BLASTX nr result

ID: Ephedra25_contig00027425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00027425
         (635 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002971557.1| hypothetical protein SELMODRAFT_95860 [Selag...    56   1e-05

>ref|XP_002971557.1| hypothetical protein SELMODRAFT_95860 [Selaginella moellendorffii]
           gi|159902509|gb|ABX10761.1| putative F-box GID2 protein
           [Selaginella moellendorffii] gi|300160689|gb|EFJ27306.1|
           hypothetical protein SELMODRAFT_95860 [Selaginella
           moellendorffii]
          Length = 342

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
 Frame = -1

Query: 599 IRKMMRVSWILIDRKSGCAINLSTPGWTPFDVRSSYEGGYCCLPDSCFSTCGNKNNDFFV 420
           I + M++SWILID+ S  A NLS+  W P   +  +                  + DF +
Sbjct: 181 ISEGMKLSWILIDKGSKQAANLSS--WRPVLGQRHWP----------------TDMDFIL 222

Query: 419 KFGSIVGFHGPFKKPVRCVVQVNCKLLHEME---KIRVMELGFHFEYVGEG-HLSGIESI 252
           ++GSI+    P  KPV C + + C+LL       +I++ EL    + VG G HL+G + +
Sbjct: 223 RYGSILSQCLP--KPVECSIILKCRLLRSSGSSIEIKLTELSMQLKDVGSGEHLNGRDGL 280

Query: 251 QMMNEVVNF--CRKTTRV----EHALGLQNEMVRLHDMR 153
            ++ + V+F  CR   RV       L  QNE+ ++H+++
Sbjct: 281 PVLCQAVSFAKCRDEERVLRTHRELLKRQNEL-KVHELK 318


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