BLASTX nr result
ID: Ephedra25_contig00028164
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00028164
(494 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006857929.1| hypothetical protein AMTR_s00069p00150990 [A... 167 1e-39
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me... 152 6e-35
ref|XP_006661522.1| PREDICTED: DNA-directed RNA polymerase IV su... 151 7e-35
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub... 151 7e-35
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub... 151 7e-35
gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, pu... 150 1e-34
gb|ACL30982.1| mutant DNA dependent RNA polymerase D largest sub... 149 4e-34
gb|ACL30980.1| mutant DNA dependent RNA polymerase D largest sub... 149 4e-34
ref|NP_001182824.1| DNA dependent RNA polymerase D largest subun... 149 4e-34
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no... 148 6e-34
ref|XP_006653694.1| PREDICTED: DNA-directed RNA polymerase IV su... 148 6e-34
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 147 1e-33
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera] 147 1e-33
gb|EEE70198.1| hypothetical protein OsJ_30285 [Oryza sativa Japo... 145 4e-33
gb|EEC85033.1| hypothetical protein OsI_32338 [Oryza sativa Indi... 145 4e-33
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 145 7e-33
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 145 7e-33
ref|XP_004970758.1| PREDICTED: DNA-directed RNA polymerase D sub... 145 7e-33
ref|XP_004970756.1| PREDICTED: DNA-directed RNA polymerase D sub... 145 7e-33
ref|XP_004970755.1| PREDICTED: DNA-directed RNA polymerase D sub... 145 7e-33
>ref|XP_006857929.1| hypothetical protein AMTR_s00069p00150990 [Amborella trichopoda]
gi|548862031|gb|ERN19396.1| hypothetical protein
AMTR_s00069p00150990 [Amborella trichopoda]
Length = 966
Score = 167 bits (423), Expect = 1e-39
Identities = 81/165 (49%), Positives = 110/165 (66%), Gaps = 2/165 (1%)
Frame = -3
Query: 489 ISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXXX 310
ISINP+ C+PF DFDGDCLHGF+PQS+ ++ E +M+L QLLN Q G
Sbjct: 521 ISINPLCCSPFFGDFDGDCLHGFVPQSIDNRVELQELMTLHHQLLNGQDGLPLVSLSHDS 580
Query: 309 XVAAFLLTSSHIFLEAYQMQQLHLFCSSEIPMPAILKAPKLQGPLWTGKQLFQMTLPSNL 130
AA+L+T + FL+ +QMQQL +FC SE+P+PAI K+P +GPLWTG Q F M LP +L
Sbjct: 581 LTAAYLVTRNDEFLDQFQMQQLQMFCPSELPIPAICKSPLSRGPLWTGHQFFSMFLPKSL 640
Query: 129 NYK--SSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDFPSSA 1
+Y+ S+ V ISEGE+L+ SG S+WL S+ + I++ P A
Sbjct: 641 DYQYVSNGVLISEGELLTTSGESRWLQNSNEGIFFAIVKHVPLKA 685
>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
subunit beta [Medicago truncatula]
Length = 1687
Score = 152 bits (383), Expect = 6e-35
Identities = 70/161 (43%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
Frame = -3
Query: 489 ISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXXX 310
+SINPI C+P DFDGDCLHG+IPQS+ ++ E +++L +QL+N Q G
Sbjct: 600 VSINPICCSPLRGDFDGDCLHGYIPQSVGARVELNELVALDRQLINGQSGGNLLSLSQDS 659
Query: 309 XVAAFLLTSSHIFLEAYQMQQLHLFCSSEIPMPAILKAPKLQGPLWTGKQLFQMTLPSNL 130
AA LL + YQ+QQL + C+ E+ PAI KAP P W+GKQLF M LPS
Sbjct: 660 LTAAHLLLEDGVGFNIYQVQQLEMLCNKELTSPAIFKAPSSNTPFWSGKQLFSMLLPSKF 719
Query: 129 NY--KSSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDF 13
+Y S++VF+ +GE++SCS +S WL S++++ Q ++ F
Sbjct: 720 DYAFPSNDVFVKDGELISCSESSGWLRDSENNVFQSLVEHF 760
>ref|XP_006661522.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Oryza
brachyantha]
Length = 1492
Score = 151 bits (382), Expect = 7e-35
Identities = 79/167 (47%), Positives = 103/167 (61%), Gaps = 3/167 (1%)
Frame = -3
Query: 492 AISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXX 313
A+SINP+ C PF DFDGDCLHG++PQSL S+ E ++ LS QLLN+Q G
Sbjct: 483 AVSINPLCCGPFQGDFDGDCLHGYVPQSLQSRVELDELVGLSGQLLNAQDGRSLVSLTHD 542
Query: 312 XXVAAFLLTSSHIFLEAYQMQQLHLFCS--SEIPMPAILKAPKLQGPLWTGKQLFQMTLP 139
AA LTSS +FL+ + QQL + CS S PMP+ILK+ K QGPLWTGKQLF M +P
Sbjct: 543 SLTAAHQLTSSDVFLQKAEFQQLQMLCSSVSSTPMPSILKSSKSQGPLWTGKQLFGMLIP 602
Query: 138 SNLNYKSSE-VFISEGEILSCSGTSKWLSQSDSSLMQKIIRDFPSSA 1
S +N E + I + E+L+ S S WL + SSL + ++ A
Sbjct: 603 SGMNINFDEKLHIKDSEVLAFSSGSFWLQNNTSSLFSVMFEEYGCKA 649
>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
[Cicer arietinum]
Length = 1474
Score = 151 bits (382), Expect = 7e-35
Identities = 71/161 (44%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
Frame = -3
Query: 489 ISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXXX 310
+SINP+ C+P DFDGDCLHG+IPQS+ ++ E +++L KQL+N Q G
Sbjct: 443 VSINPLCCSPLRGDFDGDCLHGYIPQSVGARVELNELVALDKQLINGQSGRNLLSLSQDS 502
Query: 309 XVAAFLLTSSHIFLEAYQMQQLHLFCSSEIPMPAILKAPKLQGPLWTGKQLFQMTLPSNL 130
AA+LL + L YQMQQL + CS ++ PAI+KAP W+GKQLF M +PS+
Sbjct: 503 LTAAYLLLEDGVLLNVYQMQQLQMHCSRKLIPPAIVKAPSSNTSCWSGKQLFSMLMPSSF 562
Query: 129 NY--KSSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDF 13
+Y S VF+ +GE++SCS S WL SD+++ Q ++ F
Sbjct: 563 DYAFPSDGVFVCDGELISCSEASGWLRDSDNNVFQSLVEHF 603
>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
[Cicer arietinum] gi|502160026|ref|XP_004511608.1|
PREDICTED: DNA-directed RNA polymerase D subunit 1-like
isoform X2 [Cicer arietinum]
gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
RNA polymerase D subunit 1-like isoform X3 [Cicer
arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
DNA-directed RNA polymerase D subunit 1-like isoform X4
[Cicer arietinum]
Length = 1475
Score = 151 bits (382), Expect = 7e-35
Identities = 71/161 (44%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
Frame = -3
Query: 489 ISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXXX 310
+SINP+ C+P DFDGDCLHG+IPQS+ ++ E +++L KQL+N Q G
Sbjct: 443 VSINPLCCSPLRGDFDGDCLHGYIPQSVGARVELNELVALDKQLINGQSGRNLLSLSQDS 502
Query: 309 XVAAFLLTSSHIFLEAYQMQQLHLFCSSEIPMPAILKAPKLQGPLWTGKQLFQMTLPSNL 130
AA+LL + L YQMQQL + CS ++ PAI+KAP W+GKQLF M +PS+
Sbjct: 503 LTAAYLLLEDGVLLNVYQMQQLQMHCSRKLIPPAIVKAPSSNTSCWSGKQLFSMLMPSSF 562
Query: 129 NY--KSSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDF 13
+Y S VF+ +GE++SCS S WL SD+++ Q ++ F
Sbjct: 563 DYAFPSDGVFVCDGELISCSEASGWLRDSDNNVFQSLVEHF 603
>gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao]
Length = 1484
Score = 150 bits (380), Expect = 1e-34
Identities = 68/161 (42%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Frame = -3
Query: 489 ISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXXX 310
+SINP++C+PF DFDGDCLHG++PQS+ ++ E + ++SL++QL+N Q G
Sbjct: 450 VSINPLICSPFRGDFDGDCLHGYVPQSIKARVELIELVSLNRQLINGQSGRNLLSLSHDS 509
Query: 309 XVAAFLLTSSHIFLEAYQMQQLHLFCSSEIPMPAILKAPKLQGPLWTGKQLFQMTLPSNL 130
AA+L+ + L +QMQQL +FC + P PAI+KAP L+ +WTGKQL M P
Sbjct: 510 LTAAYLVKEDGVLLNLFQMQQLEMFCPNHSPFPAIVKAPLLRSSVWTGKQLLSMLFPLEF 569
Query: 129 NY--KSSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDF 13
+Y ++V I GE++S S S WL +D +L Q +I+ +
Sbjct: 570 DYDFTPNDVVIRNGELISSSEGSTWLRDADGNLFQSLIKHY 610
>gb|ACL30982.1| mutant DNA dependent RNA polymerase D largest subunit rpd1-8 [Zea
mays]
Length = 1444
Score = 149 bits (376), Expect = 4e-34
Identities = 74/165 (44%), Positives = 101/165 (61%), Gaps = 2/165 (1%)
Frame = -3
Query: 489 ISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXXX 310
+SINP+ C PF DFDGDCLHG+IPQS+ S+ E ++SL QLLN Q G
Sbjct: 453 VSINPLCCTPFAGDFDGDCLHGYIPQSIRSRVELEELVSLHNQLLNMQDGRNLVSLTHDS 512
Query: 309 XVAAFLLTSSHIFLEAYQMQQLHLFC-SSEIPMPAILKAPKLQGPLWTGKQLFQMTLPSN 133
AA LLTS+ +FL+ ++QQL + C S P PA++K+ QG LWTGKQLF M LPS
Sbjct: 513 LAAAHLLTSTDVFLKKSELQQLQMLCLSVSTPAPAVIKSMNFQGSLWTGKQLFSMLLPSG 572
Query: 132 LNYK-SSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDFPSSA 1
+N+ +E+ I + E+L+CS S WL + S L + + + A
Sbjct: 573 MNFSCDTELHIMDSEVLTCSLGSSWLQNNTSGLFSVMFKQYGCKA 617
>gb|ACL30980.1| mutant DNA dependent RNA polymerase D largest subunit rpd1-1 [Zea
mays]
Length = 871
Score = 149 bits (376), Expect = 4e-34
Identities = 74/165 (44%), Positives = 101/165 (61%), Gaps = 2/165 (1%)
Frame = -3
Query: 489 ISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXXX 310
+SINP+ C PF DFDGDCLHG+IPQS+ S+ E ++SL QLLN Q G
Sbjct: 453 VSINPLCCTPFAGDFDGDCLHGYIPQSIRSRVELEELVSLHNQLLNMQDGRNLVSLTHDS 512
Query: 309 XVAAFLLTSSHIFLEAYQMQQLHLFC-SSEIPMPAILKAPKLQGPLWTGKQLFQMTLPSN 133
AA LLTS+ +FL+ ++QQL + C S P PA++K+ QG LWTGKQLF M LPS
Sbjct: 513 LAAAHLLTSTDVFLKKSELQQLQMLCLSVSTPAPAVIKSMNFQGSLWTGKQLFSMLLPSG 572
Query: 132 LNYK-SSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDFPSSA 1
+N+ +E+ I + E+L+CS S WL + S L + + + A
Sbjct: 573 MNFSCDTELHIMDSEVLTCSLGSSWLQNNTSGLFSVMFKQYGCKA 617
>ref|NP_001182824.1| DNA dependent RNA polymerase D largest subunit [Zea mays]
gi|219662980|gb|ACL30979.1| DNA dependent RNA polymerase
D largest subunit [Zea mays]
gi|414869425|tpg|DAA47982.1| TPA: putative DNA dependent
RNA polymerase D largest subunit family protein [Zea
mays] gi|414869426|tpg|DAA47983.1| TPA: putative DNA
dependent RNA polymerase D largest subunit family
protein [Zea mays]
Length = 1444
Score = 149 bits (376), Expect = 4e-34
Identities = 74/165 (44%), Positives = 101/165 (61%), Gaps = 2/165 (1%)
Frame = -3
Query: 489 ISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXXX 310
+SINP+ C PF DFDGDCLHG+IPQS+ S+ E ++SL QLLN Q G
Sbjct: 453 VSINPLCCTPFAGDFDGDCLHGYIPQSIRSRVELEELVSLHNQLLNMQDGRNLVSLTHDS 512
Query: 309 XVAAFLLTSSHIFLEAYQMQQLHLFC-SSEIPMPAILKAPKLQGPLWTGKQLFQMTLPSN 133
AA LLTS+ +FL+ ++QQL + C S P PA++K+ QG LWTGKQLF M LPS
Sbjct: 513 LAAAHLLTSTDVFLKKSELQQLQMLCLSVSTPAPAVIKSMNFQGSLWTGKQLFSMLLPSG 572
Query: 132 LNYK-SSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDFPSSA 1
+N+ +E+ I + E+L+CS S WL + S L + + + A
Sbjct: 573 MNFSCDTELHIMDSEVLTCSLGSSWLQNNTSGLFSVMFKQYGCKA 617
>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
Length = 1410
Score = 148 bits (374), Expect = 6e-34
Identities = 74/163 (45%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Frame = -3
Query: 492 AISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXX 313
A+S+NP+ C+PF ADFDGDCLHG+IPQS+ S+ E ++SL KQLLN Q G
Sbjct: 395 ALSLNPLCCSPFRADFDGDCLHGYIPQSVASRVELKELVSLDKQLLNGQSGKNLISLSQD 454
Query: 312 XXVAAFLLTSSHIFLEAYQMQQLHLFCSSEIPMPAILKAPKLQGPLWTGKQLFQMTLPSN 133
AA L+ + + +QMQQL +F S PAI+KAP L P+WTGKQ+F M LP
Sbjct: 455 SLTAAHLMLEDSVTINRFQMQQLQMFISHHPLSPAIIKAPSLSTPVWTGKQVFSMLLPEG 514
Query: 132 LNY--KSSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDFP 10
+Y S+ V+I GE++S G+S WL +D ++ Q + ++FP
Sbjct: 515 FDYVFSSANVYIKNGELISAEGSS-WLRDTD-NIFQSLAKNFP 555
>ref|XP_006653694.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Oryza
brachyantha]
Length = 1386
Score = 148 bits (374), Expect = 6e-34
Identities = 73/167 (43%), Positives = 103/167 (61%), Gaps = 3/167 (1%)
Frame = -3
Query: 492 AISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXX 313
A+SINP+ C PF DFDGDCLHG++PQS+ S+ E ++ L++QLLN+Q G
Sbjct: 377 AVSINPLCCDPFKGDFDGDCLHGYVPQSIQSRVELEELVGLNRQLLNAQDGRSLVSLTHD 436
Query: 312 XXVAAFLLTSSHIFLEAYQMQQLHLFCS--SEIPMPAILKAPKLQGPLWTGKQLFQMTLP 139
AA LTS+ I L+ + QQL + CS S PMP+++K+ QGPLWTGKQLF + LP
Sbjct: 437 SLAAAHQLTSADILLQKAEFQQLQMLCSSISSTPMPSVIKSANSQGPLWTGKQLFGLLLP 496
Query: 138 SNLNYK-SSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDFPSSA 1
S +N + I + E+L+CS S WL + SSL + +++ A
Sbjct: 497 SGMNISFDQNLHIKDSEVLTCSSGSLWLQNNTSSLFSVMFKEYGRKA 543
>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
subunit 1-like [Vitis vinifera]
Length = 1560
Score = 147 bits (372), Expect = 1e-33
Identities = 72/165 (43%), Positives = 100/165 (60%), Gaps = 2/165 (1%)
Frame = -3
Query: 489 ISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXXX 310
+SINP+ C+PF DFDGDCLHG+IPQS+ S+ E +++L++QL+N Q G
Sbjct: 469 VSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDS 528
Query: 309 XVAAFLLTSSHIFLEAYQMQQLHLFCSSEIPMPAILKAPKLQGPLWTGKQLFQMTLPSNL 130
AA L+ + L +QMQQL +FC ++ PAI+KAP L +WTGKQLF M LP
Sbjct: 529 LSAAHLVMEDGVLLNLFQMQQLEMFCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGF 588
Query: 129 NY--KSSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDFPSSA 1
NY + V IS+GE++S S S WL D +L +++D A
Sbjct: 589 NYVFPLNGVRISDGELISSSDGSAWLRDIDGNLFSSLVKDCQGKA 633
>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
Length = 1393
Score = 147 bits (372), Expect = 1e-33
Identities = 72/165 (43%), Positives = 100/165 (60%), Gaps = 2/165 (1%)
Frame = -3
Query: 489 ISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXXX 310
+SINP+ C+PF DFDGDCLHG+IPQS+ S+ E +++L++QL+N Q G
Sbjct: 439 VSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLSLSQDS 498
Query: 309 XVAAFLLTSSHIFLEAYQMQQLHLFCSSEIPMPAILKAPKLQGPLWTGKQLFQMTLPSNL 130
AA L+ + L +QMQQL +FC ++ PAI+KAP L +WTGKQLF M LP
Sbjct: 499 LSAAHLVMEDGVLLNLFQMQQLEMFCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGF 558
Query: 129 NY--KSSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDFPSSA 1
NY + V IS+GE++S S S WL D +L +++D A
Sbjct: 559 NYVFPLNGVRISDGELISSSDGSAWLRDIDGNLFSSLVKDCQGKA 603
>gb|EEE70198.1| hypothetical protein OsJ_30285 [Oryza sativa Japonica Group]
Length = 1384
Score = 145 bits (367), Expect = 4e-33
Identities = 73/167 (43%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Frame = -3
Query: 492 AISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXX 313
A++INP+ C PF DFDGDCLHG++PQ+L S+ E ++SLS Q+LN+Q G
Sbjct: 401 AVAINPLCCDPFKGDFDGDCLHGYVPQTLQSRVELDGLVSLSGQMLNAQDGRSLVSLTHD 460
Query: 312 XXVAAFLLTSSHIFLEAYQMQQLHLFCS--SEIPMPAILKAPKLQGPLWTGKQLFQMTLP 139
AA LTS+ +FL+ + QQL L CS S P P+++K+ QG LWTGKQLF M LP
Sbjct: 461 SLAAAHQLTSADVFLQKAEFQQLQLLCSSISPTPEPSVVKSANFQGSLWTGKQLFGMLLP 520
Query: 138 SNLNYK-SSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDFPSSA 1
S +N ++ I + E+L+CS S WL + SS+ + +++ S A
Sbjct: 521 SGMNISFDQKLHIKDSEVLTCSSGSFWLQNNTSSVFSVMFKEYGSKA 567
>gb|EEC85033.1| hypothetical protein OsI_32338 [Oryza sativa Indica Group]
Length = 1384
Score = 145 bits (367), Expect = 4e-33
Identities = 73/167 (43%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
Frame = -3
Query: 492 AISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXX 313
A++INP+ C PF DFDGDCLHG++PQ+L S+ E ++SLS Q+LN+Q G
Sbjct: 401 AVAINPLCCDPFKGDFDGDCLHGYVPQTLQSRVELDGLVSLSGQMLNAQDGRSLVSLTHD 460
Query: 312 XXVAAFLLTSSHIFLEAYQMQQLHLFCS--SEIPMPAILKAPKLQGPLWTGKQLFQMTLP 139
AA LTS+ +FL+ + QQL L CS S P P+++K+ QG LWTGKQLF M LP
Sbjct: 461 SLAAAHQLTSADVFLQKAEFQQLQLLCSSISPTPEPSVVKSANFQGSLWTGKQLFGMLLP 520
Query: 138 SNLNYK-SSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDFPSSA 1
S +N ++ I + E+L+CS S WL + SS+ + +++ S A
Sbjct: 521 SGMNISFDQKLHIKDSEVLTCSSGSFWLQNNTSSVFSVMFKEYGSKA 567
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 145 bits (365), Expect = 7e-33
Identities = 73/159 (45%), Positives = 101/159 (63%), Gaps = 2/159 (1%)
Frame = -3
Query: 489 ISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXXX 310
+SINP+VC+PF DFDGDCLHG+IPQS+ S+ E +++L +QLL+ Q G
Sbjct: 209 LSINPLVCSPFRGDFDGDCLHGYIPQSIDSRIELSELVALKQQLLDGQNGQNLLSLSHDS 268
Query: 309 XVAAFLLTSSHIFLEAYQMQQLHLFCSSEIPMPAILKAPKLQGPLWTGKQLFQMTLPSNL 130
AA L+ +FL+ +QMQQL +FC ++ M AI+KAP WTGKQLF + LPS+L
Sbjct: 269 LTAAHLILEPGVFLDRFQMQQLQMFCPRQLGMTAIVKAPPGNLCYWTGKQLFSLLLPSDL 328
Query: 129 NY--KSSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIR 19
Y S+ V ISEGEI++ SG S WL +L +++
Sbjct: 329 EYVFPSNGVCISEGEIVTSSGGSSWLRDVSDNLFYSLVK 367
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 145 bits (365), Expect = 7e-33
Identities = 73/159 (45%), Positives = 101/159 (63%), Gaps = 2/159 (1%)
Frame = -3
Query: 489 ISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXXX 310
+SINP+VC+PF DFDGDCLHG+IPQS+ S+ E +++L +QLL+ Q G
Sbjct: 422 LSINPLVCSPFRGDFDGDCLHGYIPQSIDSRIELSELVALKQQLLDGQNGQNLLSLSHDS 481
Query: 309 XVAAFLLTSSHIFLEAYQMQQLHLFCSSEIPMPAILKAPKLQGPLWTGKQLFQMTLPSNL 130
AA L+ +FL+ +QMQQL +FC ++ M AI+KAP WTGKQLF + LPS+L
Sbjct: 482 LTAAHLILEPGVFLDRFQMQQLQMFCPRQLGMTAIVKAPPGNLCYWTGKQLFSLLLPSDL 541
Query: 129 NY--KSSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIR 19
Y S+ V ISEGEI++ SG S WL +L +++
Sbjct: 542 EYVFPSNGVCISEGEIVTSSGGSSWLRDVSDNLFYSLVK 580
>ref|XP_004970758.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
[Setaria italica]
Length = 1181
Score = 145 bits (365), Expect = 7e-33
Identities = 73/166 (43%), Positives = 102/166 (61%), Gaps = 3/166 (1%)
Frame = -3
Query: 489 ISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXXX 310
+SINP+ C PF DFDGDCLHG+IPQS+ S+ E ++SL +QLLN Q G
Sbjct: 183 VSINPLCCMPFLGDFDGDCLHGYIPQSIRSRIELGELVSLHQQLLNMQDGRSLVSLTHDS 242
Query: 309 XVAAFLLTSSHIFLEAYQMQQLHLFC--SSEIPMPAILKAPKLQGPLWTGKQLFQMTLPS 136
AA LLTS+ +FL+ ++QQL + C S P+PAI+K+ +G LWTGKQ F M LPS
Sbjct: 243 LAAAHLLTSTDVFLKESELQQLQMLCLSVSTTPVPAIIKSMNFEGSLWTGKQFFSMLLPS 302
Query: 135 NLNYK-SSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDFPSSA 1
+N+ S++ I + E+L+CS S WL S + L + + + A
Sbjct: 303 GMNFSCDSKLHIIDSEVLTCSSGSSWLQNSTTGLFSIMFKQYGRKA 348
>ref|XP_004970756.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X3
[Setaria italica]
Length = 1362
Score = 145 bits (365), Expect = 7e-33
Identities = 73/166 (43%), Positives = 102/166 (61%), Gaps = 3/166 (1%)
Frame = -3
Query: 489 ISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXXX 310
+SINP+ C PF DFDGDCLHG+IPQS+ S+ E ++SL +QLLN Q G
Sbjct: 364 VSINPLCCMPFLGDFDGDCLHGYIPQSIRSRIELGELVSLHQQLLNMQDGRSLVSLTHDS 423
Query: 309 XVAAFLLTSSHIFLEAYQMQQLHLFC--SSEIPMPAILKAPKLQGPLWTGKQLFQMTLPS 136
AA LLTS+ +FL+ ++QQL + C S P+PAI+K+ +G LWTGKQ F M LPS
Sbjct: 424 LAAAHLLTSTDVFLKESELQQLQMLCLSVSTTPVPAIIKSMNFEGSLWTGKQFFSMLLPS 483
Query: 135 NLNYK-SSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDFPSSA 1
+N+ S++ I + E+L+CS S WL S + L + + + A
Sbjct: 484 GMNFSCDSKLHIIDSEVLTCSSGSSWLQNSTTGLFSIMFKQYGRKA 529
>ref|XP_004970755.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X2
[Setaria italica]
Length = 1450
Score = 145 bits (365), Expect = 7e-33
Identities = 73/166 (43%), Positives = 102/166 (61%), Gaps = 3/166 (1%)
Frame = -3
Query: 489 ISINPIVCAPFGADFDGDCLHGFIPQSLHSKAEALNIMSLSKQLLNSQCGXXXXXXXXXX 310
+SINP+ C PF DFDGDCLHG+IPQS+ S+ E ++SL +QLLN Q G
Sbjct: 452 VSINPLCCMPFLGDFDGDCLHGYIPQSIRSRIELGELVSLHQQLLNMQDGRSLVSLTHDS 511
Query: 309 XVAAFLLTSSHIFLEAYQMQQLHLFC--SSEIPMPAILKAPKLQGPLWTGKQLFQMTLPS 136
AA LLTS+ +FL+ ++QQL + C S P+PAI+K+ +G LWTGKQ F M LPS
Sbjct: 512 LAAAHLLTSTDVFLKESELQQLQMLCLSVSTTPVPAIIKSMNFEGSLWTGKQFFSMLLPS 571
Query: 135 NLNYK-SSEVFISEGEILSCSGTSKWLSQSDSSLMQKIIRDFPSSA 1
+N+ S++ I + E+L+CS S WL S + L + + + A
Sbjct: 572 GMNFSCDSKLHIIDSEVLTCSSGSSWLQNSTTGLFSIMFKQYGRKA 617