BLASTX nr result

ID: Ephedra25_contig00026993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00026993
         (448 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17030.1| unknown [Picea sitchensis]                              62   1e-07
gb|AFG57781.1| hypothetical protein 0_18916_02, partial [Pinus t...    59   9e-07

>gb|ABR17030.1| unknown [Picea sitchensis]
          Length = 316

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = +3

Query: 303 QVNVEENFSPACAKGFSLGFLTLFDGIKKLEELNGNEEHVRIQTKNVV 446
           QV+  +NFS A AKGF+ GFL+LF G+K+LEELN NEEH +IQ + V+
Sbjct: 249 QVSFGQNFSLAWAKGFTWGFLSLFPGVKELEELNTNEEHAKIQNEKVL 296



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/87 (35%), Positives = 45/87 (51%)
 Frame = +1

Query: 46  LSKETTIGMTTSTTHQPSSAKMVEHIILYNVKDGTTPDKTNEMVSVLQAFHMLPMVSHLT 225
           +S+ T+     S       +K+VEH++ +N+K+ T P+K N M+S LQ    L  V  LT
Sbjct: 83  ISRPTSFSAKFSAIMDSLPSKVVEHVVFFNIKESTPPEKVNAMISALQGLKSLDQVLELT 142

Query: 226 LALLKDYSYSTSTFNQNMKFTHALHSR 306
                 +S  T       K+THALHSR
Sbjct: 143 AGPALRFSSGT------YKYTHALHSR 163


>gb|AFG57781.1| hypothetical protein 0_18916_02, partial [Pinus taeda]
           gi|383151511|gb|AFG57782.1| hypothetical protein
           0_18916_02, partial [Pinus taeda]
          Length = 152

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/85 (37%), Positives = 43/85 (50%)
 Frame = +1

Query: 52  KETTIGMTTSTTHQPSSAKMVEHIILYNVKDGTTPDKTNEMVSVLQAFHMLPMVSHLTLA 231
           K T+     S       +K+VEH++ + VKDGT P+K N M+S LQ    L  V  LT  
Sbjct: 2   KSTSFSANFSANMASLPSKVVEHVVFFKVKDGTPPEKANAMISALQGLKSLDQVLDLTAG 61

Query: 232 LLKDYSYSTSTFNQNMKFTHALHSR 306
               ++  T       K+THALHSR
Sbjct: 62  PALRFNSGT------YKYTHALHSR 80


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