BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00027346
         (812 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata] gi...   106   9e-21
ref|XP_006296758.1| hypothetical protein CARUB_v10015405mg [Caps...   105   1e-20
ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutr...   104   3e-20
ref|NP_187576.1| RNA binding protein HCF152 [Arabidopsis thalian...   104   3e-20
dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]           104   3e-20
gb|EPS62297.1| hypothetical protein M569_12494, partial [Genlise...   103   6e-20
emb|CBI32614.3| unnamed protein product [Vitis vinifera]              102   1e-19
ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containi...   102   1e-19
ref|XP_006843220.1| hypothetical protein AMTR_s00080p00039920 [A...   102   2e-19
gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily p...   101   4e-19
ref|XP_006361774.1| PREDICTED: pentatricopeptide repeat-containi...   100   5e-19
ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containi...   100   5e-19
gb|ABA95579.1| pentatricopeptide, putative, expressed [Oryza sat...    99   2e-18
ref|NP_001065238.1| Os12g0102600 [Oryza sativa Japonica Group] g...    99   2e-18
ref|NP_001065521.1| Os11g0103000 [Oryza sativa Japonica Group] g...    99   2e-18
gb|EAY81947.1| hypothetical protein OsI_37125 [Oryza sativa Indi...    99   2e-18
dbj|BAJ98927.1| predicted protein [Hordeum vulgare subsp. vulgare]     97   7e-18
ref|XP_004306228.1| PREDICTED: pentatricopeptide repeat-containi...    97   9e-18
ref|XP_006664261.1| PREDICTED: pentatricopeptide repeat-containi...    96   2e-17
ref|XP_002322855.2| hypothetical protein POPTR_0016s08650g [Popu...    96   2e-17

>ref|XP_002882632.1| HCF152 [Arabidopsis lyrata subsp. lyrata]
           gi|297328472|gb|EFH58891.1| HCF152 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 772

 Score =  106 bits (265), Expect = 9e-21
 Identities = 51/96 (53%), Positives = 71/96 (73%)
 Frame = -3

Query: 291 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 112
           PDT AFNA+ N CA +GD EK   +  EM  +D +PD  TYN++IKL AR++R++LI  V
Sbjct: 227 PDTAAFNAVLNACANLGDTEKYWKLFDEMSEWDCEPDVLTYNVMIKLCARVDRKELIVYV 286

Query: 111 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           +E ++ + I+ CM+T +SLVAAYVG  DL+TAER+V
Sbjct: 287 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIV 322


>ref|XP_006296758.1| hypothetical protein CARUB_v10015405mg [Capsella rubella]
           gi|482565467|gb|EOA29656.1| hypothetical protein
           CARUB_v10015405mg [Capsella rubella]
          Length = 781

 Score =  105 bits (263), Expect = 1e-20
 Identities = 51/96 (53%), Positives = 71/96 (73%)
 Frame = -3

Query: 291 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 112
           PDT AFNA+ N CA +GD EK   +  EM  +D +PD  TYN++IKL AR++R++LI  V
Sbjct: 236 PDTAAFNAVLNACANLGDTEKYWKLFYEMAEWDCEPDVLTYNVMIKLCARVDRKELIVFV 295

Query: 111 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           +E ++ + I+ CM+T +SLVAAYVG  DL+TAER+V
Sbjct: 296 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIV 331


>ref|XP_006407654.1| hypothetical protein EUTSA_v10020113mg [Eutrema salsugineum]
           gi|557108800|gb|ESQ49107.1| hypothetical protein
           EUTSA_v10020113mg [Eutrema salsugineum]
          Length = 777

 Score =  104 bits (260), Expect = 3e-20
 Identities = 50/96 (52%), Positives = 70/96 (72%)
 Frame = -3

Query: 291 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 112
           PDT AFNA+ N CA +GD EK + +  EM  +D + D  TYN++IKL AR+ R++LI  V
Sbjct: 233 PDTAAFNAVLNACANLGDAEKFSKLFDEMSEWDCESDVLTYNVMIKLCARVNRKELIVFV 292

Query: 111 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           +E ++ + I+ CM+T +SLVAAYVG  DL+TAER+V
Sbjct: 293 LERIVEKGIKVCMTTMHSLVAAYVGFGDLRTAERIV 328


>ref|NP_187576.1| RNA binding protein HCF152 [Arabidopsis thaliana]
           gi|75204290|sp|Q9SF38.1|PP222_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g09650, chloroplastic; AltName: Full=Protein HIGH
           CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor
           gi|6682243|gb|AAF23295.1|AC016661_20 hypothetical
           protein [Arabidopsis thaliana]
           gi|332641272|gb|AEE74793.1| RNA binding protein HCF152
           [Arabidopsis thaliana]
          Length = 778

 Score =  104 bits (260), Expect = 3e-20
 Identities = 50/96 (52%), Positives = 71/96 (73%)
 Frame = -3

Query: 291 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 112
           PDT AFNA+ N CA +GD +K   + +EM  +D +PD  TYN++IKL AR+ R++LI  V
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293

Query: 111 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           +E ++ + I+ CM+T +SLVAAYVG  DL+TAER+V
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIV 329


>dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]
          Length = 778

 Score =  104 bits (260), Expect = 3e-20
 Identities = 50/96 (52%), Positives = 71/96 (73%)
 Frame = -3

Query: 291 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 112
           PDT AFNA+ N CA +GD +K   + +EM  +D +PD  TYN++IKL AR+ R++LI  V
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293

Query: 111 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           +E ++ + I+ CM+T +SLVAAYVG  DL+TAER+V
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIV 329


>gb|EPS62297.1| hypothetical protein M569_12494, partial [Genlisea aurea]
          Length = 675

 Score =  103 bits (258), Expect = 6e-20
 Identities = 49/96 (51%), Positives = 69/96 (71%)
 Frame = -3

Query: 291 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 112
           PDT A+NA  N CA++GD  K   +  EM  FD +PDA TYN++IKL AR+ R+DL+  V
Sbjct: 154 PDTGAYNAALNACAVLGDSNKFLKLFDEMPEFDCEPDALTYNVMIKLCARVGRKDLLVFV 213

Query: 111 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           +E ++  + + C++T +SLVAAYVG  DL+TAE+LV
Sbjct: 214 LERIIQTQTDFCITTLHSLVAAYVGFNDLETAEKLV 249


>emb|CBI32614.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  102 bits (255), Expect = 1e-19
 Identities = 49/96 (51%), Positives = 70/96 (72%)
 Frame = -3

Query: 291 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 112
           PDT A+NA+ N CA +GD ++   V +EM     +PD  TYN++IKL AR++R+DL+  V
Sbjct: 238 PDTAAYNAVLNACANLGDTKRFLQVFEEMTQLGAEPDVLTYNVMIKLCARVDRKDLLVFV 297

Query: 111 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           +E +L + I+ CM+T +SLVAAYVG  DL+TAE+LV
Sbjct: 298 LERILDKGIQLCMTTLHSLVAAYVGFGDLETAEKLV 333


>ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Vitis vinifera]
          Length = 749

 Score =  102 bits (255), Expect = 1e-19
 Identities = 49/96 (51%), Positives = 70/96 (72%)
 Frame = -3

Query: 291 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 112
           PDT A+NA+ N CA +GD ++   V +EM     +PD  TYN++IKL AR++R+DL+  V
Sbjct: 230 PDTAAYNAVLNACANLGDTKRFLQVFEEMTQLGAEPDVLTYNVMIKLCARVDRKDLLVFV 289

Query: 111 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           +E +L + I+ CM+T +SLVAAYVG  DL+TAE+LV
Sbjct: 290 LERILDKGIQLCMTTLHSLVAAYVGFGDLETAEKLV 325


>ref|XP_006843220.1| hypothetical protein AMTR_s00080p00039920 [Amborella trichopoda]
           gi|548845504|gb|ERN04895.1| hypothetical protein
           AMTR_s00080p00039920 [Amborella trichopoda]
          Length = 718

 Score =  102 bits (253), Expect = 2e-19
 Identities = 51/97 (52%), Positives = 66/97 (68%)
 Frame = -3

Query: 294 WPDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPG 115
           +PD  AFNA+ N CA  GD      +   M  F++ PDA TYNI+IK  ARIER++L+  
Sbjct: 203 YPDVAAFNAVLNACANAGDAVNFVEIFSRMPKFELIPDALTYNIMIKFFARIERKELLVA 262

Query: 114 VVEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           V+E ML  K+ PC ++F+SLVAAYVGL DL+ AE LV
Sbjct: 263 VLEKMLAMKVAPCATSFHSLVAAYVGLGDLEMAEILV 299


>gb|EOY07747.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 758

 Score =  101 bits (251), Expect = 4e-19
 Identities = 48/96 (50%), Positives = 69/96 (71%)
 Frame = -3

Query: 291 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 112
           PDT A+NA+ N CA +GD  K   + +EM  +  +PD  TYN++IKL AR +R+DL+  V
Sbjct: 224 PDTAAYNAVLNACANLGDKSKFLKLFEEMSEWGCEPDVLTYNVMIKLLARADRKDLLVFV 283

Query: 111 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           +E ++ ++I  CM+T +SLVAAYVG  DL+TAER+V
Sbjct: 284 LERIVEKRIRLCMTTLHSLVAAYVGFDDLETAERIV 319


>ref|XP_006361774.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Solanum tuberosum]
          Length = 738

 Score =  100 bits (250), Expect = 5e-19
 Identities = 50/96 (52%), Positives = 67/96 (69%)
 Frame = -3

Query: 291 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 112
           PDT A+NA+ N CA +GD  +   +  EM  FD +PD  +YN++IKL AR +R+DL+  V
Sbjct: 221 PDTAAYNAVLNACANLGDKNRFLELFNEMSEFDCEPDVLSYNVMIKLCARGDRKDLLVFV 280

Query: 111 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           +E +L + I  CMSTF SLVAAYVG  DL TAE++V
Sbjct: 281 LERILEKGIPLCMSTFQSLVAAYVGFGDLVTAEKVV 316


>ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Cucumis sativus]
           gi|449483612|ref|XP_004156638.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Cucumis sativus]
          Length = 736

 Score =  100 bits (250), Expect = 5e-19
 Identities = 49/96 (51%), Positives = 68/96 (70%)
 Frame = -3

Query: 291 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 112
           PDT A+N + N CA +G  EK   + +EM+ F  +PD  TYN++IKL AR  R+DLI  V
Sbjct: 217 PDTAAYNGVLNACANMGAYEKFLQLFEEMEEFGAEPDVLTYNVMIKLCARANRKDLIVYV 276

Query: 111 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           +EA+L + I  CM+T +S+VAAYVG  DL+TAE++V
Sbjct: 277 LEAILAKDIPMCMTTLHSVVAAYVGFGDLETAEKVV 312


>gb|ABA95579.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 697

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 48/101 (47%), Positives = 66/101 (65%)
 Frame = -3

Query: 306 RNNVWPDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRD 127
           + N  PDT AFNA  + CA  GD  +   +  +M A++  PDA TYN+LIK+ AR  R+D
Sbjct: 196 KTNSLPDTAAFNAALSACANAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKD 255

Query: 126 LIPGVVEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           L+  V+  +L   + PC +TF+SLVAAYVG  D+ TAER+V
Sbjct: 256 LVARVLHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIV 296


>ref|NP_001065238.1| Os12g0102600 [Oryza sativa Japonica Group]
           gi|113648426|dbj|BAF28938.1| Os12g0102600, partial
           [Oryza sativa Japonica Group]
          Length = 712

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 48/101 (47%), Positives = 66/101 (65%)
 Frame = -3

Query: 306 RNNVWPDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRD 127
           + N  PDT AFNA  + CA  GD  +   +  +M A++  PDA TYN+LIK+ AR  R+D
Sbjct: 211 KTNSLPDTAAFNAALSACANAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKD 270

Query: 126 LIPGVVEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           L+  V+  +L   + PC +TF+SLVAAYVG  D+ TAER+V
Sbjct: 271 LVARVLHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIV 311


>ref|NP_001065521.1| Os11g0103000 [Oryza sativa Japonica Group]
           gi|77548314|gb|ABA91111.1| pentatricopeptide, putative
           [Oryza sativa Japonica Group]
           gi|113644225|dbj|BAF27366.1| Os11g0103000 [Oryza sativa
           Japonica Group]
          Length = 543

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 48/101 (47%), Positives = 66/101 (65%)
 Frame = -3

Query: 306 RNNVWPDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRD 127
           + N  PDT AFNA  + CA  GD  +   +  +M A++  PDA TYN+LIK+ AR  R+D
Sbjct: 42  KTNSLPDTAAFNAALSACADAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKD 101

Query: 126 LIPGVVEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           L+  V+  +L   + PC +TF+SLVAAYVG  D+ TAER+V
Sbjct: 102 LVARVLHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIV 142


>gb|EAY81947.1| hypothetical protein OsI_37125 [Oryza sativa Indica Group]
          Length = 697

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 48/101 (47%), Positives = 66/101 (65%)
 Frame = -3

Query: 306 RNNVWPDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRD 127
           + N  PDT AFNA  + CA  GD  +   +  +M A++  PDA TYN+LIK+ AR  R+D
Sbjct: 196 KTNSLPDTAAFNAALSACADAGDCIRFRHLFDQMPAWNAPPDALTYNVLIKMCARAGRKD 255

Query: 126 LIPGVVEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           L+  V+  +L   + PC +TF+SLVAAYVG  D+ TAER+V
Sbjct: 256 LVARVLHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIV 296


>dbj|BAJ98927.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 733

 Score = 97.1 bits (240), Expect = 7e-18
 Identities = 49/97 (50%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
 Frame = -3

Query: 291 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAF-DVQPDAFTYNILIKLSARIERRDLIPG 115
           PDT AFNA+ + CA  GD  +   +  EM+++    PDA TYN+ IK+ AR  RRDL+  
Sbjct: 206 PDTAAFNAVLSACADAGDCRRFRQLFDEMRSWPSAAPDALTYNVAIKMCARAGRRDLVAR 265

Query: 114 VVEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           V+E +L   I PC +TF+SLVAAYVG  D+ TAER+V
Sbjct: 266 VLERILSSGIAPCATTFHSLVAAYVGFGDIPTAERIV 302


>ref|XP_004306228.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 743

 Score = 96.7 bits (239), Expect = 9e-18
 Identities = 48/96 (50%), Positives = 65/96 (67%)
 Frame = -3

Query: 291 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 112
           PDT AFNA  N CA +GD ++   +  EM     +PD  TYN++IKL AR+ R+DL+  V
Sbjct: 227 PDTAAFNAALNACANLGDSDRFLKLFDEMPESGAEPDVLTYNVMIKLCARVGRKDLLVFV 286

Query: 111 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           +E +L + I  CM+T  SLVAAYVG  DL+TAE++V
Sbjct: 287 LERILDQGITVCMTTLNSLVAAYVGFGDLETAEKMV 322


>ref|XP_006664261.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Oryza brachyantha]
          Length = 553

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 46/101 (45%), Positives = 64/101 (63%)
 Frame = -3

Query: 306 RNNVWPDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRD 127
           R    PDT AFNA  + CA  GD  +   +  +M  +   PDA TYN++IK+ AR  R+D
Sbjct: 43  RTTSLPDTAAFNAALSACADAGDCTRFRHLFDQMPTWSAPPDALTYNVVIKMCARAGRKD 102

Query: 126 LIPGVVEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           L+  ++E +L   + PC +TF+SLVAAYVG  D+ TAER+V
Sbjct: 103 LVARLLERILSSGLAPCATTFHSLVAAYVGFGDIPTAERIV 143


>ref|XP_002322855.2| hypothetical protein POPTR_0016s08650g [Populus trichocarpa]
           gi|550321129|gb|EEF04616.2| hypothetical protein
           POPTR_0016s08650g [Populus trichocarpa]
          Length = 724

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 48/96 (50%), Positives = 66/96 (68%)
 Frame = -3

Query: 291 PDTQAFNAMFNICAMIGDMEKANGVMKEMKAFDVQPDAFTYNILIKLSARIERRDLIPGV 112
           PDT AFN + N CA +GD +    + +EM  F ++PD  TYNI+IKL AR  R+DL+  V
Sbjct: 198 PDTAAFNNVLNACANLGDGKMFLKLFEEMPDFGLEPDILTYNIMIKLCARCNRKDLLVFV 257

Query: 111 VEAMLMEKIEPCMSTFYSLVAAYVGLRDLKTAERLV 4
           +E ++ + I  CM+T +SLVAAYVG  DL+T ER+V
Sbjct: 258 LERVIEKGIPLCMTTLHSLVAAYVGFGDLETVERMV 293