BLASTX nr result
ID: Ephedra25_contig00027751
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00027751
(451 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR17838.1| unknown [Picea sitchensis] 77 2e-12
ref|XP_002521253.1| pentatricopeptide repeat-containing protein,... 76 5e-12
gb|ADE77588.1| unknown [Picea sitchensis] 75 7e-12
gb|ADE75673.1| unknown [Picea sitchensis] 74 2e-11
gb|EMJ09476.1| hypothetical protein PRUPE_ppa015109mg [Prunus pe... 74 3e-11
ref|XP_003624481.1| Pentatricopeptide repeat-containing protein ... 72 8e-11
ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containi... 72 8e-11
gb|EMJ04502.1| hypothetical protein PRUPE_ppa025850mg, partial [... 72 1e-10
ref|XP_006481440.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
ref|XP_006476161.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
ref|XP_006450596.1| hypothetical protein CICLE_v10010742mg [Citr... 71 1e-10
gb|EOY19557.1| Pentatricopeptide repeat (PPR) superfamily protei... 71 1e-10
emb|CBI39775.3| unnamed protein product [Vitis vinifera] 71 1e-10
ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera] 71 1e-10
gb|EMJ00196.1| hypothetical protein PRUPE_ppa002025mg [Prunus pe... 71 2e-10
gb|EXB24037.1| hypothetical protein L484_006069 [Morus notabilis] 70 2e-10
ref|XP_004230005.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-10
gb|EXC21533.1| hypothetical protein L484_014888 [Morus notabilis] 70 3e-10
gb|EXC74564.1| hypothetical protein L484_000327 [Morus notabilis] 70 4e-10
>gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/75 (46%), Positives = 50/75 (66%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKTATCDVT 182
N+EL E+A +HLF L+PDN GYYV++SNIYA+A RW DVA+++ +MK+ +K C V
Sbjct: 607 NIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVV 666
Query: 183 ETGHESCLSLVEGKT 227
+ LV +T
Sbjct: 667 AVHRDVQTFLVGDRT 681
>ref|XP_002521253.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539521|gb|EEF41109.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 484
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/84 (44%), Positives = 55/84 (65%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKTATCDVT 182
N+ LAE A +H+F L DN G YV++SN+YA+AGRW DV ++K LMKK KT +C +
Sbjct: 296 NIALAELAAKHIFSLEHDNTGCYVLLSNMYAEAGRWEDVEQIKTLMKKKGIVKTVSCCMV 355
Query: 183 ETGHESCLSLVEGKTASLV*IVND 254
ET +S + + K+ S + ++ D
Sbjct: 356 ETNGKSHKFINQDKSHSQINMIYD 379
>gb|ADE77588.1| unknown [Picea sitchensis]
Length = 312
Score = 75.5 bits (184), Expect = 7e-12
Identities = 32/65 (49%), Positives = 48/65 (73%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKTATCDVT 182
N+EL ER E L L+PDN GYYV++SNIYA AGRW+DVA+++ +MK+ + +K+ C +
Sbjct: 124 NIELGERVAELLLNLDPDNAGYYVLLSNIYAAAGRWDDVAKVRKMMKEKDVKKSPGCSLI 183
Query: 183 ETGHE 197
E ++
Sbjct: 184 EVNNK 188
>gb|ADE75673.1| unknown [Picea sitchensis]
Length = 246
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKTATCDVT 182
N+ELAE EHLF L +N GYYV++ NIYA G+W+DVA+++ LM + RKTA C
Sbjct: 58 NIELAECVAEHLFKLESENVGYYVVLCNIYAATGKWDDVAKVRTLMNEKGLRKTAECSFI 117
Query: 183 ETGH 194
E +
Sbjct: 118 EVNN 121
>gb|EMJ09476.1| hypothetical protein PRUPE_ppa015109mg [Prunus persica]
Length = 525
Score = 73.6 bits (179), Expect = 3e-11
Identities = 30/57 (52%), Positives = 44/57 (77%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKTATC 173
NVELA A +HLF LNP++ GYY+++SN+YA+AGRW++V R+++LMK +K C
Sbjct: 439 NVELASWAADHLFRLNPEHCGYYILLSNMYAEAGRWDEVNRVRELMKSRGVKKNRAC 495
>ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 672
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKTATCDVT 182
NVEL E + LF L+P N GYYV++SNIYA AGRW+DV RM+ LMK H KT +
Sbjct: 484 NVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIV 543
Query: 183 E 185
E
Sbjct: 544 E 544
>ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product
[Vitis vinifera]
Length = 802
Score = 72.0 bits (175), Expect = 8e-11
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 14/153 (9%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKTATCDVT 182
+VELAE A EH+ L DN G YV++SN+YA+AGRW DV R+K MKK K+ C V
Sbjct: 614 DVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCSVV 673
Query: 183 ETGHESCLSLVEGKTASLV*IVNDSF--------AHIFVHKLLKLFSPLD------NEVN 320
+ ++ + + ++ + + +V D ++VH L K F P D N
Sbjct: 674 DLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYVHSLTK-FRPSDLEKKRANSAK 732
Query: 321 QGTYFLLLCSVGCLNVPISTNFIEQSYCRKCNS 419
+ L +C G ++ I + + R C +
Sbjct: 733 SHSLRLAIC-FGLISTTIGNPVLVRKNIRICEA 764
>gb|EMJ04502.1| hypothetical protein PRUPE_ppa025850mg, partial [Prunus persica]
Length = 554
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/53 (56%), Positives = 42/53 (79%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRK 161
N++LAE+AV L L P+N G+YV++SNIYA+AGRW DVA+M+DLM + +K
Sbjct: 366 NIDLAEKAVNSLLELQPENAGHYVLLSNIYARAGRWKDVAKMRDLMSQRRLKK 418
>ref|XP_006481440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like, partial [Citrus sinensis]
Length = 436
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKTATCDVT 182
N+E+A A+EHL L P++ G YV++SNIYAK GRW DV+RM+ L++ + +KT C +
Sbjct: 328 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 387
Query: 183 ETGHE 197
E +E
Sbjct: 388 EVNNE 392
>ref|XP_006476161.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Citrus sinensis]
Length = 541
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKTATCDVT 182
N+E+A A+EHL L P++ G YV++SNIYAK GRW DV+RM+ L++ + +KT C +
Sbjct: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKHGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
Query: 183 ETGHE 197
E +E
Sbjct: 493 EVNNE 497
>ref|XP_006450596.1| hypothetical protein CICLE_v10010742mg [Citrus clementina]
gi|557553822|gb|ESR63836.1| hypothetical protein
CICLE_v10010742mg [Citrus clementina]
Length = 605
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKTATCDVT 182
N+E+A A+EHL L P++ G YV++SNIYAK GRW DV+RM+ L++ + +KT C +
Sbjct: 433 NLEIAVIAMEHLLVLEPEDTGNYVLLSNIYAKNGRWEDVSRMRKLIRSKSMKKTPGCSLI 492
Query: 183 ETGHE 197
E +E
Sbjct: 493 EVNNE 497
>gb|EOY19557.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 886
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/65 (50%), Positives = 43/65 (66%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKTATCDVT 182
NVEL E+A LF LNPD GY+V+++NIYA A W VA+++ LMKK +KT C V
Sbjct: 699 NVELGEKAANKLFALNPDEGGYHVLLANIYAMASMWGKVAKVRTLMKKKGLQKTPGCSVV 758
Query: 183 ETGHE 197
E +E
Sbjct: 759 ELRNE 763
>emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKT 164
NVE+AE A++HL L+P N GYYV++SNIYA+AGRW D AR++ MK +KT
Sbjct: 411 NVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKT 464
>ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKT 164
NVE+AE A++HL L+P N GYYV++SNIYA+AGRW D AR++ MK +KT
Sbjct: 444 NVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKT 497
>emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKT 164
NVE+AE A++HL L+P N GYYV++SNIYA+AGRW D AR++ MK +KT
Sbjct: 444 NVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKT 497
>gb|EMJ00196.1| hypothetical protein PRUPE_ppa002025mg [Prunus persica]
Length = 727
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/62 (51%), Positives = 41/62 (66%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKTATCDVT 182
N+ELAE A E + L DN G YV++SN+YA+AGRW DV R+K LM++ KT C
Sbjct: 539 NIELAELAAERILALEHDNTGCYVLLSNMYAEAGRWEDVERIKSLMRQRGLEKTVGCSFV 598
Query: 183 ET 188
ET
Sbjct: 599 ET 600
>gb|EXB24037.1| hypothetical protein L484_006069 [Morus notabilis]
Length = 797
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKTATCDVT 182
N+ELAE A EH+F L DN G YV++SN+YA+A RW DV R+K LMK+ +KT +
Sbjct: 607 NIELAEHAAEHIFALEHDNTGCYVLLSNLYAEAERWADVERIKSLMKQRGIKKTVGWSLV 666
Query: 183 ET 188
E+
Sbjct: 667 ES 668
>ref|XP_004230005.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Solanum lycopersicum]
Length = 508
Score = 70.5 bits (171), Expect = 2e-10
Identities = 38/75 (50%), Positives = 47/75 (62%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKTATCDVT 182
NVELAE+A E L L P N G YVI+SNIYA+AGRW+ VAR++ LMK K A
Sbjct: 400 NVELAEKAAEFLSVLEPWNPGNYVILSNIYARAGRWDGVARLRKLMKSSQITKAAGYSFI 459
Query: 183 ETGHESCLSLVEGKT 227
E G + +VE K+
Sbjct: 460 EEGGDIHKFIVEDKS 474
>gb|EXC21533.1| hypothetical protein L484_014888 [Morus notabilis]
Length = 636
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKT---ATC 173
N+ LAE A+ HL L+P N GYYV++SNIYA+A RW DVAR++ LM++ +KT +T
Sbjct: 448 NIVLAEEAIRHLAVLDPLNDGYYVVLSNIYAEAERWEDVARVRKLMRERGVKKTPGWSTI 507
Query: 174 DVTETGHE 197
V T HE
Sbjct: 508 TVDGTVHE 515
>gb|EXC74564.1| hypothetical protein L484_000327 [Morus notabilis]
Length = 590
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = +3
Query: 3 NVELAERAVEHLFYLNPDNYGYYVIMSNIYAKAGRWNDVARMKDLMKKHNFRKTATCDVT 182
NVELA + E +F ++P N G YVI+SNIYA A RW DVAR++ MKK RK C
Sbjct: 402 NVELAAKVAEKIFTVDPGNMGAYVILSNIYAAARRWKDVARLRVSMKKRGMRKKPACSWI 461
Query: 183 ETGHE 197
E G++
Sbjct: 462 EVGNK 466