BLASTX nr result

ID: Ephedra25_contig00027260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00027260
         (523 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624846.1| Membrane protein, putative [Medicago truncat...    57   3e-06
gb|ABD28651.2| Cystinosin/ERS1p repeat [Medicago truncatula]           57   3e-06
ref|XP_004300590.1| PREDICTED: uncharacterized protein LOC101293...    56   6e-06
ref|XP_002274448.2| PREDICTED: uncharacterized membrane protein ...    55   7e-06

>ref|XP_003624846.1| Membrane protein, putative [Medicago truncatula]
           gi|355499861|gb|AES81064.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 398

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/113 (33%), Positives = 51/113 (45%)
 Frame = -3

Query: 425 TTVGTWLGWAMALIYIGGSLPQIY*I*SMEH*RD*TNSCLYFSLFGNVAYVAR*LKTFFT 246
           +++GT+ GWAMA+IY+GG +PQI+      H          F+L GN  YVA        
Sbjct: 274 SSIGTFFGWAMAVIYLGGRMPQIFLNIRRGHAEGLNPLMFLFALIGNATYVA-------- 325

Query: 245 ASS*WPQRLTDSNLKRNLLVKCSIVVRRLE*NFIYPYMPWLVDAAVYFLLAIF 87
                                 SI+VR L+ + I P +PWLVDA    LL  F
Sbjct: 326 ----------------------SILVRSLDWSTIGPNLPWLVDAGGCVLLDFF 356


>gb|ABD28651.2| Cystinosin/ERS1p repeat [Medicago truncatula]
          Length = 331

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/113 (33%), Positives = 51/113 (45%)
 Frame = -3

Query: 425 TTVGTWLGWAMALIYIGGSLPQIY*I*SMEH*RD*TNSCLYFSLFGNVAYVAR*LKTFFT 246
           +++GT+ GWAMA+IY+GG +PQI+      H          F+L GN  YVA        
Sbjct: 207 SSIGTFFGWAMAVIYLGGRMPQIFLNIRRGHAEGLNPLMFLFALIGNATYVA-------- 258

Query: 245 ASS*WPQRLTDSNLKRNLLVKCSIVVRRLE*NFIYPYMPWLVDAAVYFLLAIF 87
                                 SI+VR L+ + I P +PWLVDA    LL  F
Sbjct: 259 ----------------------SILVRSLDWSTIGPNLPWLVDAGGCVLLDFF 289


>ref|XP_004300590.1| PREDICTED: uncharacterized protein LOC101293205 [Fragaria vesca
           subsp. vesca]
          Length = 388

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 42/124 (33%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
 Frame = -3

Query: 446 LRETVLETTV-GTWLGWAMALIYIGGSLPQIY*I*SMEH*RD*TNSCLYFSLFGNVAYVA 270
           L+E  +E +V G WLGW MA IY+GG LPQI+                 F+L  NV YVA
Sbjct: 263 LQEHSVEHSVFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVA 322

Query: 269 R*LKTFFTASS*WPQRLTDSNLKRNLLVKCSIVVRRLE*NFIYPYMPWLVDAAVYFLLAI 90
                                         SI+VR +E + I   MPWL+DAAV   L +
Sbjct: 323 ------------------------------SILVRTIEWDSIKANMPWLLDAAVCVALDL 352

Query: 89  FVLI 78
           F+++
Sbjct: 353 FIIL 356


>ref|XP_002274448.2| PREDICTED: uncharacterized membrane protein YOL092W-like [Vitis
           vinifera] gi|297735218|emb|CBI17580.3| unnamed protein
           product [Vitis vinifera]
          Length = 381

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 41/124 (33%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
 Frame = -3

Query: 446 LRETVLETTV-GTWLGWAMALIYIGGSLPQIY*I*SMEH*RD*TNSCLYFSLFGNVAYVA 270
           L E+ +E +  G WLGW MA IY+GG LPQI+                 F+L  NV YVA
Sbjct: 257 LHESGMENSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALIANVTYVA 316

Query: 269 R*LKTFFTASS*WPQRLTDSNLKRNLLVKCSIVVRRLE*NFIYPYMPWLVDAAVYFLLAI 90
                                         SI+VR  E   I   MPWL+DAAV  +L +
Sbjct: 317 ------------------------------SILVRTTEWEKIKANMPWLLDAAVCVMLDL 346

Query: 89  FVLI 78
           F+++
Sbjct: 347 FIIL 350


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