BLASTX nr result

ID: Ephedra25_contig00026679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00026679
         (909 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17628.1| unknown [Picea sitchensis]                              72   4e-10

>gb|ABR17628.1| unknown [Picea sitchensis]
          Length = 382

 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 73/282 (25%), Positives = 117/282 (41%), Gaps = 15/282 (5%)
 Frame = -2

Query: 899 LSSSEGLPSEMCVLMVCNAILCFLIGTCEWAQKNHTNAILLLLSMFWIWGNLKLTFVTYL 720
           L +S  L   M  +++C+A+L   +G  +W Q N  N +L   S+ WIWG+LKL  V  L
Sbjct: 83  LQTSGNLLWHMFAVVLCSAVLVVQLGFSKWYQSNRGNVLLGFASVLWIWGSLKLFLVNNL 142

Query: 719 NQIFASWMV-TSIIFTNELHRLSFRKQVFSRLPGFHMRIRTTLLMWIPEKAYYPSL---- 555
              F+  +V    IF + L+R+ F   +FSR  G  M+I   L      +A    L    
Sbjct: 143 ELSFSFPVVLIQCIFMSILYRVPFCIHIFSRALGLGMQIFAILAKGNNSEAPILLLLLFV 202

Query: 554 -PSTGWNIICSLCTKTRHWTINIASCIPWKAI--NGYQSRTLGFTDIAQLSSLRNMLFYF 384
             + G  I   L  +  +   N  S +  + +  +G + +      + Q+ +LRN+L   
Sbjct: 203 GHTVGMLIAFVLDRECGYSFFNSLSQLLLEDVTQSGPREQFFRLPLLKQVPNLRNILSGI 262

Query: 383 LKFKSLRGLHFKDPLSPKPVNXXXXXXXXXXXXXXXXGVSSLRSINPTAFPE--VPSNNL 210
           L  K  +     +P+  K +                 GVS L+S  P       + +NNL
Sbjct: 263 LNLKVTKKKELDEPICQKAIRTNAPRRALGGFAGGFCGVSGLKSNRPPVITNTTISANNL 322

Query: 209 FASCDIRVPLVTNLVXXXXXSFL-----QDMDSAKSTSIGSC 99
                      T+        F+      ++DS  STS+GSC
Sbjct: 323 SGKIGFSDTSFTDSWPYSLGVFISPSADNNVDSILSTSVGSC 364


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