BLASTX nr result

ID: Ephedra25_contig00027381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00027381
         (508 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318526.2| pentatricopeptide repeat-containing family p...    80   2e-13
ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containi...    80   4e-13
emb|CBI20961.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_004972232.1| PREDICTED: putative pentatricopeptide repeat...    79   6e-13
ref|NP_001044643.1| Os01g0819800 [Oryza sativa Japonica Group] g...    78   1e-12
gb|EAZ35608.1| hypothetical protein OsJ_19898 [Oryza sativa Japo...    78   1e-12
gb|EAY76294.1| hypothetical protein OsI_04228 [Oryza sativa Indi...    78   1e-12
ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis th...    78   1e-12
ref|XP_003631084.1| Pentatricopeptide repeat-containing protein ...    77   2e-12
ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [S...    77   2e-12
gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]    77   2e-12
ref|XP_004503293.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
gb|EMT17149.1| hypothetical protein F775_01863 [Aegilops tauschii]     77   3e-12
ref|XP_003567226.1| PREDICTED: putative pentatricopeptide repeat...    77   3e-12
ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containi...    76   4e-12
ref|XP_003524346.2| PREDICTED: pentatricopeptide repeat-containi...    76   5e-12
gb|EMJ11953.1| hypothetical protein PRUPE_ppa021168mg [Prunus pe...    76   5e-12
gb|EMJ08247.1| hypothetical protein PRUPE_ppb025182mg [Prunus pe...    76   5e-12
emb|CAJ32535.1| pentatricopeptide repeat-containing protein [Hor...    76   5e-12

>ref|XP_002318526.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550326387|gb|EEE96746.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 578

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 44/106 (41%), Positives = 64/106 (60%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G +D+  +YF SM RDY I+  L HYTC+V LL RA +L EA+ L+K +P + D +  
Sbjct: 319 HAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATW 378

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
            ++LG+ R   GN   G+  A    E++  +SG Y L+ KLY  +G
Sbjct: 379 GALLGASR-IHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASG 423


>ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Vitis vinifera]
          Length = 541

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 45/102 (44%), Positives = 64/102 (62%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G L+E L+YFESMKRDY+I P + HY C+V+LL  + +L++A ELIK +P+K D +  
Sbjct: 362 HAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIW 421

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLY 199
            S+L S R    NL          +EL+ +D+G Y L+  LY
Sbjct: 422 GSLLSSCRS-HSNLEIAVIAMEHLLELEPADTGNYVLLSNLY 462


>emb|CBI20961.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 45/102 (44%), Positives = 63/102 (61%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G L+E L+YFESMKRDY+I P + HY C+V+LL  + +L++A EL+K +P K D    
Sbjct: 378 HAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIW 437

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLY 199
            S+L S R   GNL          +EL+ +D+G Y L+  LY
Sbjct: 438 GSLLSSCRS-HGNLKIAVIAMEHLLELEPADTGNYVLLSNLY 478


>ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
           [Vitis vinifera]
          Length = 537

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 45/102 (44%), Positives = 63/102 (61%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G L+E L+YFESMKRDY+I P + HY C+V+LL  + +L++A EL+K +P K D    
Sbjct: 362 HAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIW 421

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLY 199
            S+L S R   GNL          +EL+ +D+G Y L+  LY
Sbjct: 422 GSLLSSCRS-HGNLKIAVIAMEHLLELEPADTGNYVLLSNLY 462


>ref|XP_004972232.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Setaria italica]
          Length = 640

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 42/108 (38%), Positives = 65/108 (60%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G  DE  KYF +M+  Y + PTL HYTC+V LL RA +L EA+ELI  +P+  DG+  
Sbjct: 381 HAGMYDEGRKYFSTMESAYKLRPTLEHYTCMVDLLGRAGRLEEARELISSMPMPADGAVW 440

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNGSV 181
            ++LG+ +    N   G++     VEL+ +++G Y L+  +Y+  G +
Sbjct: 441 GALLGACK-IHKNAEVGEEAFEHIVELEPTNAGYYVLMSNIYIDTGQL 487


>ref|NP_001044643.1| Os01g0819800 [Oryza sativa Japonica Group]
           gi|21104789|dbj|BAB93376.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113534174|dbj|BAF06557.1| Os01g0819800 [Oryza
           sativa Japonica Group]
          Length = 646

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 42/108 (38%), Positives = 65/108 (60%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G  DE  KYF +M+RDY + P L HYTC+V LL RA +L+EA+ELI  +P+  DG+  
Sbjct: 386 HAGMYDEGRKYFSTMERDYCLRPKLEHYTCMVDLLGRAGRLDEARELIASMPMAADGAVW 445

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNGSV 181
            ++LG+ +    N+  G++     V L+ ++ G Y L+  +Y   G +
Sbjct: 446 GALLGACK-IHKNVEMGEEAFERVVSLEPANVGYYVLMANIYADAGQL 492


>gb|EAZ35608.1| hypothetical protein OsJ_19898 [Oryza sativa Japonica Group]
          Length = 602

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 42/108 (38%), Positives = 65/108 (60%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G  DE  KYF +M+RDY + P L HYTC+V LL RA +L+EA+ELI  +P+  DG+  
Sbjct: 342 HAGMYDEGRKYFSTMERDYCLRPKLEHYTCMVDLLGRAGRLDEARELIASMPMAADGAVW 401

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNGSV 181
            ++LG+ +    N+  G++     V L+ ++ G Y L+  +Y   G +
Sbjct: 402 GALLGACK-IHKNVEMGEEAFERVVSLEPANVGYYVLMANIYADAGQL 448


>gb|EAY76294.1| hypothetical protein OsI_04228 [Oryza sativa Indica Group]
          Length = 646

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 42/108 (38%), Positives = 65/108 (60%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G  DE  KYF +M+RDY + P L HYTC+V LL RA +L+EA+ELI  +P+  DG+  
Sbjct: 386 HAGMYDEGRKYFSTMERDYCLRPKLEHYTCMVDLLGRAGRLDEARELIASMPMAADGAVW 445

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNGSV 181
            ++LG+ +    N+  G++     V L+ ++ G Y L+  +Y   G +
Sbjct: 446 GALLGACK-IHKNVEMGEEAFERVVSLEPANVGYYVLMANIYADAGQL 492


>ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
           gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g20540 gi|4586036|gb|AAD25654.1| unknown protein
           [Arabidopsis thaliana] gi|67633530|gb|AAY78689.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|330251931|gb|AEC07025.1| mitochondrial
           editing factor 21 [Arabidopsis thaliana]
          Length = 534

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 42/102 (41%), Positives = 57/102 (55%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           HVG   E L+YF+ M++DY I P + HY C++ +L RA KL  A E+ K +P+K D    
Sbjct: 354 HVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIW 413

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLY 199
            S+L S R P GNL          VEL+  D G Y L+  +Y
Sbjct: 414 GSLLSSCRTP-GNLDVALVAMDHLVELEPEDMGNYVLLANIY 454


>ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355525106|gb|AET05560.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 980

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 40/106 (37%), Positives = 63/106 (59%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G LD   +YF SM +DY + PT  HYTC++ LL RA +L EA++LI+ +P +   ++ 
Sbjct: 507 HTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASW 566

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
            ++LG+ R   GN   G+  A    +++  +SG Y L+  LY  +G
Sbjct: 567 GALLGASR-IHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 611


>ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
           gi|241928520|gb|EES01665.1| hypothetical protein
           SORBIDRAFT_03g038140 [Sorghum bicolor]
          Length = 640

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 41/108 (37%), Positives = 64/108 (59%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G  DE  +YF +M+  Y + PTL HYTC+V LL RA +L EA+ELI  +P+  DG+  
Sbjct: 379 HAGLYDEGRRYFSAMESVYKLRPTLEHYTCMVDLLGRAGRLEEARELISSMPMPADGAVW 438

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNGSV 181
            ++LG+ +    N+  G++  T  +EL+  + G Y L+  +Y   G +
Sbjct: 439 GALLGACK-IHKNVDVGEEAFTRVIELEPKNVGYYVLMSNIYTDTGQL 485


>gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 40/106 (37%), Positives = 63/106 (59%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G LD   +YF SM +DY + PT  HYTC++ LL RA +L EA++LI+ +P +   ++ 
Sbjct: 507 HTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASW 566

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
            ++LG+ R   GN   G+  A    +++  +SG Y L+  LY  +G
Sbjct: 567 GALLGASR-IHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 611


>ref|XP_004503293.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cicer arietinum]
          Length = 763

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 38/106 (35%), Positives = 65/106 (61%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G LD   +YF SM++DY ++P+  HYTC++ LL RA +L EA++L++ +P +   ++ 
Sbjct: 504 HTGLLDRGTEYFYSMQKDYGVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPGAASW 563

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
            ++LG+ R   GN   G+  A    +++  +SG Y L+  LY  +G
Sbjct: 564 GALLGASR-IHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 608


>gb|EMT17149.1| hypothetical protein F775_01863 [Aegilops tauschii]
          Length = 562

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 41/106 (38%), Positives = 63/106 (59%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H GK +E  KYF +M+R Y + PTL HY C+V LL R  +L EA+ELI  +P+  DGS  
Sbjct: 324 HAGKYEEGCKYFFAMERTYKLRPTLEHYACMVDLLGRTGRLEEARELISSMPMPADGSVW 383

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
            ++LG+ +    N+  G++     + L+ S+ G Y L+  +Y  +G
Sbjct: 384 GALLGACK-IHKNVEAGEEAFKHVIMLEPSNVGYYVLMANMYTDSG 428


>ref|XP_003567226.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Brachypodium distachyon]
          Length = 648

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 40/108 (37%), Positives = 64/108 (59%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G  DE  KYF +M+  Y + PTL HYTC+V LL RA +L EA+ELI  +P+  DG+  
Sbjct: 387 HAGMYDEGRKYFSAMESAYQLRPTLEHYTCMVDLLGRAGRLKEARELISSMPMPADGAVW 446

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNGSV 181
            ++LG+ +    N+  G++     +E++ ++ G Y L+  +Y   G +
Sbjct: 447 GALLGACK-IHKNVEIGEEAFEHVIEVEPTNVGYYVLMANIYTDTGQL 493


>ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
           [Vitis vinifera] gi|296088358|emb|CBI36803.3| unnamed
           protein product [Vitis vinifera]
          Length = 652

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 41/106 (38%), Positives = 62/106 (58%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G  D+  + FE MK DY ISPT+ HY C+V +L RA ++ EA E++K +P K  GS  
Sbjct: 392 HAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIW 451

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
            S+L S R   GN+   + +A    EL+ +++G Y ++  +Y   G
Sbjct: 452 GSLLNSCR-LHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAG 496


>ref|XP_003524346.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 769

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 39/106 (36%), Positives = 62/106 (58%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G +D   +YF SM RDY++ PT  HYTC++ LL RA +L EA+ L++ +P     ++ 
Sbjct: 510 HSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASW 569

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
            ++LG+ R   GN   G+  A    +++  +SG Y L+  LY  +G
Sbjct: 570 GALLGASR-IHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 614


>gb|EMJ11953.1| hypothetical protein PRUPE_ppa021168mg [Prunus persica]
          Length = 462

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 40/102 (39%), Positives = 62/102 (60%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G +++ +KY+ESM +DY+I P   HYTCVV +L RA KLNEA  L+K +P+     AL
Sbjct: 318 HAGLVEDGMKYWESMVKDYNIEPDADHYTCVVDMLGRAGKLNEAHNLVKRMPMGPQPGAL 377

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLY 199
            ++L + R   GN+   + +A     L+  ++G Y L+  +Y
Sbjct: 378 GALLAACR-TYGNVEIAESVAEKLFVLEPGNTGNYMLLSSIY 418


>gb|EMJ08247.1| hypothetical protein PRUPE_ppb025182mg [Prunus persica]
          Length = 672

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 41/106 (38%), Positives = 65/106 (61%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H G +D+ L +F SMK+ Y I P + HY C+V +  RA +L EA++LI  +PIK + + L
Sbjct: 413 HSGFVDKGLNFFSSMKQFYGIEPEVEHYGCMVDMFGRAGQLEEAEQLINSMPIKPNAAVL 472

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
            ++LG+ R   GN   G+ +    +EL+  +SG+YAL+  +Y   G
Sbjct: 473 GALLGACR-IHGNAEMGERVGRILLELEPQNSGRYALLSNIYAKAG 517


>emb|CAJ32535.1| pentatricopeptide repeat-containing protein [Hordeum vulgare subsp.
           vulgare]
          Length = 652

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 41/106 (38%), Positives = 63/106 (59%)
 Frame = -2

Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
           H GK +E  KYF +M+  Y + PTL HY C+V LL RA +L EA+ELI  +P+  DGS  
Sbjct: 389 HAGKYEEGCKYFFAMESTYKLRPTLEHYACMVDLLGRAGRLEEARELISSMPMPADGSVW 448

Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
            ++LG+ +    N+  G++     + L+ S+ G Y L+  +Y  +G
Sbjct: 449 GALLGACK-IHKNVEAGEEAFKHVIMLEPSNVGYYVLMANMYTDSG 493


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