BLASTX nr result

ID: Ephedra25_contig00027337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00027337
         (616 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16531.1| unknown [Picea sitchensis]                              72   9e-11
gb|ABK21419.1| unknown [Picea sitchensis]                              60   4e-07
gb|ABK22262.1| unknown [Picea sitchensis]                              60   5e-07
gb|ABK21767.1| unknown [Picea sitchensis]                              58   2e-06

>gb|ABR16531.1| unknown [Picea sitchensis]
          Length = 183

 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
 Frame = -1

Query: 514 YVLCDSEGLYVDEKISCVLREGDEVKAGHLYFVLPKKKLEFVLSESGMXXXXXXXXXXXX 335
           + +C+S+GLYV + IS +L + D ++ G LYF+LP++KL+FVL++S M            
Sbjct: 47  HFICNSDGLYVGQNISQILGDDDRLQIGQLYFLLPQRKLQFVLTDSDMASLLSKISTTLS 106

Query: 334 XXSK----------------NMQPIFFVHHKDAEEEEEKGQQGLYCCSISQMQTVNAKRR 203
              K                 +QP+F +H +  E  EE       C S  QM  ++  R 
Sbjct: 107 AQKKKRQSRRLSCGFGKAQVQVQPLFDIHSQHDECGEEYHYSSACCMSRRQMIPISTPRS 166

Query: 202 VSKAPWQCHLDTILES 155
             +  WQ  L+TI E+
Sbjct: 167 RGRTQWQSKLETIAET 182


>gb|ABK21419.1| unknown [Picea sitchensis]
          Length = 187

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 24/144 (16%)
 Frame = -1

Query: 514 YVLCDSEGLYVDEKISCVLREGDEVKAGHLYFVLPKKKLEFVLSESGMXXXXXXXXXXXX 335
           + +C+S+GLY+   IS VLR+ D+++ G LY +LP++KL+FVL++S M            
Sbjct: 45  HFICNSDGLYIGRNISQVLRDDDQLRIGQLYCLLPRRKLQFVLTDSDMASLLCKINTALL 104

Query: 334 XXSK-----------------NMQPIFFVHHKDAEEEEEKGQQGLY-----CCSISQMQT 221
              +                  +QP+F +H +   + +E G++  Y      C +S++  
Sbjct: 105 ALQEKKRQSRRLSWGFCKAQVQVQPLFDIHSQ--HDHDESGEEYYYESSSSLCCMSRLPN 162

Query: 220 V--NAKRRVSKAPWQCHLDTILES 155
           +  +   R  +  WQ  L+ I ES
Sbjct: 163 IPNSIPTRRGRNHWQSKLEPIEES 186


>gb|ABK22262.1| unknown [Picea sitchensis]
          Length = 187

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 24/144 (16%)
 Frame = -1

Query: 514 YVLCDSEGLYVDEKISCVLREGDEVKAGHLYFVLPKKKLEFVLSESGMXXXXXXXXXXXX 335
           + +C+S+GLY+   IS VLR+ D+++ G LY +LP++KL+FVL++S M            
Sbjct: 45  HFICNSDGLYIGRNISQVLRDDDQLQIGQLYCLLPRRKLQFVLTDSDMASLLCKIITALL 104

Query: 334 XXSK-----------------NMQPIFFVHHKDAEEEEEKGQQGLY-----CCSISQMQT 221
              +                  +QP+F +H +   + +E G++  Y      C +S++  
Sbjct: 105 ALQEKKRQSRRLSWGFCKAQVQVQPLFDIHSQ--HDHDESGEEYYYESSSSLCCMSRLPN 162

Query: 220 V--NAKRRVSKAPWQCHLDTILES 155
           +  +   R  +  WQ  L+ I ES
Sbjct: 163 IPNSIPTRRGRNHWQSKLEPIEES 186


>gb|ABK21767.1| unknown [Picea sitchensis]
          Length = 180

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/77 (37%), Positives = 49/77 (63%)
 Frame = -1

Query: 601 VITHEGSAIEEKHGAKCCDVLTHCCSSSKYVLCDSEGLYVDEKISCVLREGDEVKAGHLY 422
           +I  +GS +E     +  ++L        + +C+S+GLY    IS VLR+ D+++ G LY
Sbjct: 20  LILMDGSILEFSEVVRSQEILQEYPG---HFICNSDGLYAGRNISQVLRDDDQLQIGQLY 76

Query: 421 FVLPKKKLEFVLSESGM 371
           F+LP++KL+FVL++S M
Sbjct: 77  FLLPQRKLQFVLTDSDM 93


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