]
Length = 403
Score = 59.7 bits (143), Expect = 2e-06
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN--CSWECLFHQGSVLKNETRID 374
MK+SVK KG+ +DI+V+PTDTVL +K ++E + + L +QG VLK+ET I+
Sbjct: 1 MKVSVKTLKGNHFDIEVQPTDTVLNVKKQIEQVQGAQTYPSEQQLLIYQGKVLKDETTIE 60
Query: 375 DIAITDGSLL 404
+ +T+ + L
Sbjct: 61 ENKVTENTFL 70
>ref|XP_003529480.1| PREDICTED: ubiquitin receptor RAD23b-like isoform 1 [Glycine max]
Length = 363
Score = 59.3 bits (142), Expect = 2e-06
Identities = 32/103 (31%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN--CSWECLFHQGSVLKNETRID 374
MK++VK KG ++I V+P+DTV+ +K +E + +N C + L H G VLK+ET +
Sbjct: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 375 DIAITDGSLLFCIPAR----GSIYHNMMEPVSSTCLPGSITNS 491
+ +++ L + ++ GS + ++P S+ S++NS
Sbjct: 61 ENKVSEDGFLVVMLSKSKTSGSAAASSVQPASNPATTVSMSNS 103
>ref|XP_004303217.1| PREDICTED: putative DNA repair protein RAD23-1-like [Fragaria vesca
subsp. vesca]
Length = 371
Score = 58.9 bits (141), Expect = 3e-06
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN--CSWECLFHQGSVLKNETRID 374
MK++VK KG ++I V+PTDTV+ +K +E I +N C + L H G VLK+ET +
Sbjct: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 375 DIAITDGSLL 404
D +T+ L
Sbjct: 61 DNKVTEDGFL 70
>gb|EMJ16752.1| hypothetical protein PRUPE_ppa007284mg [Prunus persica]
Length = 374
Score = 58.9 bits (141), Expect = 3e-06
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN--CSWECLFHQGSVLKNETRID 374
MK++VK KG ++I V+PTDTV+ +K +E + +N C + L H G VLK+ET +
Sbjct: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
Query: 375 DIAITDGSLL 404
D +T+ L
Sbjct: 61 DNKVTEDGFL 70
>ref|XP_004147454.1| PREDICTED: putative DNA repair protein RAD23-1-like [Cucumis
sativus]
Length = 374
Score = 58.9 bits (141), Expect = 3e-06
Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN--CSWECLFHQGSVLKNETRID 374
MK++VK KG + I+V+PTDTVL +K +E++ ++ CS + L H G VLK+ET +
Sbjct: 1 MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIENVQGKDSYPCSQQLLIHNGKVLKDETTLT 60
Query: 375 DIAITDGSLL 404
+ IT+ L
Sbjct: 61 ENKITEDGFL 70
>gb|ESW07843.1| hypothetical protein PHAVU_010G163300g [Phaseolus vulgaris]
Length = 371
Score = 58.2 bits (139), Expect = 5e-06
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN--CSWECLFHQGSVLKNETRID 374
MK++VK KG ++I V+P+DTV+ +K +E + +N C + L H G VLK+ET +
Sbjct: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 375 DIAITDGSLLFCI----PARGSIYHNMMEPVSSTCLPGSITNS 491
D +++ L + A GS ++P S+ S +N+
Sbjct: 61 DNKVSEDGFLVVMLSKSKASGSAAAPSVQPASTPASTVSTSNT 103
>ref|XP_003543713.1| PREDICTED: ubiquitin receptor RAD23b-like isoform 1 [Glycine max]
Length = 367
Score = 58.2 bits (139), Expect = 5e-06
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN--CSWECLFHQGSVLKNETRID 374
MK++VK KG ++I V+P+DT++ +K +E + +N C + L H G VLK+ET +
Sbjct: 1 MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLS 60
Query: 375 DIAITDGSLLFCIPARG 425
D +++ L + ++G
Sbjct: 61 DNKVSEDGFLVVMLSKG 77
>ref|XP_002303970.1| DNA repair protein RAD23 [Populus trichocarpa]
gi|222841402|gb|EEE78949.1| DNA repair protein RAD23
[Populus trichocarpa]
Length = 358
Score = 58.2 bits (139), Expect = 5e-06
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN--CSWECLFHQGSVLKNETRID 374
MK++VK KG ++I V PTDT++ +K +E +N C + L H G VLK+ET +
Sbjct: 1 MKLTVKTLKGSHFEIKVHPTDTIMGVKKNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLA 60
Query: 375 DIAITDGSLLFCIPAR---GSIYHNMMEPVSS--TCLPGSIT 485
D +T+ L + ++ G+ + +PVS+ T P SI+
Sbjct: 61 DNKVTEDGFLVVMLSKSKTGTAGTSSTQPVSTPPTTTPTSIS 102
>ref|XP_001763027.1| predicted protein [Physcomitrella patens]
gi|162685839|gb|EDQ72232.1| predicted protein
[Physcomitrella patens]
Length = 370
Score = 58.2 bits (139), Expect = 5e-06
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN--CSWECLFHQGSVLKNETRID 374
MKISVK KG+ +D++V P DTVL +K ++E + CS + L HQG VLK+ET ++
Sbjct: 1 MKISVKTLKGNHFDLEVSPADTVLNVKRQIEDSQGKESFPCSQQLLIHQGKVLKDETTME 60
Query: 375 DIAITDGSLLFCIPARGSIYHNMMEPVSS 461
+ +++ + + + P SS
Sbjct: 61 ENKVSENGFVVVMLTKAKTGAGASPPSSS 89
>ref|XP_002512770.1| uv excision repair protein rad23, putative [Ricinus communis]
gi|223547781|gb|EEF49273.1| uv excision repair protein
rad23, putative [Ricinus communis]
Length = 359
Score = 57.8 bits (138), Expect = 6e-06
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN--CSWECLFHQGSVLKNETRID 374
MK++VK KG ++I V+P DTV+ +K +E + +N C + L H G VLK+ET +
Sbjct: 1 MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60
Query: 375 DIAITDGSLLFCIPAR----GSIYHNMMEPVSST 464
D +T+ L + ++ GS + +P ++T
Sbjct: 61 DNKVTEDGFLVVMLSKSKTSGSSGTSSTQPAAAT 94
>ref|XP_002299163.1| DNA repair protein RAD23 [Populus trichocarpa]
gi|222846421|gb|EEE83968.1| DNA repair protein RAD23
[Populus trichocarpa]
Length = 349
Score = 57.8 bits (138), Expect = 6e-06
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN--CSWECLFHQGSVLKNETRID 374
MK++VK KG ++I V+PTDTV+ +K +E + +N C + L H G VLK+ET +
Sbjct: 1 MKLTVKTLKGSHFEIKVQPTDTVMGVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 375 DIAITDGSLL 404
D +T+ L
Sbjct: 61 DNKVTEDGFL 70
>ref|XP_006368664.1| hypothetical protein POPTR_0001s07510g [Populus trichocarpa]
gi|118486403|gb|ABK95041.1| unknown [Populus
trichocarpa] gi|550346747|gb|ERP65233.1| hypothetical
protein POPTR_0001s07510g [Populus trichocarpa]
Length = 375
Score = 57.8 bits (138), Expect = 6e-06
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN--CSWECLFHQGSVLKNETRID 374
MK++VK KG ++I V+PTDTV+ +K +E + +N C + L H G VLK+ET +
Sbjct: 1 MKLTVKTLKGSHFEIKVQPTDTVMGVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 375 DIAITDGSLL 404
D +T+ L
Sbjct: 61 DNKVTEDGFL 70
>gb|EOY27441.1| Rad23 UV excision repair protein family isoform 2, partial
[Theobroma cacao]
Length = 303
Score = 57.4 bits (137), Expect = 8e-06
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN--CSWECLFHQGSVLKNETRID 374
MK++VK KG ++I V+P DTV+ +K +E +N C + L H G VLK+ET +
Sbjct: 1 MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLA 60
Query: 375 DIAITDGSLLFCIPAR----GSIYHNMMEPVSST 464
D +++ L + ++ GS + +P SST
Sbjct: 61 DNKVSEDGFLVVMLSKSKSLGSAGTSSAQPASST 94
>gb|EOY27440.1| Rad23 UV excision repair protein family isoform 1 [Theobroma cacao]
Length = 373
Score = 57.4 bits (137), Expect = 8e-06
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN--CSWECLFHQGSVLKNETRID 374
MK++VK KG ++I V+P DTV+ +K +E +N C + L H G VLK+ET +
Sbjct: 1 MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLA 60
Query: 375 DIAITDGSLLFCIPAR----GSIYHNMMEPVSST 464
D +++ L + ++ GS + +P SST
Sbjct: 61 DNKVSEDGFLVVMLSKSKSLGSAGTSSAQPASST 94
>ref|NP_001240038.1| uncharacterized protein LOC100819019 [Glycine max]
gi|255647960|gb|ACU24437.1| unknown [Glycine max]
Length = 363
Score = 57.4 bits (137), Expect = 8e-06
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Frame = +3
Query: 201 MKISVKVFKGDIYDIDVEPTDTVLVIKNKLEHILKGNN--CSWECLFHQGSVLKNETRID 374
MK++VK KG ++I V+P+DTV+ +K +E + +N C + L H G VLK+ET +
Sbjct: 1 MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 375 DIAITDGSLLFCIPAR----GSIYHNMMEPVSSTCLPGSITNS 491
+ +++ L + ++ GS + ++P S+ S +NS
Sbjct: 61 ENKVSEDGFLVVMLSKSKTSGSAAASSVQPASNPPTTVSTSNS 103