BLASTX nr result
ID: Ephedra25_contig00026597
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra25_contig00026597 (557 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAS86818.1| RNA polymerase II second largest subunit, partial... 270 6e-72 gb|AAY85190.1| RNA polymerase II second largest subunit [Aextoxi... 264 6e-70 gb|AAW22905.1| RNA polymerase II second largest subunit [Welwits... 264 6e-70 gb|AAY85223.1| RNA polymerase II second largest subunit [Nelumbo... 263 7e-70 gb|AAY85216.1| RNA polymerase II second largest subunit [Hibbert... 263 1e-69 gb|AFV74907.1| RNA polymerase II second largest subunit, partial... 263 1e-69 gb|AAY85204.1| RNA polymerase II second largest subunit [Dilleni... 262 2e-69 gb|AAW22929.1| RNA polymerase II second largest subunit [Musa ve... 262 2e-69 gb|AAB94063.1| RPB140 [Ginkgo biloba] 263 2e-69 gb|AAS86820.1| RNA polymerase II second largest subunit, partial... 262 2e-69 ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su... 261 3e-69 gb|AAW22908.1| RNA polymerase II second largest subunit [Dacrydi... 261 3e-69 gb|ESW20162.1| hypothetical protein PHAVU_006G185800g [Phaseolus... 261 4e-69 ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su... 261 4e-69 ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [A... 261 4e-69 gb|AAY85199.1| RNA polymerase II second largest subunit [Cissus ... 261 4e-69 gb|AAY85208.1| RNA polymerase II second largest subunit [Euptele... 261 4e-69 gb|AAY85203.1| RNA polymerase II second largest subunit [Dicentr... 261 4e-69 gb|AAW22922.1| RNA polymerase II second largest subunit [Amborel... 261 4e-69 gb|ESW10701.1| hypothetical protein PHAVU_009G230400g [Phaseolus... 261 5e-69 >gb|AAS86818.1| RNA polymerase II second largest subunit, partial [Gnetum gnemon] Length = 546 Score = 270 bits (691), Expect(2) = 6e-72 Identities = 129/168 (76%), Positives = 148/168 (88%), Gaps = 2/168 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P LV+TLK LRRQV +N E+G+VRDIP RELR+YTD+GRC+RPLFVV++Q LLIKK+D+ Sbjct: 68 PETLVKTLKQLRRQVDVNPEVGVVRDIPLRELRLYTDYGRCSRPLFVVEKQQLLIKKADI 127 Query: 186 ERLQS--DPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTHC 359 RLQ PE GWH+LV KG IEY+D +EEETTMISMTI +LV +RKNP+ AY+NTYTHC Sbjct: 128 IRLQERVSPEEGWHDLVAKGFIEYVDTEEEETTMISMTITDLVQSRKNPKEAYSNTYTHC 187 Query: 360 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM Sbjct: 188 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 235 Score = 26.6 bits (57), Expect(2) = 6e-72 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 236 DTLAYVLYYPQK 247 >gb|AAY85190.1| RNA polymerase II second largest subunit [Aextoxicon punctatum] Length = 873 Score = 264 bits (674), Expect(2) = 6e-70 Identities = 123/169 (72%), Positives = 148/169 (87%), Gaps = 3/169 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P++LV+TL+ LRRQV +N+E+G++RDI +ELR+YTD+GRC+RPLF+V++Q LLIKK D+ Sbjct: 479 PDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI 538 Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356 + LQ S EGGWH+LV KG IEY+D +EEETTMISMTI +L+T R NPE AY+ TYTH Sbjct: 539 QALQQRESHEEGGWHDLVAKGFIEYVDTEEEETTMISMTINDLITARLNPEEAYSETYTH 598 Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM Sbjct: 599 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 647 Score = 26.6 bits (57), Expect(2) = 6e-70 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 648 DTLAYVLYYPQK 659 >gb|AAW22905.1| RNA polymerase II second largest subunit [Welwitschia mirabilis] Length = 553 Score = 264 bits (674), Expect(2) = 6e-70 Identities = 127/168 (75%), Positives = 145/168 (86%), Gaps = 2/168 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P LV+TLK LRRQV +N E+G+VRDIP RELR+YTD+GRC+RPLFVV++Q LLIKKS + Sbjct: 75 PETLVKTLKQLRRQVDVNPEVGVVRDIPLRELRLYTDYGRCSRPLFVVEKQQLLIKKSHI 134 Query: 186 ERLQS--DPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTHC 359 RLQ P+ GWH+LV KG IEY+D +EEETTMISMTI +LV RKNP AY++TYTHC Sbjct: 135 IRLQERMSPDEGWHDLVAKGFIEYVDTEEEETTMISMTITDLVQARKNPLEAYSHTYTHC 194 Query: 360 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM Sbjct: 195 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 242 Score = 26.6 bits (57), Expect(2) = 6e-70 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 243 DTLAYVLYYPQK 254 >gb|AAY85223.1| RNA polymerase II second largest subunit [Nelumbo nucifera] Length = 865 Score = 263 bits (673), Expect(2) = 7e-70 Identities = 124/169 (73%), Positives = 146/169 (86%), Gaps = 3/169 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P +LV+TL+ LRRQV +N+E+G++RDI +ELR+YTD+GRC+RPLF+V++Q LLIKK D+ Sbjct: 471 PELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI 530 Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356 LQ S EGGWH+LV KG IEY+D +EEETTMISMTI +LVT R NPE AY+ TYTH Sbjct: 531 RALQQRESSEEGGWHDLVAKGFIEYVDTEEEETTMISMTINDLVTARLNPEEAYSETYTH 590 Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM Sbjct: 591 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 639 Score = 26.6 bits (57), Expect(2) = 7e-70 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 640 DTLAYVLYYPQK 651 >gb|AAY85216.1| RNA polymerase II second largest subunit [Hibbertia scandens] Length = 873 Score = 263 bits (671), Expect(2) = 1e-69 Identities = 123/169 (72%), Positives = 148/169 (87%), Gaps = 3/169 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P++LV+TL+ LRRQV +N+E+G++RDI +ELR+YTD+GRC+RPLF+V++Q LLIKK D+ Sbjct: 479 PDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI 538 Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356 LQ S +GGWH+LV KG IEY+D +EEETTMISMTI +LVT R NPE AY++TYTH Sbjct: 539 RALQQRESPEDGGWHDLVAKGFIEYVDTEEEETTMISMTINDLVTARLNPEEAYSDTYTH 598 Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM Sbjct: 599 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 647 Score = 26.6 bits (57), Expect(2) = 1e-69 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 648 DTLAYVLYYPQK 659 >gb|AFV74907.1| RNA polymerase II second largest subunit, partial [Olax imbricata] Length = 568 Score = 263 bits (671), Expect(2) = 1e-69 Identities = 125/169 (73%), Positives = 146/169 (86%), Gaps = 3/169 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P++LV TL+ LRR+V +N+E+G+VRDI +ELRIYTD+GRC+RPLF+V++Q LLIKK D+ Sbjct: 62 PDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI 121 Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356 + LQ S EGGWH+LV KG IEY+D +EEETTMISMTI +LVT R NPE AYT TYTH Sbjct: 122 QALQQRESAEEGGWHDLVAKGFIEYIDTEEEETTMISMTINDLVTARINPEEAYTETYTH 181 Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQ RM Sbjct: 182 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRM 230 Score = 26.6 bits (57), Expect(2) = 1e-69 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 231 DTLAYVLYYPQK 242 >gb|AAY85204.1| RNA polymerase II second largest subunit [Dillenia suffruticosa] Length = 868 Score = 262 bits (670), Expect(2) = 2e-69 Identities = 123/169 (72%), Positives = 148/169 (87%), Gaps = 3/169 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P++LV+TL+ LRRQV +N+E+G++RDI +ELR+YTD+GRC+RPLF+V++Q LLIKK D+ Sbjct: 474 PDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI 533 Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356 LQ S EGGWH+LV KG IEY+D +EEETTMISMTI +LV+ R NPE AY++TYTH Sbjct: 534 RALQQRESPEEGGWHDLVAKGFIEYVDTEEEETTMISMTINDLVSARLNPEEAYSDTYTH 593 Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM Sbjct: 594 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 642 Score = 26.6 bits (57), Expect(2) = 2e-69 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 643 DTLAYVLYYPQK 654 >gb|AAW22929.1| RNA polymerase II second largest subunit [Musa velutina] Length = 561 Score = 262 bits (669), Expect(2) = 2e-69 Identities = 121/168 (72%), Positives = 146/168 (86%), Gaps = 2/168 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P++LV+TL+ LRRQ+ +N+E+G++RDI +ELR+YTD+GRC+RPLF+V++Q LLIKK D+ Sbjct: 63 PDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI 122 Query: 186 ERLQS--DPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTHC 359 LQ PE GWH+LV KG IEY+D +EEETTMISMTI +LV R+NPE AY+ TYTHC Sbjct: 123 RALQQRETPEEGWHDLVSKGFIEYIDTEEEETTMISMTINDLVNARQNPEEAYSETYTHC 182 Query: 360 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM Sbjct: 183 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 230 Score = 26.6 bits (57), Expect(2) = 2e-69 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 231 DTLAYVLYYPQK 242 >gb|AAB94063.1| RPB140 [Ginkgo biloba] Length = 555 Score = 263 bits (673), Expect(2) = 2e-69 Identities = 124/168 (73%), Positives = 148/168 (88%), Gaps = 2/168 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P++LV+TL+ LRRQV +N+E+G+VRDI RELR+YTD+GRC+RPLF+V++Q LLIKK+D+ Sbjct: 75 PDLLVKTLRQLRRQVDVNTEVGVVRDIRLRELRLYTDYGRCSRPLFIVEKQRLLIKKADI 134 Query: 186 ERLQS--DPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTHC 359 LQ PE GWH+LV KG IEY+D +EEETTMISMTI +LVT R NPE AY++TYTHC Sbjct: 135 RALQQREGPEEGWHDLVAKGFIEYVDTEEEETTMISMTISDLVTARNNPEEAYSHTYTHC 194 Query: 360 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 EIHPSLILGVCASIIPFPDH+QSPRNTYQSAMGKQAMGIY +NYQLRM Sbjct: 195 EIHPSLILGVCASIIPFPDHDQSPRNTYQSAMGKQAMGIYVTNYQLRM 242 Score = 25.0 bits (53), Expect(2) = 2e-69 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL +VL+YPQK Sbjct: 243 DTLAFVLYYPQK 254 >gb|AAS86820.1| RNA polymerase II second largest subunit, partial [Trochodendron aralioides] Length = 547 Score = 262 bits (669), Expect(2) = 2e-69 Identities = 121/168 (72%), Positives = 146/168 (86%), Gaps = 2/168 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P LV+TL+ LRR+V +N+E+G++RDI +ELR+YTD+GRC+RPLF+V++Q LLIKK D+ Sbjct: 67 PEFLVKTLRQLRRRVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI 126 Query: 186 ERLQS--DPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTHC 359 + LQ PEGGWH+LV KG IEY+D +EEETTMISMTI +L+T + NPE AY+ TYTHC Sbjct: 127 QALQQRESPEGGWHDLVAKGYIEYVDTEEEETTMISMTINDLITAKVNPEEAYSETYTHC 186 Query: 360 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM Sbjct: 187 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 234 Score = 26.6 bits (57), Expect(2) = 2e-69 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 235 DTLAYVLYYPQK 246 >ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cicer arietinum] Length = 1194 Score = 261 bits (668), Expect(2) = 3e-69 Identities = 124/169 (73%), Positives = 145/169 (85%), Gaps = 3/169 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P++LV TL+ LRR+V +N+E+G+VRDI +ELRIYTD+GRC+RPLF+VD+Q LLIKK D+ Sbjct: 586 PDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDI 645 Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356 LQ S EGGWH+LV KG IEY+D +EEETTMISMTI +LV R NPE AY++TYTH Sbjct: 646 HSLQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTH 705 Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQ RM Sbjct: 706 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRM 754 Score = 26.6 bits (57), Expect(2) = 3e-69 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 755 DTLAYVLYYPQK 766 >gb|AAW22908.1| RNA polymerase II second largest subunit [Dacrydium cupressinum] Length = 498 Score = 261 bits (668), Expect(2) = 3e-69 Identities = 122/166 (73%), Positives = 141/166 (84%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P +LV TL+ LRRQV +N E+G+VRDI RELR+YTD+GRC+RPLFVV +Q L+IKK D+ Sbjct: 32 PELLVRTLRQLRRQVDVNPEVGVVRDIRLRELRLYTDYGRCSRPLFVVKKQRLIIKKRDI 91 Query: 186 ERLQSDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTHCEI 365 L +PE GWH+L+ KG IEY+D EEETTMISMTI +LV R NPE AY++TYTHCEI Sbjct: 92 NELWQNPEDGWHDLITKGFIEYVDTXEEETTMISMTINDLVNARTNPEDAYSHTYTHCEI 151 Query: 366 HPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 HPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM Sbjct: 152 HPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 197 Score = 26.6 bits (57), Expect(2) = 3e-69 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 198 DTLAYVLYYPQK 209 >gb|ESW20162.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris] Length = 1194 Score = 261 bits (667), Expect(2) = 4e-69 Identities = 124/169 (73%), Positives = 145/169 (85%), Gaps = 3/169 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P++LV TL+ LRR+V +N+E+G+VRDI +ELRIYTD+GRC+RPLF+VD+Q LLIKK D+ Sbjct: 586 PDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKRDI 645 Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356 LQ S EGGWH+LV KG IEY+D +EEETTMISMTI +LV R NPE AY++TYTH Sbjct: 646 HALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEDAYSDTYTH 705 Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQ RM Sbjct: 706 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRM 754 Score = 26.6 bits (57), Expect(2) = 4e-69 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 755 DTLAYVLYYPQK 766 >ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine max] Length = 1192 Score = 261 bits (667), Expect(2) = 4e-69 Identities = 124/169 (73%), Positives = 145/169 (85%), Gaps = 3/169 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P++LV TLK LRR+V +N+E+G+VRDI +ELRIYTD+GRC+RPLF+VD+Q LLIKK D+ Sbjct: 586 PDMLVRTLKKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDI 645 Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356 LQ S +GGWH+LV KG IEY+D +EEETTMISMTI +LV R NPE AY++TYTH Sbjct: 646 HALQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYSDTYTH 705 Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQ RM Sbjct: 706 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRM 754 Score = 26.6 bits (57), Expect(2) = 4e-69 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 755 DTLAYVLYYPQK 766 >ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [Amborella trichopoda] gi|548863150|gb|ERN20505.1| hypothetical protein AMTR_s00068p00181410 [Amborella trichopoda] Length = 1190 Score = 261 bits (667), Expect(2) = 4e-69 Identities = 122/168 (72%), Positives = 146/168 (86%), Gaps = 2/168 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P +LV+TL+ LRRQV +N+E+G++RDI +ELR+YTD+GRC+RPLF+V++Q LLIKKSD+ Sbjct: 579 PELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKSDI 638 Query: 186 ERLQS--DPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTHC 359 LQ P+ GWH+LV KG IEY+D +EEETTMISMTI +LV+ R NPE AY+ TYTHC Sbjct: 639 RALQQRESPDEGWHDLVAKGFIEYVDTEEEETTMISMTISDLVSARLNPEEAYSETYTHC 698 Query: 360 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM Sbjct: 699 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 746 Score = 26.6 bits (57), Expect(2) = 4e-69 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 747 DTLAYVLYYPQK 758 >gb|AAY85199.1| RNA polymerase II second largest subunit [Cissus tuberosa] Length = 951 Score = 261 bits (667), Expect(2) = 4e-69 Identities = 122/169 (72%), Positives = 147/169 (86%), Gaps = 3/169 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P++LV+TL+ LRRQV +N+E+G++RDI +ELR+YTD+GRC+RPLF+V++Q LLIKK D+ Sbjct: 479 PDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI 538 Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356 LQ S +GGWH+LV KG IEY+D +EEETTMISMTI +LV+ R NPE AY+ TYTH Sbjct: 539 RALQLRESPEDGGWHDLVSKGFIEYVDTEEEETTMISMTINDLVSARLNPEEAYSETYTH 598 Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM Sbjct: 599 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 647 Score = 26.6 bits (57), Expect(2) = 4e-69 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 648 DTLAYVLYYPQK 659 >gb|AAY85208.1| RNA polymerase II second largest subunit [Euptelea polyandra] Length = 874 Score = 261 bits (667), Expect(2) = 4e-69 Identities = 122/169 (72%), Positives = 146/169 (86%), Gaps = 3/169 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P +LV+TL+ LRRQV +N+E+G++RDI +ELR+YTD+GRC+RPLF+V++Q LLIKK D+ Sbjct: 479 PELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI 538 Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356 LQ S +GGWH+LV KG IEY+D +EEETTMISMTI +L+T R NPE AY+ TYTH Sbjct: 539 RALQQRESPDDGGWHDLVAKGFIEYVDTEEEETTMISMTINDLITARINPEEAYSETYTH 598 Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM Sbjct: 599 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 647 Score = 26.6 bits (57), Expect(2) = 4e-69 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 648 DTLAYVLYYPQK 659 >gb|AAY85203.1| RNA polymerase II second largest subunit [Dicentra formosa] Length = 873 Score = 261 bits (667), Expect(2) = 4e-69 Identities = 123/169 (72%), Positives = 147/169 (86%), Gaps = 3/169 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P +LV+TL++LRRQV +N+E+G++RDI +ELR+YTD+GRC+RPLF+V++Q LLIKK D+ Sbjct: 479 PELLVKTLRALRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKRDI 538 Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356 LQ S EGGWH+LV KG IEY+D +EEETTMISMTI +LV+ R NPE AY+ TYTH Sbjct: 539 RALQLRESPDEGGWHDLVAKGYIEYVDTEEEETTMISMTINDLVSARLNPEEAYSETYTH 598 Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM Sbjct: 599 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 647 Score = 26.6 bits (57), Expect(2) = 4e-69 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 648 DTLAYVLYYPQK 659 >gb|AAW22922.1| RNA polymerase II second largest subunit [Amborella trichopoda] Length = 516 Score = 261 bits (667), Expect(2) = 4e-69 Identities = 122/168 (72%), Positives = 146/168 (86%), Gaps = 2/168 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P +LV+TL+ LRRQV +N+E+G++RDI +ELR+YTD+GRC+RPLF+V++Q LLIKKSD+ Sbjct: 42 PELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKSDI 101 Query: 186 ERLQS--DPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTHC 359 LQ P+ GWH+LV KG IEY+D +EEETTMISMTI +LV+ R NPE AY+ TYTHC Sbjct: 102 RALQQRESPDEGWHDLVAKGFIEYVDTEEEETTMISMTISDLVSARLNPEEAYSETYTHC 161 Query: 360 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM Sbjct: 162 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 209 Score = 26.6 bits (57), Expect(2) = 4e-69 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 210 DTLAYVLYYPQK 221 >gb|ESW10701.1| hypothetical protein PHAVU_009G230400g [Phaseolus vulgaris] Length = 1196 Score = 261 bits (666), Expect(2) = 5e-69 Identities = 124/169 (73%), Positives = 144/169 (85%), Gaps = 3/169 (1%) Frame = +3 Query: 6 PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185 P++LV TL+ LRR+V +N+E+G+VRDI +ELRIYTD+GRC+RPLF+VD Q LLIKK D+ Sbjct: 584 PDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDRQRLLIKKKDI 643 Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356 LQ S EGGWH+LV KG IEY+D +EEETTMISMTI +LV R NPE AY++TYTH Sbjct: 644 HALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEEAYSDTYTH 703 Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQ RM Sbjct: 704 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRM 752 Score = 26.6 bits (57), Expect(2) = 5e-69 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +2 Query: 521 DTLGYVLFYPQK 556 DTL YVL+YPQK Sbjct: 753 DTLAYVLYYPQK 764