BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00027195
         (472 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24412.1| unknown [Picea sitchensis]                             101   9e-20
ref|XP_002514498.1| skip-2, putative [Ricinus communis] gi|22354...    63   5e-08
ref|XP_002309038.2| hypothetical protein POPTR_0006s08160g [Popu...    62   6e-08
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...    57   2e-06
ref|XP_006339852.1| PREDICTED: F-box protein SKIP2-like [Solanum...    57   3e-06
ref|XP_004231878.1| PREDICTED: F-box protein At1g47056-like [Sol...    57   3e-06
ref|XP_006858612.1| hypothetical protein AMTR_s00198p00016850 [A...    55   7e-06
ref|NP_569047.1| F-box protein SKIP2 [Arabidopsis thaliana] gi|7...    55   1e-05

>gb|ABK24412.1| unknown [Picea sitchensis]
          Length = 498

 Score =  101 bits (252), Expect = 9e-20
 Identities = 55/95 (57%), Positives = 70/95 (73%)
 Frame = -3

Query: 470 DGLERLALGCPNLIKLKVKRCKHVTSRSVFRLQRCRSSLLVSLDHGGAHASTEDENISSL 291
           DGL  +A GCP+LIKLKVKRCK VTS+SV ++Q  R SL+V++D GG+  + ED+   SL
Sbjct: 394 DGLVTIAGGCPSLIKLKVKRCKGVTSKSVCQVQTKRGSLIVAVD-GGSQTAGEDDQGRSL 452

Query: 290 VSDENRVIREPTHVLCGSRTPLIKSRWGVVASNFL 186
              ++RVIRE THVLCGSR  LIK++ G  ASN L
Sbjct: 453 QLGDDRVIRESTHVLCGSRGHLIKTKLGTAASNLL 487


>ref|XP_002514498.1| skip-2, putative [Ricinus communis] gi|223546397|gb|EEF47898.1|
           skip-2, putative [Ricinus communis]
          Length = 511

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 15/100 (15%)
 Frame = -3

Query: 467 GLERLALGCPNLIKLKVKRCKHVTSRSVFRLQRCRSSLLVSLDHG-----GAHASTEDEN 303
           G+E +  GCPNL+KLKVKRC+ ++  SV +L+  R+S++VS+D G     G   +   E 
Sbjct: 399 GIEAIGGGCPNLVKLKVKRCRGISEASVRKLRMQRTSVVVSVDTGSMVFSGQRMTITQEE 458

Query: 302 ISSLVSDENRVIREP---------THVLCGSRTPL-IKSR 213
             +    +NR IR P          HV+C SR+ L ++SR
Sbjct: 459 EEAEQQQQNRSIRTPNTAAATTAAAHVVCSSRSALFLRSR 498


>ref|XP_002309038.2| hypothetical protein POPTR_0006s08160g [Populus trichocarpa]
           gi|550335763|gb|EEE92561.2| hypothetical protein
           POPTR_0006s08160g [Populus trichocarpa]
          Length = 572

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 41/102 (40%), Positives = 51/102 (50%), Gaps = 20/102 (19%)
 Frame = -3

Query: 467 GLERLALGCPNLIKLKVKRCKHVTSRSVFRLQRCRSSLLVSLDHGG-----------AHA 321
           G+E +  GCPNL+KLKVKRCK VT   V RL+  RSSL+VSLD G            A A
Sbjct: 448 GIEAVGRGCPNLVKLKVKRCKGVTQAMVSRLRFQRSSLVVSLDAGSMLFDSGGISLLASA 507

Query: 320 STEDENISSLVSDENRVIRE---------PTHVLCGSRTPLI 222
             E+E  ++         R           THV+C SR  L+
Sbjct: 508 VNEEEQGTATAMTNTNSTRSAAAAATTVAATHVICSSRGALL 549


>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
           gi|449515093|ref|XP_004164584.1| PREDICTED: F-box
           protein At1g47056-like [Cucumis sativus]
          Length = 535

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
 Frame = -3

Query: 467 GLERLALGCPNLIKLKVKRCKHVTSRSVFRLQRCRSSLLVSLDHGGAH---ASTEDENIS 297
           G+E LA GCPNL+K+KVK+C+ VT      L+  R SL V+LD G      AS  +  I 
Sbjct: 416 GMEALAEGCPNLVKVKVKKCRGVTPEGADSLRLSRGSLAVNLDSGEPEHPDASASEGGIQ 475

Query: 296 SLVSD----ENRVIREPTHVLCGSRTPLIKSRWGVVASNFL 186
             V D     N+V+          R+  +KSR G++A   L
Sbjct: 476 DNVVDFHPIPNQVVPPTIASSSAGRSSSLKSRLGLLAGRGL 516


>ref|XP_006339852.1| PREDICTED: F-box protein SKIP2-like [Solanum tuberosum]
          Length = 550

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = -3

Query: 467 GLERLALGCPNLIKLKVKRCKHVTSRSVFRLQRCRSSLLVSLDHGGAHASTEDENIS 297
           G+E  A GCPNL+K+KVK+CKHVT     RL+  R SL V+LD G       D + S
Sbjct: 428 GIESFAWGCPNLVKIKVKKCKHVTGDVADRLRARRQSLAVNLDGGEIDIEPVDSSAS 484


>ref|XP_004231878.1| PREDICTED: F-box protein At1g47056-like [Solanum lycopersicum]
          Length = 550

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/57 (47%), Positives = 35/57 (61%)
 Frame = -3

Query: 467 GLERLALGCPNLIKLKVKRCKHVTSRSVFRLQRCRSSLLVSLDHGGAHASTEDENIS 297
           G+E  A GCPNL+K+KVK+CKHVT     R++  R SL V+LD G       D + S
Sbjct: 428 GIESFAWGCPNLVKIKVKKCKHVTGDVADRIRAMRQSLAVNLDGGEIDIEPVDSSAS 484


>ref|XP_006858612.1| hypothetical protein AMTR_s00198p00016850 [Amborella trichopoda]
           gi|548862722|gb|ERN20079.1| hypothetical protein
           AMTR_s00198p00016850 [Amborella trichopoda]
          Length = 517

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
 Frame = -3

Query: 467 GLERLALGCPNLIKLKVKRCKHVTSRSVFRLQRCRSSLLVSLD-HGGAHASTED 309
           G+E LA GCPNL+K+KVK+C+ VTS     L+  R SL V+LD H    AST D
Sbjct: 401 GMEALAAGCPNLVKVKVKKCRGVTSEGAEWLRASRGSLAVNLDTHDPPDASTSD 454


>ref|NP_569047.1| F-box protein SKIP2 [Arabidopsis thaliana]
           gi|75272932|sp|Q9FE83.1|SKIP2_ARATH RecName: Full=F-box
           protein SKIP2; AltName: Full=SKP1-interacting partner 2
           gi|10177612|dbj|BAB10959.1| unnamed protein product
           [Arabidopsis thaliana] gi|10716949|gb|AAG21977.1| SKP1
           interacting partner 2 [Arabidopsis thaliana]
           gi|27311735|gb|AAO00833.1| SKP1 interacting partner 2
           (SKIP2) [Arabidopsis thaliana]
           gi|31711938|gb|AAP68325.1| At5g67250 [Arabidopsis
           thaliana] gi|332010937|gb|AED98320.1| F-box protein
           SKIP2 [Arabidopsis thaliana]
          Length = 527

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
 Frame = -3

Query: 467 GLERLALGCPNLIKLKVKRCKHVTSRSVFRLQRCRSSLLVSLDHGGAHASTEDENISSLV 288
           G+E LA+GCPNL+KLKVK+CK VT      L+  R +L+VS+D     A    +     V
Sbjct: 408 GIEALAVGCPNLVKLKVKKCKVVTGEIGDWLREQRRTLVVSMDGDETEAVVVVDGEVETV 467

Query: 287 SDENRVIREPTHVL--------CGSRTPLIKSRWGVVASNFL 186
            +E RV +    V          GSR  +I+S+ G +A   L
Sbjct: 468 VEEPRVAQAGGIVAEIGSSNGGGGSRLAMIRSKLGFLAGRNL 509