BLASTX nr result

ID: Ephedra25_contig00027342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00027342
         (589 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76364.1| unknown [Picea sitchensis]                              61   3e-10
emb|CAE03379.1| OSJNBa0004N05.3 [Oryza sativa Japonica Group] gi...    55   7e-06
ref|NP_001053289.2| Os04g0510700 [Oryza sativa Japonica Group] g...    55   7e-06

>gb|ADE76364.1| unknown [Picea sitchensis]
          Length = 481

 Score = 60.8 bits (146), Expect(2) = 3e-10
 Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
 Frame = -2

Query: 588 KGKGEQRMLQHSFKGNGVMTVHAYLSSFPPKEVWHLIETQLQERFGKLLDN-PFTGKIKI 412
           + +G+    + SFKGNG+++V A+ +S P  E W  IE QLQ+++ +LL      G+++I
Sbjct: 50  RDEGQTVFRKQSFKGNGLVSVTAHPASIPTIEDWPGIEKQLQQKYKRLLGGLDACGRVRI 109

Query: 411 QDFEWRVLKFNHKSVEAYHKL 349
             F+WRVL+FN  + E+  K+
Sbjct: 110 LGFQWRVLRFNSMTRESVAKV 130



 Score = 30.0 bits (66), Expect(2) = 3e-10
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 361 ISQAVCVSIDSHPDQHFEYQVPHCLALP 278
           +++ + V ID+ P + F  Q PHCLA P
Sbjct: 127 VAKVMSVYIDTDPSRLFLMQQPHCLAFP 154


>emb|CAE03379.1| OSJNBa0004N05.3 [Oryza sativa Japonica Group]
           gi|116311071|emb|CAH68001.1| OSIGBa0157K09-H0214G12.12
           [Oryza sativa Indica Group] gi|218195196|gb|EEC77623.1|
           hypothetical protein OsI_16607 [Oryza sativa Indica
           Group] gi|222629192|gb|EEE61324.1| hypothetical protein
           OsJ_15431 [Oryza sativa Japonica Group]
          Length = 434

 Score = 54.7 bits (130), Expect(2) = 7e-06
 Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = -2

Query: 561 QHSFKGNGVMTVHAYLSSFPPKEVWHLIETQLQERFGKLLDNPF-TGKIKIQDFEWRVLK 385
           +HS  GNGV++V AY +S P  + W + E  LQER  ++  N F   + KI  ++WRV++
Sbjct: 64  RHSEHGNGVVSVSAYPASRPASDEWTVTERWLQERNARIYPNSFGANQFKILGYQWRVMR 123

Query: 384 FNHKSVEAYHKL 349
           FN  + ++  K+
Sbjct: 124 FNDHTRQSVAKV 135



 Score = 21.2 bits (43), Expect(2) = 7e-06
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 304 QVPHCLALP 278
           Q PHCLA+P
Sbjct: 151 QQPHCLAVP 159


>ref|NP_001053289.2| Os04g0510700 [Oryza sativa Japonica Group]
           gi|255675616|dbj|BAF15203.2| Os04g0510700 [Oryza sativa
           Japonica Group]
          Length = 215

 Score = 54.7 bits (130), Expect(2) = 7e-06
 Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = -2

Query: 561 QHSFKGNGVMTVHAYLSSFPPKEVWHLIETQLQERFGKLLDNPF-TGKIKIQDFEWRVLK 385
           +HS  GNGV++V AY +S P  + W + E  LQER  ++  N F   + KI  ++WRV++
Sbjct: 64  RHSEHGNGVVSVSAYPASRPASDEWTVTERWLQERNARIYPNSFGANQFKILGYQWRVMR 123

Query: 384 FNHKSVEAYHKL 349
           FN  + ++  K+
Sbjct: 124 FNDHTRQSVAKV 135



 Score = 21.2 bits (43), Expect(2) = 7e-06
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 304 QVPHCLALP 278
           Q PHCLA+P
Sbjct: 151 QQPHCLAVP 159


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