BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00027112
         (494 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527150.1| pentatricopeptide repeat-containing protein,...    62   6e-08
ref|XP_006486600.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06
ref|XP_006422433.1| hypothetical protein CICLE_v10027787mg [Citr...    55   7e-06
gb|EOX97442.1| Pentatricopeptide repeat (PPR) superfamily protei...    55   7e-06

>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 874

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
 Frame = -1

Query: 413 VSEVLQRNRDHALLAWNFYNWVNHLEITGKDLVV-FKDVSSILCNAKLIEELKHLHQSLA 237
           +++ L  N  +  LAW+ +  +  L I+          +S IL  +K+  EL  LHQ L 
Sbjct: 7   LTKALLNNAHNPKLAWHLFKRILSLPISSNHRSQSIPIISRILIRSKMFNELDDLHQLLL 66

Query: 236 KSENRESSSAPKLAILAESLANAGFVHEAFAAYSDLKQFDAKLTPSFY--NALMEASIGK 63
            S + ESS +  L  L   LA +GF ++A + +  L+    +  PS Y  N L+++ I +
Sbjct: 67  NSPSLESSDS-SLENLVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRE 125

Query: 62  GKMELIPILYKEMIRIIVKP 3
            ++EL+  LYK+M+   V P
Sbjct: 126 NRVELVSWLYKDMVLARVSP 145


>ref|XP_006486600.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Citrus sinensis]
           gi|568866524|ref|XP_006486605.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g17140-like [Citrus sinensis]
          Length = 889

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
 Frame = -1

Query: 425 TPAIVSEVLQRNRDHALLAWNFYNWVN-HLEITGKDLVVFKDVSSILCNAKLIEELKHLH 249
           T   +++ L +N ++  LAW  +  V  +   T   L     ++ IL  +K++EE+  LH
Sbjct: 7   TQVTITKALLKNANNPKLAWQIFRRVILNSPTTNPPLDSVPTIARILIRSKMLEEIHTLH 66

Query: 248 QSLAKSENRESSSAPKLAILAESLANAGFVHEAFAAYSDLKQFDAKLTPSFY--NALMEA 75
             L   + R +S +  L  L + LA +G + EAF+ +  ++       P  Y  N L E 
Sbjct: 67  SLLLSLKPRGNSHS-SLTSLVKILAKSGLLDEAFSQFKSIRVHFHGDPPCIYLYNVLFEC 125

Query: 74  SIGKGKMELIPILYKEMIRIIVKP 3
            + K  M+ +  LYK+M+   V P
Sbjct: 126 CVRKQHMDYLMWLYKDMVVAKVSP 149


>ref|XP_006422433.1| hypothetical protein CICLE_v10027787mg [Citrus clementina]
           gi|557524367|gb|ESR35673.1| hypothetical protein
           CICLE_v10027787mg [Citrus clementina]
          Length = 889

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
 Frame = -1

Query: 425 TPAIVSEVLQRNRDHALLAWNFYNWVN-HLEITGKDLVVFKDVSSILCNAKLIEELKHLH 249
           T   +++ L +N ++  LAW  +  V  +   T   L     ++ IL  +K++EE+  LH
Sbjct: 7   TQVTITKALLKNANNPKLAWQIFRRVILNSPTTNPPLDSVPTIARILIRSKMLEEIHTLH 66

Query: 248 QSLAKSENRESSSAPKLAILAESLANAGFVHEAFAAYSDLKQFDAKLTPSFY--NALMEA 75
             L   + R +S +  L  L + LA +G + EAF+ +  ++       P  Y  N L E 
Sbjct: 67  SLLLSLKPRGNSHS-SLTSLVKILAKSGLLDEAFSQFKSIRVHFHGDPPCIYLYNVLFEC 125

Query: 74  SIGKGKMELIPILYKEMIRIIVKP 3
            + K  M+ +  LYK+M+   V P
Sbjct: 126 CVRKQHMDYLMWLYKDMVVAKVSP 149


>gb|EOX97442.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
           [Theobroma cacao]
          Length = 872

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
 Frame = -1

Query: 401 LQRNRDHALLAWNFYNWVNHLEITGKDLVVFKDVSSILCNAKLIEELKHLHQSLAKSENR 222
           L +N  +  LAW  +  +  L      L     +S IL  + +++E+ HLH  L  S+  
Sbjct: 10  LLKNTKNPKLAWQLFKRIQSLPTDSSFLPSVPTISRILIRSNMLQEIDHLHHLLLSSQ-P 68

Query: 221 ESSSAPKLAILAESLANAGFVHEAFAAYSDLKQFDAKLTPS--FYNALMEASIGKGKMEL 48
           + +    L  L + LA +GF   AF+ +  ++    +  PS   YN L E  I +   + 
Sbjct: 69  QLNPLSSLISLVKLLARSGFFDRAFSQFQSIRTKFPQNPPSICLYNVLFECCIKERCSDY 128

Query: 47  IPILYKEMIRIIVKP 3
           +  LYK+M+   V P
Sbjct: 129 VLWLYKDMVGAGVSP 143