BLASTX nr result
ID: Ephedra25_contig00028640
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra25_contig00028640 (559 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004986208.1| PREDICTED: pentatricopeptide repeat-containi... 181 1e-43 ref|XP_004233195.1| PREDICTED: pentatricopeptide repeat-containi... 176 3e-42 gb|ABR17838.1| unknown [Picea sitchensis] 176 3e-42 ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [S... 175 6e-42 gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays] 175 8e-42 emb|CBI31086.3| unnamed protein product [Vitis vinifera] 175 8e-42 ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containi... 175 8e-42 ref|XP_006353048.1| PREDICTED: pentatricopeptide repeat-containi... 171 8e-41 ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 171 8e-41 gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japo... 171 1e-40 gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Jap... 171 1e-40 ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containi... 171 1e-40 emb|CBI25349.3| unnamed protein product [Vitis vinifera] 171 1e-40 ref|XP_006422178.1| hypothetical protein CICLE_v10006927mg [Citr... 170 2e-40 ref|XP_004231209.1| PREDICTED: pentatricopeptide repeat-containi... 170 2e-40 ref|XP_006651878.1| PREDICTED: pentatricopeptide repeat-containi... 170 2e-40 gb|EOY20071.1| Pentatricopeptide repeat-containing protein, puta... 170 2e-40 ref|XP_006490200.1| PREDICTED: pentatricopeptide repeat-containi... 169 4e-40 ref|XP_006479094.1| PREDICTED: pentatricopeptide repeat-containi... 169 4e-40 ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containi... 169 4e-40 >ref|XP_004986208.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like [Setaria italica] Length = 875 Score = 181 bits (459), Expect = 1e-43 Identities = 75/153 (49%), Positives = 115/153 (75%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG++D A RVF++MPDK+ VSWN++I AYG HGL+ ++SL ++MQ GFKPDH+TFL+ Sbjct: 593 CGNLDLALRVFESMPDKNEVSWNSIIAAYGAHGLLKESVSLLYRMQEEGFKPDHVTFLTL 652 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 + +C+H+G +EG ++F+ M EY + P+MEH+AC+VDL R GKL++A I MPF+ Sbjct: 653 ISACAHAGQVEEGVRLFQCMTKEYQIAPRMEHFACMVDLYSRSGKLDQAIEFIADMPFKP 712 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 D+ +W LL ACR+H N+ +A++A+ ++ K +P Sbjct: 713 DAGIWGALLHACRVHRNVELADIASQELFKLDP 745 Score = 59.7 bits (143), Expect = 5e-07 Identities = 38/139 (27%), Positives = 73/139 (52%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG +D ++ +F M K V+WN+MI + ++G + AL LF +M G K + +T SA Sbjct: 492 CGRLDLSHYIFSEMSVKDEVTWNSMISSCAQNGEPEEALDLFRQMSMEGIKYNSVTISSA 551 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 L +C+ G +I + + + + + ++D+ G+ G L+ A + SMP + Sbjct: 552 LSACASLPAIYYGKEI-HGVIIKGPIRADIFAESALIDMYGKCGNLDLALRVFESMPDKN 610 Query: 197 DSSVWETLLSACRIHSNIR 141 + S W ++++A H ++ Sbjct: 611 EVS-WNSIIAAYGAHGLLK 628 Score = 56.2 bits (134), Expect = 5e-06 Identities = 27/61 (44%), Positives = 39/61 (63%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 C +D A+R+F +P +V+WN MI ++GL+D AL LF MQ SG +PD +T +S Sbjct: 290 CRCLDDAWRLFDLIPRDDLVTWNGMISGCVQNGLLDEALGLFCDMQRSGVRPDSVTLVSL 349 Query: 377 L 375 L Sbjct: 350 L 350 >ref|XP_004233195.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like [Solanum lycopersicum] Length = 853 Score = 176 bits (447), Expect = 3e-42 Identities = 78/162 (48%), Positives = 113/162 (69%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG+++ A+RVF M K+ VSWN++I AYG HG + L+LF M+ GF+PDH+TFL+ Sbjct: 603 CGNLEVAWRVFDLMAHKNEVSWNSIIAAYGNHGRLKDCLNLFHGMRKDGFQPDHVTFLAI 662 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 + +C HSG +EG F M +EY + P+ EHYAC+VDL GR G +EEA+G+I+SMPF Sbjct: 663 ISACGHSGRVEEGKHYFNCMTNEYGITPRTEHYACMVDLFGRAGLVEEAFGVIKSMPFAP 722 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP*PFMGFYQI 72 D+ +W TLL ACR+H N +AE+A++ +L +P G+Y + Sbjct: 723 DAGIWGTLLGACRLHGNTELAEMASEHLLSLDP-QNSGYYML 763 Score = 61.6 bits (148), Expect = 1e-07 Identities = 36/144 (25%), Positives = 75/144 (52%), Gaps = 5/144 (3%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG +D A +VF+ MP++ +V WN+MI + ++ ++A+ F +M G K D ++ SA Sbjct: 502 CGRLDLAQQVFRRMPERDVVCWNSMITSCCQNAEPELAIDFFQQMGAIGAKYDCVSISSA 561 Query: 377 LYSCS-----HSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRS 213 L +C+ H G G+ + ++ + + + ++D+ + G LE A+ + Sbjct: 562 LSACANLPALHYGKEIHGFVMKSALSSDLFV------ESALIDMYAKCGNLEVAWRVFDL 615 Query: 212 MPFEADSSVWETLLSACRIHSNIR 141 M + + S W ++++A H ++ Sbjct: 616 MAHKNEVS-WNSIIAAYGNHGRLK 638 >gb|ABR17838.1| unknown [Picea sitchensis] Length = 795 Score = 176 bits (447), Expect = 3e-42 Identities = 81/153 (52%), Positives = 111/153 (72%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG+++ A ++F+ MP++ +VSW MILAYG HG + AL+LF KMQ +G K DH+ F + Sbjct: 471 CGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAI 530 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 L +CSH+GL D+G Q F+ MK +Y L PK+EHYAC+VDLLGR G L+EA GII++M E Sbjct: 531 LTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEP 590 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 D++VW LL ACRIH NI + E AA + + +P Sbjct: 591 DANVWGALLGACRIHCNIELGEQAAKHLFELDP 623 Score = 86.3 bits (212), Expect = 5e-15 Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 4/141 (2%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG+++ AY++F+ MP K++V+WNA+I Y +HG AL+LF +MQ G KPD +S Sbjct: 370 CGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSV 429 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACI----VDLLGRVGKLEEAYGIIRSM 210 L +C+H ++G QI Y + E + VD+ + G + A + M Sbjct: 430 LPACAHFLALEQGKQI-----HGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERM 484 Query: 209 PFEADSSVWETLLSACRIHSN 147 P E D W T++ A IH + Sbjct: 485 P-EQDVVSWTTMILAYGIHGH 504 Score = 68.2 bits (165), Expect = 1e-09 Identities = 39/136 (28%), Positives = 70/136 (51%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG ++ A +VF MP + +VSWNA+I Y ++G AL+LF +MQ +G KP+ T +S Sbjct: 168 CGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSV 227 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 + C+H ++G QI + + +V++ + G + A+ + MP Sbjct: 228 MPVCAHLLALEQGKQI-HCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIR- 285 Query: 197 DSSVWETLLSACRIHS 150 D + W ++ ++S Sbjct: 286 DVASWNAIIGGYSLNS 301 Score = 68.2 bits (165), Expect = 1e-09 Identities = 41/145 (28%), Positives = 72/145 (49%), Gaps = 8/145 (5%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG+++ A+++F+ MP + + SWNA+I Y + AL+ F +MQ G KP+ +T +S Sbjct: 269 CGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSV 328 Query: 377 LYSCSHSGLSDEGWQI--------FESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGI 222 L +C+H ++G QI FES N +V++ + G + AY + Sbjct: 329 LPACAHLFALEQGQQIHGYAIRSGFESNDVVGN---------ALVNMYAKCGNVNSAYKL 379 Query: 221 IRSMPFEADSSVWETLLSACRIHSN 147 MP + + W ++S H + Sbjct: 380 FERMP-KKNVVAWNAIISGYSQHGH 403 >ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor] gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor] Length = 862 Score = 175 bits (444), Expect = 6e-42 Identities = 73/153 (47%), Positives = 113/153 (73%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG+++ A RVF+ MPDK+ VSWN++I AYG HGL+ ++S +MQ G+KPDH+TFL+ Sbjct: 593 CGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLAL 652 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 + +C+H+GL +EG Q+F+ M EY + P+MEH+AC+VDL R G+L++A I MPF+ Sbjct: 653 ISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKP 712 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 D+ +W LL ACR+H N+ +A++A+ ++ K +P Sbjct: 713 DAGIWGALLHACRVHRNVELADIASQELFKLDP 745 Score = 57.8 bits (138), Expect = 2e-06 Identities = 37/139 (26%), Positives = 72/139 (51%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG +D ++ +F M K V+WN+MI ++ ++G AL LF +M G K +++T SA Sbjct: 492 CGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSA 551 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 L +C+ G +I + + + + + ++D+ + G +E A + MP + Sbjct: 552 LSACASLPAIYYGKEI-HGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKN 610 Query: 197 DSSVWETLLSACRIHSNIR 141 + S W +++SA H ++ Sbjct: 611 EVS-WNSIISAYGAHGLVK 628 >gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays] Length = 853 Score = 175 bits (443), Expect = 8e-42 Identities = 74/153 (48%), Positives = 113/153 (73%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG+++ A RVF+ MPDK+ VSWN++I AYG HGL+ ++SL MQ G+KPDH+TFL+ Sbjct: 593 CGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLAL 652 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 + +C+H+GL +EG Q+F+ M +Y + P+MEH+AC+VDL R GKL++A I MPF+ Sbjct: 653 ISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKP 712 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 D+ +W LL ACR+H N+ +A++A+ ++ K +P Sbjct: 713 DAGIWGALLHACRVHRNVELADIASQELFKLDP 745 Score = 59.3 bits (142), Expect = 6e-07 Identities = 37/139 (26%), Positives = 72/139 (51%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG +D ++ +F M K V+WN+MI ++ ++G AL LF +M G K +++T +A Sbjct: 492 CGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAA 551 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 L +C+ G +I + + + + + ++D+ + G LE A + MP + Sbjct: 552 LSACASLPAIYYGKEI-HGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKN 610 Query: 197 DSSVWETLLSACRIHSNIR 141 + S W +++SA H ++ Sbjct: 611 EVS-WNSIISAYGAHGLVK 628 >emb|CBI31086.3| unnamed protein product [Vitis vinifera] Length = 766 Score = 175 bits (443), Expect = 8e-42 Identities = 77/153 (50%), Positives = 108/153 (70%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG++D A RVF TM +K+ VSWN++I AYG HG + +L+LF M G G +PDH+TFL+ Sbjct: 500 CGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAI 559 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 + +C H+G DEG F M +E ++ +MEHYAC+VDL GR G+L EA+G+I SMPF Sbjct: 560 ISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSP 619 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 D+ VW TLL ACR+H N+ +AE+A+ + +P Sbjct: 620 DAGVWGTLLGACRLHGNVELAEVASRNLFDLDP 652 >ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like [Vitis vinifera] Length = 853 Score = 175 bits (443), Expect = 8e-42 Identities = 77/153 (50%), Positives = 108/153 (70%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG++D A RVF TM +K+ VSWN++I AYG HG + +L+LF M G G +PDH+TFL+ Sbjct: 599 CGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAI 658 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 + +C H+G DEG F M +E ++ +MEHYAC+VDL GR G+L EA+G+I SMPF Sbjct: 659 ISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSP 718 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 D+ VW TLL ACR+H N+ +AE+A+ + +P Sbjct: 719 DAGVWGTLLGACRLHGNVELAEVASRNLFDLDP 751 >ref|XP_006353048.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like [Solanum tuberosum] Length = 852 Score = 171 bits (434), Expect = 8e-41 Identities = 77/162 (47%), Positives = 111/162 (68%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG+++ A+RVF M K+ VSWN++I AYG H + L+LF M+ GF+PDH+TFL+ Sbjct: 603 CGNLEVAWRVFDLMAHKNEVSWNSIIAAYGNHCRLKDCLNLFHGMRKDGFQPDHVTFLAI 662 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 + +C HSG +EG F M EY + P+ EHYAC+VDL GR G +EEA+G+I+SMPF Sbjct: 663 ISACGHSGGVEEGKHYFNCMTKEYGITPRTEHYACMVDLFGRAGLVEEAFGVIKSMPFAP 722 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP*PFMGFYQI 72 D+ +W TLL ACR+H N +AE+A++ +L +P G+Y + Sbjct: 723 DAGIWGTLLGACRLHGNTELAEMASEHLLSLDP-QNSGYYML 763 Score = 57.8 bits (138), Expect = 2e-06 Identities = 35/144 (24%), Positives = 74/144 (51%), Gaps = 5/144 (3%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG +D A +VF+ M ++ +V WN+MI + ++ ++A+ F +M G K D ++ SA Sbjct: 502 CGRLDLAQQVFRRMSERDVVCWNSMITSCCQNAEPELAIDFFQQMGAIGAKYDCVSISSA 561 Query: 377 LYSCS-----HSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRS 213 L +C+ H G G+ + ++ + + + ++D+ + G LE A+ + Sbjct: 562 LSACANLPALHYGKEIHGFIMKSALSSDVFV------ESALIDMYAKCGNLEVAWRVFDL 615 Query: 212 MPFEADSSVWETLLSACRIHSNIR 141 M + + S W ++++A H ++ Sbjct: 616 MAHKNEVS-WNSIIAAYGNHCRLK 638 >ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like [Cucumis sativus] Length = 849 Score = 171 bits (434), Expect = 8e-41 Identities = 73/153 (47%), Positives = 109/153 (71%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG+I+ A++VF+ M D++++SW ++I + KHG AL LF KM G +P+ +T+++ Sbjct: 525 CGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAV 584 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 L +CSH GL +EGW+ F+SM E+ ++P+MEHYACIVD+LGR G L EA I SMP++A Sbjct: 585 LSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKA 644 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 D+ VW T L ACR+H N+ + + AA I++ EP Sbjct: 645 DALVWRTFLGACRVHGNLELGKHAAKMIIEQEP 677 >gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group] Length = 852 Score = 171 bits (433), Expect = 1e-40 Identities = 71/153 (46%), Positives = 114/153 (74%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG++++A+RVF++MP+K+ VSWN++I +YG +GL+ ++SL MQ GFK DH+TFL+ Sbjct: 598 CGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLAL 657 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 + +C+H+G EG ++F M +EY + P+MEH+AC+VDL R GKL++A +I MPF+ Sbjct: 658 VSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKP 717 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 D+ +W LL ACR+H N+ +AE+A+ ++ K +P Sbjct: 718 DAGIWGALLHACRVHRNVELAEIASQELFKLDP 750 Score = 58.9 bits (141), Expect = 8e-07 Identities = 35/131 (26%), Positives = 71/131 (54%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG +D ++ +F + K V+WN+MI ++ ++G + AL+LF +M G K ++T S Sbjct: 497 CGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSV 556 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 L +C+ G +I + + + + + ++D+ G+ G LE A+ + SMP E Sbjct: 557 LSACASLPAIYYGKEI-HGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMP-EK 614 Query: 197 DSSVWETLLSA 165 + W +++++ Sbjct: 615 NEVSWNSIIAS 625 >gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group] gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group] Length = 843 Score = 171 bits (433), Expect = 1e-40 Identities = 71/153 (46%), Positives = 114/153 (74%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG++++A+RVF++MP+K+ VSWN++I +YG +GL+ ++SL MQ GFK DH+TFL+ Sbjct: 598 CGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLAL 657 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 + +C+H+G EG ++F M +EY + P+MEH+AC+VDL R GKL++A +I MPF+ Sbjct: 658 VSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKP 717 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 D+ +W LL ACR+H N+ +AE+A+ ++ K +P Sbjct: 718 DAGIWGALLHACRVHRNVELAEIASQELFKLDP 750 Score = 58.9 bits (141), Expect = 8e-07 Identities = 35/131 (26%), Positives = 71/131 (54%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG +D ++ +F + K V+WN+MI ++ ++G + AL+LF +M G K ++T S Sbjct: 497 CGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSV 556 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 L +C+ G +I + + + + + ++D+ G+ G LE A+ + SMP E Sbjct: 557 LSACASLPAIYYGKEI-HGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMP-EK 614 Query: 197 DSSVWETLLSA 165 + W +++++ Sbjct: 615 NEVSWNSIIAS 625 >ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720 [Vitis vinifera] Length = 836 Score = 171 bits (432), Expect = 1e-40 Identities = 77/153 (50%), Positives = 108/153 (70%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG + +A +F+ MP +++V+WN+MI YG HG + A+ LF +M+ S PD +TFL+ Sbjct: 595 CGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLAL 654 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 + SCSHSG+ +EG +F+ M+ EY + P+MEHYA +VDLLGR G+L++AY IR MP +A Sbjct: 655 ITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDA 714 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 D SVW LL ACR H N+ + EL AD +LK EP Sbjct: 715 DRSVWLCLLFACRAHRNMELGELVADNLLKMEP 747 >emb|CBI25349.3| unnamed protein product [Vitis vinifera] Length = 1241 Score = 171 bits (432), Expect = 1e-40 Identities = 77/153 (50%), Positives = 108/153 (70%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG + +A +F+ MP +++V+WN+MI YG HG + A+ LF +M+ S PD +TFL+ Sbjct: 1000 CGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLAL 1059 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 + SCSHSG+ +EG +F+ M+ EY + P+MEHYA +VDLLGR G+L++AY IR MP +A Sbjct: 1060 ITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDA 1119 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 D SVW LL ACR H N+ + EL AD +LK EP Sbjct: 1120 DRSVWLCLLFACRAHRNMELGELVADNLLKMEP 1152 >ref|XP_006422178.1| hypothetical protein CICLE_v10006927mg [Citrus clementina] gi|568874825|ref|XP_006490514.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like [Citrus sinensis] gi|557524051|gb|ESR35418.1| hypothetical protein CICLE_v10006927mg [Citrus clementina] Length = 861 Score = 170 bits (431), Expect = 2e-40 Identities = 74/153 (48%), Positives = 106/153 (69%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 C +++ A++VFK M D++++SW +MI + KHG AL +F+KM G KP+ +T+++ Sbjct: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 L +CSH+GL EGW+ F SM DE+ +V +MEHYAC+VDLLGR G L EA IRSMP A Sbjct: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 D VW T L ACR+H + + + AA+ IL+ +P Sbjct: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDP 689 >ref|XP_004231209.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like [Solanum lycopersicum] Length = 929 Score = 170 bits (431), Expect = 2e-40 Identities = 74/153 (48%), Positives = 114/153 (74%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG+++ A +VF+ + DK++ SWN+MI + +GL A+SLF KM+ + +PD +TF++ Sbjct: 605 CGNLENAQKVFQNLEDKTLASWNSMITGFAIYGLGTEAISLFDKMREAKIQPDAITFIAL 664 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 L SC HSGL D+GW+ F+ MK ++ ++P +EHY+C+VDLLGRVG L+EA I+SMP E Sbjct: 665 LSSCKHSGLLDKGWKYFDHMKTDFGVIPTIEHYSCMVDLLGRVGYLDEASDFIQSMPMEP 724 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 +++VW LL++CRIH N+ +AE+AA+ + K EP Sbjct: 725 NAAVWGALLTSCRIHGNVELAEIAAEHLFKLEP 757 >ref|XP_006651878.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like [Oryza brachyantha] Length = 804 Score = 170 bits (430), Expect = 2e-40 Identities = 72/153 (47%), Positives = 112/153 (73%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG+++ A+RVF++MP+K+ VSWN++I +YG +GL+ ++SL MQ GFK DH+TFLS Sbjct: 561 CGNLELAHRVFESMPEKNEVSWNSIISSYGAYGLVKESVSLLRHMQEEGFKADHVTFLSL 620 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 + +C+H+G EG ++F M EY + P+MEH+AC+VDL R G L++A +I MPF+A Sbjct: 621 ISACAHAGQVQEGLRLFRCMTQEYQIAPRMEHFACMVDLYSRAGMLDKAMQLIVEMPFKA 680 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 D+ +W LL ACR+H N+ +AE+A+ ++ K +P Sbjct: 681 DAGIWGALLHACRMHRNVELAEIASQELFKLDP 713 Score = 60.1 bits (144), Expect = 4e-07 Identities = 37/131 (28%), Positives = 70/131 (53%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG +D ++ +F + K V+WN+MI ++ ++G + ALSLF +M G K +T S Sbjct: 460 CGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALSLFREMCMKGVKYSSVTISSV 519 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 L +C+ G +I + + + + + ++D+ G+ G LE A+ + SMP E Sbjct: 520 LSACASLPAIYYGKEI-HGVIIKGPIRADLFAESALIDMYGKCGNLELAHRVFESMP-EK 577 Query: 197 DSSVWETLLSA 165 + W +++S+ Sbjct: 578 NEVSWNSIISS 588 Score = 57.8 bits (138), Expect = 2e-06 Identities = 28/61 (45%), Positives = 39/61 (63%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 C +D A+++F MP +V+WN MI ++GLID AL LF MQ SG +PD +T +S Sbjct: 258 CKCLDDAWKLFAVMPQDDLVTWNGMISGCVQNGLIDEALLLFRNMQKSGIRPDPVTLVSL 317 Query: 377 L 375 L Sbjct: 318 L 318 >gb|EOY20071.1| Pentatricopeptide repeat-containing protein, putative [Theobroma cacao] Length = 849 Score = 170 bits (430), Expect = 2e-40 Identities = 80/153 (52%), Positives = 106/153 (69%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG + +A +F+ M K +VSWN M+ YG HG ALSLF +M+ G PD +TFLS Sbjct: 608 CGFLKYAEYIFQNMSQKDVVSWNCMLAGYGSHGDCLRALSLFDEMKNCGITPDDVTFLSL 667 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 + SC+H+GL DEG IF+SM E+ + PKMEHY IVDLLGR G+LE+AY +++MP E Sbjct: 668 ISSCNHAGLVDEGQYIFQSMTVEHGIEPKMEHYVNIVDLLGRAGRLEDAYNFVKTMPMEP 727 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 + SVW +LL ACR +SN+ + ELAA +LK EP Sbjct: 728 NRSVWLSLLCACRAYSNVELGELAAHNLLKVEP 760 >ref|XP_006490200.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Citrus sinensis] Length = 762 Score = 169 bits (428), Expect = 4e-40 Identities = 77/155 (49%), Positives = 105/155 (67%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG+I A +FK + + VSW A+I Y +HGL + AL LF +M+ G KP+ +TFL Sbjct: 522 CGNISEAAMIFKRISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCV 581 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 L++CSH GL +EG F+ MK+++ LVP+MEHYACIVDL GRVG+L++A IR MP E Sbjct: 582 LFACSHGGLVEEGLHYFQQMKEKFGLVPEMEHYACIVDLFGRVGRLDDAMEFIRQMPIEP 641 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP*P 93 VW+TLL ACR+H N + E+AA ++L P P Sbjct: 642 SEMVWQTLLGACRVHGNAELGEIAAQKVLSVRPDP 676 Score = 59.3 bits (142), Expect = 6e-07 Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 1/130 (0%) Frame = -3 Query: 554 GDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSAL 375 G ++ +Y++F TM + + VSWNAMI + +GL A F M+ G P+ +T + Sbjct: 217 GRVEDSYKMFNTMTEHNEVSWNAMISGFTSNGLHSEAFDHFLLMKSEGVTPNMLTIIGVS 276 Query: 374 YSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEAD 195 + D G ++ +S E L ++ ++D+ + G L +A + S+ + Sbjct: 277 KAVGQLHDVDRGKEV-QSFASELGLESNVQVGTALIDMYSKCGSLNDARAVFDSILINSG 335 Query: 194 SSV-WETLLS 168 ++V W ++S Sbjct: 336 ANVLWNAIIS 345 Score = 58.5 bits (140), Expect = 1e-06 Identities = 36/135 (26%), Positives = 67/135 (49%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG ++ +VF M ++ +VSW ++ A+ + + AL++F +M+ GF P+ TF S Sbjct: 421 CGALEDVRKVFDWMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEGFSPNQFTFSSV 480 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 L SC+ D G Q+ S+ + L + ++D+ + G + EA I + + Sbjct: 481 LVSCAGLCFLDLGRQV-HSLCCKTGLDTDKCIESALLDMYAKCGNISEAAMIFKRIS-NP 538 Query: 197 DSSVWETLLSACRIH 153 D+ W ++S H Sbjct: 539 DTVSWTAIISGYAQH 553 >ref|XP_006479094.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like isoform X1 [Citrus sinensis] gi|568850820|ref|XP_006479095.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like isoform X2 [Citrus sinensis] gi|568850822|ref|XP_006479096.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like isoform X3 [Citrus sinensis] Length = 1077 Score = 169 bits (428), Expect = 4e-40 Identities = 82/153 (53%), Positives = 102/153 (66%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG ID A R F MP+K+ VSWNAMI + +HG A++LF KM+ P+H+TF+ Sbjct: 753 CGSIDDAKRGFLEMPEKNEVSWNAMITGFSQHGYALEAINLFEKMKKHDVMPNHVTFVGV 812 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 L +CSH GL +EG + FESM EY LVPK EHYAC+VDLLGR G L A MP E Sbjct: 813 LSACSHVGLVNEGLRYFESMSTEYGLVPKPEHYACVVDLLGRAGSLSRAREFTEQMPIEP 872 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 D+ VW TLLSACR+H N+ I E AA+ +L+ EP Sbjct: 873 DAMVWRTLLSACRVHKNMEIGEYAANHLLELEP 905 Score = 66.6 bits (161), Expect = 4e-09 Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 3/132 (2%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 C D++ AY+ F T +++V WN M++AYG+ + + +F +MQ G P+ T+ + Sbjct: 450 CSDVETAYKFFLTTETENVVLWNVMLVAYGQLNDLSESFQIFKQMQTEGLTPNQYTYPTI 509 Query: 377 LYSCSHSGLSDEGWQIF-ESMKDEYNLVPKMEHYAC--IVDLLGRVGKLEEAYGIIRSMP 207 L +C+ G G QI + +K + + Y C ++D+ ++G L A I+R +P Sbjct: 510 LRTCTSLGALSLGEQIHTQVIKTGF----QFNVYVCSVLIDMYAKLGNLNTAQEILRRLP 565 Query: 206 FEADSSVWETLL 171 E D W ++ Sbjct: 566 -EDDVVSWTAMI 576 Score = 65.9 bits (159), Expect = 6e-09 Identities = 36/134 (26%), Positives = 71/134 (52%), Gaps = 5/134 (3%) Frame = -3 Query: 554 GDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSAL 375 G+++ A + + +P+ +VSW AMI+ + +HG+ AL LF +M+ G + D++ F SA+ Sbjct: 552 GNLNTAQEILRRLPEDDVVSWTAMIVGFVQHGMFGEALELFEEMENQGIQSDNIGFSSAI 611 Query: 374 YSCSHSGLSDEGWQI-----FESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSM 210 +C+ ++G QI D+ ++ ++ L R G+++EAY + + Sbjct: 612 SACAGIQALNQGRQIHAQSYISGFSDDLSI------GNALISLYARCGRIQEAYLVFNKI 665 Query: 209 PFEADSSVWETLLS 168 + D+ W L+S Sbjct: 666 DAK-DNISWNGLIS 678 >ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like [Cucumis sativus] Length = 849 Score = 169 bits (428), Expect = 4e-40 Identities = 72/153 (47%), Positives = 109/153 (71%) Frame = -3 Query: 557 CGDIDFAYRVFKTMPDKSIVSWNAMILAYGKHGLIDMALSLFFKMQGSGFKPDHMTFLSA 378 CG+I+ A++VF+ M D++++SW ++I + KHG AL LF KM G +P+ +T+++ Sbjct: 525 CGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAV 584 Query: 377 LYSCSHSGLSDEGWQIFESMKDEYNLVPKMEHYACIVDLLGRVGKLEEAYGIIRSMPFEA 198 L +CSH GL +EGW+ F+SM E+ ++P+MEHYAC+VD+LGR G L EA I SMP++A Sbjct: 585 LSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKA 644 Query: 197 DSSVWETLLSACRIHSNIRIAELAADQILKSEP 99 D+ VW T L ACR+H N+ + + AA I++ EP Sbjct: 645 DALVWRTFLGACRVHGNLELGKHAAKMIIEQEP 677