BLASTX nr result
ID: Ephedra25_contig00027337
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra25_contig00027337 (616 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABR16531.1| unknown [Picea sitchensis] 72 9e-11 gb|ABK21419.1| unknown [Picea sitchensis] 60 4e-07 gb|ABK22262.1| unknown [Picea sitchensis] 60 5e-07 gb|ABK21767.1| unknown [Picea sitchensis] 58 2e-06 >gb|ABR16531.1| unknown [Picea sitchensis] Length = 183 Score = 72.4 bits (176), Expect = 9e-11 Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 16/136 (11%) Frame = -1 Query: 514 YVLCDSEGLYVDEKISCVLREGDEVKAGHLYFVLPKKKLEFVLSESGMXXXXXXXXXXXX 335 + +C+S+GLYV + IS +L + D ++ G LYF+LP++KL+FVL++S M Sbjct: 47 HFICNSDGLYVGQNISQILGDDDRLQIGQLYFLLPQRKLQFVLTDSDMASLLSKISTTLS 106 Query: 334 XXSK----------------NMQPIFFVHHKDAEEEEEKGQQGLYCCSISQMQTVNAKRR 203 K +QP+F +H + E EE C S QM ++ R Sbjct: 107 AQKKKRQSRRLSCGFGKAQVQVQPLFDIHSQHDECGEEYHYSSACCMSRRQMIPISTPRS 166 Query: 202 VSKAPWQCHLDTILES 155 + WQ L+TI E+ Sbjct: 167 RGRTQWQSKLETIAET 182 >gb|ABK21419.1| unknown [Picea sitchensis] Length = 187 Score = 60.5 bits (145), Expect = 4e-07 Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 24/144 (16%) Frame = -1 Query: 514 YVLCDSEGLYVDEKISCVLREGDEVKAGHLYFVLPKKKLEFVLSESGMXXXXXXXXXXXX 335 + +C+S+GLY+ IS VLR+ D+++ G LY +LP++KL+FVL++S M Sbjct: 45 HFICNSDGLYIGRNISQVLRDDDQLRIGQLYCLLPRRKLQFVLTDSDMASLLCKINTALL 104 Query: 334 XXSK-----------------NMQPIFFVHHKDAEEEEEKGQQGLY-----CCSISQMQT 221 + +QP+F +H + + +E G++ Y C +S++ Sbjct: 105 ALQEKKRQSRRLSWGFCKAQVQVQPLFDIHSQ--HDHDESGEEYYYESSSSLCCMSRLPN 162 Query: 220 V--NAKRRVSKAPWQCHLDTILES 155 + + R + WQ L+ I ES Sbjct: 163 IPNSIPTRRGRNHWQSKLEPIEES 186 >gb|ABK22262.1| unknown [Picea sitchensis] Length = 187 Score = 60.1 bits (144), Expect = 5e-07 Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 24/144 (16%) Frame = -1 Query: 514 YVLCDSEGLYVDEKISCVLREGDEVKAGHLYFVLPKKKLEFVLSESGMXXXXXXXXXXXX 335 + +C+S+GLY+ IS VLR+ D+++ G LY +LP++KL+FVL++S M Sbjct: 45 HFICNSDGLYIGRNISQVLRDDDQLQIGQLYCLLPRRKLQFVLTDSDMASLLCKIITALL 104 Query: 334 XXSK-----------------NMQPIFFVHHKDAEEEEEKGQQGLY-----CCSISQMQT 221 + +QP+F +H + + +E G++ Y C +S++ Sbjct: 105 ALQEKKRQSRRLSWGFCKAQVQVQPLFDIHSQ--HDHDESGEEYYYESSSSLCCMSRLPN 162 Query: 220 V--NAKRRVSKAPWQCHLDTILES 155 + + R + WQ L+ I ES Sbjct: 163 IPNSIPTRRGRNHWQSKLEPIEES 186 >gb|ABK21767.1| unknown [Picea sitchensis] Length = 180 Score = 57.8 bits (138), Expect = 2e-06 Identities = 29/77 (37%), Positives = 49/77 (63%) Frame = -1 Query: 601 VITHEGSAIEEKHGAKCCDVLTHCCSSSKYVLCDSEGLYVDEKISCVLREGDEVKAGHLY 422 +I +GS +E + ++L + +C+S+GLY IS VLR+ D+++ G LY Sbjct: 20 LILMDGSILEFSEVVRSQEILQEYPG---HFICNSDGLYAGRNISQVLRDDDQLQIGQLY 76 Query: 421 FVLPKKKLEFVLSESGM 371 F+LP++KL+FVL++S M Sbjct: 77 FLLPQRKLQFVLTDSDM 93