BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00026611
         (1156 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638302.1| DNA polymerase eta [Medicago truncatula] gi|...   243   1e-61
ref|XP_004504645.1| PREDICTED: DNA polymerase eta-like isoform X...   239   2e-60
ref|XP_004504644.1| PREDICTED: DNA polymerase eta-like isoform X...   239   2e-60
ref|XP_004504643.1| PREDICTED: DNA polymerase eta-like isoform X...   239   2e-60
ref|XP_004504642.1| PREDICTED: DNA polymerase eta-like isoform X...   239   2e-60
ref|XP_004504641.1| PREDICTED: DNA polymerase eta-like isoform X...   239   2e-60
ref|XP_006279578.1| hypothetical protein CARUB_v10025978mg [Caps...   239   2e-60
ref|XP_006853488.1| hypothetical protein AMTR_s00032p00210310 [A...   238   4e-60
ref|XP_006585046.1| PREDICTED: DNA polymerase eta-like isoform X...   237   6e-60
ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like isoform X...   237   6e-60
ref|XP_006398103.1| hypothetical protein EUTSA_v10000807mg [Eutr...   236   2e-59
ref|NP_851130.1| Y-family DNA polymerase H [Arabidopsis thaliana...   235   2e-59
ref|NP_568638.2| Y-family DNA polymerase H [Arabidopsis thaliana...   235   2e-59
gb|EOX96839.1| DNA polymerase eta, putative isoform 3 [Theobroma...   235   3e-59
gb|EOX96838.1| Y-family DNA polymerase H isoform 2 [Theobroma ca...   235   3e-59
gb|EOX96837.1| Y-family DNA polymerase H isoform 1 [Theobroma ca...   235   3e-59
ref|XP_002863547.1| hypothetical protein ARALYDRAFT_494508 [Arab...   235   3e-59
gb|AAN39011.1| putative translesion synthesis polymerase RAD30 [...   234   6e-59
ref|XP_006355248.1| PREDICTED: DNA polymerase eta-like isoform X...   233   8e-59
ref|XP_006355249.1| PREDICTED: DNA polymerase eta-like isoform X...   231   3e-58

>ref|XP_003638302.1| DNA polymerase eta [Medicago truncatula]
           gi|355504237|gb|AES85440.1| DNA polymerase eta [Medicago
           truncatula]
          Length = 543

 Score =  243 bits (619), Expect = 1e-61
 Identities = 126/255 (49%), Positives = 166/255 (65%), Gaps = 5/255 (1%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           LGI  VG+LLQFSE KLQ+ YG NTGTWLWNIARGI+G+EV+GRLLPKS G GKTFPG +
Sbjct: 265 LGINTVGDLLQFSEEKLQQRYGINTGTWLWNIARGISGEEVEGRLLPKSHGSGKTFPGPQ 324

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK + +V HWL+EL EEL+ER+ +D++QN RIAH LTLH RAY++ +S S +KFPSKSC
Sbjct: 325 ALKTIASVQHWLNELGEELSERLDSDMDQNKRIAHTLTLHARAYKKGDSDSHKKFPSKSC 384

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYNEERKNKSYSWAVAGLSIIASNIVSPPTGVNS 540
            LRYG  KI +D+L LF+ GLR++   YN +       W +  LS+ AS IV  P+G +S
Sbjct: 385 PLRYGTTKIQEDALTLFQSGLRDFLGLYNSKTNGSENKWGITALSVSASKIVPIPSGTHS 444

Query: 541 IIRFFTCPKIAASTSADLDRCAPLYNDENEEVSLHSNDDVGEESAKSLNSDMENCLGI-- 714
           I ++F+                P  +  N+ V     D+V +E A S  S  ENC+G+  
Sbjct: 445 ITKYFS-------------ETFPHGSSSNQSV-----DNVIDEVAPSSPSGSENCMGVIP 486

Query: 715 ---SSDAPDENMNCN 750
                + P+E+   N
Sbjct: 487 NELQLECPEEDTGVN 501


>ref|XP_004504645.1| PREDICTED: DNA polymerase eta-like isoform X5 [Cicer arietinum]
          Length = 598

 Score =  239 bits (610), Expect = 2e-60
 Identities = 128/258 (49%), Positives = 169/258 (65%), Gaps = 6/258 (2%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           LG+  VG+LLQFSE KLQ+ YG NTGTWLWNIARGI+G+EV+GRLLPKS G GKTFPG +
Sbjct: 279 LGVNTVGDLLQFSEDKLQQRYGINTGTWLWNIARGISGEEVEGRLLPKSHGSGKTFPGPQ 338

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK + +V HWL+EL EEL+ER+ +D++QN RIAH LTLH RAY+  +S S +KFPSKSC
Sbjct: 339 ALKTIGSVQHWLNELCEELSERLDSDMDQNKRIAHTLTLHARAYKTGDSDSHKKFPSKSC 398

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYN-EERKNKSYSWAVAGLSIIASNIVSPPTGVN 537
            LRYG  KI +D+L LF  GLR++   YN +   N++ +W +  LS+ AS IV  P+G +
Sbjct: 399 PLRYGTTKIQEDALTLFLAGLRDFLSFYNFKTHGNENNNWGITALSVSASKIVPIPSGTH 458

Query: 538 SIIRFFTCPKIAASTSADLDRCAPLYNDENEEVSLHSNDDVGEESAKSLNSDMENCLGI- 714
           SI ++F+                P  +  N+ V     DDV +E A S  S  +NCLG+ 
Sbjct: 459 SIAKYFS-------------ERFPSGSSSNQSV-----DDVIDEVAPSSPSGSDNCLGVI 500

Query: 715 ----SSDAPDENMNCNDS 756
                 + P+E+   N S
Sbjct: 501 PSELQLEYPEEDTGVNHS 518


>ref|XP_004504644.1| PREDICTED: DNA polymerase eta-like isoform X4 [Cicer arietinum]
          Length = 703

 Score =  239 bits (610), Expect = 2e-60
 Identities = 128/258 (49%), Positives = 169/258 (65%), Gaps = 6/258 (2%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           LG+  VG+LLQFSE KLQ+ YG NTGTWLWNIARGI+G+EV+GRLLPKS G GKTFPG +
Sbjct: 257 LGVNTVGDLLQFSEDKLQQRYGINTGTWLWNIARGISGEEVEGRLLPKSHGSGKTFPGPQ 316

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK + +V HWL+EL EEL+ER+ +D++QN RIAH LTLH RAY+  +S S +KFPSKSC
Sbjct: 317 ALKTIGSVQHWLNELCEELSERLDSDMDQNKRIAHTLTLHARAYKTGDSDSHKKFPSKSC 376

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYN-EERKNKSYSWAVAGLSIIASNIVSPPTGVN 537
            LRYG  KI +D+L LF  GLR++   YN +   N++ +W +  LS+ AS IV  P+G +
Sbjct: 377 PLRYGTTKIQEDALTLFLAGLRDFLSFYNFKTHGNENNNWGITALSVSASKIVPIPSGTH 436

Query: 538 SIIRFFTCPKIAASTSADLDRCAPLYNDENEEVSLHSNDDVGEESAKSLNSDMENCLGI- 714
           SI ++F+                P  +  N+ V     DDV +E A S  S  +NCLG+ 
Sbjct: 437 SIAKYFS-------------ERFPSGSSSNQSV-----DDVIDEVAPSSPSGSDNCLGVI 478

Query: 715 ----SSDAPDENMNCNDS 756
                 + P+E+   N S
Sbjct: 479 PSELQLEYPEEDTGVNHS 496


>ref|XP_004504643.1| PREDICTED: DNA polymerase eta-like isoform X3 [Cicer arietinum]
          Length = 711

 Score =  239 bits (610), Expect = 2e-60
 Identities = 128/258 (49%), Positives = 169/258 (65%), Gaps = 6/258 (2%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           LG+  VG+LLQFSE KLQ+ YG NTGTWLWNIARGI+G+EV+GRLLPKS G GKTFPG +
Sbjct: 265 LGVNTVGDLLQFSEDKLQQRYGINTGTWLWNIARGISGEEVEGRLLPKSHGSGKTFPGPQ 324

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK + +V HWL+EL EEL+ER+ +D++QN RIAH LTLH RAY+  +S S +KFPSKSC
Sbjct: 325 ALKTIGSVQHWLNELCEELSERLDSDMDQNKRIAHTLTLHARAYKTGDSDSHKKFPSKSC 384

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYN-EERKNKSYSWAVAGLSIIASNIVSPPTGVN 537
            LRYG  KI +D+L LF  GLR++   YN +   N++ +W +  LS+ AS IV  P+G +
Sbjct: 385 PLRYGTTKIQEDALTLFLAGLRDFLSFYNFKTHGNENNNWGITALSVSASKIVPIPSGTH 444

Query: 538 SIIRFFTCPKIAASTSADLDRCAPLYNDENEEVSLHSNDDVGEESAKSLNSDMENCLGI- 714
           SI ++F+                P  +  N+ V     DDV +E A S  S  +NCLG+ 
Sbjct: 445 SIAKYFS-------------ERFPSGSSSNQSV-----DDVIDEVAPSSPSGSDNCLGVI 486

Query: 715 ----SSDAPDENMNCNDS 756
                 + P+E+   N S
Sbjct: 487 PSELQLEYPEEDTGVNHS 504


>ref|XP_004504642.1| PREDICTED: DNA polymerase eta-like isoform X2 [Cicer arietinum]
          Length = 717

 Score =  239 bits (610), Expect = 2e-60
 Identities = 128/258 (49%), Positives = 169/258 (65%), Gaps = 6/258 (2%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           LG+  VG+LLQFSE KLQ+ YG NTGTWLWNIARGI+G+EV+GRLLPKS G GKTFPG +
Sbjct: 271 LGVNTVGDLLQFSEDKLQQRYGINTGTWLWNIARGISGEEVEGRLLPKSHGSGKTFPGPQ 330

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK + +V HWL+EL EEL+ER+ +D++QN RIAH LTLH RAY+  +S S +KFPSKSC
Sbjct: 331 ALKTIGSVQHWLNELCEELSERLDSDMDQNKRIAHTLTLHARAYKTGDSDSHKKFPSKSC 390

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYN-EERKNKSYSWAVAGLSIIASNIVSPPTGVN 537
            LRYG  KI +D+L LF  GLR++   YN +   N++ +W +  LS+ AS IV  P+G +
Sbjct: 391 PLRYGTTKIQEDALTLFLAGLRDFLSFYNFKTHGNENNNWGITALSVSASKIVPIPSGTH 450

Query: 538 SIIRFFTCPKIAASTSADLDRCAPLYNDENEEVSLHSNDDVGEESAKSLNSDMENCLGI- 714
           SI ++F+                P  +  N+ V     DDV +E A S  S  +NCLG+ 
Sbjct: 451 SIAKYFS-------------ERFPSGSSSNQSV-----DDVIDEVAPSSPSGSDNCLGVI 492

Query: 715 ----SSDAPDENMNCNDS 756
                 + P+E+   N S
Sbjct: 493 PSELQLEYPEEDTGVNHS 510


>ref|XP_004504641.1| PREDICTED: DNA polymerase eta-like isoform X1 [Cicer arietinum]
          Length = 725

 Score =  239 bits (610), Expect = 2e-60
 Identities = 128/258 (49%), Positives = 169/258 (65%), Gaps = 6/258 (2%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           LG+  VG+LLQFSE KLQ+ YG NTGTWLWNIARGI+G+EV+GRLLPKS G GKTFPG +
Sbjct: 279 LGVNTVGDLLQFSEDKLQQRYGINTGTWLWNIARGISGEEVEGRLLPKSHGSGKTFPGPQ 338

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK + +V HWL+EL EEL+ER+ +D++QN RIAH LTLH RAY+  +S S +KFPSKSC
Sbjct: 339 ALKTIGSVQHWLNELCEELSERLDSDMDQNKRIAHTLTLHARAYKTGDSDSHKKFPSKSC 398

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYN-EERKNKSYSWAVAGLSIIASNIVSPPTGVN 537
            LRYG  KI +D+L LF  GLR++   YN +   N++ +W +  LS+ AS IV  P+G +
Sbjct: 399 PLRYGTTKIQEDALTLFLAGLRDFLSFYNFKTHGNENNNWGITALSVSASKIVPIPSGTH 458

Query: 538 SIIRFFTCPKIAASTSADLDRCAPLYNDENEEVSLHSNDDVGEESAKSLNSDMENCLGI- 714
           SI ++F+                P  +  N+ V     DDV +E A S  S  +NCLG+ 
Sbjct: 459 SIAKYFS-------------ERFPSGSSSNQSV-----DDVIDEVAPSSPSGSDNCLGVI 500

Query: 715 ----SSDAPDENMNCNDS 756
                 + P+E+   N S
Sbjct: 501 PSELQLEYPEEDTGVNHS 518


>ref|XP_006279578.1| hypothetical protein CARUB_v10025978mg [Capsella rubella]
           gi|482548282|gb|EOA12476.1| hypothetical protein
           CARUB_v10025978mg [Capsella rubella]
          Length = 711

 Score =  239 bits (609), Expect = 2e-60
 Identities = 116/197 (58%), Positives = 147/197 (74%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           LG+  VG+LLQFSE+KLQE YG NTGTWLWNIARGI+G+EV+GRLLPKS G GKTFPG R
Sbjct: 305 LGVDTVGDLLQFSETKLQEHYGINTGTWLWNIARGISGEEVQGRLLPKSHGSGKTFPGPR 364

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK+++ V HWL++LSEEL+ER+ +DLE N RIA  LTLH  A++ ++S S +KFPSKSC
Sbjct: 365 ALKSLSTVQHWLNQLSEELSERLSSDLELNKRIASTLTLHASAFKSRDSDSHKKFPSKSC 424

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYNEERKNKSYSWAVAGLSIIASNIVSPPTGVNS 540
            LRYG  KI +D+  LF+  LREY   +  +  NK  +W + GLS+ AS IV  P+G +S
Sbjct: 425 PLRYGVTKIQEDAFNLFQAALREYMGPFGSKPGNKQETWRITGLSVSASKIVDIPSGTSS 484

Query: 541 IIRFFTCPKIAASTSAD 591
           I+R+F     A S SAD
Sbjct: 485 IMRYFQSQSTAPSRSAD 501


>ref|XP_006853488.1| hypothetical protein AMTR_s00032p00210310 [Amborella trichopoda]
            gi|548857141|gb|ERN14955.1| hypothetical protein
            AMTR_s00032p00210310 [Amborella trichopoda]
          Length = 577

 Score =  238 bits (606), Expect = 4e-60
 Identities = 124/259 (47%), Positives = 172/259 (66%), Gaps = 5/259 (1%)
 Frame = +1

Query: 1    LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
            LG+  VG+LLQFSE KLQ  YG NTGTWLWN+ARG++G+EVKGR+LPKSQGCGKTFPG R
Sbjct: 264  LGVHNVGDLLQFSEEKLQNHYGVNTGTWLWNVARGMSGEEVKGRILPKSQGCGKTFPGPR 323

Query: 181  ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
            AL+ + +V HWL  L EEL++R+++DL+QN R+A  LTLH RAY+  +S S++KFPSKSC
Sbjct: 324  ALRTIESVEHWLGALCEELSDRVESDLKQNKRVAQTLTLHARAYKVDDSESQKKFPSKSC 383

Query: 361  TLRYGKEKILQDSLFLFERGLREYCEGYNEERKNKS--YSWAVAGLSIIASNIVSPPTGV 534
             LRYG  K+ +D+  LFE  LREY   Y  +++  +   +W + GLS+ A+NI++ P GV
Sbjct: 384  PLRYGSAKLHEDARKLFESALREYMGIYGTDKQAVAGGNNWRIIGLSVAATNILATPQGV 443

Query: 535  NSIIRFFTCPKIAASTSADLDRCAPLYNDENEEVSLHSNDDVGEESA---KSLNSDMENC 705
             SI +FF+     +S+S + DR        N + S+  +   G E+A        DM+  
Sbjct: 444  TSITKFFSTSNPPSSSSLECDR--------NIQESISFSTPSGCEAATLDMDHTLDMDQE 495

Query: 706  LGISSDAPDENMNCNDSST 762
            LG  S + +E ++  D  T
Sbjct: 496  LGQPSSSNEETIHLGDKDT 514


>ref|XP_006585046.1| PREDICTED: DNA polymerase eta-like isoform X2 [Glycine max]
          Length = 718

 Score =  237 bits (605), Expect = 6e-60
 Identities = 125/239 (52%), Positives = 162/239 (67%), Gaps = 1/239 (0%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           LG+  VG+LLQFSE KLQ+ YG NTGTWLWNIARGI+G+EV+GRLLPKS G GKTFPG +
Sbjct: 280 LGVNTVGDLLQFSEEKLQQWYGINTGTWLWNIARGISGEEVEGRLLPKSHGSGKTFPGPQ 339

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK + +V HWL++L EELNER+ +DL+QN RIA  LTLH RAY+  +S S RKFPSKSC
Sbjct: 340 ALKTVDSVQHWLNQLCEELNERLHSDLDQNKRIAQTLTLHARAYKTGDSDSHRKFPSKSC 399

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYN-EERKNKSYSWAVAGLSIIASNIVSPPTGVN 537
            LRYG  KI +D+L LF+ GLR++   YN +   N++ +W V  LS+ AS +VS P+G +
Sbjct: 400 PLRYGTRKIQEDALILFQAGLRDFLGFYNCKAHGNENNNWGVTSLSVSASKLVSIPSGTH 459

Query: 538 SIIRFFTCPKIAASTSADLDRCAPLYNDENEEVSLHSNDDVGEESAKSLNSDMENCLGI 714
           SI+++F     ++STS                    S D V +E+A S  S   NC G+
Sbjct: 460 SIVKYFGGSFPSSSTSN------------------QSLDVVIDEAAPSSPSGSGNCSGL 500


>ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like isoform X1 [Glycine max]
          Length = 703

 Score =  237 bits (605), Expect = 6e-60
 Identities = 125/239 (52%), Positives = 162/239 (67%), Gaps = 1/239 (0%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           LG+  VG+LLQFSE KLQ+ YG NTGTWLWNIARGI+G+EV+GRLLPKS G GKTFPG +
Sbjct: 265 LGVNTVGDLLQFSEEKLQQWYGINTGTWLWNIARGISGEEVEGRLLPKSHGSGKTFPGPQ 324

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK + +V HWL++L EELNER+ +DL+QN RIA  LTLH RAY+  +S S RKFPSKSC
Sbjct: 325 ALKTVDSVQHWLNQLCEELNERLHSDLDQNKRIAQTLTLHARAYKTGDSDSHRKFPSKSC 384

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYN-EERKNKSYSWAVAGLSIIASNIVSPPTGVN 537
            LRYG  KI +D+L LF+ GLR++   YN +   N++ +W V  LS+ AS +VS P+G +
Sbjct: 385 PLRYGTRKIQEDALILFQAGLRDFLGFYNCKAHGNENNNWGVTSLSVSASKLVSIPSGTH 444

Query: 538 SIIRFFTCPKIAASTSADLDRCAPLYNDENEEVSLHSNDDVGEESAKSLNSDMENCLGI 714
           SI+++F     ++STS                    S D V +E+A S  S   NC G+
Sbjct: 445 SIVKYFGGSFPSSSTSN------------------QSLDVVIDEAAPSSPSGSGNCSGL 485


>ref|XP_006398103.1| hypothetical protein EUTSA_v10000807mg [Eutrema salsugineum]
            gi|557099192|gb|ESQ39556.1| hypothetical protein
            EUTSA_v10000807mg [Eutrema salsugineum]
          Length = 667

 Score =  236 bits (601), Expect = 2e-59
 Identities = 127/262 (48%), Positives = 167/262 (63%), Gaps = 13/262 (4%)
 Frame = +1

Query: 1    LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
            LGI  VG+LLQFSE+KLQE YG NTGTWLWNIARGI+G+EV+GRLLPKS G GKTFPG R
Sbjct: 265  LGIDTVGDLLQFSETKLQEHYGINTGTWLWNIARGISGEEVQGRLLPKSHGSGKTFPGPR 324

Query: 181  ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
            ALK+++ V HWL++LSEEL+ER+ +DLEQN RIA  LTLH  A+  ++S S +KFPSKSC
Sbjct: 325  ALKSLSNVQHWLNQLSEELSERLSSDLEQNKRIASTLTLHASAFRSRDSDSHKKFPSKSC 384

Query: 361  TLRYGKEKILQDSLFLFERGLREYCEGYNEERKNKSYSWAVAGLSIIASNIVSPPTGVNS 540
             LRYG  K+ +D+  LF+  LREY   +     NK  +W + GLS+ AS IV  P+G +S
Sbjct: 385  PLRYGVTKVQEDAFNLFQAALREYMGPFG----NKQETWRITGLSVSASKIVDIPSGTSS 440

Query: 541  IIRFFTCPKIAASTSAD-------------LDRCAPLYNDENEEVSLHSNDDVGEESAKS 681
            I+R+F       S SAD              + C+   + E +  SL      G+  A  
Sbjct: 441  IMRYFQSQSTVPSCSADGCVQEHIVNAPSASEGCSEQRSVETQAASLE-----GDTGATY 495

Query: 682  LNSDMENCLGISSDAPDENMNC 747
               D++N        P+++M+C
Sbjct: 496  TLPDLDNLHKNIDLIPEKDMSC 517


>ref|NP_851130.1| Y-family DNA polymerase H [Arabidopsis thaliana]
           gi|13430742|gb|AAK25993.1|AF360283_1 putative
           DNA-damage-inducible protein P [Arabidopsis thaliana]
           gi|21280927|gb|AAM44927.1| putative DNA-damage-inducible
           protein P [Arabidopsis thaliana]
           gi|332007771|gb|AED95154.1| Y-family DNA polymerase H
           [Arabidopsis thaliana]
          Length = 588

 Score =  235 bits (600), Expect = 2e-59
 Identities = 116/198 (58%), Positives = 147/198 (74%), Gaps = 1/198 (0%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           LG+  VG+LLQFSE+KLQE YG NTGTWLWNIARGI+G+EV+GRLLPKS G GKTFPG R
Sbjct: 181 LGVDTVGDLLQFSETKLQEHYGVNTGTWLWNIARGISGEEVQGRLLPKSHGSGKTFPGPR 240

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK+++ V HWL++LSEEL+ER+ +DLEQN RIA  LTLH  A+  K+S S +KFPSKSC
Sbjct: 241 ALKSLSTVQHWLNQLSEELSERLGSDLEQNKRIASTLTLHASAFRSKDSDSHKKFPSKSC 300

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYN-EERKNKSYSWAVAGLSIIASNIVSPPTGVN 537
            +RYG  KI +D+  LF+  LREY   +  + + NK  +W + GLS+ AS IV  P+G +
Sbjct: 301 PMRYGVTKIQEDAFNLFQAALREYMGSFGIKPQGNKLETWRITGLSVSASKIVDIPSGTS 360

Query: 538 SIIRFFTCPKIAASTSAD 591
           SI+R+F       S SAD
Sbjct: 361 SIMRYFQSQPTVPSRSAD 378


>ref|NP_568638.2| Y-family DNA polymerase H [Arabidopsis thaliana]
           gi|75244699|sp|Q8H2D5.1|POLH_ARATH RecName: Full=DNA
           polymerase eta; AltName: Full=Radiation-sensitive
           protein 30; Short=AtRAD30; AltName: Full=Y-family DNA
           polymerase H; Short=AtPOLH gi|23954185|emb|CAC94893.1|
           putative DNA polymerase eta [Arabidopsis thaliana]
           gi|332007772|gb|AED95155.1| Y-family DNA polymerase H
           [Arabidopsis thaliana]
          Length = 672

 Score =  235 bits (600), Expect = 2e-59
 Identities = 116/198 (58%), Positives = 147/198 (74%), Gaps = 1/198 (0%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           LG+  VG+LLQFSE+KLQE YG NTGTWLWNIARGI+G+EV+GRLLPKS G GKTFPG R
Sbjct: 265 LGVDTVGDLLQFSETKLQEHYGVNTGTWLWNIARGISGEEVQGRLLPKSHGSGKTFPGPR 324

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK+++ V HWL++LSEEL+ER+ +DLEQN RIA  LTLH  A+  K+S S +KFPSKSC
Sbjct: 325 ALKSLSTVQHWLNQLSEELSERLGSDLEQNKRIASTLTLHASAFRSKDSDSHKKFPSKSC 384

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYN-EERKNKSYSWAVAGLSIIASNIVSPPTGVN 537
            +RYG  KI +D+  LF+  LREY   +  + + NK  +W + GLS+ AS IV  P+G +
Sbjct: 385 PMRYGVTKIQEDAFNLFQAALREYMGSFGIKPQGNKLETWRITGLSVSASKIVDIPSGTS 444

Query: 538 SIIRFFTCPKIAASTSAD 591
           SI+R+F       S SAD
Sbjct: 445 SIMRYFQSQPTVPSRSAD 462


>gb|EOX96839.1| DNA polymerase eta, putative isoform 3 [Theobroma cacao]
          Length = 613

 Score =  235 bits (599), Expect = 3e-59
 Identities = 126/235 (53%), Positives = 158/235 (67%), Gaps = 11/235 (4%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           +G+  VG+LLQFSE KLQE YG NTGTWLWNIARGING+ V+GRLLPKS G GKTFPG R
Sbjct: 265 MGVNTVGDLLQFSEEKLQERYGLNTGTWLWNIARGINGEAVEGRLLPKSHGSGKTFPGPR 324

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK ++AV HWL++L EEL+ER+ +DL+QN RIAH LTLHVRAY+  +S S++KFPSKSC
Sbjct: 325 ALKTVSAVQHWLNQLCEELSERLCSDLDQNKRIAHTLTLHVRAYKSSDSDSQKKFPSKSC 384

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYNEERKNKSYS-WAVAGLSIIASNIVSPPTGVN 537
            LRYG  KI +D+  LF+ GLREY   Y  + +   YS W +  LS+ AS IV  P+G  
Sbjct: 385 PLRYGTAKIQEDAFNLFQAGLREYIGLYGGKSEGSHYSGWGITSLSVSASKIVPIPSGTC 444

Query: 538 SIIRFFTCPKIAASTS--------ADLDRCAPLYNDENEEVSLHSN--DDVGEES 672
           SI ++F     +  +S         D    +P  N+   EV+L     D  GEES
Sbjct: 445 SIAKYFHWQTSSHFSSIQSPENLRMDATHLSPPGNESYSEVNLPEPKIDFSGEES 499


>gb|EOX96838.1| Y-family DNA polymerase H isoform 2 [Theobroma cacao]
          Length = 649

 Score =  235 bits (599), Expect = 3e-59
 Identities = 126/235 (53%), Positives = 158/235 (67%), Gaps = 11/235 (4%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           +G+  VG+LLQFSE KLQE YG NTGTWLWNIARGING+ V+GRLLPKS G GKTFPG R
Sbjct: 201 MGVNTVGDLLQFSEEKLQERYGLNTGTWLWNIARGINGEAVEGRLLPKSHGSGKTFPGPR 260

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK ++AV HWL++L EEL+ER+ +DL+QN RIAH LTLHVRAY+  +S S++KFPSKSC
Sbjct: 261 ALKTVSAVQHWLNQLCEELSERLCSDLDQNKRIAHTLTLHVRAYKSSDSDSQKKFPSKSC 320

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYNEERKNKSYS-WAVAGLSIIASNIVSPPTGVN 537
            LRYG  KI +D+  LF+ GLREY   Y  + +   YS W +  LS+ AS IV  P+G  
Sbjct: 321 PLRYGTAKIQEDAFNLFQAGLREYIGLYGGKSEGSHYSGWGITSLSVSASKIVPIPSGTC 380

Query: 538 SIIRFFTCPKIAASTS--------ADLDRCAPLYNDENEEVSLHSN--DDVGEES 672
           SI ++F     +  +S         D    +P  N+   EV+L     D  GEES
Sbjct: 381 SIAKYFHWQTSSHFSSIQSPENLRMDATHLSPPGNESYSEVNLPEPKIDFSGEES 435


>gb|EOX96837.1| Y-family DNA polymerase H isoform 1 [Theobroma cacao]
          Length = 704

 Score =  235 bits (599), Expect = 3e-59
 Identities = 126/235 (53%), Positives = 158/235 (67%), Gaps = 11/235 (4%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           +G+  VG+LLQFSE KLQE YG NTGTWLWNIARGING+ V+GRLLPKS G GKTFPG R
Sbjct: 265 MGVNTVGDLLQFSEEKLQERYGLNTGTWLWNIARGINGEAVEGRLLPKSHGSGKTFPGPR 324

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK ++AV HWL++L EEL+ER+ +DL+QN RIAH LTLHVRAY+  +S S++KFPSKSC
Sbjct: 325 ALKTVSAVQHWLNQLCEELSERLCSDLDQNKRIAHTLTLHVRAYKSSDSDSQKKFPSKSC 384

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYNEERKNKSYS-WAVAGLSIIASNIVSPPTGVN 537
            LRYG  KI +D+  LF+ GLREY   Y  + +   YS W +  LS+ AS IV  P+G  
Sbjct: 385 PLRYGTAKIQEDAFNLFQAGLREYIGLYGGKSEGSHYSGWGITSLSVSASKIVPIPSGTC 444

Query: 538 SIIRFFTCPKIAASTS--------ADLDRCAPLYNDENEEVSLHSN--DDVGEES 672
           SI ++F     +  +S         D    +P  N+   EV+L     D  GEES
Sbjct: 445 SIAKYFHWQTSSHFSSIQSPENLRMDATHLSPPGNESYSEVNLPEPKIDFSGEES 499


>ref|XP_002863547.1| hypothetical protein ARALYDRAFT_494508 [Arabidopsis lyrata subsp.
           lyrata] gi|297309382|gb|EFH39806.1| hypothetical protein
           ARALYDRAFT_494508 [Arabidopsis lyrata subsp. lyrata]
          Length = 672

 Score =  235 bits (599), Expect = 3e-59
 Identities = 116/198 (58%), Positives = 148/198 (74%), Gaps = 1/198 (0%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           LGI  VG+LLQ+SE+KLQE YG NTGTWLWNIARGI+G+EV+GRLLPKS G GKTFPG R
Sbjct: 265 LGIDTVGDLLQYSETKLQEHYGINTGTWLWNIARGISGEEVQGRLLPKSHGSGKTFPGPR 324

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK+++ V HWL++LSEEL+ER+ +DLEQN RIA  LTLH  A++ ++S+S +KFPSKSC
Sbjct: 325 ALKSLSTVQHWLNQLSEELSERLSSDLEQNKRIASTLTLHASAFKSRDSNSHKKFPSKSC 384

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGY-NEERKNKSYSWAVAGLSIIASNIVSPPTGVN 537
            LRYG  KI +D+  LF+   REY   + ++ R NK  +W + GLSI AS IV  P+G +
Sbjct: 385 PLRYGVTKIQEDAFNLFQAAFREYMGPFGSKPRGNKQETWRITGLSISASKIVDIPSGTS 444

Query: 538 SIIRFFTCPKIAASTSAD 591
           SI+R+F       S S D
Sbjct: 445 SIMRYFQSESTVPSRSVD 462


>gb|AAN39011.1| putative translesion synthesis polymerase RAD30 [Arabidopsis
           thaliana]
          Length = 672

 Score =  234 bits (596), Expect = 6e-59
 Identities = 116/198 (58%), Positives = 146/198 (73%), Gaps = 1/198 (0%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           LG+  VG+LLQFSE+KLQE YG NTGTWLWNIARGI+G+EV+GRLLPKS G GKTFPG R
Sbjct: 265 LGVDTVGDLLQFSETKLQEHYGVNTGTWLWNIARGISGEEVQGRLLPKSHGSGKTFPGPR 324

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK+++ V HWL++LSEEL+ER+ +DLEQN RIA  LTLH  A+  K+S S +KFPSKSC
Sbjct: 325 ALKSLSTVQHWLNQLSEELSERLGSDLEQNKRIASTLTLHASAFRSKDSDSHKKFPSKSC 384

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYN-EERKNKSYSWAVAGLSIIASNIVSPPTGVN 537
            +RYG  KI +D+  LF+  LREY      + + NK  +W + GLS+ AS IV  P+G +
Sbjct: 385 PMRYGVTKIQEDAFNLFQAALREYMGSVGIKPQGNKLETWRITGLSVSASKIVDIPSGTS 444

Query: 538 SIIRFFTCPKIAASTSAD 591
           SI+R+F       S SAD
Sbjct: 445 SIMRYFQSQPTVPSRSAD 462


>ref|XP_006355248.1| PREDICTED: DNA polymerase eta-like isoform X1 [Solanum tuberosum]
          Length = 698

 Score =  233 bits (595), Expect = 8e-59
 Identities = 125/222 (56%), Positives = 156/222 (70%), Gaps = 6/222 (2%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           LG+  VG+LLQFSE KLQE YG NTG+WLWN ARGING+EVK RLLP S G GKTFPG R
Sbjct: 264 LGVNTVGDLLQFSEEKLQEYYGVNTGSWLWNTARGINGEEVKERLLPNSHGSGKTFPGPR 323

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK + +V  WL+EL EEL+ER+Q+DLEQN RIAH LTLH  AY+  +  S RKFPSKSC
Sbjct: 324 ALKTVASVEKWLNELCEELSERLQSDLEQNKRIAHTLTLHAHAYKSNDGDSFRKFPSKSC 383

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYNEE-RKNKSYSWAVAGLSIIASNIVSPPTGVN 537
            LRYG  KI +D+L LF+ GLREY   +N +   N++  W + GLS+ AS IV+ P+G  
Sbjct: 384 PLRYGTSKIKEDALSLFQAGLREYLGLFNVKISGNQNNGWGITGLSVSASKIVAIPSGTR 443

Query: 538 SIIRFF-----TCPKIAASTSADLDRCAPLYNDENEEVSLHS 648
           SI+ +F     + P++  S S  L + APL +  +EE SL S
Sbjct: 444 SIMNYFHNQEESFPQVKLS-SEQLIQDAPLLS-PSEEDSLES 483


>ref|XP_006355249.1| PREDICTED: DNA polymerase eta-like isoform X2 [Solanum tuberosum]
          Length = 697

 Score =  231 bits (590), Expect = 3e-58
 Identities = 120/218 (55%), Positives = 152/218 (69%), Gaps = 6/218 (2%)
 Frame = +1

Query: 1   LGIKVVGELLQFSESKLQELYGANTGTWLWNIARGINGDEVKGRLLPKSQGCGKTFPGSR 180
           LG+  VG+LLQFSE KLQE YG NTG+WLWN ARGING+EVK RLLP S G GKTFPG R
Sbjct: 264 LGVNTVGDLLQFSEEKLQEYYGVNTGSWLWNTARGINGEEVKERLLPNSHGSGKTFPGPR 323

Query: 181 ALKNMTAVNHWLSELSEELNERIQADLEQNIRIAHQLTLHVRAYEEKNSSSKRKFPSKSC 360
           ALK + +V  WL+EL EEL+ER+Q+DLEQN RIAH LTLH  AY+  +  S RKFPSKSC
Sbjct: 324 ALKTVASVEKWLNELCEELSERLQSDLEQNKRIAHTLTLHAHAYKSNDGDSFRKFPSKSC 383

Query: 361 TLRYGKEKILQDSLFLFERGLREYCEGYNEE-RKNKSYSWAVAGLSIIASNIVSPPTGVN 537
            LRYG  KI +D+L LF+ GLREY   +N +   N++  W + GLS+ AS IV+ P+G  
Sbjct: 384 PLRYGTSKIKEDALSLFQAGLREYLGLFNVKISGNQNNGWGITGLSVSASKIVAIPSGTR 443

Query: 538 SIIRFF-----TCPKIAASTSADLDRCAPLYNDENEEV 636
           SI+ +F     + P++  S S  L + APL +   + +
Sbjct: 444 SIMNYFHNQEESFPQVKLS-SEQLIQDAPLLSPSEDSL 480