BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00026597
         (557 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS86818.1| RNA polymerase II second largest subunit, partial...   270   6e-72
gb|AAY85190.1| RNA polymerase II second largest subunit [Aextoxi...   264   6e-70
gb|AAW22905.1| RNA polymerase II second largest subunit [Welwits...   264   6e-70
gb|AAY85223.1| RNA polymerase II second largest subunit [Nelumbo...   263   7e-70
gb|AAY85216.1| RNA polymerase II second largest subunit [Hibbert...   263   1e-69
gb|AFV74907.1| RNA polymerase II second largest subunit, partial...   263   1e-69
gb|AAY85204.1| RNA polymerase II second largest subunit [Dilleni...   262   2e-69
gb|AAW22929.1| RNA polymerase II second largest subunit [Musa ve...   262   2e-69
gb|AAB94063.1| RPB140 [Ginkgo biloba]                                 263   2e-69
gb|AAS86820.1| RNA polymerase II second largest subunit, partial...   262   2e-69
ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su...   261   3e-69
gb|AAW22908.1| RNA polymerase II second largest subunit [Dacrydi...   261   3e-69
gb|ESW20162.1| hypothetical protein PHAVU_006G185800g [Phaseolus...   261   4e-69
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su...   261   4e-69
ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [A...   261   4e-69
gb|AAY85199.1| RNA polymerase II second largest subunit [Cissus ...   261   4e-69
gb|AAY85208.1| RNA polymerase II second largest subunit [Euptele...   261   4e-69
gb|AAY85203.1| RNA polymerase II second largest subunit [Dicentr...   261   4e-69
gb|AAW22922.1| RNA polymerase II second largest subunit [Amborel...   261   4e-69
gb|ESW10701.1| hypothetical protein PHAVU_009G230400g [Phaseolus...   261   5e-69

>gb|AAS86818.1| RNA polymerase II second largest subunit, partial [Gnetum gnemon]
          Length = 546

 Score =  270 bits (691), Expect(2) = 6e-72
 Identities = 129/168 (76%), Positives = 148/168 (88%), Gaps = 2/168 (1%)
 Frame = +3

Query: 6   PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
           P  LV+TLK LRRQV +N E+G+VRDIP RELR+YTD+GRC+RPLFVV++Q LLIKK+D+
Sbjct: 68  PETLVKTLKQLRRQVDVNPEVGVVRDIPLRELRLYTDYGRCSRPLFVVEKQQLLIKKADI 127

Query: 186 ERLQS--DPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTHC 359
            RLQ    PE GWH+LV KG IEY+D +EEETTMISMTI +LV +RKNP+ AY+NTYTHC
Sbjct: 128 IRLQERVSPEEGWHDLVAKGFIEYVDTEEEETTMISMTITDLVQSRKNPKEAYSNTYTHC 187

Query: 360 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
           EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM
Sbjct: 188 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 235



 Score = 26.6 bits (57), Expect(2) = 6e-72
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 236 DTLAYVLYYPQK 247


>gb|AAY85190.1| RNA polymerase II second largest subunit [Aextoxicon punctatum]
          Length = 873

 Score =  264 bits (674), Expect(2) = 6e-70
 Identities = 123/169 (72%), Positives = 148/169 (87%), Gaps = 3/169 (1%)
 Frame = +3

Query: 6   PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
           P++LV+TL+ LRRQV +N+E+G++RDI  +ELR+YTD+GRC+RPLF+V++Q LLIKK D+
Sbjct: 479 PDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI 538

Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356
           + LQ   S  EGGWH+LV KG IEY+D +EEETTMISMTI +L+T R NPE AY+ TYTH
Sbjct: 539 QALQQRESHEEGGWHDLVAKGFIEYVDTEEEETTMISMTINDLITARLNPEEAYSETYTH 598

Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
           CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM
Sbjct: 599 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 647



 Score = 26.6 bits (57), Expect(2) = 6e-70
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 648 DTLAYVLYYPQK 659


>gb|AAW22905.1| RNA polymerase II second largest subunit [Welwitschia mirabilis]
          Length = 553

 Score =  264 bits (674), Expect(2) = 6e-70
 Identities = 127/168 (75%), Positives = 145/168 (86%), Gaps = 2/168 (1%)
 Frame = +3

Query: 6   PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
           P  LV+TLK LRRQV +N E+G+VRDIP RELR+YTD+GRC+RPLFVV++Q LLIKKS +
Sbjct: 75  PETLVKTLKQLRRQVDVNPEVGVVRDIPLRELRLYTDYGRCSRPLFVVEKQQLLIKKSHI 134

Query: 186 ERLQS--DPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTHC 359
            RLQ    P+ GWH+LV KG IEY+D +EEETTMISMTI +LV  RKNP  AY++TYTHC
Sbjct: 135 IRLQERMSPDEGWHDLVAKGFIEYVDTEEEETTMISMTITDLVQARKNPLEAYSHTYTHC 194

Query: 360 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
           EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM
Sbjct: 195 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 242



 Score = 26.6 bits (57), Expect(2) = 6e-70
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 243 DTLAYVLYYPQK 254


>gb|AAY85223.1| RNA polymerase II second largest subunit [Nelumbo nucifera]
          Length = 865

 Score =  263 bits (673), Expect(2) = 7e-70
 Identities = 124/169 (73%), Positives = 146/169 (86%), Gaps = 3/169 (1%)
 Frame = +3

Query: 6   PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
           P +LV+TL+ LRRQV +N+E+G++RDI  +ELR+YTD+GRC+RPLF+V++Q LLIKK D+
Sbjct: 471 PELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI 530

Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356
             LQ   S  EGGWH+LV KG IEY+D +EEETTMISMTI +LVT R NPE AY+ TYTH
Sbjct: 531 RALQQRESSEEGGWHDLVAKGFIEYVDTEEEETTMISMTINDLVTARLNPEEAYSETYTH 590

Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
           CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM
Sbjct: 591 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 639



 Score = 26.6 bits (57), Expect(2) = 7e-70
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 640 DTLAYVLYYPQK 651


>gb|AAY85216.1| RNA polymerase II second largest subunit [Hibbertia scandens]
          Length = 873

 Score =  263 bits (671), Expect(2) = 1e-69
 Identities = 123/169 (72%), Positives = 148/169 (87%), Gaps = 3/169 (1%)
 Frame = +3

Query: 6   PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
           P++LV+TL+ LRRQV +N+E+G++RDI  +ELR+YTD+GRC+RPLF+V++Q LLIKK D+
Sbjct: 479 PDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI 538

Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356
             LQ   S  +GGWH+LV KG IEY+D +EEETTMISMTI +LVT R NPE AY++TYTH
Sbjct: 539 RALQQRESPEDGGWHDLVAKGFIEYVDTEEEETTMISMTINDLVTARLNPEEAYSDTYTH 598

Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
           CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM
Sbjct: 599 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 647



 Score = 26.6 bits (57), Expect(2) = 1e-69
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 648 DTLAYVLYYPQK 659


>gb|AFV74907.1| RNA polymerase II second largest subunit, partial [Olax imbricata]
          Length = 568

 Score =  263 bits (671), Expect(2) = 1e-69
 Identities = 125/169 (73%), Positives = 146/169 (86%), Gaps = 3/169 (1%)
 Frame = +3

Query: 6   PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
           P++LV TL+ LRR+V +N+E+G+VRDI  +ELRIYTD+GRC+RPLF+V++Q LLIKK D+
Sbjct: 62  PDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI 121

Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356
           + LQ   S  EGGWH+LV KG IEY+D +EEETTMISMTI +LVT R NPE AYT TYTH
Sbjct: 122 QALQQRESAEEGGWHDLVAKGFIEYIDTEEEETTMISMTINDLVTARINPEEAYTETYTH 181

Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
           CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQ RM
Sbjct: 182 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRM 230



 Score = 26.6 bits (57), Expect(2) = 1e-69
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 231 DTLAYVLYYPQK 242


>gb|AAY85204.1| RNA polymerase II second largest subunit [Dillenia suffruticosa]
          Length = 868

 Score =  262 bits (670), Expect(2) = 2e-69
 Identities = 123/169 (72%), Positives = 148/169 (87%), Gaps = 3/169 (1%)
 Frame = +3

Query: 6   PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
           P++LV+TL+ LRRQV +N+E+G++RDI  +ELR+YTD+GRC+RPLF+V++Q LLIKK D+
Sbjct: 474 PDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI 533

Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356
             LQ   S  EGGWH+LV KG IEY+D +EEETTMISMTI +LV+ R NPE AY++TYTH
Sbjct: 534 RALQQRESPEEGGWHDLVAKGFIEYVDTEEEETTMISMTINDLVSARLNPEEAYSDTYTH 593

Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
           CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM
Sbjct: 594 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 642



 Score = 26.6 bits (57), Expect(2) = 2e-69
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 643 DTLAYVLYYPQK 654


>gb|AAW22929.1| RNA polymerase II second largest subunit [Musa velutina]
          Length = 561

 Score =  262 bits (669), Expect(2) = 2e-69
 Identities = 121/168 (72%), Positives = 146/168 (86%), Gaps = 2/168 (1%)
 Frame = +3

Query: 6   PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
           P++LV+TL+ LRRQ+ +N+E+G++RDI  +ELR+YTD+GRC+RPLF+V++Q LLIKK D+
Sbjct: 63  PDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI 122

Query: 186 ERLQS--DPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTHC 359
             LQ    PE GWH+LV KG IEY+D +EEETTMISMTI +LV  R+NPE AY+ TYTHC
Sbjct: 123 RALQQRETPEEGWHDLVSKGFIEYIDTEEEETTMISMTINDLVNARQNPEEAYSETYTHC 182

Query: 360 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
           EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM
Sbjct: 183 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 230



 Score = 26.6 bits (57), Expect(2) = 2e-69
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 231 DTLAYVLYYPQK 242


>gb|AAB94063.1| RPB140 [Ginkgo biloba]
          Length = 555

 Score =  263 bits (673), Expect(2) = 2e-69
 Identities = 124/168 (73%), Positives = 148/168 (88%), Gaps = 2/168 (1%)
 Frame = +3

Query: 6   PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
           P++LV+TL+ LRRQV +N+E+G+VRDI  RELR+YTD+GRC+RPLF+V++Q LLIKK+D+
Sbjct: 75  PDLLVKTLRQLRRQVDVNTEVGVVRDIRLRELRLYTDYGRCSRPLFIVEKQRLLIKKADI 134

Query: 186 ERLQS--DPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTHC 359
             LQ    PE GWH+LV KG IEY+D +EEETTMISMTI +LVT R NPE AY++TYTHC
Sbjct: 135 RALQQREGPEEGWHDLVAKGFIEYVDTEEEETTMISMTISDLVTARNNPEEAYSHTYTHC 194

Query: 360 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
           EIHPSLILGVCASIIPFPDH+QSPRNTYQSAMGKQAMGIY +NYQLRM
Sbjct: 195 EIHPSLILGVCASIIPFPDHDQSPRNTYQSAMGKQAMGIYVTNYQLRM 242



 Score = 25.0 bits (53), Expect(2) = 2e-69
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL +VL+YPQK
Sbjct: 243 DTLAFVLYYPQK 254


>gb|AAS86820.1| RNA polymerase II second largest subunit, partial [Trochodendron
           aralioides]
          Length = 547

 Score =  262 bits (669), Expect(2) = 2e-69
 Identities = 121/168 (72%), Positives = 146/168 (86%), Gaps = 2/168 (1%)
 Frame = +3

Query: 6   PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
           P  LV+TL+ LRR+V +N+E+G++RDI  +ELR+YTD+GRC+RPLF+V++Q LLIKK D+
Sbjct: 67  PEFLVKTLRQLRRRVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI 126

Query: 186 ERLQS--DPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTHC 359
           + LQ    PEGGWH+LV KG IEY+D +EEETTMISMTI +L+T + NPE AY+ TYTHC
Sbjct: 127 QALQQRESPEGGWHDLVAKGYIEYVDTEEEETTMISMTINDLITAKVNPEEAYSETYTHC 186

Query: 360 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
           EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM
Sbjct: 187 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 234



 Score = 26.6 bits (57), Expect(2) = 2e-69
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 235 DTLAYVLYYPQK 246


>ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cicer
            arietinum]
          Length = 1194

 Score =  261 bits (668), Expect(2) = 3e-69
 Identities = 124/169 (73%), Positives = 145/169 (85%), Gaps = 3/169 (1%)
 Frame = +3

Query: 6    PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
            P++LV TL+ LRR+V +N+E+G+VRDI  +ELRIYTD+GRC+RPLF+VD+Q LLIKK D+
Sbjct: 586  PDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDI 645

Query: 186  ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356
              LQ   S  EGGWH+LV KG IEY+D +EEETTMISMTI +LV  R NPE AY++TYTH
Sbjct: 646  HSLQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTH 705

Query: 357  CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
            CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQ RM
Sbjct: 706  CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRM 754



 Score = 26.6 bits (57), Expect(2) = 3e-69
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 755 DTLAYVLYYPQK 766


>gb|AAW22908.1| RNA polymerase II second largest subunit [Dacrydium cupressinum]
          Length = 498

 Score =  261 bits (668), Expect(2) = 3e-69
 Identities = 122/166 (73%), Positives = 141/166 (84%)
 Frame = +3

Query: 6   PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
           P +LV TL+ LRRQV +N E+G+VRDI  RELR+YTD+GRC+RPLFVV +Q L+IKK D+
Sbjct: 32  PELLVRTLRQLRRQVDVNPEVGVVRDIRLRELRLYTDYGRCSRPLFVVKKQRLIIKKRDI 91

Query: 186 ERLQSDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTHCEI 365
             L  +PE GWH+L+ KG IEY+D  EEETTMISMTI +LV  R NPE AY++TYTHCEI
Sbjct: 92  NELWQNPEDGWHDLITKGFIEYVDTXEEETTMISMTINDLVNARTNPEDAYSHTYTHCEI 151

Query: 366 HPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
           HPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM
Sbjct: 152 HPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 197



 Score = 26.6 bits (57), Expect(2) = 3e-69
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 198 DTLAYVLYYPQK 209


>gb|ESW20162.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris]
          Length = 1194

 Score =  261 bits (667), Expect(2) = 4e-69
 Identities = 124/169 (73%), Positives = 145/169 (85%), Gaps = 3/169 (1%)
 Frame = +3

Query: 6    PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
            P++LV TL+ LRR+V +N+E+G+VRDI  +ELRIYTD+GRC+RPLF+VD+Q LLIKK D+
Sbjct: 586  PDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKRDI 645

Query: 186  ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356
              LQ   S  EGGWH+LV KG IEY+D +EEETTMISMTI +LV  R NPE AY++TYTH
Sbjct: 646  HALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEDAYSDTYTH 705

Query: 357  CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
            CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQ RM
Sbjct: 706  CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRM 754



 Score = 26.6 bits (57), Expect(2) = 4e-69
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 755 DTLAYVLYYPQK 766


>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
            max]
          Length = 1192

 Score =  261 bits (667), Expect(2) = 4e-69
 Identities = 124/169 (73%), Positives = 145/169 (85%), Gaps = 3/169 (1%)
 Frame = +3

Query: 6    PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
            P++LV TLK LRR+V +N+E+G+VRDI  +ELRIYTD+GRC+RPLF+VD+Q LLIKK D+
Sbjct: 586  PDMLVRTLKKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDI 645

Query: 186  ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356
              LQ   S  +GGWH+LV KG IEY+D +EEETTMISMTI +LV  R NPE AY++TYTH
Sbjct: 646  HALQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYSDTYTH 705

Query: 357  CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
            CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQ RM
Sbjct: 706  CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRM 754



 Score = 26.6 bits (57), Expect(2) = 4e-69
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 755 DTLAYVLYYPQK 766


>ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [Amborella trichopoda]
            gi|548863150|gb|ERN20505.1| hypothetical protein
            AMTR_s00068p00181410 [Amborella trichopoda]
          Length = 1190

 Score =  261 bits (667), Expect(2) = 4e-69
 Identities = 122/168 (72%), Positives = 146/168 (86%), Gaps = 2/168 (1%)
 Frame = +3

Query: 6    PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
            P +LV+TL+ LRRQV +N+E+G++RDI  +ELR+YTD+GRC+RPLF+V++Q LLIKKSD+
Sbjct: 579  PELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKSDI 638

Query: 186  ERLQS--DPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTHC 359
              LQ    P+ GWH+LV KG IEY+D +EEETTMISMTI +LV+ R NPE AY+ TYTHC
Sbjct: 639  RALQQRESPDEGWHDLVAKGFIEYVDTEEEETTMISMTISDLVSARLNPEEAYSETYTHC 698

Query: 360  EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
            EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM
Sbjct: 699  EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 746



 Score = 26.6 bits (57), Expect(2) = 4e-69
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 747 DTLAYVLYYPQK 758


>gb|AAY85199.1| RNA polymerase II second largest subunit [Cissus tuberosa]
          Length = 951

 Score =  261 bits (667), Expect(2) = 4e-69
 Identities = 122/169 (72%), Positives = 147/169 (86%), Gaps = 3/169 (1%)
 Frame = +3

Query: 6   PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
           P++LV+TL+ LRRQV +N+E+G++RDI  +ELR+YTD+GRC+RPLF+V++Q LLIKK D+
Sbjct: 479 PDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI 538

Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356
             LQ   S  +GGWH+LV KG IEY+D +EEETTMISMTI +LV+ R NPE AY+ TYTH
Sbjct: 539 RALQLRESPEDGGWHDLVSKGFIEYVDTEEEETTMISMTINDLVSARLNPEEAYSETYTH 598

Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
           CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM
Sbjct: 599 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 647



 Score = 26.6 bits (57), Expect(2) = 4e-69
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 648 DTLAYVLYYPQK 659


>gb|AAY85208.1| RNA polymerase II second largest subunit [Euptelea polyandra]
          Length = 874

 Score =  261 bits (667), Expect(2) = 4e-69
 Identities = 122/169 (72%), Positives = 146/169 (86%), Gaps = 3/169 (1%)
 Frame = +3

Query: 6   PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
           P +LV+TL+ LRRQV +N+E+G++RDI  +ELR+YTD+GRC+RPLF+V++Q LLIKK D+
Sbjct: 479 PELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI 538

Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356
             LQ   S  +GGWH+LV KG IEY+D +EEETTMISMTI +L+T R NPE AY+ TYTH
Sbjct: 539 RALQQRESPDDGGWHDLVAKGFIEYVDTEEEETTMISMTINDLITARINPEEAYSETYTH 598

Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
           CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM
Sbjct: 599 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 647



 Score = 26.6 bits (57), Expect(2) = 4e-69
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 648 DTLAYVLYYPQK 659


>gb|AAY85203.1| RNA polymerase II second largest subunit [Dicentra formosa]
          Length = 873

 Score =  261 bits (667), Expect(2) = 4e-69
 Identities = 123/169 (72%), Positives = 147/169 (86%), Gaps = 3/169 (1%)
 Frame = +3

Query: 6   PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
           P +LV+TL++LRRQV +N+E+G++RDI  +ELR+YTD+GRC+RPLF+V++Q LLIKK D+
Sbjct: 479 PELLVKTLRALRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKRDI 538

Query: 186 ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356
             LQ   S  EGGWH+LV KG IEY+D +EEETTMISMTI +LV+ R NPE AY+ TYTH
Sbjct: 539 RALQLRESPDEGGWHDLVAKGYIEYVDTEEEETTMISMTINDLVSARLNPEEAYSETYTH 598

Query: 357 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
           CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM
Sbjct: 599 CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 647



 Score = 26.6 bits (57), Expect(2) = 4e-69
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 648 DTLAYVLYYPQK 659


>gb|AAW22922.1| RNA polymerase II second largest subunit [Amborella trichopoda]
          Length = 516

 Score =  261 bits (667), Expect(2) = 4e-69
 Identities = 122/168 (72%), Positives = 146/168 (86%), Gaps = 2/168 (1%)
 Frame = +3

Query: 6   PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
           P +LV+TL+ LRRQV +N+E+G++RDI  +ELR+YTD+GRC+RPLF+V++Q LLIKKSD+
Sbjct: 42  PELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKSDI 101

Query: 186 ERLQS--DPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTHC 359
             LQ    P+ GWH+LV KG IEY+D +EEETTMISMTI +LV+ R NPE AY+ TYTHC
Sbjct: 102 RALQQRESPDEGWHDLVAKGFIEYVDTEEEETTMISMTISDLVSARLNPEEAYSETYTHC 161

Query: 360 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
           EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQLRM
Sbjct: 162 EIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRM 209



 Score = 26.6 bits (57), Expect(2) = 4e-69
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 210 DTLAYVLYYPQK 221


>gb|ESW10701.1| hypothetical protein PHAVU_009G230400g [Phaseolus vulgaris]
          Length = 1196

 Score =  261 bits (666), Expect(2) = 5e-69
 Identities = 124/169 (73%), Positives = 144/169 (85%), Gaps = 3/169 (1%)
 Frame = +3

Query: 6    PNVLVETLKSLRRQVAINSEIGIVRDIPQRELRIYTDWGRCTRPLFVVDEQHLLIKKSDV 185
            P++LV TL+ LRR+V +N+E+G+VRDI  +ELRIYTD+GRC+RPLF+VD Q LLIKK D+
Sbjct: 584  PDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDRQRLLIKKKDI 643

Query: 186  ERLQ---SDPEGGWHNLVKKGLIEYLDAQEEETTMISMTIQNLVTTRKNPETAYTNTYTH 356
              LQ   S  EGGWH+LV KG IEY+D +EEETTMISMTI +LV  R NPE AY++TYTH
Sbjct: 644  HALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEEAYSDTYTH 703

Query: 357  CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNYQLRM 503
            CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIY +NYQ RM
Sbjct: 704  CEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRM 752



 Score = 26.6 bits (57), Expect(2) = 5e-69
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 521 DTLGYVLFYPQK 556
           DTL YVL+YPQK
Sbjct: 753 DTLAYVLYYPQK 764