BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00028531
         (458 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004308608.1| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12
ref|XP_006651327.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
gb|EMJ15377.1| hypothetical protein PRUPE_ppa019185mg [Prunus pe...    74   2e-11
gb|EXB95839.1| hypothetical protein L484_010038 [Morus notabilis]      74   3e-11
gb|EOY28177.1| Tetratricopeptide repeat-like superfamily protein...    74   3e-11
gb|EMT27537.1| Pentatricopeptide repeat-containing protein [Aegi...    73   3e-11
gb|EMS46161.1| hypothetical protein TRIUR3_10442 [Triticum urartu]     73   3e-11
ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat...    73   3e-11
gb|EXB70668.1| hypothetical protein L484_023854 [Morus notabilis]      73   5e-11
ref|XP_004972232.1| PREDICTED: putative pentatricopeptide repeat...    73   5e-11
ref|XP_004229452.1| PREDICTED: pentatricopeptide repeat-containi...    73   5e-11
ref|XP_006658876.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
ref|XP_004952954.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
ref|XP_006602194.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
ref|XP_002516788.1| pentatricopeptide repeat-containing protein,...    72   6e-11
gb|EPS69104.1| hypothetical protein M569_05662, partial [Genlise...    72   8e-11
emb|CAJ32535.1| pentatricopeptide repeat-containing protein [Hor...    72   8e-11
ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group] g...    72   8e-11
gb|AFW62799.1| putative pentatricopeptide repeat family protein ...    72   8e-11
dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]     72   8e-11

>ref|XP_004308608.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Fragaria vesca subsp. vesca]
          Length = 861

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 32/50 (64%), Positives = 42/50 (84%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           Y CM+D+L RAGKI+EA E++NTMPF+A+A  WGSLLGA R H+N E+G+
Sbjct: 629 YACMIDILGRAGKIQEAMELVNTMPFQANASVWGSLLGAARIHKNVELGE 678


>ref|XP_006651327.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Oryza brachyantha]
          Length = 733

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 32/56 (57%), Positives = 42/56 (75%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGKC*RNQM 289
           Y CMVDLL RAG +EEA ++IN MP E DA+ WG+L+GACR HRN E+ +   N++
Sbjct: 500 YSCMVDLLGRAGLVEEALDLINNMPVEPDAVIWGALMGACRMHRNAEIAELAANKL 555


>gb|EMJ15377.1| hypothetical protein PRUPE_ppa019185mg [Prunus persica]
          Length = 858

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 32/50 (64%), Positives = 41/50 (82%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           Y CM+DLL RAGKI EA E++NTMPF+A+A  WG+LLGA R H+N E+G+
Sbjct: 626 YACMIDLLGRAGKINEAMELVNTMPFQANASVWGALLGAARIHKNVELGQ 675


>gb|EXB95839.1| hypothetical protein L484_010038 [Morus notabilis]
          Length = 709

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 31/50 (62%), Positives = 40/50 (80%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           YGCMVDLL RAG++EEA E+I +MP +AD + WG+LL ACR H N E+G+
Sbjct: 605 YGCMVDLLGRAGRLEEAEELIKSMPMKADIVIWGTLLAACRTHGNVEVGE 654


>gb|EOY28177.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 946

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 31/50 (62%), Positives = 41/50 (82%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           Y CM+DLL RAG+++EA E+ NTMPF+ADA  WG+LLGA R H+N E+G+
Sbjct: 714 YACMIDLLGRAGRLDEAMELANTMPFQADASVWGALLGAARIHKNVELGQ 763


>gb|EMT27537.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
          Length = 444

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 32/50 (64%), Positives = 40/50 (80%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           YGCMVDLL RAG +EEA ++I +MPFE DAI W +LLGACR H+N E+ +
Sbjct: 212 YGCMVDLLGRAGHVEEAMQLIRSMPFEPDAIIWRTLLGACRIHKNVEIAE 261


>gb|EMS46161.1| hypothetical protein TRIUR3_10442 [Triticum urartu]
          Length = 492

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 32/50 (64%), Positives = 40/50 (80%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           YGCMVDLL RAG +EEA ++I +MPFE DAI W +LLGACR H+N E+ +
Sbjct: 260 YGCMVDLLGRAGHVEEAMQLIRSMPFEPDAIIWRTLLGACRIHKNVEIAE 309


>ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like isoform X1 [Glycine max]
           gi|571497773|ref|XP_006594017.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g68930-like isoform X2 [Glycine max]
          Length = 747

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 32/50 (64%), Positives = 39/50 (78%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           Y CM+DL +RAG++EEAR+ IN MPF  DAI W SLL +CR HRN E+GK
Sbjct: 515 YTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGK 564


>gb|EXB70668.1| hypothetical protein L484_023854 [Morus notabilis]
          Length = 628

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 33/50 (66%), Positives = 39/50 (78%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           YGCMVDLL RAG IEEA E+I++MP E DA  WG+LLGACR H   E+G+
Sbjct: 481 YGCMVDLLGRAGLIEEAEELISSMPMEPDAYIWGALLGACRIHGEVELGE 530


>ref|XP_004972232.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Setaria italica]
          Length = 640

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 31/50 (62%), Positives = 41/50 (82%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           Y CMVDLL RAG++EEARE+I++MP  AD   WG+LLGAC+ H+N E+G+
Sbjct: 408 YTCMVDLLGRAGRLEEARELISSMPMPADGAVWGALLGACKIHKNAEVGE 457


>ref|XP_004229452.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like [Solanum lycopersicum]
          Length = 700

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 31/50 (62%), Positives = 39/50 (78%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           YGCMVDL  RAG+++EA E+I +MP EAD I WG+LL ACR H N E+G+
Sbjct: 596 YGCMVDLFGRAGRLKEAEELIRSMPMEADIIIWGTLLAACRTHGNTEIGE 645


>ref|XP_006658876.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Oryza brachyantha]
          Length = 509

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 31/50 (62%), Positives = 40/50 (80%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           YGCMVDLL R+G +EEAR +I +MPFE DAI W +LLGACR H+N ++ +
Sbjct: 277 YGCMVDLLGRSGHVEEARHLIRSMPFEPDAIIWRALLGACRIHKNVDIAE 326


>ref|XP_004952954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Setaria italica]
          Length = 883

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 30/50 (60%), Positives = 41/50 (82%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           Y CM+DLL RAGK+E+A E++N MPFEA+A  WG+LLGA R H++ E+G+
Sbjct: 651 YSCMIDLLGRAGKLEDAMELVNNMPFEANAAVWGALLGASRVHQDPELGR 700


>ref|XP_006602194.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like isoform X1 [Glycine max]
          Length = 775

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 31/50 (62%), Positives = 40/50 (80%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           YGCMVDLL RAG ++EA E+I++MP   D   WG+LLGACR HR++EMG+
Sbjct: 543 YGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGE 592


>ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543876|gb|EEF45402.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 710

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 30/50 (60%), Positives = 40/50 (80%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           YGCMVDLL RAG++EEA E+I +MP +AD + WG+LL ACR H N ++G+
Sbjct: 604 YGCMVDLLGRAGRLEEAEEMIRSMPMKADVVIWGTLLAACRTHGNVDVGE 653


>gb|EPS69104.1| hypothetical protein M569_05662, partial [Genlisea aurea]
          Length = 775

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           Y C+VDLL RAG + EA + IN MP EADAI WGSL+GACR H N +MG+
Sbjct: 470 YACLVDLLGRAGLLNEALQTINGMPVEADAIVWGSLMGACRSHVNSDMGE 519


>emb|CAJ32535.1| pentatricopeptide repeat-containing protein [Hordeum vulgare subsp.
           vulgare]
          Length = 652

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 31/50 (62%), Positives = 40/50 (80%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           Y CMVDLL RAG++EEARE+I++MP  AD   WG+LLGAC+ H+N E G+
Sbjct: 416 YACMVDLLGRAGRLEEARELISSMPMPADGSVWGALLGACKIHKNVEAGE 465


>ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
           gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|215768699|dbj|BAH00928.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa
           Japonica Group]
          Length = 877

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 29/50 (58%), Positives = 42/50 (84%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           Y CM+DLL RAGK+++A E++N+MPF+A+A  WG+LLGA R H++ E+GK
Sbjct: 645 YSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGK 694


>gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 29/50 (58%), Positives = 41/50 (82%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           Y CM+D+L RAGK+E+A E++N MPF+A+A  WG+LLGA R HR+ E+G+
Sbjct: 650 YACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGR 699


>dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 30/50 (60%), Positives = 41/50 (82%)
 Frame = -3

Query: 456 YGCMVDLLARAGKIEEAREIINTMPFEADAIFWGSLLGACRGHRNHEMGK 307
           Y CM+DLL RAGK+++A E++N+MPFEA+A  WG+LL A R HR+ E+GK
Sbjct: 647 YSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGK 696