BLASTX nr result
ID: Ephedra25_contig00027342
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra25_contig00027342 (589 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADE76364.1| unknown [Picea sitchensis] 61 3e-10 emb|CAE03379.1| OSJNBa0004N05.3 [Oryza sativa Japonica Group] gi... 55 7e-06 ref|NP_001053289.2| Os04g0510700 [Oryza sativa Japonica Group] g... 55 7e-06 >gb|ADE76364.1| unknown [Picea sitchensis] Length = 481 Score = 60.8 bits (146), Expect(2) = 3e-10 Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 1/81 (1%) Frame = -2 Query: 588 KGKGEQRMLQHSFKGNGVMTVHAYLSSFPPKEVWHLIETQLQERFGKLLDN-PFTGKIKI 412 + +G+ + SFKGNG+++V A+ +S P E W IE QLQ+++ +LL G+++I Sbjct: 50 RDEGQTVFRKQSFKGNGLVSVTAHPASIPTIEDWPGIEKQLQQKYKRLLGGLDACGRVRI 109 Query: 411 QDFEWRVLKFNHKSVEAYHKL 349 F+WRVL+FN + E+ K+ Sbjct: 110 LGFQWRVLRFNSMTRESVAKV 130 Score = 30.0 bits (66), Expect(2) = 3e-10 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -1 Query: 361 ISQAVCVSIDSHPDQHFEYQVPHCLALP 278 +++ + V ID+ P + F Q PHCLA P Sbjct: 127 VAKVMSVYIDTDPSRLFLMQQPHCLAFP 154 >emb|CAE03379.1| OSJNBa0004N05.3 [Oryza sativa Japonica Group] gi|116311071|emb|CAH68001.1| OSIGBa0157K09-H0214G12.12 [Oryza sativa Indica Group] gi|218195196|gb|EEC77623.1| hypothetical protein OsI_16607 [Oryza sativa Indica Group] gi|222629192|gb|EEE61324.1| hypothetical protein OsJ_15431 [Oryza sativa Japonica Group] Length = 434 Score = 54.7 bits (130), Expect(2) = 7e-06 Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Frame = -2 Query: 561 QHSFKGNGVMTVHAYLSSFPPKEVWHLIETQLQERFGKLLDNPF-TGKIKIQDFEWRVLK 385 +HS GNGV++V AY +S P + W + E LQER ++ N F + KI ++WRV++ Sbjct: 64 RHSEHGNGVVSVSAYPASRPASDEWTVTERWLQERNARIYPNSFGANQFKILGYQWRVMR 123 Query: 384 FNHKSVEAYHKL 349 FN + ++ K+ Sbjct: 124 FNDHTRQSVAKV 135 Score = 21.2 bits (43), Expect(2) = 7e-06 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = -1 Query: 304 QVPHCLALP 278 Q PHCLA+P Sbjct: 151 QQPHCLAVP 159 >ref|NP_001053289.2| Os04g0510700 [Oryza sativa Japonica Group] gi|255675616|dbj|BAF15203.2| Os04g0510700 [Oryza sativa Japonica Group] Length = 215 Score = 54.7 bits (130), Expect(2) = 7e-06 Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Frame = -2 Query: 561 QHSFKGNGVMTVHAYLSSFPPKEVWHLIETQLQERFGKLLDNPF-TGKIKIQDFEWRVLK 385 +HS GNGV++V AY +S P + W + E LQER ++ N F + KI ++WRV++ Sbjct: 64 RHSEHGNGVVSVSAYPASRPASDEWTVTERWLQERNARIYPNSFGANQFKILGYQWRVMR 123 Query: 384 FNHKSVEAYHKL 349 FN + ++ K+ Sbjct: 124 FNDHTRQSVAKV 135 Score = 21.2 bits (43), Expect(2) = 7e-06 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = -1 Query: 304 QVPHCLALP 278 Q PHCLA+P Sbjct: 151 QQPHCLAVP 159