BLASTX nr result

ID: Ephedra25_contig00027113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00027113
         (748 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001776898.1| SNF2 family DNA-dependent ATPase [Physcomitr...    77   6e-12
ref|XP_002966200.1| hypothetical protein SELMODRAFT_407530 [Sela...    57   5e-06

>ref|XP_001776898.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens]
           gi|162671754|gb|EDQ58301.1| SNF2 family DNA-dependent
           ATPase [Physcomitrella patens]
          Length = 1122

 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 32/83 (38%), Positives = 53/83 (63%)
 Frame = +1

Query: 391 YFSVLYCKRKRGGKAKGPWMDGVATITGRRFALEDIDGKLVKKGDSKGLSDCAEGSSFES 570
           ++ V+YC RK+  K KGPW DG+    GR   L+D+D K+V K + +GL D  EG++ E 
Sbjct: 328 HYLVMYCPRKKNAKRKGPWSDGIIVCQGRSCTLQDMDSKVVSKSNFQGLKDMPEGATLEV 387

Query: 571 DMYSIELCNESSADEYKSGSLFI 639
             + +E+  ++S +E  SG+L++
Sbjct: 388 GKFEVEVMRKASNEEVLSGTLYM 410


>ref|XP_002966200.1| hypothetical protein SELMODRAFT_407530 [Selaginella moellendorffii]
           gi|300165620|gb|EFJ32227.1| hypothetical protein
           SELMODRAFT_407530 [Selaginella moellendorffii]
          Length = 814

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 31/83 (37%), Positives = 44/83 (53%)
 Frame = +1

Query: 388 RYFSVLYCKRKRGGKAKGPWMDGVATITGRRFALEDIDGKLVKKGDSKGLSDCAEGSSFE 567
           RYF V+Y  +K+  +  GP  DGV  + G  + L D DGK + K    G  +  E SS E
Sbjct: 87  RYFEVMYSVKKKNSRKPGPRSDGVLAVQGSSYNLLDKDGKSISKRKISG-KEIKENSSLE 145

Query: 568 SDMYSIELCNESSADEYKSGSLF 636
              + IE+ +E   +EY SG +F
Sbjct: 146 VFNFVIEVLDEIPEEEYLSGKIF 168


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