BLASTX nr result
ID: Ephedra25_contig00027381
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00027381
(508 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002318526.2| pentatricopeptide repeat-containing family p... 80 2e-13
ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
emb|CBI20961.3| unnamed protein product [Vitis vinifera] 79 5e-13
ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containi... 79 5e-13
ref|XP_004972232.1| PREDICTED: putative pentatricopeptide repeat... 79 6e-13
ref|NP_001044643.1| Os01g0819800 [Oryza sativa Japonica Group] g... 78 1e-12
gb|EAZ35608.1| hypothetical protein OsJ_19898 [Oryza sativa Japo... 78 1e-12
gb|EAY76294.1| hypothetical protein OsI_04228 [Oryza sativa Indi... 78 1e-12
ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis th... 78 1e-12
ref|XP_003631084.1| Pentatricopeptide repeat-containing protein ... 77 2e-12
ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [S... 77 2e-12
gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula] 77 2e-12
ref|XP_004503293.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
gb|EMT17149.1| hypothetical protein F775_01863 [Aegilops tauschii] 77 3e-12
ref|XP_003567226.1| PREDICTED: putative pentatricopeptide repeat... 77 3e-12
ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containi... 76 4e-12
ref|XP_003524346.2| PREDICTED: pentatricopeptide repeat-containi... 76 5e-12
gb|EMJ11953.1| hypothetical protein PRUPE_ppa021168mg [Prunus pe... 76 5e-12
gb|EMJ08247.1| hypothetical protein PRUPE_ppb025182mg [Prunus pe... 76 5e-12
emb|CAJ32535.1| pentatricopeptide repeat-containing protein [Hor... 76 5e-12
>ref|XP_002318526.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550326387|gb|EEE96746.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 578
Score = 80.5 bits (197), Expect = 2e-13
Identities = 44/106 (41%), Positives = 64/106 (60%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G +D+ +YF SM RDY I+ L HYTC+V LL RA +L EA+ L+K +P + D +
Sbjct: 319 HAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATW 378
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
++LG+ R GN G+ A E++ +SG Y L+ KLY +G
Sbjct: 379 GALLGASR-IHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASG 423
>ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 79.7 bits (195), Expect = 4e-13
Identities = 45/102 (44%), Positives = 64/102 (62%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G L+E L+YFESMKRDY+I P + HY C+V+LL + +L++A ELIK +P+K D +
Sbjct: 362 HAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIW 421
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLY 199
S+L S R NL +EL+ +D+G Y L+ LY
Sbjct: 422 GSLLSSCRS-HSNLEIAVIAMEHLLELEPADTGNYVLLSNLY 462
>emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 79.3 bits (194), Expect = 5e-13
Identities = 45/102 (44%), Positives = 63/102 (61%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G L+E L+YFESMKRDY+I P + HY C+V+LL + +L++A EL+K +P K D
Sbjct: 378 HAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIW 437
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLY 199
S+L S R GNL +EL+ +D+G Y L+ LY
Sbjct: 438 GSLLSSCRS-HGNLKIAVIAMEHLLELEPADTGNYVLLSNLY 478
>ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 79.3 bits (194), Expect = 5e-13
Identities = 45/102 (44%), Positives = 63/102 (61%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G L+E L+YFESMKRDY+I P + HY C+V+LL + +L++A EL+K +P K D
Sbjct: 362 HAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIW 421
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLY 199
S+L S R GNL +EL+ +D+G Y L+ LY
Sbjct: 422 GSLLSSCRS-HGNLKIAVIAMEHLLELEPADTGNYVLLSNLY 462
>ref|XP_004972232.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Setaria italica]
Length = 640
Score = 79.0 bits (193), Expect = 6e-13
Identities = 42/108 (38%), Positives = 65/108 (60%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G DE KYF +M+ Y + PTL HYTC+V LL RA +L EA+ELI +P+ DG+
Sbjct: 381 HAGMYDEGRKYFSTMESAYKLRPTLEHYTCMVDLLGRAGRLEEARELISSMPMPADGAVW 440
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNGSV 181
++LG+ + N G++ VEL+ +++G Y L+ +Y+ G +
Sbjct: 441 GALLGACK-IHKNAEVGEEAFEHIVELEPTNAGYYVLMSNIYIDTGQL 487
>ref|NP_001044643.1| Os01g0819800 [Oryza sativa Japonica Group]
gi|21104789|dbj|BAB93376.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|113534174|dbj|BAF06557.1| Os01g0819800 [Oryza
sativa Japonica Group]
Length = 646
Score = 77.8 bits (190), Expect = 1e-12
Identities = 42/108 (38%), Positives = 65/108 (60%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G DE KYF +M+RDY + P L HYTC+V LL RA +L+EA+ELI +P+ DG+
Sbjct: 386 HAGMYDEGRKYFSTMERDYCLRPKLEHYTCMVDLLGRAGRLDEARELIASMPMAADGAVW 445
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNGSV 181
++LG+ + N+ G++ V L+ ++ G Y L+ +Y G +
Sbjct: 446 GALLGACK-IHKNVEMGEEAFERVVSLEPANVGYYVLMANIYADAGQL 492
>gb|EAZ35608.1| hypothetical protein OsJ_19898 [Oryza sativa Japonica Group]
Length = 602
Score = 77.8 bits (190), Expect = 1e-12
Identities = 42/108 (38%), Positives = 65/108 (60%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G DE KYF +M+RDY + P L HYTC+V LL RA +L+EA+ELI +P+ DG+
Sbjct: 342 HAGMYDEGRKYFSTMERDYCLRPKLEHYTCMVDLLGRAGRLDEARELIASMPMAADGAVW 401
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNGSV 181
++LG+ + N+ G++ V L+ ++ G Y L+ +Y G +
Sbjct: 402 GALLGACK-IHKNVEMGEEAFERVVSLEPANVGYYVLMANIYADAGQL 448
>gb|EAY76294.1| hypothetical protein OsI_04228 [Oryza sativa Indica Group]
Length = 646
Score = 77.8 bits (190), Expect = 1e-12
Identities = 42/108 (38%), Positives = 65/108 (60%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G DE KYF +M+RDY + P L HYTC+V LL RA +L+EA+ELI +P+ DG+
Sbjct: 386 HAGMYDEGRKYFSTMERDYCLRPKLEHYTCMVDLLGRAGRLDEARELIASMPMAADGAVW 445
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNGSV 181
++LG+ + N+ G++ V L+ ++ G Y L+ +Y G +
Sbjct: 446 GALLGACK-IHKNVEMGEEAFERVVSLEPANVGYYVLMANIYADAGQL 492
>ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g20540 gi|4586036|gb|AAD25654.1| unknown protein
[Arabidopsis thaliana] gi|67633530|gb|AAY78689.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana] gi|330251931|gb|AEC07025.1| mitochondrial
editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 77.8 bits (190), Expect = 1e-12
Identities = 42/102 (41%), Positives = 57/102 (55%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
HVG E L+YF+ M++DY I P + HY C++ +L RA KL A E+ K +P+K D
Sbjct: 354 HVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIW 413
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLY 199
S+L S R P GNL VEL+ D G Y L+ +Y
Sbjct: 414 GSLLSSCRTP-GNLDVALVAMDHLVELEPEDMGNYVLLANIY 454
>ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 980
Score = 77.4 bits (189), Expect = 2e-12
Identities = 40/106 (37%), Positives = 63/106 (59%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G LD +YF SM +DY + PT HYTC++ LL RA +L EA++LI+ +P + ++
Sbjct: 507 HTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASW 566
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
++LG+ R GN G+ A +++ +SG Y L+ LY +G
Sbjct: 567 GALLGASR-IHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 611
>ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
gi|241928520|gb|EES01665.1| hypothetical protein
SORBIDRAFT_03g038140 [Sorghum bicolor]
Length = 640
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/108 (37%), Positives = 64/108 (59%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G DE +YF +M+ Y + PTL HYTC+V LL RA +L EA+ELI +P+ DG+
Sbjct: 379 HAGLYDEGRRYFSAMESVYKLRPTLEHYTCMVDLLGRAGRLEEARELISSMPMPADGAVW 438
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNGSV 181
++LG+ + N+ G++ T +EL+ + G Y L+ +Y G +
Sbjct: 439 GALLGACK-IHKNVDVGEEAFTRVIELEPKNVGYYVLMSNIYTDTGQL 485
>gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 77.4 bits (189), Expect = 2e-12
Identities = 40/106 (37%), Positives = 63/106 (59%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G LD +YF SM +DY + PT HYTC++ LL RA +L EA++LI+ +P + ++
Sbjct: 507 HTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASW 566
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
++LG+ R GN G+ A +++ +SG Y L+ LY +G
Sbjct: 567 GALLGASR-IHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 611
>ref|XP_004503293.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cicer arietinum]
Length = 763
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/106 (35%), Positives = 65/106 (61%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G LD +YF SM++DY ++P+ HYTC++ LL RA +L EA++L++ +P + ++
Sbjct: 504 HTGLLDRGTEYFYSMQKDYGVTPSSKHYTCMIDLLGRAGRLEEAQDLMRNMPFEPGAASW 563
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
++LG+ R GN G+ A +++ +SG Y L+ LY +G
Sbjct: 564 GALLGASR-IHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 608
>gb|EMT17149.1| hypothetical protein F775_01863 [Aegilops tauschii]
Length = 562
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/106 (38%), Positives = 63/106 (59%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H GK +E KYF +M+R Y + PTL HY C+V LL R +L EA+ELI +P+ DGS
Sbjct: 324 HAGKYEEGCKYFFAMERTYKLRPTLEHYACMVDLLGRTGRLEEARELISSMPMPADGSVW 383
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
++LG+ + N+ G++ + L+ S+ G Y L+ +Y +G
Sbjct: 384 GALLGACK-IHKNVEAGEEAFKHVIMLEPSNVGYYVLMANMYTDSG 428
>ref|XP_003567226.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Brachypodium distachyon]
Length = 648
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/108 (37%), Positives = 64/108 (59%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G DE KYF +M+ Y + PTL HYTC+V LL RA +L EA+ELI +P+ DG+
Sbjct: 387 HAGMYDEGRKYFSAMESAYQLRPTLEHYTCMVDLLGRAGRLKEARELISSMPMPADGAVW 446
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNGSV 181
++LG+ + N+ G++ +E++ ++ G Y L+ +Y G +
Sbjct: 447 GALLGACK-IHKNVEIGEEAFEHVIEVEPTNVGYYVLMANIYTDTGQL 493
>ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera] gi|296088358|emb|CBI36803.3| unnamed
protein product [Vitis vinifera]
Length = 652
Score = 76.3 bits (186), Expect = 4e-12
Identities = 41/106 (38%), Positives = 62/106 (58%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G D+ + FE MK DY ISPT+ HY C+V +L RA ++ EA E++K +P K GS
Sbjct: 392 HAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIW 451
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
S+L S R GN+ + +A EL+ +++G Y ++ +Y G
Sbjct: 452 GSLLNSCR-LHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAG 496
>ref|XP_003524346.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 769
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/106 (36%), Positives = 62/106 (58%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G +D +YF SM RDY++ PT HYTC++ LL RA +L EA+ L++ +P ++
Sbjct: 510 HSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASW 569
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
++LG+ R GN G+ A +++ +SG Y L+ LY +G
Sbjct: 570 GALLGASR-IHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 614
>gb|EMJ11953.1| hypothetical protein PRUPE_ppa021168mg [Prunus persica]
Length = 462
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/102 (39%), Positives = 62/102 (60%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G +++ +KY+ESM +DY+I P HYTCVV +L RA KLNEA L+K +P+ AL
Sbjct: 318 HAGLVEDGMKYWESMVKDYNIEPDADHYTCVVDMLGRAGKLNEAHNLVKRMPMGPQPGAL 377
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLY 199
++L + R GN+ + +A L+ ++G Y L+ +Y
Sbjct: 378 GALLAACR-TYGNVEIAESVAEKLFVLEPGNTGNYMLLSSIY 418
>gb|EMJ08247.1| hypothetical protein PRUPE_ppb025182mg [Prunus persica]
Length = 672
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/106 (38%), Positives = 65/106 (61%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H G +D+ L +F SMK+ Y I P + HY C+V + RA +L EA++LI +PIK + + L
Sbjct: 413 HSGFVDKGLNFFSSMKQFYGIEPEVEHYGCMVDMFGRAGQLEEAEQLINSMPIKPNAAVL 472
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
++LG+ R GN G+ + +EL+ +SG+YAL+ +Y G
Sbjct: 473 GALLGACR-IHGNAEMGERVGRILLELEPQNSGRYALLSNIYAKAG 517
>emb|CAJ32535.1| pentatricopeptide repeat-containing protein [Hordeum vulgare subsp.
vulgare]
Length = 652
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/106 (38%), Positives = 63/106 (59%)
Frame = -2
Query: 504 HVGKLDEALKYFESMKRDYDISPTLYHYTCVVHLLVRARKLNEAKELIKYIPIKLDGSAL 325
H GK +E KYF +M+ Y + PTL HY C+V LL RA +L EA+ELI +P+ DGS
Sbjct: 389 HAGKYEEGCKYFFAMESTYKLRPTLEHYACMVDLLGRAGRLEEARELISSMPMPADGSVW 448
Query: 324 LSMLGSGRDPGGNLTNGQDIATSPVELDKSDSGKYALV*KLYVVNG 187
++LG+ + N+ G++ + L+ S+ G Y L+ +Y +G
Sbjct: 449 GALLGACK-IHKNVEAGEEAFKHVIMLEPSNVGYYVLMANMYTDSG 493